View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3213_low_1 (Length: 1924)

Name: NF3213_low_1
Description: NF3213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3213_low_1
NF3213_low_1
[»] chr3 (33 HSPs)
chr3 (552-1272)||(26735537-26736260)
chr3 (1338-1924)||(26736325-26736916)
chr3 (1487-1924)||(26713263-26713680)
chr3 (696-1030)||(26707906-26708240)
chr3 (1338-1924)||(26733115-26733691)
chr3 (1632-1924)||(26743635-26743927)
chr3 (1632-1921)||(26750560-26750849)
chr3 (1340-1924)||(26697974-26698528)
chr3 (1338-1736)||(26691703-26692090)
chr3 (1136-1272)||(26713110-26713246)
chr3 (1033-1139)||(26708268-26708374)
chr3 (1631-1924)||(26675020-26675316)
chr3 (1166-1267)||(26697193-26697294)
chr3 (696-784)||(27713404-27713492)
chr3 (696-783)||(5498525-5498611)
chr3 (696-773)||(1627923-1628000)
chr3 (696-773)||(2943190-2943267)
chr3 (696-781)||(7407722-7407807)
chr3 (696-789)||(9633402-9633495)
chr3 (1797-1924)||(26694926-26695053)
chr3 (696-783)||(36035336-36035423)
chr3 (696-762)||(16457318-16457384)
chr3 (696-781)||(2550213-2550298)
chr3 (696-769)||(13846039-13846112)
chr3 (717-789)||(28745043-28745115)
chr3 (1797-1924)||(26732076-26732203)
chr3 (150-223)||(26700849-26700923)
chr3 (935-969)||(26722273-26722307)
chr3 (1142-1184)||(26750106-26750148)
chr3 (1631-1662)||(26692269-26692300)
chr3 (1874-1924)||(26690765-26690815)
chr3 (696-773)||(2179974-2180051)
chr3 (696-773)||(35083023-35083100)
[»] chr5 (15 HSPs)
chr5 (696-821)||(37233079-37233204)
chr5 (696-810)||(42076094-42076208)
chr5 (696-773)||(17037590-17037667)
chr5 (699-773)||(19985045-19985119)
chr5 (698-789)||(12042136-12042228)
chr5 (696-795)||(5079018-5079117)
chr5 (696-795)||(7410871-7410970)
chr5 (698-789)||(30786316-30786407)
chr5 (696-745)||(9333565-9333614)
chr5 (696-781)||(23679488-23679573)
chr5 (696-781)||(23855238-23855323)
chr5 (696-759)||(10869484-10869546)
chr5 (696-771)||(40401987-40402062)
chr5 (696-745)||(9354393-9354442)
chr5 (715-789)||(31571099-31571173)
[»] chr6 (17 HSPs)
chr6 (696-821)||(4485493-4485618)
chr6 (696-820)||(23264425-23264549)
chr6 (699-788)||(8496611-8496701)
chr6 (696-773)||(6684141-6684217)
chr6 (699-783)||(34374875-34374961)
chr6 (696-781)||(14669314-14669399)
chr6 (696-769)||(16734852-16734925)
chr6 (696-789)||(11936727-11936820)
chr6 (696-789)||(11948707-11948800)
chr6 (696-773)||(12591880-12591957)
chr6 (695-762)||(9631142-9631209)
chr6 (767-821)||(6673550-6673604)
chr6 (696-730)||(29667934-29667968)
chr6 (713-773)||(17719699-17719759)
chr6 (698-730)||(23904371-23904403)
chr6 (696-795)||(15361762-15361861)
chr6 (696-781)||(10070702-10070786)
[»] chr1 (11 HSPs)
chr1 (696-782)||(12189999-12190085)
chr1 (696-759)||(3399669-3399732)
chr1 (696-789)||(897502-897594)
chr1 (696-756)||(15204641-15204701)
chr1 (698-742)||(1844001-1844045)
chr1 (698-769)||(28636952-28637023)
chr1 (697-751)||(16222826-16222880)
chr1 (696-751)||(13208659-13208714)
chr1 (696-795)||(51758800-51758899)
chr1 (696-730)||(5911683-5911717)
chr1 (696-789)||(39368599-39368693)
[»] chr2 (12 HSPs)
chr2 (696-789)||(11017504-11017597)
chr2 (696-820)||(41573440-41573564)
chr2 (696-789)||(7702476-7702569)
chr2 (696-769)||(7718232-7718305)
chr2 (696-773)||(24479199-24479276)
chr2 (696-769)||(30267050-30267123)
chr2 (696-789)||(44921004-44921097)
chr2 (696-788)||(26734795-26734887)
chr2 (696-795)||(31342670-31342769)
chr2 (697-783)||(22966573-22966659)
chr2 (696-789)||(40016638-40016732)
chr2 (696-769)||(15513714-15513787)
[»] scaffold0002 (1 HSPs)
scaffold0002 (696-794)||(446238-446336)
[»] chr4 (12 HSPs)
chr4 (719-821)||(48465443-48465545)
chr4 (696-783)||(24558961-24559048)
chr4 (696-769)||(47066014-47066087)
chr4 (696-821)||(21317485-21317607)
chr4 (696-773)||(1684928-1685005)
chr4 (696-773)||(21539248-21539324)
chr4 (696-769)||(43600314-43600387)
chr4 (696-727)||(48464087-48464118)
chr4 (696-746)||(4881072-4881122)
chr4 (696-746)||(4904143-4904193)
chr4 (703-761)||(32514530-32514588)
chr4 (696-762)||(53300398-53300464)
[»] chr7 (16 HSPs)
chr7 (699-789)||(30089785-30089875)
chr7 (696-773)||(9242460-9242537)
chr7 (696-789)||(26621051-26621144)
chr7 (698-799)||(3234376-3234477)
chr7 (696-773)||(16086534-16086611)
chr7 (696-789)||(20277320-20277413)
chr7 (696-769)||(26608519-26608592)
chr7 (696-789)||(26619064-26619156)
chr7 (701-821)||(26701083-26701201)
chr7 (705-781)||(27135985-27136061)
chr7 (696-743)||(16170318-16170365)
chr7 (696-769)||(4685383-4685456)
chr7 (1867-1924)||(21111259-21111316)
chr7 (1867-1924)||(21130219-21130276)
chr7 (698-773)||(8241646-8241721)
chr7 (696-751)||(26224976-26225031)
[»] chr8 (19 HSPs)
chr8 (696-789)||(6801790-6801883)
chr8 (696-809)||(6403640-6403752)
chr8 (696-769)||(25638854-25638927)
chr8 (696-789)||(14997668-14997761)
chr8 (696-821)||(31347396-31347520)
chr8 (696-795)||(25637691-25637789)
chr8 (696-789)||(6223448-6223541)
chr8 (696-773)||(19369886-19369963)
chr8 (696-769)||(28249055-28249128)
chr8 (696-769)||(45356092-45356165)
chr8 (714-773)||(18766982-18767041)
chr8 (696-773)||(19448495-19448572)
chr8 (696-773)||(19532504-19532581)
chr8 (698-741)||(5650953-5650996)
chr8 (696-730)||(29345478-29345512)
chr8 (696-781)||(5000726-5000811)
chr8 (696-773)||(5528790-5528867)
chr8 (696-769)||(17634451-17634524)
chr8 (700-773)||(31369082-31369155)
[»] scaffold0684 (1 HSPs)
scaffold0684 (696-773)||(723-800)
[»] scaffold0069 (1 HSPs)
scaffold0069 (696-773)||(40674-40751)
[»] scaffold0576 (1 HSPs)
scaffold0576 (696-795)||(6746-6845)


Alignment Details
Target: chr3 (Bit Score: 661; Significance: 0; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 661; E-Value: 0
Query Start/End: Original strand, 552 - 1272
Target Start/End: Original strand, 26735537 - 26736260
Alignment:
Q  552 gggttacatgcaaggtactatacaatgctatcagccaatcacgatgtgaatccctctatgataatgagcaaaggtgatcagccaatcacagcgtcaatcc 651  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26735537 gggttacatgcaaggtactatacaatgctatcagccaatcacgatgtgaatccctctatgataatgagcaaaggtgatcagccaatcacaacgtcaatcc 26735636  T
Q  652 ctctacgggagttcctcgccaatttctccttgaacccttgcttgtaaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagttt 751  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26735637 ctctacgggagttcctcgccaatttcaccttgaacccttgcttgtaaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagctt 26735736  T
Q  752 cagtaacatttcatagtattattagtaacattaaaaaactgttgtatattcatatttttgtaacacttttcatagtatactaccaattgatgatttattc 851  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26735737 caataacatttcatagtattattagtaacattaaaaaactgttgtatattcatatttttgtaacacttttcatagtatactaccaattgatgatttattc 26735836  T
Q  852 aatgaaaattgtttctaatttgttgatgtttgaaannnnnnnatttgctgtcaataatgtagatgattgtgttgatcttatacaaggaatttcttcagca 951  Q
    |||||||||||||| ||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  26735837 aatgaaaattgtttttaatttgttgatgtttgaaatttttttatttgctgtcagtaatgtagatgattgtgttgatcatatacaaggaatttcttcagca 26735936  T
Q  952 caattagctgatctacgactaatacgtaaacaaaacgact---ttaggttttgtaacttagtttggaacgcatttcaacagcgccataattcaagacttg 1048  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26735937 caattagctgatctacgactaatacgtaaacaaaacgacttaattaggttttgtaacttagtttggaacgcatttcaacagcgccataattcaagacttg 26736036  T
Q  1049 gaaattggagaaatcaattctttaaaagctttgataaactttccaatatttgcttgaaagaattcattcaacaacatctagtcatttcaaagaagttgca 1148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26736037 gaaattggagaaatcaattctttaaaagctttgataaactttccaatatttgcttgaaagaattcattcaacaacatctagtcatttcaaagaagttgca 26736136  T
Q  1149 aaaggtggatccaccaatatgaacctcaatgtatttgtacaagacttgtcgtgtgttcaagggcattgagcacaaagagctcttgtacctttgtgacaat 1248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26736137 aaaggtggatccaccaatatgaacctcaatgtatttgtacaagacttgtcgtgtgttcaagggcattgagcacaaagagctcttgtacctttgtgacaat 26736236  T
Q  1249 tagaaaattggcagataaataaga 1272  Q
    ||||||||||||||||||||||||    
T  26736237 tagaaaattggcagataaataaga 26736260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 1338 - 1924
Target Start/End: Original strand, 26736325 - 26736916
Alignment:
Q  1338 acgagtgtatacaaatttaaatcaggttacattcaatccatttttgactaaaatcaattttacaaaatcaaannnnnnn-acattagaaccaatcatttc 1436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||    
T  26736325 acgagtgtatacaaatttaaatcaggttacattcaatccatttttgactaaaatcaattttacaaaatcaaattttttttacattagaaccaatcgtttc 26736424  T
Q  1437 cttaattattaaactaaattaactctagagaaagggtnnnnnnnnnnnnn----gtaatatactaatcataagttcttaaatcacattacatctagaaaa 1532  Q
    | ||||||||||||||||||||||||||||||||||                  ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26736425 cgtaattattaaactaaattaactctagagaaagggaaaaaaaaaaaaaaataagtaatatcctaatcataagttcttaaatcacattacatctagaaaa 26736524  T
Q  1533 taattgaaacacaagaagtgaaacagctgaataattgtaaacaggagagatggttactcattgtgaatgccatcaatagttatgttaatgacttaggaga 1632  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26736525 taattgaaacccaagaagtgaaacagttgaataattgtaaacaggagagatggttactcattgtgaatgccatcaatagttatgttaatgacttaggaga 26736624  T
