View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3218_high_13 (Length: 347)

Name: NF3218_high_13
Description: NF3218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3218_high_13
NF3218_high_13
[»] scaffold0438 (1 HSPs)
scaffold0438 (1-301)||(5282-5582)
[»] chr5 (2 HSPs)
chr5 (1-250)||(33957897-33958146)
chr5 (170-275)||(28091058-28091163)
[»] chr3 (13 HSPs)
chr3 (165-347)||(1186147-1186332)
chr3 (165-310)||(1204251-1204396)
chr3 (165-310)||(1304694-1304839)
chr3 (169-271)||(480946-481048)
chr3 (165-271)||(778184-778290)
chr3 (168-271)||(476034-476137)
chr3 (2-132)||(8033132-8033268)
chr3 (165-264)||(5361015-5361114)
chr3 (165-230)||(13490912-13490977)
chr3 (211-264)||(45870515-45870568)
chr3 (210-264)||(2996508-2996562)
chr3 (168-264)||(7118766-7118862)
chr3 (209-257)||(20977366-20977414)
[»] chr2 (4 HSPs)
chr2 (165-264)||(43875203-43875302)
chr2 (178-264)||(43864049-43864135)
chr2 (165-264)||(43867527-43867626)
chr2 (168-271)||(38989109-38989212)
[»] chr4 (1 HSPs)
chr4 (168-259)||(52186834-52186925)
[»] chr7 (3 HSPs)
chr7 (187-264)||(6889148-6889225)
chr7 (186-264)||(32413626-32413704)
chr7 (170-230)||(6844163-6844223)
[»] chr6 (7 HSPs)
chr6 (186-264)||(7115544-7115622)
chr6 (186-264)||(7120616-7120694)
chr6 (186-264)||(7124020-7124098)
chr6 (200-264)||(7140748-7140812)
chr6 (200-264)||(8680362-8680426)
chr6 (186-264)||(7175432-7175510)
chr6 (186-264)||(8656649-8656727)


Alignment Details
Target: scaffold0438 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 5582 - 5282
Alignment:
Q  1 ttgtgtgtgaaagcatattctataaccatttggtataggctaatgtttataaaatcattgttgtgcaaaaggagagtagagagagcggttgagtgatcgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  5582 ttgtgtgtgaaagcatattctataaccatttggtataggctaatgttttcaaaatgattgttgtgcaaaaggagagcagagagagcggttgagtgatcgc 5483  T
Q  101 gaagagacaaaaacatagacaggaaattttcgtagatttggctgtcaatatatttgttacaatctaatgtaagagtgggaagagtcttccagagattgat 200  Q
    ||||||||||||||||| ||||||||||||||||||||| ||  ||| || ||| || ||||||||||||||||||||||||||||||||||||||||||    
T  5482 gaagagacaaaaacataaacaggaaattttcgtagatttcgcaatcactaaattggtaacaatctaatgtaagagtgggaagagtcttccagagattgat 5383  T
Q  201 ccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtgatggagaagatggtcgctcaattcactgatcctgtct 300  Q
    ||||||||||||||||||||| |||||||| |||||| | |  ||||||||||| |||||||||  |||||||  ||||  |||| ||||||||||||||    
T  5382 ccatcttttggataaaatgcatgtttgaacggcctctcttgtgttcaaaaaggacagtatgtgaatgagaagacagtcggccaatacactgatcctgtct 5283  T
Q  301 t 301  Q
    |    
T  5282 t 5282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 8e-89; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 33957897 - 33958146
Alignment:
Q  1 ttgtgtgtgaaagcatattctataaccatttggtataggctaatgtttataaaatcattgttgtgcaaaaggagagtagagagagcggttgagtgatcgc 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||||||||||| |||| ||||||||| |||||||||||||    
T  33957897 ttgtgtgtgaaagcatattctgtaaccatttggtataggctaatgtttctaaaatgactgttgtgcaaaagaagagcagagagagccgttgagtgatcgc 33957996  T
Q  101 gaagagacaaaaacatagacaggaaattttcgtagatttggctgtcaatatatttgttacaatctaatgtaagagtgggaagagtcttccagagattgat 200  Q
    ||||||||||||||||||| | |||| |||| ||| |||||| |||| || |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33957997 gaagagacaaaaacatagagatgaaaatttcataggtttggcggtcactaaatttgtaacaatctaatgtaagagtgtgaagagtcttccagagattgat 33958096  T
Q  201 ccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaa 250  Q
    |||||||||||||||||||||||||||||| |||||| |||  |||||||    
T  33958097 ccatcttttggataaaatgcaagtttgaacggcctctctggtgttcaaaa 33958146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 28091163 - 28091058
Alignment:
Q  170 taagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtgatggag 269  Q
    |||| |||||||||  |||||||||||||    |||||||||| | ||||||||||||||| || | |||||||  |||||||||||| || ||| |||     
T  28091163 taagggtgggaagacgcttccagagattgtcgaatcttttggagagaatgcaagtttgaacggcttgtttggcaaacaaaaaggagagaatttgaaggat 28091064  T
Q  270 aagatg 275  Q
    ||||||    
T  28091063 aagatg 28091058  T

