View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3211_low_23 (Length: 267)
Name: NF3211_low_23
Description: NF3211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3211_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 14093065 - 14092838
Alignment:
| Q |
27 |
aattatcaagataaaaacaaaaattgtaagttggaaaaataggcaatatgacaatattcaaaatggaaacactcaattttaatcaatttccattttctcg |
126 |
Q |
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| T |
14093065 |
aattatcaagataaaaacaaaaactataagttggaaaaataggcaatatgacaatattcaaaatggaaacactcaattttaatcaatttccattttctcg |
14092966 |
T |
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| Q |
127 |
attgaccacaaaataaacaatattaaaaattaaattaccatatcgatagagcatctactgcaatctctgcatttggaagattcccggtcattaatatcag |
226 |
Q |
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| T |
14092965 |
attgaccacaaaataaacaatattaaaaattaaattaccatatggatagagcatctactgcaatctctgcatttggaagattcccggtcattaatatcag |
14092866 |
T |
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| Q |
227 |
aattctataataccaattctccaaactg |
254 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
14092865 |
aattctataataccaattctccaaactg |
14092838 |
T |
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