Q  1633 gcctctcaacaacttgactcatggtgggtctaacatctttatcttcctgtacacaatccaatgcaacatttgccaaagtttccattctctttgcatcata 1732  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26736625 gcctctcaacaacttgactcatggtgggtctaacatctttatcttcctgtacacaatccaatgcaacatttgccaaagtttccattctctttgcatcata 26736724  T
Q  1733 atttgatcccaatgcagggtcaacaatttcttcaacccaacaagcaacttctagtacnnnnnnncttttctccctaacccatgttaccaacctctcatga 1832  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||    
T  26736725 atttgatcccaatgcagggtcaacaatttcttcaacccaacaagcaacttctagtacttttcttcttttctccctaacccatgttaccaatctctcatga 26736824  T
Q  1833 tacaactcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctccaacaccacaactccatagctataaacatc 1924  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26736825 tacaactcttctttgtctttgatttggatacctgttgttggactctttcctgtaatcatctccaacaccacaactccatagctataaacatc 26736916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 1487 - 1924
Target Start/End: Original strand, 26713263 - 26713680
Alignment:
Q  1487 gtaatatactaatcataagttcttaaatcacattacatctagaaaataattgaaacacaagaagtgaaacagctgaataattgtaaacaggagagatggt 1586  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||    
T  26713263 gtaatatcctaatcataagttcttaaatcacattacatctagaaaataattgaaacacaagaagtgaaacag------------------gagagatggt 26713344  T
Q  1587 tactcattgtgaatgccatcaatagttatgttaatgacttaggagagcctctcaacaacttgactcatggtgggtctaacatctttatcttcctgtacac 1686  Q
    || ||||||    |||||| |||||||||||| ||||||||||||  |||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  26713345 tattcattgcacttgccattaatagttatgttgatgacttaggag--cctctcaacaacttgacttatggtgggtctaacatctttctcttcctgtacac 26713442  T
Q  1687 aatccaatgcaacatttgccaaagtttccattctctttgcatcataatttgatcccaatgcagggtcaacaatttcttcaacccaacaagcaacttctag 1786  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26713443 aatccaatgcaacatttgccaaagtttccattctctttgcatcataatttgatcccaatgcagggtcaacaatttcttcaacccaacaaccaacttctag 26713542  T
Q  1787 tacnnnnnnncttttctccctaacccatgttaccaacctctcatgatacaactcttctttgtctttgatttggatacctgttgttggactctttccggta 1886  Q
    |||       |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26713543 tactttttttcttttctccctaacccatgttaccaatctctcatgatacaactcttctttgtctttgatttggataccagttgttggactctttccggta 26713642  T
Q  1887 atcatctccaacaccacaactccatagctataaacatc 1924  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26713643 atcatctccaacaccacaactccatagctataaacatc 26713680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 242; E-Value: 1e-133
Query Start/End: Original strand, 696 - 1030
Target Start/End: Original strand, 26707906 - 26708240
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||| | ||||||| |||||||||||||    
T  26707906 taaatttagtaacatttgaacaattgttaggtaaagtctctgttactaaagaggttcagtaacatttcatagtattctcagtaacagtaaaaaactgttg 26708005  T
Q  796 tatattcatatttttgtaacacttttcatagtatactaccaattgatgatttattcaatgaaaattgtttctaatttgttgatgtttgaaannnnnnnat 895  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  26708006 tatattcatatttttgtaacacttttcatagtatactaccaattgatgatttattcaatgaaaattgtttctaatttgttgatgtttgaaatttttttat 26708105  T
Q  896 ttgctgtcaataatgtagatgattgtgttgatcttatacaaggaatttcttcagcacaattagctgatctacgactaatacgtaaacaaaacgactttag 995  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||  ||    
T  26708106 ttgctgtcagtaatgtagatgattgtgttgaccatatacaaggaatttcttcagcacaattagctgatctatgactaatacttcaacaaaacgactcgag 26708205  T
Q  996 gttttgtaacttagtttggaacgcatttcaacagc 1030  Q
    |||||||||||| | || |||||||||||||||||    
T  26708206 gttttgtaacttggatttgaacgcatttcaacagc 26708240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 229; E-Value: 1e-125
Query Start/End: Original strand, 1338 - 1924
Target Start/End: Original strand, 26733115 - 26733691
Alignment:
Q  1338 acgagtgtatacaaatttaaatcaggttacattcaatccatttttgactaaaatcaattttacaaaatcaaannnnnnnacattagaaccaatcatttcc 1437  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | |       |||| ||||||||| ||||||    
T  26733115 acgagtgtatacaaatttaaatcagtttacattcaatccattttttactaaaatcaattttacaaaat-atatttttttacatcagaaccaataatttcc 26733213  T
Q  1438 ttaattattaaactaaattaactctagagaaagggtnnnnnnnnnnnnngtaatatactaatcataagttcttaaatcacattacatctagaaaataatt 1537  Q
     ||| ||||||||||| |||||| ||| | ||||                |||||| |||||||||  ||||||||||||| ||||||||||||||||||    
T  26733214 ctaactattaaactaagttaactgtagggtaagg-------aaaaaaaattaatatcctaatcatacattcttaaatcacaatacatctagaaaataatt 26733306  T
Q  1538 gaaacacaagaagtgaaacagctgaataattgtaaacaggagagatggttactcattgtgaatgccatcaatagttatgttaatgacttaggagagcctc 1637  Q
    |||  ||||| |||||||||| |||||||| ||||  |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||  |||||||    
T  26733307 gaattacaagtagtgaaacagttgaataatagtaataaggagagatggttattcattgtgcatgccattaatagttatgttaatgacttag--gagcctc 26733404  T
Q  1638 tcaacaacttgactcatggtgggtctaacatctttatcttcctgtacacaatccaatgcaacatttgccaaagtttccattctctttgcatcataatttg 1737  Q
    ||||||||||||||||||||||||||||||||||| |||||    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26733405 tcaacaacttgactcatggtgggtctaacatctttctcttcagccacacaatccaaagcaacatttgccaaagtttccattctctttgcatcataatttg 26733504  T
Q  1738 atcccaatgcagggtcaacaatttcttcaacccaacaagcaacttctag-tacnnnnnnncttttctccctaacccatgttaccaacctctcatgataca 1836  Q
    ||||||||  ||||||| ||||||| |||||||||||| ||| || ||| | |       ||||| ||||||||||||||| | || ||||||| | | |    
T  26733505 atcccaatttagggtcagcaatttcctcaacccaacaaccaaatt-tagatccttttcttcttttttccctaacccatgtttctaagctctcatcacaaa 26733603  T
Q  1837 actcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctccaacaccacaactccatagctataaacatc 1924  Q
    | ||||||   |||||| || | |||| ||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||    
T  26733604 agtcttctccatctttgtttggtatacttgttgttggacccttaccagtaattatctccaacaccacaactccatagctataaacatc 26733691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 1632 - 1924
Target Start/End: Original strand, 26743635 - 26743927
Alignment:
Q  1632 agcctctcaacaacttgactcatggtgggtctaacatctttatcttcctgtacacaatccaatgcaacatttgccaaagtttccattctctttgcatcat 1731  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| |||||  ||||| ||||||    
T  26743635 agcctctcaacaacttgactcatggtgggtctaacatctttctcttcctttacacaatccaaagcaacatctgccaaagtctccatcttctttacatcat 26743734  T
Q  1732 aatttgatcccaatgcagggtcaacaatttcttcaacccaacaagcaacttctagtacnnnnnnncttttctccctaacccatgttaccaacctctcatg 1831  Q
    ||||||||||||||  ||||||||||||||  |||||||||||| ||||||||| | |       |||||||||||||||||||||||||||||||||||    
T  26743735 aatttgatcccaatttagggtcaacaatttgctcaacccaacaaccaacttctaatccttttcttcttttctccctaacccatgttaccaacctctcatg 26743834  T
Q  1832 atacaactcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctccaacaccacaactccatagctataaacatc 1924  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  26743835 acacaactcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctccaacacaacgactccatagctataaacatc 26743927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 181; E-Value: 5e-97
Query Start/End: Original strand, 1632 - 1921
Target Start/End: Original strand, 26750560 - 26750849
Alignment:
Q  1632 agcctctcaacaacttgactcatggtgggtctaacatctttatcttcctgtacacaatccaatgcaacatttgccaaagtttccattctctttgcatcat 1731  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||  ||||| ||||||    
T  26750560 agcctctcaacaacttgactcatggtaggtctaacatctttatcttcttgtacacaatccaaagcaacatttgccaatgtctccatcttctttacatcat 26750659  T
Q  1732 aatttgatcccaatgcagggtcaacaatttcttcaacccaacaagcaacttctagtacnnnnnnncttttctccctaacccatgttaccaacctctcatg 1831  Q
    ||||||||||||||   ||||| ||||||| | | ||||||||| ||||||||| | |       ||||| |||||||||||||||||||||||||||||    
T  26750660 aatttgatcccaattttgggtctacaatttgtgccacccaacaaccaacttctactccttttcttcttttttccctaacccatgttaccaacctctcatg 26750759  T
Q  1832 atacaactcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctccaacaccacaactccatagctataaac 1921  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  26750760 acacaactcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctccaacacaacgactccatagctataaac 26750849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 179; E-Value: 8e-96
Query Start/End: Original strand, 1340 - 1924
Target Start/End: Original strand, 26697974 - 26698528
Alignment:
Q  1340 gagtgtatacaaatttaaatcaggttacattcaatccatttttgactaaaatcaattttacaaaatcaaannnnnnnacattagaaccaatcatttcctt 1439  Q
    |||||||| ||||| |||||||||||    ||||||||||||||||||||||||||||||||||||||         |||| ||| ||||| |||||| |    
T  26697974 gagtgtatccaaatgtaaatcaggtt----tcaatccatttttgactaaaatcaattttacaaaatcatttttttttacatcagagccaataatttccgt 26698069  T
Q  1440 aattattaaactaaattaactctagagaaagggtnnnnnnnnnnnnngtaatatactaatcataagttcttaaatcacattacatctagaaaataattga 1539  Q
    |||||||||||||| || ||||||||||||||                |||||| |||||||||  |||||||||||||||||||||||||||||| |||    
T  26698070 aattattaaactaagtttactctagagaaagg------aaaaacaaattaatatcctaatcatacattcttaaatcacattacatctagaaaataactga 26698163  T
Q  1540 aacacaagaagtgaaacagctgaataattgtaaacaggagagatggttactcattgtgaatgccatcaatagttatgttaatgacttaggagagcctctc 1639  Q