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Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 165 - 347
Target Start/End: Complemental strand, 1186332 - 1186147
Alignment:
Q  165 taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1186332 taatgtaagagtggaaagagtcttccagagattgatccatcttttcgataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 1186233  T
Q  265 tggagaagatggtcgctcaattcactgatcctgtcttcttcaatttcgatgtcgtccctacgctgctgct---tcttactttgcct 347  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||   |||||||||||||    
T  1186232 tggagaagattgtcgctcaattcactcatcctgtcttcttcaatttcaatgtcttccctacgctgctgctgcctcttactttgcct 1186147  T

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Target: chr3; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 165 - 310
Target Start/End: Complemental strand, 1204396 - 1204251
Alignment:
Q  165 taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1204396 taatgtaagagtggaaagagtcttccagagattgatccatcttttcgataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 1204297  T
Q  265 tggagaagatggtcgctcaattcactgatcctgtcttcttcaattt 310  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||    
T  1204296 tggagaagattgtcgctcaattcactcatcctgtcttcttcaattt 1204251  T

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Target: chr3; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 165 - 310
Target Start/End: Original strand, 1304694 - 1304839
Alignment:
Q  165 taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1304694 taatgtaagagtggaaagagtcttccagagattgatccatcttttcgataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 1304793  T
Q  265 tggagaagatggtcgctcaattcactgatcctgtcttcttcaattt 310  Q
    | |||||||||||||||||||||||| |||||||||||||||||||    
T  1304794 ttgagaagatggtcgctcaattcactcatcctgtcttcttcaattt 1304839  T

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Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 481048 - 480946
Alignment:
Q  169 gtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtgatgga 268  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||| ||||||    
T  481048 gtaagcgtgggaagagtcttccagagattgatccatcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtatgagatgga 480949  T
Q  269 gaa 271  Q
    |||    
T  480948 gaa 480946  T

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Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 778184 - 778290
Alignment:
Q  165 taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| || |||||||||    
T  778184 taatgtaagagtgggtagaattttccagagattgatccatcttttggacaaaatgcaagtttggactgcctctttggctttcaaaaaagatagtatgtga 778283  T
Q  265 tggagaa 271  Q
     ||||||    
T  778284 aggagaa 778290  T

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Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 476137 - 476034
Alignment:
Q  168 tgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtgatgg 267  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |||||||||||| ||||| ||    
T  476137 tgtaagggtgggaagagtattccagagattgatccatcttttggataaaatacaagtttgaacggcttctttggcgtttaaaaaggagagtgtgtgaagg 476038  T
Q  268 agaa 271  Q
    ||||    
T  476037 agaa 476034  T

