View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3211_low_34 (Length: 243)
Name: NF3211_low_34
Description: NF3211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3211_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 35167644 - 35167871
Alignment:
| Q |
1 |
gagtgatggaaataccaaaaccaaaagagttcaatagggtttggttgacatatgcaagtgatgagaatgagaggttttatggttttggggaacagttttc |
100 |
Q |
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| T |
35167644 |
gagtgatggaaataccaaaaccaaaagagttcaatagggtttggttgacatatgcaagtgatgagaatgagaggttttatggttttggggaacagttttc |
35167743 |
T |
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| Q |
101 |
tcatatgaatttcaaggggaaaagggtgcctattttagttcaagaacaaggtatcggaagaggtgatcaacctatcactttagctgctaacttggttagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35167744 |
tcatatgaatttcaaggggaaaagggtgcctattttagttcaagaacaaggtatcggaagaggtgatcaacctatcactttagctgctaacttggttagt |
35167843 |
T |
|
| Q |
201 |
tacaggtagaacaatgcaactgcttcat |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
35167844 |
tacaggtagaacaatgcaactgcttcat |
35167871 |
T |
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