View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3218_low_11 (Length: 369)

Name: NF3218_low_11
Description: NF3218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3218_low_11
NF3218_low_11
[»] chr2 (46 HSPs)
chr2 (17-353)||(35329762-35330098)
chr2 (150-266)||(28803537-28803652)
chr2 (150-231)||(37053518-37053599)
chr2 (148-228)||(14209199-14209279)
chr2 (146-270)||(18962065-18962188)
chr2 (158-230)||(37474688-37474760)
chr2 (150-235)||(9478223-9478308)
chr2 (173-230)||(33192140-33192197)
chr2 (143-235)||(29430673-29430764)
chr2 (158-212)||(5045241-5045295)
chr2 (150-270)||(11513825-11513941)
chr2 (150-256)||(17952742-17952847)
chr2 (185-307)||(29316765-29316886)
chr2 (144-229)||(29429824-29429910)
chr2 (150-204)||(44606180-44606234)
chr2 (150-235)||(1493574-1493659)
chr2 (150-231)||(4550701-4550782)
chr2 (165-270)||(5133711-5133815)
chr2 (157-266)||(10143103-10143211)
chr2 (153-206)||(13864577-13864630)
chr2 (150-235)||(26964937-26965022)
chr2 (151-208)||(31461363-31461420)
chr2 (143-208)||(35459827-35459892)
chr2 (149-189)||(35713146-35713186)
chr2 (152-208)||(38239639-38239695)
chr2 (143-267)||(42817406-42817529)
chr2 (157-208)||(4090280-4090331)
chr2 (147-202)||(32837232-32837287)
chr2 (150-209)||(33197326-33197385)
chr2 (191-298)||(43141836-43141942)
chr2 (150-235)||(7103544-7103627)
chr2 (145-203)||(10190198-10190256)
chr2 (160-314)||(12215741-12215894)
chr2 (150-270)||(29503108-29503227)
chr2 (142-231)||(3673723-3673812)
chr2 (145-226)||(33267586-33267667)
chr2 (150-207)||(34339047-34339104)
chr2 (147-236)||(37845412-37845501)
chr2 (171-208)||(40758968-40759005)
chr2 (144-208)||(11393454-11393518)
chr2 (144-208)||(11410115-11410179)
chr2 (165-233)||(13866828-13866896)
chr2 (140-224)||(29729839-29729923)
chr2 (243-319)||(35378994-35379070)
chr2 (157-205)||(36114614-36114662)
chr2 (150-206)||(43431534-43431590)
[»] chr1 (50 HSPs)
chr1 (150-270)||(30259513-30259633)
chr1 (171-319)||(28689430-28689579)
chr1 (148-319)||(44031977-44032147)
chr1 (124-230)||(45999354-45999460)
chr1 (153-229)||(18434545-18434621)
chr1 (150-235)||(4276697-4276783)
chr1 (176-270)||(31517767-31517860)
chr1 (243-324)||(6279415-6279496)
chr1 (159-236)||(15360827-15360904)
chr1 (150-229)||(4200153-4200232)
chr1 (150-205)||(16982027-16982082)
chr1 (150-208)||(870969-871027)
chr1 (140-218)||(4202207-4202285)
chr1 (184-286)||(46252693-46252794)
chr1 (156-205)||(47002965-47003014)
chr1 (143-235)||(49516986-49517079)
chr1 (165-268)||(17422967-17423070)
chr1 (138-218)||(23373368-23373448)
chr1 (184-300)||(30371106-30371221)
chr1 (143-217)||(4338565-4338640)
chr1 (171-270)||(7218101-7218199)
chr1 (152-191)||(24857619-24857658)
chr1 (155-230)||(44928222-44928297)
chr1 (150-200)||(6659627-6659677)
chr1 (150-208)||(7200930-7200988)
chr1 (150-208)||(23895260-23895318)
chr1 (243-309)||(27140494-27140560)
chr1 (165-235)||(33527208-33527278)
chr1 (175-229)||(39777612-39777666)
chr1 (143-229)||(50998469-50998555)
chr1 (151-200)||(1662499-1662548)
chr1 (165-202)||(2773698-2773735)
chr1 (191-324)||(4548686-4548818)
chr1 (177-270)||(4622044-4622136)
chr1 (199-268)||(8130409-8130477)
chr1 (153-262)||(17269177-17269285)
chr1 (195-244)||(37272638-37272687)
chr1 (171-270)||(49365788-49365884)