    |  ||||||||||||||||                  |||||||||||| |||||||| ||||||| ||||| ||||||||||||||| |||  ||||||    
T  26698164 attacaagaagtgaaacag------------------gagagatggttattcattgtgcatgccattaataggtatgttaatgacttatgag--cctctc 26698243  T
Q  1640 aacaacttgactcatggtgggtctaacatctttatcttcctgtacacaatccaatgcaacatttgccaaagtttccattctctttgcatcataatttgat 1739  Q
    ||||||||||||||||||||||||||||||||| |||||    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26698244 aacaacttgactcatggtgggtctaacatctttctcttcagacacacaatccaaagcaacatttgccaaagtttccattctctttgcatcataatttgat 26698343  T
Q  1740 cccaatgcagggtcaacaatttcttcaacccaacaagcaacttctag-tacnnnnnnncttttctccctaacccatgttaccaacctctcatgatacaac 1838  Q
    ||||||  ||||||| ||||||| |||||||||||| ||| || ||| | |       ||||| ||||||||||||||| |||| ||||||| | | ||     
T  26698344 cccaatttagggtcagcaatttcctcaacccaacaaccaaatt-tagatccttttctacttttttccctaacccatgttgccaagctctcatcacaaaag 26698442  T
Q  1839 tcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctccaacaccacaactccatagctataaacatc 1924  Q
    ||||||   |||||| || | |||| ||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||    
T  26698443 tcttctccatctttgtttggtatacttgttgttggacccttaccagtaattatctccaacaccacaactccatagctataaacatc 26698528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 165; E-Value: 2e-87
Query Start/End: Original strand, 1338 - 1736
Target Start/End: Original strand, 26691703 - 26692090
Alignment:
Q  1338 acgagtgtatacaaatttaaatcaggttacattcaatccatttttgactaaaatcaattttacaaaatcaaannnnnnnacattagaaccaatcatttcc 1437  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||| | |       |||| ||||||||| ||||||    
T  26691703 acgagtgtatacaaatttaaatcagtttacattcaatccatttcttactaaaatcaattttacaaaat-atatttttttacatcagaaccaataatttcc 26691801  T
Q  1438 ttaattattaaactaaattaactctagagaaagggtnnnnnnnnnnnnngtaatatactaatcataagttcttaaatcacattacatctagaaaataatt 1537  Q
     ||||||||||||||| |||||  ||  | ||||                |||||| |||||||||  ||||||||||||| ||||||||||||||||||    
T  26691802 ctaattattaaactaagttaacagtaaggtaagg--------aaaaaaattaatatcctaatcatacattcttaaatcacactacatctagaaaataatt 26691893  T
Q  1538 gaaacacaagaagtgaaacagctgaataattgtaaacaggagagatggttactcattgtgaatgccatcaatagttatgttaatgacttaggagagcctc 1637  Q
    |||  |||||||||||||||| |||||||| ||||  |||||||||||||| |||||||| ||||||| |||||||||||||||||||||   |||||||    
T  26691894 gaattacaagaagtgaaacagttgaataatagtaataaggagagatggttattcattgtgcatgccattaatagttatgttaatgactta--tgagcctc 26691991  T
Q  1638 tcaacaacttgactcatggtgggtctaacatctttatcttcctgtacacaatccaatgcaacatttgccaaagtttccattctctttgcatcataattt 1736  Q
    |||||||||||||||||||| |||||||||||||| |||||    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  26691992 tcaacaacttgactcatggtaggtctaacatctttttcttcagccacacaatccaaagcaacatttgtcaaagtttccattctctttgcatcataattt 26692090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 1e-70
Query Start/End: Original strand, 1136 - 1272
Target Start/End: Original strand, 26713110 - 26713246
Alignment:
Q  1136 caaagaagttgcaaaaggtggatccaccaatatgaacctcaatgtatttgtacaagacttgtcgtgtgttcaagggcattgagcacaaagagctcttgta 1235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26713110 caaagaagttgcaaaaggtggatccaccaatatgaacctcaatgtatttgtacaagacttgtcgtgtgttcaagggcattgagcacaaagagctcttgta 26713209  T
Q  1236 cctttgtgacaattagaaaattggcagataaataaga 1272  Q
    |||||||||||||||||||||||||||||||||||||    
T  26713210 cctttgtgacaattagaaaattggcagataaataaga 26713246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 7e-41
Query Start/End: Original strand, 1033 - 1139
Target Start/End: Original strand, 26708268 - 26708374
Alignment:
Q  1033 cataattcaagacttggaaattggagaaatcaattctttaaaagctttgataaactttccaatatttgcttgaaagaattcattcaacaacatctagtca 1132  Q
    ||||| ||||||||||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26708268 cataaatcaagacttggaagttgcagaaatgaattttttaaaagctttgataaactttccaatatttgcttgaaagaattcattcaacaacatctagtca 26708367  T
Q  1133 tttcaaa 1139  Q
    |||||||    
T  26708368 tttcaaa 26708374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-26
Query Start/End: Original strand, 1631 - 1924
Target Start/End: Original strand, 26675020 - 26675316
Alignment:
Q  1631 gagcctctcaacaacttgactcatggtgggtctaacatctttatcttcctgtacacaatccaatgcaacatttgccaaagt-ttccatt-ctctttgcat 1728  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| || ||   |||||| || ||| |||   |  ||  |    
T  26675020 gagcctctcaacaacttgactcatggtgggtctaacatctttctctttctctacacaatccaaagccaccactgccaaggtcttcaattgaacaatg--t 26675117  T
Q  1729 cataatttgatcccaatgcagggtcaacaatttcttcaacccaacaagcaacttctagtacnnnnnnncttttctccctaacccatgttaccaacctctc 1828  Q
    |||||||| ||||||||||||||||||| |||| ||||| ||||||  | ||||||  | |       ||||||||  ||| ||||||||| ||||||||    
T  26675118 cataatttaatcccaatgcagggtcaactatttgttcaatccaacatcccacttctgattctttccttcttttctctttaatccatgttactaacctctc 26675217  T
Q  1829 atgat---acaactctt-ctttgtctttgatttggatacctgttgttggactctttccggtaatcatctccaacaccacaactccatagctataaacatc 1924  Q
    || ||   || ||| || | |  ||| |||||| |||||  || ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  26675218 attatgtgac-actattccatcatctgtgatttcgatacaggtcgttggactctttccggtaatcatctccaacaccacaattccataactataaacatc 26675316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-26
Query Start/End: Original strand, 1166 - 1267
Target Start/End: Original strand, 26697193 - 26697294
Alignment:
Q  1166 tatgaacctcaatgtatttgtacaagacttgtcgtgtgttcaagggcattgagcacaaagagctcttgtacctttgtgacaattagaaaattggcagata 1265  Q
    |||||||||||| |||||| |||||||| | | |||| ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  26697193 tatgaacctcaacgtatttatacaagacattttgtgtattcaaggccattgagcacaaagagctcctgttcctttgtgacaattagaaaattggaagata 26697292  T
Q  1266 aa 1267  Q
    ||    
T  26697293 aa 26697294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 696 - 784
Target Start/End: Complemental strand, 27713492 - 27713404
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacatta 784  Q
    ||||||||||||||||| || |||||||||| |||| | ||||||||||| ||||| || || |||| |||||||||||||||||||||    
T  27713492 taaatttagtaacatttaaataattgttaggcaaaacctatgttactaaatagttttagcaatattttatagtattattagtaacatta 27713404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 696 - 783
Target Start/End: Original strand, 5498525 - 5498611
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacatt 783  Q
    ||||||||||||| | |||||||||||||||||||| | |||||||||||||||||  |||| |||| || |||||||||||||||||    
T  5498525 taaatttagtaacttctgaacaattgttaggtaaaacctatgttactaaagagttttggtaatattttat-gtattattagtaacatt 5498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 1628000 - 1627923
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    |||||||||||||| |||||||||||||| ||||| ||| |||||| ||||||||| ||| |||||| ||||||||||    
T  1628000 taaatttagtaacacttgaacaattgttaagtaaagtccgtgttacaaaagagttttagttacattttatagtattat 1627923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 2943267 - 2943190
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    |||||||||||||||| ||||||||||||||| ||  || ||||||||||| |||| ||| |||||| ||||||||||    
T  2943267 taaatttagtaacattcgaacaattgttaggttaagcccgtgttactaaagtgttttagttacattttatagtattat 2943190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 781
Target Start/End: Complemental strand, 7407807 - 7407722
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaaca 781  Q
    ||||||||| |||| ||||||||||||||||||||  || ||||||||||| |||| ||| |||||| |||||| ||| |||||||    
T  7407807 taaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattttatagtactatcagtaaca 7407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 789
Target Start/End: Complemental strand, 9633495 - 9633402
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||||||||| |||||| |||||||||||||||||  || |||||||||||||||| ||| |||||| | || |||||  |||||||| |||||    
T  9633495 taaatttagttacatttaaacaattgttaggtaaagcccctgttactaaagagttttagttacattttagagcattatatgtaacattcaaaaa 9633402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 1797 - 1924
Target Start/End: Complemental strand, 26695053 - 26694926
Alignment:
Q  1797 cttttctccctaacccatgttaccaacctctcatgatacaactcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctcca 1896  Q
    |||||||| || |||||||||||||| ||||||| ||    || ||||  |||| |||||  |||||| ||  ||| |||||| |||||||||||||| |    
T  26695053 cttttctctctcacccatgttaccaaactctcattatgagtcttttctccgtctgtgattaagatacccgtcattgcactcttcccggtaatcatctcta 26694954  T
Q  1897 acaccacaactccatagctataaacatc 1924  Q
     || ||||||||||||||||||||||||    
T  26694953 gcagcacaactccatagctataaacatc 26694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 696 - 783
Target Start/End: Original strand, 36035336 - 36035423
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacatt 783  Q
    |||||||||||||| ||| ||||||||||||||||   | ||||||||||||| || ||| |||||| ||||||||||  ||||||||    
T  36035336 taaatttagtaacaattgtacaattgttaggtaaagctcgtgttactaaagagctttagttacattttatagtattatatgtaacatt 36035423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 696 - 762
