View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3212R-Insertion-13 (Length: 256)
Name: NF3212R-Insertion-13
Description: NF3212R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3212R-Insertion-13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 80 - 256
Target Start/End: Original strand, 32605368 - 32605544
Alignment:
| Q |
80 |
gccacctacaacatcggcgtcaactacggcaccatcgccaacaacctcccaccacccacaaccgtcgccactttcctcaaaacccaaaccacaatcaccc |
179 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32605368 |
gccacctacaacatcggcgtcaactacggcaccatcgccaacaacctcccaccacccacaaccgtcgccactttcctcaaaacccaaaccacaatcaccc |
32605467 |
T |
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| Q |
180 |
acattaaaatcttcgacacaaactcttccatccttcgtgccttcgccaatacaaacatctccgtcaccgtaactgtc |
256 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
32605468 |
acattaaaatcttcgacacaaactcttccatcctccgtgccttcgccaatacaaacatctccgtcaccgtaactgtc |
32605544 |
T |
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