chr1 (165-218)||(50319231-50319284)
chr1 (154-262)||(5421955-5422061)
chr1 (143-263)||(7273973-7274092)
chr1 (177-353)||(10199352-10199527)
chr1 (149-225)||(23370369-23370445)
chr1 (214-286)||(23902078-23902149)
chr1 (195-263)||(25006068-25006135)
chr1 (164-208)||(36151593-36151637)
chr1 (146-206)||(38651499-38651559)
chr1 (143-235)||(40304115-40304207)
chr1 (140-208)||(40357974-40358042)
chr1 (140-208)||(42550155-42550223)
[»] chr4 (52 HSPs)
chr4 (150-314)||(54325020-54325183)
chr4 (151-231)||(18630605-18630685)
chr4 (150-313)||(24929417-24929579)
chr4 (140-326)||(14011148-14011333)
chr4 (149-307)||(23819013-23819169)
chr4 (144-270)||(21157686-21157811)
chr4 (148-230)||(30024622-30024704)
chr4 (150-231)||(8469442-8469523)
chr4 (150-319)||(49219063-49219231)
chr4 (148-218)||(4191661-4191732)
chr4 (191-330)||(7693978-7694115)
chr4 (150-233)||(44319874-44319956)
chr4 (142-208)||(3662265-3662330)
chr4 (149-231)||(4071806-4071887)
chr4 (150-204)||(4471095-4471149)
chr4 (165-235)||(30338653-30338723)
chr4 (158-208)||(51044547-51044597)
chr4 (150-270)||(52735049-52735165)
chr4 (165-270)||(2996512-2996616)
chr4 (157-202)||(42641727-42641772)
chr4 (143-208)||(46796935-46797000)
chr4 (158-230)||(21593078-21593149)
chr4 (150-270)||(30207598-30207716)
chr4 (153-205)||(41088311-41088363)
chr4 (169-260)||(10192227-10192317)
chr4 (158-205)||(21683570-21683617)
chr4 (157-208)||(21952506-21952557)
chr4 (164-263)||(35958593-35958691)
chr4 (149-208)||(36734816-36734875)
chr4 (150-205)||(41050620-41050675)
chr4 (149-208)||(41606109-41606168)
chr4 (153-208)||(47970245-47970300)
chr4 (184-231)||(55870406-55870453)
chr4 (143-189)||(2980578-2980624)
chr4 (171-285)||(18628555-18628668)
chr4 (151-208)||(32920488-32920543)
chr4 (157-231)||(46013365-46013439)
chr4 (149-207)||(51555956-51556014)
chr4 (150-208)||(54277402-54277460)
chr4 (150-206)||(3891501-3891555)
chr4 (155-204)||(27405980-27406029)
chr4 (138-203)||(41603484-41603549)
chr4 (149-230)||(43372035-43372116)
chr4 (242-286)||(5131261-5131305)
chr4 (143-203)||(7749175-7749235)
chr4 (151-270)||(8422866-8422982)
chr4 (151-203)||(11264226-11264278)
chr4 (140-208)||(19422332-19422400)
chr4 (150-270)||(28581937-28582055)
chr4 (214-270)||(36048521-36048576)
chr4 (176-208)||(39438624-39438656)
chr4 (179-235)||(53626729-53626785)
[»] chr6 (37 HSPs)
chr6 (164-281)||(33787761-33787877)
chr6 (171-286)||(281859-281973)
chr6 (158-218)||(2456884-2456943)
chr6 (150-218)||(31672546-31672614)
chr6 (191-308)||(7785733-7785847)
chr6 (149-230)||(21959651-21959732)
chr6 (150-229)||(3169312-3169391)
chr6 (151-226)||(7713950-7714025)
chr6 (150-205)||(8349755-8349810)
chr6 (140-218)||(8010271-8010348)
chr6 (155-282)||(24836217-24836340)
chr6 (150-208)||(29269820-29269878)
chr6 (151-244)||(10452412-10452505)
chr6 (150-235)||(29274290-29274375)
chr6 (150-235)||(34671139-34671224)
chr6 (151-203)||(1810393-1810445)
chr6 (151-227)||(3204611-3204687)
chr6 (150-210)||(13360659-13360719)
chr6 (153-208)||(4248885-4248940)
chr6 (150-237)||(10032495-10032582)
chr6 (140-270)||(10400183-10400312)
chr6 (144-207)||(30523855-30523918)
chr6 (147-270)||(32386590-32386712)
chr6 (150-208)||(2514626-2514684)
chr6 (157-231)||(4006645-4006719)
chr6 (145-199)||(4247731-4247785)