Target Start/End: Complemental strand, 16457384 - 16457318
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacattt 762  Q
    ||||||||||||||||||| |||||||||||||||   | |||||||||| || |||||||||||||    
T  16457384 taaatttagtaacatttgagcaattgttaggtaaagctcgtgttactaaaaagcttcagtaacattt 16457318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 781
Target Start/End: Original strand, 2550213 - 2550298
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaaca 781  Q
    ||||||||| |||| ||||||||||||||||||||  |  ||||||||||| |||| ||| |||||| |||||| |||| ||||||    
T  2550213 taaatttagcaacacttgaacaattgttaggtaaagcctgtgttactaaagtgttttagttacattttatagtactatttgtaaca 2550298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 769
Target Start/End: Original strand, 13846039 - 13846112
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||| |||| ||||||||||||||||||||  || ||||||||||| |||| ||| |||||| ||||||    
T  13846039 taaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattttatagta 13846112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 717 - 789
Target Start/End: Original strand, 28745043 - 28745115
Alignment:
Q  717 aattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||||||||   |||||||||||||||||| ||| |||||| | ||||||||| |||||||| |||||    
T  28745043 aattgttaggtaaagcacatgttactaaagagttttagttacattttagagtattatttgtaacattcaaaaa 28745115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1797 - 1924
Target Start/End: Complemental strand, 26732203 - 26732076
Alignment:
Q  1797 cttttctccctaacccatgttaccaacctctcatgatacaactcttctttgtctttgatttggatacctgttgttggactctttccggtaatcatctcca 1896  Q
    |||||||| || |||||||||||||| ||||||| ||    || ||||   ||| |||||  ||||| |||  ||| |||||| |||||||||||||| |    
T  26732203 cttttctctctcacccatgttaccaaactctcattatgagtcttttctccatctgtgattaagatacttgtcattgcactcttcccggtaatcatctcta 26732104  T
Q  1897 acaccacaactccatagctataaacatc 1924  Q
     || ||||||||||||||||||||||||    
T  26732103 gcagcacaactccatagctataaacatc 26732076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 26700849 - 26700923
Alignment:
Q  150 aatagtggaacttgcactttccacgagttttctattttctatt-ttgtcttttgctttgacaattattcattaca 223  Q
    |||||| |||||||||||||| | || |||||||||||| ||| |||| |||| ||||||| |||||||||||||    
T  26700849 aatagtagaacttgcactttcgatgaattttctattttcaattattgtatttttctttgaccattattcattaca 26700923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000007
Query Start/End: Original strand, 935 - 969
Target Start/End: Original strand, 26722273 - 26722307
Alignment:
Q  935 aaggaatttcttcagcacaattagctgatctacga 969  Q
    |||||||||||||||||||||||||||||||||||    
T  26722273 aaggaatttcttcagcacaattagctgatctacga 26722307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000007
Query Start/End: Original strand, 1142 - 1184
Target Start/End: Original strand, 26750106 - 26750148
Alignment:
Q  1142 agttgcaaaaggtggatccaccaatatgaacctcaatgtattt 1184  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  26750106 agttgcaaaaggtggatcctcctatatgaacctcaatgtattt 26750148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1631 - 1662
Target Start/End: Original strand, 26692269 - 26692300
Alignment:
Q  1631 gagcctctcaacaacttgactcatggtgggtc 1662  Q
    ||||||||||||||||||||||||||||||||    
T  26692269 gagcctctcaacaacttgactcatggtgggtc 26692300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1874 - 1924
Target Start/End: Complemental strand, 26690815 - 26690765
Alignment:
Q  1874 actctttccggtaatcatctccaacaccacaactccatagctataaacatc 1924  Q
    |||||| || ||||||||||| | || ||||||||||||||||||||||||    
T  26690815 actcttcccagtaatcatctctagcagcacaactccatagctataaacatc 26690765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 2179974 - 2180051
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||||| | ||||||||||||| || |||||| ||| ||||||||||||| || ||| | |||| ||||| ||||    
T  2179974 taaatttagaatcatttgaacaattcttgggtaaattccctgttactaaagagctttagttatattttatagtgttat 2180051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 35083023 - 35083100
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    |||||||||||| ||||||||||||||||| ||||| || |||||  || ||| || ||| ||| || ||||||||||    
T  35083023 taaatttagtaatatttgaacaattgttagataaaacccttgttagaaatgagctttagttacaatttatagtattat 35083100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-33; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-33
Query Start/End: Original strand, 696 - 821
Target Start/End: Original strand, 37233079 - 37233204
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||||||||||||| ||||||||||||| | ||| |||||||||| |||||||||||||||| |||||||||| ||||||||| ||||||| ||     
T  37233079 taaatttagtaacatttgagcaattgttaggtatagtccgtgttactaaaaagtttcagtaacattttatagtattatcagtaacatttaaaaactattt 37233178  T
Q  796 tatattcatatttttgtaacactttt 821  Q
     ||||| ||||||| |||||||||||    
T  37233179 catatttatattttcgtaacactttt 37233204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 696 - 810
Target Start/End: Original strand, 42076094 - 42076208
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| || ||||| || |||| ||||||||||  |||||||| ||||| ||||     
T  42076094 taaatttagtaacatttgaacaattgttagataaagtccatgttactaaaaagcttcaggaatattttatagtattatcggtaacatttaaaaattgtta 42076193  T
Q  796 tatattcatattttt 810  Q
     ||||| ||||||||    
T  42076194 catatttatattttt 42076208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 17037590 - 17037667
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||| |||||| ||||||||||    
T  17037590 taaatttagtaacatttgaacaattgttaggtaaagtcagtgttactaaagagttttagttacattttatagtattat 17037667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 699 - 773
Target Start/End: Original strand, 19985045 - 19985119
Alignment:
Q  699 atttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||||||| ||| |||||| ||||||||||    
T  19985045 atttagtaacatttgaataattgttaggtaaagtccaggttactaaagagttttagttacattttatagtattat 19985119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 698 - 789
Target Start/End: Complemental strand, 12042228 - 12042136
Alignment:
Q  698 aatttagtaacatttgaacaattgttaggtaaa-atccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||||||||||||||||||||||||||| |  | | |||||||||||||| ||| |||||| ||| ||||||| |||| | |||||||    
T  12042228 aatttagtaacatttgaacaattgttaggtaaagaaacctattactaaagagttttagttacattttatattattatttgtaataataaaaaa 12042136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 696 - 795
Target Start/End: Complemental strand, 5079117 - 5079018
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||| |||| ||||||||||||||||||||  || ||||||||||| |||| ||| |||||| |||||| |||  |||||| | ||||| |||||    
T  5079117 taaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgttg 5079018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 696 - 795
Target Start/End: Original strand, 7410871 - 7410970
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||| |||| ||||||||||||||||||||  || ||||||||||| |||| ||| |||||| ||||||  ||| |||||| | ||||| |||||    
T  7410871 taaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattttatagtacaatttgtaacaatcaaaaagtgttg 7410970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 698 - 789
Target Start/End: Original strand, 30786316 - 30786407
Alignment:
Q  698 aatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||||||||||||||||| ||||||||||||||  || |||||||||| || || ||| |||||| ||  ||||||| |||||| |||||||    
T  30786316 aatttagtaacatttgaataattgttaggtaaatgccttgttactaaaaagatttagtcacattttatgttattatttgtaacaataaaaaa 30786407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 745
Target Start/End: Complemental strand, 9333614 - 9333565
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaa 745  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  9333614 taaatttagtaacatttgagcaattgttaggtaaagtcgatgttactaaa 9333565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 781
Target Start/End: Original strand, 23679488 - 23679573
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaaca 781  Q
    ||||||| | |||||| |||||||| |||| |||| | | |||||||||||||||| ||| |||||| ||||||||||| ||||||    
T  23679488 taaattttgcaacattcgaacaattattagataaagttcgtgttactaaagagttttagttacattttatagtattatttgtaaca 23679573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 781
Target Start/End: Complemental strand, 23855323 - 23855238
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaaca 781  Q
    ||||||| | |||||| |||||||| |||| |||| | | |||||||||||||||| ||| |||||| ||||||||||| ||||||    
T  23855323 taaattttgcaacattcgaacaattattagataaagttcgtgttactaaagagttttagttacattttatagtattatttgtaaca 23855238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 696 - 759
Target Start/End: Original strand, 10869484 - 10869546
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaaca 759  Q
    |||||||||||||||||||||||||||||||| | |||| | ||||||||||||| | ||||||    
T  10869484 taaatttagtaacatttgaacaattgttaggt-atatccctcttactaaagagttacggtaaca 10869546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 696 - 771
