View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3217_high_4 (Length: 209)
Name: NF3217_high_4
Description: NF3217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3217_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 32103662 - 32103465
Alignment:
| Q |
1 |
gaaaaaactgtttggtaatgactgaatgaataaagaatggcggctccatctccattaggcagtaagcttcaaaacatgttgcaggctgcggtgcaatctg |
100 |
Q |
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| T |
32103662 |
gaaaaaactgtttggtaatgactgaatgaataaagaatggctgctccatctccattaggcagtaagcttcaaaacatgttgcaggctgcggtgcaatctg |
32103563 |
T |
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| Q |
101 |
ttcagtggacttatagcctcttctggcaactttgcccacaacaactgtacgtcatcattttcttttcctcttcctcactcactatatattcttcttct |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32103562 |
ttcagtggacttatagcctcttctggcaactttgcccacaacaactgtacgtcatcattttcttttcctcttcctcactcactatatattcttcttct |
32103465 |
T |
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