View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3210-Insertion-13 (Length: 388)
Name: NF3210-Insertion-13
Description: NF3210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3210-Insertion-13 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 8 - 388
Target Start/End: Complemental strand, 34218369 - 34217983
Alignment:
| Q |
8 |
gtgcttttgtttatttatagttcatacaaccatatgatgattggttatgttattcaaacatatcatttcaagcttaactgtagtggtcccttagggttgt |
107 |
Q |
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| T |
34218369 |
gtgcttttgtttatttatagttcatacaaccatatgatgattggttatgttattcaaacatatcatttcaagcttaactgtagtggtcccttagggttgt |
34218270 |
T |
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| Q |
108 |
atctcaaaagtttaattatagtaacgtgtcctgcttctctaatgacaaattctcattaatgttgttgttggtttgtgtatgtgtact------aagaaga |
201 |
Q |
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| T |
34218269 |
atctcaaaagtttaattatagtaacgtgtcctgcttctctaatgacaaattctcattaatgttgttgttggtttgtgtatgtgtactaagagaaagatga |
34218170 |
T |
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| Q |
202 |
gtgtaccctcttatgtcatggttgatgtaatatttgtggtgggaaaatcacaatcatttgagcgtgccctaaaattaacttcaaataactagagagtata |
301 |
Q |
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| T |
34218169 |
gtgtaccctcttatgtcatggttgatgtaatatttgtggtgggaaaatcacaatcatttgagcgtgccctaaaattaacttcaaataactagagagtata |
34218070 |
T |
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| Q |
302 |
gccaatgtttgttttcaaggttgaatttgtgatgaaaattttattttattgagaaaattttcttttagtatcttggatttcttccca |
388 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34218069 |
gccaatgtttgttttcaaggttgaatttgtgatgaaaattttattttattgagaaaattttcttttagtatcttggatttcttccca |
34217983 |
T |
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