chr6 (153-235)||(5550059-5550141)
chr6 (150-208)||(24774682-24774740)
chr6 (143-208)||(32513741-32513806)
chr6 (143-205)||(33911372-33911434)
chr6 (197-266)||(1401080-1401148)
chr6 (176-269)||(1402946-1403038)
chr6 (144-257)||(10016463-10016575)
chr6 (243-320)||(10476099-10476175)
chr6 (252-312)||(27909623-27909683)
chr6 (243-319)||(34939760-34939836)
chr6 (148-208)||(35095015-35095075)
[»] chr3 (36 HSPs)
chr3 (150-323)||(38462205-38462376)
chr3 (171-323)||(24887258-24887408)
chr3 (143-286)||(27792789-27792931)
chr3 (150-228)||(41028919-41028997)
chr3 (151-235)||(25183049-25183134)
chr3 (157-270)||(36139809-36139921)
chr3 (147-312)||(23785174-23785340)
chr3 (152-212)||(34958254-34958314)
chr3 (243-333)||(37273150-37273240)
chr3 (158-235)||(20192667-20192744)
chr3 (247-324)||(24603725-24603802)
chr3 (149-230)||(32703061-32703142)
chr3 (174-223)||(34954031-34954080)
chr3 (150-231)||(36101492-36101573)
chr3 (171-228)||(49586984-49587041)
chr3 (144-225)||(52450123-52450204)
chr3 (140-208)||(25185907-25185974)
chr3 (147-231)||(43116493-43116577)
chr3 (173-264)||(33405200-33405290)
chr3 (184-268)||(33965518-33965603)
chr3 (252-314)||(37825147-37825210)
chr3 (148-231)||(40122818-40122900)
chr3 (140-198)||(28283675-28283733)
chr3 (144-198)||(32663560-32663614)
chr3 (150-208)||(44374732-44374790)
chr3 (150-208)||(53457301-53457359)
chr3 (151-208)||(905058-905115)
chr3 (191-268)||(2201093-2201169)
chr3 (143-208)||(24268243-24268308)
chr3 (150-314)||(27290884-27291045)
chr3 (149-266)||(47584397-47584513)
chr3 (157-205)||(2128342-2128390)
chr3 (191-231)||(12923390-12923430)
chr3 (143-203)||(16790181-16790241)
chr3 (142-206)||(20349566-20349630)
chr3 (157-256)||(36783375-36783474)
[»] scaffold0024 (1 HSPs)
scaffold0024 (150-324)||(27500-27673)
[»] chr8 (33 HSPs)
chr8 (143-333)||(28769303-28769492)
chr8 (145-208)||(14482121-14482184)
chr8 (148-270)||(4558720-4558841)
chr8 (157-235)||(4763849-4763927)
chr8 (143-208)||(39392749-39392814)
chr8 (146-263)||(39551243-39551359)
chr8 (143-231)||(10727114-10727202)
chr8 (150-208)||(40728506-40728564)
chr8 (149-206)||(5226525-5226582)
chr8 (147-235)||(787167-787255)
chr8 (158-270)||(29973013-29973124)
chr8 (151-231)||(34770817-34770897)
chr8 (149-231)||(12972779-12972861)
chr8 (171-235)||(1470917-1470981)
chr8 (142-230)||(6918245-6918333)
chr8 (149-233)||(7026654-7026738)
chr8 (171-231)||(11000626-11000686)
chr8 (191-270)||(6509330-6509408)
chr8 (143-269)||(9836882-9837014)
chr8 (247-326)||(30259134-30259213)
chr8 (243-298)||(33553256-33553311)
chr8 (149-204)||(35298570-35298625)
chr8 (143-233)||(25872469-25872559)
chr8 (159-232)||(1112786-1112859)
chr8 (143-208)||(2364561-2364626)
chr8 (143-228)||(3645884-3645969)
chr8 (143-208)||(8062232-8062297)
chr8 (220-313)||(8062323-8062415)
chr8 (150-231)||(11056732-11056813)
chr8 (150-235)||(30988053-30988138)
chr8 (155-270)||(39866761-39866878)
chr8 (191-319)||(12361157-12361284)
chr8 (149-233)||(33209283-33209367)
[»] chr5 (44 HSPs)
chr5 (143-231)||(19177396-19177484)
chr5 (150-350)||(32172577-32172776)
chr5 (143-231)||(35135727-35135815)
chr5 (150-208)||(35960338-35960396)
chr5 (176-261)||(14295456-14295540)
chr5 (151-324)||(28586739-28586911)
chr5 (177-228)||(985584-985635)
chr5 (143-268)||(912677-912802)