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Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 8033132 - 8033268
Alignment:
Q  2 tgtgtgtgaaagcatattctataaccatttggtataggctaatgtt---tataa----aatcattgttgtgcaaaaggagagtagagagagcggttgagt 94  Q
    ||||||||||||||||||||||||||||| |||||| |||| | ||   || ||    ||| || ||||||||||||||||| | |||||||||||||||    
T  8033132 tgtgtgtgaaagcatattctataaccattcggtatacgcta-tcttccctaaaatgacaatgatagttgtgcaaaaggagagcacagagagcggttgagt 8033230  T
Q  95 gatcgcgaagagacaaaaacatagacaggaaattttcg 132  Q
    |||||||| |||||||||||||||| |||| |||||||    
T  8033231 gatcgcgatgagacaaaaacatagaaaggagattttcg 8033268  T

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Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 5361015 - 5361114
Alignment:
Q  165 taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |  || | |||| | || ||||||||||| ||||||    
T  5361015 taatgcaagagttggaagagtcttccagagattggtccatcttttggataaaatgcaagtttggatggcttttttgacgtttaaaaaggagagcatgtga 5361114  T

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Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 13490912 - 13490977
Alignment:
Q  165 taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaac 230  Q
    ||||||||| ||||||||| ||||||| | |||  |||||||||||||||||||  ||||||||||    
T  13490912 taatgtaagggtgggaagattcttccatacattcttccatcttttggataaaattaaagtttgaac 13490977  T

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Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 45870515 - 45870568
Alignment:
Q  211 gataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||| ||||||||||||||| |||||||||||| |||| || |||||||||    
T  45870515 gataaaacgcaagtttgaactgcgtctttggcattcgaaaacgacagtatgtga 45870568  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 2996508 - 2996562
Alignment:
Q  210 ggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    |||||||||||||||||||||||| ||||| |  |||||||| || |||||||||    
T  2996508 ggataaaatgcaagtttgaactgcatcttttgtgttcaaaaatgaaagtatgtga 2996562  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 7118862 - 7118766
Alignment:
Q  168 tgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    |||||| |||||||||  |||||| |||||  ||||||||||||| | |||  |||||||||| |  | |||| | |||||| ||||||||||||||    
T  7118862 tgtaagggtgggaagatgcttccatagatttttccatcttttggagagaatagaagtttgaacggtttgtttgactttcaaagaggagagtatgtga 7118766  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 20977414 - 20977366
Alignment:
Q  209 tggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagag 257  Q
    |||||||||||||||||||||| || | || |||||| |||||||||||    
T  20977414 tggataaaatgcaagtttgaacggcgttttgggcatttaaaaaggagag 20977366  T

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Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 43875203 - 43875302
Alignment:
Q  165 taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||  ||||||| ||||| |||||||| | |||||||    
T  43875203 taatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttgaacgacctcttttgcatttaaaaaggacactatgtga 43875302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 43864049 - 43864135
Alignment:
Q  178 ggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||| |||||||||||||| |||||||||    
T  43864049 ggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttgaacggccttttttgcattcaaaaaggacagtatgtga 43864135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 43867527 - 43867626
Alignment:
Q  165 taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    |||||||| ||| ||||||  |||||||||| |||||||||||||||| ||||||||||||||| | |||||||| || ||||||||||| |||| ||||    
T  43867527 taatgtaatagtaggaagacccttccagagagtgatccatcttttggacaaaatgcaagtttgagcggcctcttttgcgttcaaaaaggacagtacgtga 43867626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 38989212 - 38989109
Alignment:
Q  168 tgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtgatgg 267  Q
    ||||| ||||| |||| ||||||||||| |||||||||||||||| |||| ||| |||||||| |||| | | || || | |||||| ||||||||| ||    
T  38989212 tgtaatagtggaaagactcttccagagaatgatccatcttttggacaaaacgcatgtttgaacagcctgtattgcgtttagaaaggacagtatgtgaagg 38989113  T
Q  268 agaa 271  Q
    ||||    
T  38989112 agaa 38989109  T