Target Start/End: Complemental strand, 40402062 - 40401987
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtatt 771  Q
    |||||||||| || ||||||||||||||||||||| ||  |||| ||||| || ||||| ||||||| ||||||||    
T  40402062 taaatttagttacgtttgaacaattgttaggtaaagtctgtgttgctaaaaagcttcagcaacattttatagtatt 40401987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 696 - 745
Target Start/End: Complemental strand, 9354442 - 9354393
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaa 745  Q
    |||||||| |||||||||| |||||||||||||||  |||||||||||||    
T  9354442 taaatttaataacatttgagcaattgttaggtaaagcccatgttactaaa 9354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 715 - 789
Target Start/End: Original strand, 31571099 - 31571173
Alignment:
Q  715 acaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||||||||||| |||||||||||||||| || ||   ||||  ||||||||||  |||||||| |||||    
T  31571099 acaattgttaggtaaaacccatgttactaaagagctttagatccattatatagtattatcggtaacattcaaaaa 31571173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 2e-28; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 696 - 821
Target Start/End: Complemental strand, 4485618 - 4485493
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    |||||||||||| ||||||| |||||||||||||| ||| ||||| |||| ||||| ||||||| |  |||| ||||||||||||||||||||| |||||    
T  4485618 taaatttagtaatatttgaataattgttaggtaaagtccgtgttattaaatagttttagtaacaatctatagaattattagtaacattaaaaaaatgttg 4485519  T
Q  796 tatattcatatttttgtaacactttt 821  Q
     ||||| ||||||||| |||||||||    
T  4485518 catatttatatttttgcaacactttt 4485493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 696 - 820
Target Start/End: Complemental strand, 23264549 - 23264425
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| || | || |||||||||| || |||| ||||||| ||||     
T  23264549 taaatttagtaacattcgaacaattgttaggtaaaatccgtgttactaaagagcttcagcaaaactttatagtattatcagaaacactaaaaaaatgtta 23264450  T
Q  796 tatattcatatttttgtaacacttt 820  Q
      ||||  |||||||||||||||||    
T  23264449 cttatttgtatttttgtaacacttt 23264425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 699 - 788
Target Start/End: Complemental strand, 8496701 - 8496611
Alignment:
Q  699 atttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatt-tcatagtattattagtaacattaaaaa 788  Q
    ||||| |||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||| |  |||||||||||| ||| |||||||    
T  8496701 atttaataacatttgaacaattgtcagacaaaatctatgttactaaagagtttcagtaacattattttagtattattagaaacgttaaaaa 8496611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 6684141 - 6684217
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    |||||||||||||| | ||||| |||||||||||| |||||||||||||||||||| ||| |||||| ||||||||||    
T  6684141 taaatttagtaacactcgaaca-ttgttaggtaaagtccatgttactaaagagttttagttacattttatagtattat 6684217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 699 - 783
Target Start/End: Original strand, 34374875 - 34374961
Alignment:
Q  699 atttagtaacatttgaacaa--ttgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacatt 783  Q
    |||| |||||||||||||||  |||||||| ||||||  |||||||||||||||| ||||| |||| |||||||||| |||||||||    
T  34374875 attttgtaacatttgaacaaaattgttaggcaaaatctgtgttactaaagagtttgagtaatattttatagtattatgagtaacatt 34374961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 781
Target Start/End: Complemental strand, 14669399 - 14669314
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaaca 781  Q
    ||||||| | |||| | ||| |||||||||||||| ||| |||||||||||||||| ||| |||||| ||||||||||| ||||||    
T  14669399 taaattttgcaacactcgaataattgttaggtaaagtccgtgttactaaagagttttagttacattttatagtattatttgtaaca 14669314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 769
Target Start/End: Original strand, 16734852 - 16734925
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||| |||||||||||||||||||||||||  || ||||||||||| |||| ||| |||||| ||||||    
T  16734852 taaatttagcaacatttgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattttatagta 16734925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 789
Target Start/End: Complemental strand, 11936820 - 11936727
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||| |||| ||||||||||||||| ||||  || ||||||||||| |||| ||| |||||| |||||| |||  |||||| |||||||    
T  11936820 taaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaataaaaaa 11936727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 789
Target Start/End: Complemental strand, 11948800 - 11948707
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||| |||| ||||||||||||||| ||||  || ||||||||||| |||| ||| |||||| |||||| |||  |||||| |||||||    
T  11948800 taaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaataaaaaa 11948707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 12591880 - 12591957
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    |||||||||||||  | ||||||||||||||||||  || |||||||||||||||| ||| ||| || ||||||||||    
T  12591880 taaatttagtaacgctcgaacaattgttaggtaaagcccgtgttactaaagagttttagttacaatttatagtattat 12591957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 695 - 762
Target Start/End: Complemental strand, 9631209 - 9631142
Alignment:
Q  695 gtaaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacattt 762  Q
    |||||||||||||||||||||||||||||||| | |  || |||||||| ||||||| ||| ||||||    
T  9631209 gtaaatttagtaacatttgaacaattgttaggcatagcccctgttactatagagttttagttacattt 9631142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000007
Query Start/End: Original strand, 767 - 821
Target Start/End: Complemental strand, 6673604 - 6673550
Alignment:
Q  767 gtattattagtaacattaaaaaactgttgtatattcatatttttgtaacactttt 821  Q
    ||||| ||||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  6673604 gtatttttagtaacattaaaaaaatgttgtctatttatacttttgtaacactttt 6673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000007
Query Start/End: Original strand, 696 - 730
Target Start/End: Complemental strand, 29667968 - 29667934
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaa 730  Q
    |||||||||||||||||||||||||||||||||||    
T  29667968 taaatttagtaacatttgaacaattgttaggtaaa 29667934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 713 - 773
Target Start/End: Complemental strand, 17719759 - 17719699
Alignment:
Q  713 gaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||||||||| |||| ||| |||||||||||||||| ||| ||| || ||||||||||    
T  17719759 gaacaattgttagataaagtccgtgttactaaagagttttagttacaatttatagtattat 17719699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 698 - 730
Target Start/End: Complemental strand, 23904403 - 23904371
Alignment:
Q  698 aatttagtaacatttgaacaattgttaggtaaa 730  Q
    |||||||||||||||||||||||||||||||||    
T  23904403 aatttagtaacatttgaacaattgttaggtaaa 23904371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 696 - 795
Target Start/End: Original strand, 15361762 - 15361861
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||| |||| ||||||||||||||||||||  |  ||||||||||  |||| ||| |||||| |||||| |||  |||||| | ||||| |||||    
T  15361762 taaatttagcaacacttgaacaattgttaggtaaagccggtgttactaaaatgttttagttacattttatagtactatctgtaacaatcaaaaagtgttg 15361861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 696 - 781
Target Start/End: Original strand, 10070702 - 10070786
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaaca 781  Q
    |||||||| ||||| |  || |||||||| ||||| ||| |||||||||| ||||| ||| |||||| ||||||||||| ||||||    
T  10070702 taaatttaataacactcaaataattgttacgtaaagtccgtgttactaaa-agttttagttacattttatagtattatttgtaaca 10070786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 3e-24; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 696 - 782
Target Start/End: Original strand, 12189999 - 12190085
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacat 782  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||  ||| |||||||||||||||||||    
T  12189999 taaatttagtaacatttgaacaattgttaggtaaagcccgtgttactaaagagttttagtaattttttatagtattattagtaacat 12190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 696 - 759
Target Start/End: Original strand, 3399669 - 3399732
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaaca 759  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||    
T  3399669 taaatttagtaacatttgaacaattgttaggtaaaatctatgttactaaatagcttcggtaaca 3399732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 789
Target Start/End: Original strand, 897502 - 897594
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||||||||||||| ||||||||||||||||| || | ||||||||||||||| |  ||| |||||| |||  |||||| ||||||||||||||    
T  897502 taaatttagtaacaattgaacaattgttaggt-aagttcatgttactaaagagctatagttacattttatacaattatttgtaacattaaaaaa 897594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 696 - 756
Target Start/End: Original strand, 15204641 - 15204701
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagta 756  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||| ||||    
T  15204641 taaatttagtaacacttgaacaattgttaggtaaaatccattctactaaagaatttaagta 15204701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 698 - 742
