View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3212_1D_low_13 (Length: 274)
Name: NF3212_1D_low_13
Description: NF3212_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3212_1D_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 32605493 - 32605762
Alignment:
| Q |
1 |
ttccatccttcgtgccttcgccaatacaaacatctccgtcaccgtaactgtctccaacgccgacatcccttccctcacaaaactcccctccgctcaaaaa |
100 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32605493 |
ttccatcctccgtgccttcgccaatacaaacatctccgtcaccgtaactgtctccaacgccgacatcccttccctcacaaaactcccctccgctcaaaaa |
32605592 |
T |
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| Q |
101 |
tggatcaccaccaacatcctccctttccaccccaaaaccatcttcaaccgtatcgccgtcggtaacgaaatcctcgcaacttcagacaaaaccttaatag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32605593 |
tggatcaccaccaacatcctccctttccaccccaaaaccatcttcaaccgtatcgccgtcggtaacgaaatcctcgcaacttcagacaaaaccttaatag |
32605692 |
T |
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| Q |
201 |
cacacattcttccggccatgaatgcacttcatcaagctctcactctttcaaatctcactcacattcaaat |
270 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32605693 |
cacacattcttcctgccatgaatgcacttcatcaagctctcactctttcaaatctcactcacattcaaat |
32605762 |
T |
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