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Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 52186925 - 52186834
Alignment:
Q  168 tgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagta 259  Q
    |||||||||||||||| || |||||||| |||||||||||||||| |||||||| |||||||| |||| ||| || |||| |||||||||||    
T  52186925 tgtaagagtgggaagactcctccagagaatgatccatcttttggacaaaatgcaggtttgaacggcctgttttgcgttcagaaaggagagta 52186834  T

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Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 6889225 - 6889148
Alignment:
Q  187 ttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| || ||| |||  | |||||| ||||||||||||    
T  6889225 ttccagagattgttccatcttttggatagaatgcaagtttgaacagcgtctatggtgtccaaaaaagagagtatgtga 6889148  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 32413704 - 32413626
Alignment:
Q  186 cttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||  |||||||| |||| ||||||||||||||||| || | |||||  |||||| ||||||||||||||    
T  32413704 cttccagagattcttccatcttgtggacaaaatgcaagtttgaacggcgtgtttggtgttcaaagaggagagtatgtga 32413626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 6844223 - 6844163
Alignment:
Q  170 taagagtgggaagagtcttccagagattgatccatcttttggataaaatgcaagtttgaac 230  Q
    ||||||||||||||   ||||| |||||| ||||||||||||||| |||||||||||||||    
T  6844223 taagagtgggaagatgtttccaaagattgttccatcttttggatagaatgcaagtttgaac 6844163  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 7115544 - 7115622
Alignment:
Q  186 cttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||  ||||||||||||| ||||  |||||||||||||| | |||||  |||||||| ||||||||||||    
T  7115544 cttccagagattcttccatcttttggacaaaacacaagtttgaactgcgtatttggtgttcaaaaaagagagtatgtga 7115622  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 7120616 - 7120694
Alignment:
Q  186 cttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||  ||||||||||||| ||||  |||||||||||||| | |||||  |||||||| ||||||||||||    
T  7120616 cttccagagattcttccatcttttggacaaaacacaagtttgaactgcgtatttggtgttcaaaaaagagagtatgtga 7120694  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 7124020 - 7124098
Alignment:
Q  186 cttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||  ||||||||||||| ||||  |||||||||||||| | |||||  |||||||| ||||||||||||    
T  7124020 cttccagagattcttccatcttttggacaaaacacaagtttgaactgcgtatttggtgttcaaaaaagagagtatgtga 7124098  T

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Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 7140748 - 7140812
Alignment:
Q  200 tccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||| ||||| |||||||||||||| | ||| | ||||||||| ||||||||||||    
T  7140748 tccatcttttggacaaaatacaagtttgaactgcgtatttagtattcaaaaaagagagtatgtga 7140812  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 8680362 - 8680426
Alignment:
Q  200 tccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||| ||||| |||||||||||||| | ||| | ||||||||| ||||||||||||    
T  8680362 tccatcttttggacaaaatacaagtttgaactgcgtatttagtattcaaaaaagagagtatgtga 8680426  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 7175432 - 7175510
Alignment:
Q  186 cttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||  |||||||  ||||||||||||||||||||||||| |  ||||  || || |||||||||||||||    
T  7175432 cttccagagattcttccatctagtggataaaatgcaagtttgaactgcgtgcttggtttttaacaaggagagtatgtga 7175510  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 8656649 - 8656727
Alignment:
Q  186 cttccagagattgatccatcttttggataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 264  Q
    ||||||||||||  ||||||||||||  ||||  |||||||||||||| | |||||  |||||||| ||||||||||||    
T  8656649 cttccagagattcttccatcttttggccaaaacacaagtttgaactgcgtatttggtgttcaaaaaagagagtatgtga 8656727  T

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