chr5 (143-205)||(6733983-6734045)
chr5 (173-267)||(12975294-12975387)
chr5 (165-286)||(16889674-16889794)
chr5 (143-208)||(20982223-20982288)
chr5 (150-235)||(32059650-32059734)
chr5 (152-217)||(36646166-36646231)
chr5 (165-229)||(11667102-11667166)
chr5 (140-208)||(35095871-35095939)
chr5 (144-286)||(9202759-9202901)
chr5 (153-208)||(37063162-37063217)
chr5 (243-333)||(12242674-12242764)
chr5 (171-217)||(28578837-28578883)
chr5 (243-333)||(37611179-37611269)
chr5 (243-333)||(37787909-37787999)
chr5 (152-217)||(1019523-1019588)
chr5 (150-231)||(36539670-36539751)
chr5 (152-208)||(7096215-7096271)
chr5 (143-179)||(11790900-11790936)
chr5 (158-258)||(18857439-18857538)
chr5 (150-286)||(32194090-32194228)
chr5 (184-231)||(583838-583885)
chr5 (144-270)||(12425488-12425614)
chr5 (143-202)||(19113211-19113270)
chr5 (143-270)||(36542309-36542434)
chr5 (165-270)||(3970707-3970812)
chr5 (245-311)||(8177518-8177584)
chr5 (154-208)||(11095557-11095611)
chr5 (151-196)||(8985583-8985628)
chr5 (150-231)||(12407726-12407806)
chr5 (150-203)||(13224353-13224406)
chr5 (150-203)||(26516222-26516275)
chr5 (150-199)||(36638670-36638719)
chr5 (177-270)||(37690663-37690756)
chr5 (172-208)||(10303747-10303783)
chr5 (157-205)||(11835208-11835256)
chr5 (140-228)||(29116998-29117086)
[»] chr7 (48 HSPs)
chr7 (147-270)||(27481321-27481443)
chr7 (149-286)||(27548186-27548322)
chr7 (150-233)||(35536031-35536114)
chr7 (153-314)||(3610723-3610883)
chr7 (149-270)||(22759109-22759229)
chr7 (151-208)||(30496629-30496686)
chr7 (158-270)||(28165023-28165134)
chr7 (147-333)||(33894544-33894733)
chr7 (184-333)||(44151440-44151592)
chr7 (139-206)||(5373138-5373205)
chr7 (149-270)||(30456477-30456594)
chr7 (141-208)||(30751432-30751499)
chr7 (156-206)||(46223162-46223212)
chr7 (150-208)||(49060464-49060522)
chr7 (143-208)||(1431396-1431461)
chr7 (149-218)||(7244625-7244694)
chr7 (165-270)||(12110299-12110403)
chr7 (158-235)||(31002693-31002770)
chr7 (143-224)||(45593791-45593872)
chr7 (147-208)||(47004008-47004069)
chr7 (163-231)||(1417201-1417269)
chr7 (243-311)||(7244696-7244764)
chr7 (140-208)||(27626212-27626280)
chr7 (186-270)||(29363478-29363561)
chr7 (150-230)||(39551614-39551694)
chr7 (142-320)||(46081949-46082129)
chr7 (191-270)||(36370635-36370712)
chr7 (176-319)||(44910554-44910696)
chr7 (156-270)||(1350269-1350382)
chr7 (150-208)||(2223072-2223130)
chr7 (150-208)||(11721314-11721372)
chr7 (155-205)||(15328535-15328585)
chr7 (150-208)||(25511551-25511609)
chr7 (193-270)||(33346774-33346850)
chr7 (221-319)||(33645939-33646035)
chr7 (143-209)||(36598408-36598474)
chr7 (162-235)||(5272881-5272954)
chr7 (140-209)||(29574688-29574757)
chr7 (157-234)||(30133980-30134057)
chr7 (159-208)||(35808992-35809041)
chr7 (150-203)||(47006972-47007025)
chr7 (191-243)||(2048094-2048146)
chr7 (166-230)||(5006575-5006639)
chr7 (152-208)||(24973870-24973926)
chr7 (158-286)||(27378839-27378965)
chr7 (143-187)||(27389300-27389344)
chr7 (140-208)||(42281587-42281655)
chr7 (135-203)||(46091505-46091573)
[»] scaffold0590 (1 HSPs)
scaffold0590 (151-208)||(1162-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (151-208)||(2756-2813)
[»] scaffold0091 (1 HSPs)
scaffold0091 (149-206)||(5942-5999)
[»] scaffold0147 (1 HSPs)