Target Start/End: Original strand, 1844001 - 1844045
Alignment:
Q  698 aatttagtaacatttgaacaattgttaggtaaaatccatgttact 742  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  1844001 aatttagtaacatttgaacaattgttaggtaaaccccatgttact 1844045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 698 - 769
Target Start/End: Original strand, 28636952 - 28637023
Alignment:
Q  698 aatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    |||||||||||||||||| |||||||||||||| ||  |||| |||||||| || ||| |||||| ||||||    
T  28636952 aatttagtaacatttgaataattgttaggtaaagtcactgttgctaaagagatttagttacattttatagta 28637023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000007
Query Start/End: Original strand, 697 - 751
Target Start/End: Original strand, 16222826 - 16222880
Alignment:
Q  697 aaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagttt 751  Q
    ||||||||||||| ||||| ||||||||||||||  || ||||||||||||||||    
T  16222826 aaatttagtaacacttgaataattgttaggtaaagcccgtgttactaaagagttt 16222880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 696 - 751
Target Start/End: Original strand, 13208659 - 13208714
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagttt 751  Q
    ||||||||||| || |||||| |||||||||||||| || ||||||||||| ||||    
T  13208659 taaatttagtaccacttgaaccattgttaggtaaaacccgtgttactaaagtgttt 13208714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 696 - 795
Target Start/End: Original strand, 51758800 - 51758899
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||| |||| | |||||||| |||||||||   | | |||||||||||||| ||| |||||| ||||||||||  |||||| | ||||| |||||    
T  51758800 taaatttagcaacactcgaacaattattaggtaaagctcgtattactaaagagttttagttacattttatagtattatctgtaacaattaaaaagtgttg 51758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 696 - 730
Target Start/End: Complemental strand, 5911717 - 5911683
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaa 730  Q
    |||||||||||||| ||||||||||||||||||||    
T  5911717 taaatttagtaacacttgaacaattgttaggtaaa 5911683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 696 - 789
Target Start/End: Complemental strand, 39368693 - 39368599
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaaca-tttcatagtattattagtaacattaaaaaa 789  Q
    |||| ||||| ||||||  |||||||||||| |||   |||| |||||||||| |||||| ||| ||| |||||||||| ||||||||| |||||    
T  39368693 taaaattagtcacatttatacaattgttaggcaaagcacatgctactaaagagcttcagttacatttttatagtattatcagtaacatttaaaaa 39368599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-23; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 696 - 789
Target Start/End: Original strand, 11017504 - 11017597
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||| || |||||||||| || |||||||||| ||||||||| |||||    
T  11017504 taaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcagtaacatttaaaaa 11017597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 696 - 820
Target Start/End: Original strand, 41573440 - 41573564
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    |||||||||||||| || |||||||||||||||||  || ||||||||||    |||| |||||||| |||||||||||||||||||| | ||| |||||    
T  41573440 taaatttagtaacagttaaacaattgttaggtaaaccccgtgttactaaattacttcaataacattttatagtattattagtaacatttagaaaatgttg 41573539  T
Q  796 tatattcatatttttgtaacacttt 820  Q
      | ||  |||||||||||||||||    
T  41573540 cttttttgtatttttgtaacacttt 41573564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 789
Target Start/End: Original strand, 7702476 - 7702569
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||| ||||||||||||| ||||||||||||||||  |||| ||||||||||| || ||| ||||||  |||||||||  |||||||| |||||    
T  7702476 taaaattagtaacatttgtacaattgttaggtaaagcccatattactaaagagctttagttacattttgtagtattatctgtaacatttaaaaa 7702569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 769
Target Start/End: Original strand, 7718232 - 7718305
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||||||||  |||||||||||||| |||| ||| |||||||||||||||| | | |||||| ||||||    
T  7718232 taaatttagtaacacatgaacaattgttagataaagtccgtgttactaaagagttttaattacattttatagta 7718305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 24479199 - 24479276
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||||||||||||||||||||| |||||||||   | ||||||||||||| || ||| | |||| ||||||||||    
T  24479199 taaatttagtaacatttgaacaattcttaggtaaagctcgtgttactaaagagctttagttatattttatagtattat 24479276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 769
Target Start/End: Original strand, 30267050 - 30267123
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||||||||  |||||||||||||||||||  || |||||| ||||||||| ||| |||||| ||||||    
T  30267050 taaatttagtaacacctgaacaattgttaggtaaagcccgtgttaccaaagagttttagttacattttatagta 30267123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 789
Target Start/End: Original strand, 44921004 - 44921097
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||||||||  | |||||||||||||||||   | |||||||||||||||| ||| |||||| |||||| |||  |||||| |||||||    
T  44921004 taaatttagtaacacctaaacaattgttaggtaaagctcgtgttactaaagagttttagttacattttatagtactatccgtaacaataaaaaa 44921097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 696 - 788
Target Start/End: Original strand, 26734795 - 26734887
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaa 788  Q
    ||||||||| || ||||||| |||||||||||||| ||||| ||| ||||||| || |||| ||||| | | |||||| ||||||||| ||||    
T  26734795 taaatttagcaatatttgaataattgttaggtaaagtccatattattaaagagctttagtatcattttacaatattatcagtaacattcaaaa 26734887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 696 - 795
Target Start/End: Complemental strand, 31342769 - 31342670
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||| |||| ||||||||||||||| ||||  || ||||||||||| |||| ||| |||||| |||||| |||  |||||| | ||||| |||||    
T  31342769 taaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgttttagttacattttatagtactatctgtaacaatcaaaaagtgttg 31342670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000007
Query Start/End: Original strand, 697 - 783
Target Start/End: Original strand, 22966573 - 22966659
Alignment:
Q  697 aaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacatt 783  Q
    ||||||||| |||||| |||||||||||||||||  || ||||||||||||  || ||| |||||| | ||||||||  ||||||||    
T  22966573 aaatttagttacatttaaacaattgttaggtaaagcccctgttactaaagacctttagttacattttagagtattatctgtaacatt 22966659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000007
Query Start/End: Original strand, 696 - 789
Target Start/End: Original strand, 40016638 - 40016732
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagag-tttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||||||||||||||||||| ||||||||||||||  || | ||||||||||| ||| | | |||||| || |||||||  |||||||| |||||    
T  40016638 taaatttagtaacatttgaataattgttaggtaaagaccctattactaaagagattttaattacattttattgtattatctgtaacattcaaaaa 40016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 696 - 769
Target Start/End: Original strand, 15513714 - 15513787
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||| |||||| ||||||||||||||||||||   | |||||||||| || || ||| |||||| ||||||    
T  15513714 taaattttgtaacacttgaacaattgttaggtaaagctcgtgttactaaaaagatttagttacattttatagta 15513787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 8e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 8e-22
Query Start/End: Original strand, 696 - 794
Target Start/End: Complemental strand, 446336 - 446238
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgtt 794  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||| || ||||||| || |||||| || |||||||||||||||| ||||    
T  446336 taaatttggtaacatttgaacaattgttaggaaaagtccatattactaaagagctttagtaacactttatagtagtagtagtaacattaaaaaaatgtt 446238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 8e-22; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 8e-22
Query Start/End: Original strand, 719 - 821
Target Start/End: Original strand, 48465443 - 48465545
Alignment:
Q  719 ttgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttgtatattcatatttttgtaacact 818  Q
    ||||||||||||||   |||||||||| |||||||||||||||| |||||||||| ||||||||| |||||| |||  ||||| ||||||||| ||||||    
T  48465443 ttgttaggtaaaatttgtgttactaaaaagtttcagtaacattttatagtattatcagtaacatttaaaaacagttacatatttatatttttgcaacact 48465542  T
Q  819 ttt 821  Q
    |||    
T  48465543 ttt 48465545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 696 - 783
Target Start/End: Complemental strand, 24559048 - 24558961
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacatt 783  Q
    ||||||||||||||||||||| ||||||||||||   |  |||||||||||| ||| ||| | |||| |||||||||| |||||||||    
T  24559048 taaatttagtaacatttgaacgattgttaggtaacggctgtgttactaaagaattttagtgatattttatagtattatcagtaacatt 24558961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 769
Target Start/End: Complemental strand, 47066087 - 47066014
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||||||||  |||||||||||||||||||  || |||||| ||||||||| ||| |||||| ||||||    
T  47066087 taaatttagtaacacctgaacaattgttaggtaaagcccgtgttaccaaagagttttagttacattttatagta 47066014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 696 - 821
Target Start/End: Original strand, 21317485 - 21317607
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||||||||||| |||||||||||||||||  |  ||||||||||  | |||| |||||||| || ||||||  | ||||||| ||||| ||||     
T  21317485 taaatttagtaacatttcaacaattgttaggtaaaggctgtgttactaaaatgcttcactaacattttattgtattaccaataacattcaaaaagtgtt- 21317583  T
Q  796 tatattcatatttttgtaacactttt 821  Q
        || |||||||||||||||||||    
T  21317584 --actttatatttttgtaacactttt 21317607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 1685005 - 1684928
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||| | |||| | ||||||||||||| |||| ||| |||||||||||||||| ||| ||| || ||||||||||    
T  1685005 taaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagttttagttacaatttatagtattat 1684928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 21539324 - 21539248
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||||||||||||| |||||||||||| | || ||| ||||||||||||| || ||| ||||||  |||||||||    
T  21539324 taaatttagtaacatttaaacaattgttagat-aagtccttgttactaaagagatttagttacattttttagtattat 21539248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 696 - 769
Target Start/End: Original strand, 43600314 - 43600387
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||| || | ||||||||||||||||||||  || ||||||||||| |||| ||| |||||| ||||||    
T  43600314 taaatttagcaaaacttgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattttatagta 43600387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 696 - 727
Target Start/End: Original strand, 48464087 - 48464118
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggt 727  Q
    ||||||||||||||||||||||||||||||||    
T  48464087 taaatttagtaacatttgaacaattgttaggt 48464118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 696 - 746
Target Start/End: Complemental strand, 4881122 - 4881072
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaag 746  Q
    |||||||||||| ||||| | |||||||||||||| ||| |||||||||||    
T  4881122 taaatttagtaatatttgtataattgttaggtaaagtccgtgttactaaag 4881072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 696 - 746
Target Start/End: Complemental strand, 4904193 - 4904143
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaag 746  Q
    |||||||||||||||||| ||||||||||||||||   | |||||||||||    
T  4904193 taaatttagtaacatttgtacaattgttaggtaaagcacttgttactaaag 4904143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 703 - 761
Target Start/End: Original strand, 32514530 - 32514588
Alignment:
Q  703 agtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatt 761  Q
    ||||||||||||| ||||||||| ||||  |  ||| ||||||||||||||||||||||    
T  32514530 agtaacatttgaagaattgttagataaagccattgtaactaaagagtttcagtaacatt 32514588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 696 - 762
Target Start/End: Original strand, 53300398 - 53300464
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacattt 762  Q
    ||||||||||||||  | |||||||||||||||||  || |||||| ||||||||| ||| ||||||    
T  53300398 taaatttagtaacacctaaacaattgttaggtaaagcccgtgttaccaaagagttttagttacattt 53300464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-19; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 699 - 789
Target Start/End: Original strand, 30089785 - 30089875
Alignment:
Q  699 atttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||| || ||| |||||| |||||||||||  ||||||| |||||    
T  30089785 atttagtaacatttgaacaattgttaggaaaagcccatgttactaaagagctttagttacattttatagtattatttttaacattcaaaaa 30089875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 8e-19
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 9242537 - 9242460
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||    
T  9242537 taaattttgtaacacttgaacaattgttagataaagtccatgttactaaagagttttagttacattttatagtattat 9242460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-19
Query Start/End: Original strand, 696 - 789
Target Start/End: Complemental strand, 26621144 - 26621051
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||| ||||||| |||||||||||| ||||| |||||||||||||||| || ||| |||||| ||||||||||  |||||||| |||||    
T  26621144 taaatttagcaacatttaaacaattgttagataaaagccatgttactaaagagctttagttacattttatagtattatctgtaacattcaaaaa 26621051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 5e-17
Query Start/End: Original strand, 698 - 799
Target Start/End: Original strand, 3234376 - 3234477
Alignment:
Q  698 aatttagtaacatttgaacaattg-ttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttgt 796  Q
    ||||||||||||||||| |||||  ||||||||| ||| |||||||||| || ||||||||||||| || ||||||||||||||||| ||||| ||| ||    
T  3234376 aatttagtaacatttgaccaatttattaggtaaagtccgtgttactaaatagcttcagtaacatttaat-gtattattagtaacattcaaaaaatgtcgt 3234474  T
Q  797 ata 799  Q
    |||    
T  3234475 ata 3234477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 16086534 - 16086611
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    |||||||| ||||||||||| ||||||||||||||   ||||||||| || || ||||||||||||| ||||||||||    
T  16086534 taaatttaataacatttgaataattgttaggtaaagctcatgttacttaatagcttcagtaacattttatagtattat 16086611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 789
Target Start/End: Complemental strand, 20277413 - 20277320
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    ||||||||||||||||| |||||||||||||||||   | ||||||||||||| || ||| |||||  ||||||||||  |||||| |||||||    
T  20277413 taaatttagtaacatttaaacaattgttaggtaaagcacctgttactaaagagctttagttacattatatagtattatctgtaacaataaaaaa 20277320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 769
Target Start/End: Complemental strand, 26608592 - 26608519
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||||||| || |||  ||||| ||||||    
T  26608592 taaatttagtaacatttgaacaattgttagataaagcccatgttactaaagagctttagttgcattttatagta 26608519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 789
Target Start/End: Complemental strand, 26619156 - 26619064
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||||||| |||||||||||||||||| |||||||  | |||||||||||||  || ||| |||||| ||||||||||| |||||||| |||||    
T  26619156 taaatttattaacatttgaacaattgt-aggtaaatcctatgttactaaagaactttagttacatttgatagtattatttgtaacattcaaaaa 26619064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 701 - 821
Target Start/End: Original strand, 26701083 - 26701201
Alignment:
Q  701 ttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttgtatat 800  Q
    ||||||||| |||  |||||||||||||||  || |||||||||| |  |||||||||| || || ||||||||||||||||| | ||| ||||| ||||    
T  26701083 ttagtaacagttggccaattgttaggtaaagcccgtgttactaaataacttcagtaacactttat-gtattattagtaacattcagaaaatgttgcatat 26701181  T
Q  801 tcatatttttgtaacactttt 821  Q
    | ||| |||||||||||||||    
T  26701182 ttata-ttttgtaacactttt 26701201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 705 - 781
Target Start/End: Original strand, 27135985 - 27136061
Alignment:
Q  705 taacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaaca 781  Q
    ||||||||||||||||||||| ||||  |  ||||||||||||||||| |||||| ||  | |||||||||||||||    
T  27135985 taacatttgaacaattgttagataaagcctgtgttactaaagagtttcggtaacagtttttggtattattagtaaca 27136061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 696 - 743
Target Start/End: Original strand, 16170318 - 16170365
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttacta 743  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||    
T  16170318 taaatttagtaacacttaaacaattgttaggtaaaatcaatgttacta 16170365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 696 - 769
Target Start/End: Complemental strand, 4685456 - 4685383
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||| |||| ||||||||||||||||||||  || | ||||||||| |||| ||| |||||| ||||||    
T  4685456 taaatttagcaacacttgaacaattgttaggtaaagcccgtattactaaagtgttttagttacattttatagta 4685383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1867 - 1924
Target Start/End: Original strand, 21111259 - 21111316
Alignment:
Q  1867 ttgttggactctttccggtaatcatctccaacaccacaactccatagctataaacatc 1924  Q
    ||||||||||||||||||| ||||| |||||||  ||||| ||||| |||||||||||    
T  21111259 ttgttggactctttccggttatcatatccaacaaaacaaccccataactataaacatc 21111316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1867 - 1924
Target Start/End: Original strand, 21130219 - 21130276
Alignment:
Q  1867 ttgttggactctttccggtaatcatctccaacaccacaactccatagctataaacatc 1924  Q
    ||||||||||||||||||| |||||||| ||||| ||||| || || |||||||||||    
T  21130219 ttgttggactctttccggttatcatctctaacacgacaaccccgtaactataaacatc 21130276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 698 - 773
Target Start/End: Original strand, 8241646 - 8241721
Alignment:
Q  698 aatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    |||||| ||| ||||||||| ||||||| |||||||||||||| ||||||  |||||| |||| | ||| ||||||    
T  8241646 aatttaataatatttgaacagttgttagataaaatccatgttattaaagaacttcagttacatattataatattat 8241721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 696 - 751
Target Start/End: Complemental strand, 26225031 - 26224976
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagttt 751  Q
    |||||||||||||| |||||||||| |||||||||  |  ||||||||||||||||    
T  26225031 taaatttagtaacacttgaacaattattaggtaaagccggtgttactaaagagttt 26224976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 8e-19; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 8e-19
Query Start/End: Original strand, 696 - 789
Target Start/End: Complemental strand, 6801883 - 6801790
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||||||||||||| ||||||||||||||||||||  || |||||||||||||||| ||| |||||| | |||||||   ||||||||||||||    
T  6801883 taaatttagtaacagttgaacaattgttaggtaaagcccctgttactaaagagttttagttacattttagagtattagctgtaacattaaaaaa 6801790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 696 - 809
Target Start/End: Original strand, 6403640 - 6403752
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||||||||||||| |||||||||||||||  || ||||| |||| || ||||||||||||| |||  || ||| |||||| ||||||| |||||    
T  6403640 taaatttagtaacatttgagcaattgttaggtaaagcccgtgttattaaaaagcttcagtaacattttatatcataatt-gtaacagtaaaaaaatgttg 6403738  T
Q  796 tatattcatatttt 809  Q
     ||||| |||||||    
T  6403739 catatttatatttt 6403752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 696 - 769
Target Start/End: Original strand, 25638854 - 25638927
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||| ||| |||||| ||||||    
T  25638854 taaatttagcaacacttgaacaattgttaggtaaaacccatgttactaaagtgttttagttacattttatagta 25638927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 789
Target Start/End: Original strand, 14997668 - 14997761
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||| ||||||||||||| | ||||||||||||||| |||||||||||||||| || ||| || ||| |||||||||   |||||||| |||||    
T  14997668 taaaattagtaacatttgtagaattgttaggtaaaacccatgttactaaagagctttagttaccttttatagtattaactgtaacattcaaaaa 14997761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 821
Target Start/End: Original strand, 31347396 - 31347520
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||||||||||||| |||||||||| ||||  |  |||||||||  |  ||||||||||||| |||  |||||| |||||| ||||||| ||||     
T  31347396 taaatttagtaacatttgatcaattgttagataaatcctgtgttactaaccatcttcagtaacattttatatcattatttgtaacaataaaaaaatgtta 31347495  T
Q  796 tatattcatatttttgtaacactttt 821  Q
     ||||| ||| |||||||||||||||    
T  31347496 catatttata-ttttgtaacactttt 31347520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000008
Query Start/End: Original strand, 696 - 795
Target Start/End: Original strand, 25637691 - 25637789
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||| |||| | ||||||||||||||||||  || |||||||||||| ||| ||| |||||| ||||||||||| |||||| | ||||| |||||    
T  25637691 taaatttagcaacactcgaacaattgttaggtaaagcccgtgttactaaagaattttagttacattttatagtattatt-gtaacaattaaaaagtgttg 25637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 789
Target Start/End: Original strand, 6223448 - 6223541
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaa 789  Q
    |||||||||||||||||| | ||||||||||||||   | |||||||||||||||| ||| ||| || ||| ||||||  |||||||| |||||    
T  6223448 taaatttagtaacatttgtaaaattgttaggtaaagcgcgtgttactaaagagttttagttacactttataatattatatgtaacattcaaaaa 6223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 19369963 - 19369886
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||| | |||| | ||||||||||||| |||| ||| |||||||||||||||| ||| |||||| ||||||||||    
T  19369963 taaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagttttagttacattttatagtattat 19369886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 769
Target Start/End: Complemental strand, 28249128 - 28249055
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||| |||| ||||||||||||||||||||  || ||||||||||| |||| ||| |||||| ||||||    
T  28249128 taaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattttatagta 28249055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 696 - 769
Target Start/End: Complemental strand, 45356165 - 45356092
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    ||||||||| |||| ||||||||||||||||||||  || ||||||||||| |||| ||| |||||| ||||||    
T  45356165 taaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgttttagttacattttatagta 45356092  T

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Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 714 - 773
Target Start/End: Original strand, 18766982 - 18767041
Alignment:
Q  714 aacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||||||||||||| | | |||||||||||||||| ||| |||||| ||||||||||    
T  18766982 aacaattgttaggtaaagtacgtgttactaaagagttttagttacattttatagtattat 18767041  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 19448495 - 19448572
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||| | |||| | ||||||||||||| |||| ||| |||||||||||||||| ||| | |||| ||||||||||    
T  19448495 taaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagttttagttatattttatagtattat 19448572  T

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Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 19532581 - 19532504
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||| | |||| | ||||||||||||| |||| ||| |||||||||||||||| ||| | |||| ||||||||||    
T  19532581 taaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagttttagttatattttatagtattat 19532504  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 698 - 741
Target Start/End: Complemental strand, 5650996 - 5650953
Alignment:
Q  698 aatttagtaacatttgaacaattgttaggtaaaatccatgttac 741  Q
    ||||||| |||||||||||||||||||||||||| || ||||||    
T  5650996 aatttagcaacatttgaacaattgttaggtaaaacccttgttac 5650953  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 696 - 730
Target Start/End: Original strand, 29345478 - 29345512
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaa 730  Q
    ||||||||||||| |||||||||||||||||||||    
T  29345478 taaatttagtaacctttgaacaattgttaggtaaa 29345512  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 696 - 781
Target Start/End: Original strand, 5000726 - 5000811
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaaca 781  Q
    ||||||||||||||||||| |||| ||||||| ||| |  ||||||||||||| |  ||||| |  | |||||||||| |||||||    
T  5000726 taaatttagtaacatttgagcaatagttaggtgaaacctgtgttactaaagagctagagtaagacgttatagtattatcagtaaca 5000811  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 5528790 - 5528867
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||||| |||| |  |||||||||||| |||| ||  |||||||||||||||| ||| |||||| | ||||||||    
T  5528790 taaatttagcaacactcaaacaattgttagataaagtctgtgttactaaagagttttagttacattttacagtattat 5528867  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 696 - 769
Target Start/End: Complemental strand, 17634524 - 17634451
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagta 769  Q
    |||||||| ||||| ||||||||||| ||||||||  || ||||||||||||  || ||| |||||| ||||||    
T  17634524 taaatttaataacacttgaacaattgataggtaaagcccgtgttactaaagaaatttagttacattttatagta 17634451  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000007
Query Start/End: Original strand, 700 - 773
Target Start/End: Complemental strand, 31369155 - 31369082
Alignment:
Q  700 tttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    |||||| |||||| ||||| ||||| |||||    ||||||||||||||||||||| |||||| |||| |||||    
T  31369155 tttagtgacatttaaacaaatgttatgtaaagcttatgttactaaagagtttcagttacattttataggattat 31369082  T

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Target: scaffold0684 (Bit Score: 42; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 800 - 723
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||| | |||| | ||||||||||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||    
T  800 taaattttgcaacactcgaacaattgttagataaagtccatgttactaaagagttttagttacattttatagtattat 723  T

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Target: scaffold0069 (Bit Score: 42; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 696 - 773
Target Start/End: Complemental strand, 40751 - 40674
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattat 773  Q
    ||||||| | |||| | ||||||||||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||    
T  40751 taaattttgcaacactcgaacaattgttagataaagtccatgttactaaagagttttagttacattttatagtattat 40674  T

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Target: scaffold0576 (Bit Score: 32; Significance: 0.00000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 696 - 795
Target Start/End: Original strand, 6746 - 6845
Alignment:
Q  696 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagtttcagtaacatttcatagtattattagtaacattaaaaaactgttg 795  Q
    ||||||||| |||| ||||||||||||||||||||  |  ||||||||||  |||| ||| |||||| |||||| |||  |||||| | ||||| |||||    
T  6746 taaatttagcaacacttgaacaattgttaggtaaagccggtgttactaaaatgttttagttacattttatagtactatctgtaacaatcaaaaagtgttg 6845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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