scaffold0147 (226-323)||(12678-12775)
[»] scaffold0020 (1 HSPs)
scaffold0020 (165-353)||(159917-160103)
[»] scaffold0654 (1 HSPs)
scaffold0654 (150-208)||(6725-6783)
[»] scaffold0022 (1 HSPs)
scaffold0022 (150-216)||(143141-143207)
[»] scaffold0014 (1 HSPs)
scaffold0014 (150-208)||(116644-116702)
[»] scaffold0110 (1 HSPs)
scaffold0110 (143-235)||(4284-4377)


Alignment Details
Target: chr2 (Bit Score: 321; Significance: 0; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 17 - 353
Target Start/End: Complemental strand, 35330098 - 35329762
Alignment:
Q  17 atgaagagacctcctggcgaaggtgtactcgttacttgggtatgttaattcttttcacccatcttgactctttattaatcggtgaaagttattatggccc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35330098 atgaagagacctcctggcgaaggtgtactcgttacttgggtatgttaattcttttcacccatcttgactctttattaatcggtgaaagttattatggccc 35329999  T
Q  117 tgcttggataaacaatttaattaaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgcttt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35329998 tgcttggataaacaatttaattaaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgcttt 35329899  T
Q  217 cacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagat 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  35329898 cacataagctataagctgtctacataaagctatcttggagagcttatggaaataagctggaaacaacttaggggcatgtcattaactgtttccataagat 35329799  T
Q  317 ctcacaaataatctcactattgtttatggtagtagat 353  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  35329798 ctcacaagtaatctcactagtgtttatggtagtagat 35329762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 266
Target Start/End: Complemental strand, 28803652 - 28803537
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||||||||| ||||  ||||  |||||| |||||| |||||||||||||||||| ||| ||||| |||||||| ||| ||| | | |||| ||||    
T  28803652 ttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaa-ctat 28803554  T
Q  250 cttggagagcttatgga 266  Q
    | |||||||||||||||    
T  28803553 cctggagagcttatgga 28803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 37053518 - 37053599
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||||||||| ||||| ||| |||||||| |||||| || ||||||||||||||| ||| ||||| ||||| ||||||    
T  37053518 ttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataag 37053599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 14209199 - 14209279
Alignment:
Q  148 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 228  Q
    ||||||||||||||||||| ||  ||| ||||||| |||||| ||||||||||||| |||| ||| ||||| |||||||||    
T  14209199 gtttatcatataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 270
Target Start/End: Complemental strand, 18962188 - 18962065
Alignment:
Q  146 gtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaag 245  Q
    ||||||||||| |||||| ||||| || | ||||||  |||||| ||||||||||||||| || ||| ||||| ||||||||||| || | | ||| |||    
T  18962188 gtgtttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcat-aag 18962090  T
Q  246 ctatcttggagagcttatggaaata 270  Q
    ||||| |||||||  ||||||||||    
T  18962089 ctatcatggagagactatggaaata 18962065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 37474688 - 37474760
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||| | ||| ||||| |||| ||||||    
T  37474688 taagtgtttatgcataaactatttcgataacaaaaaataaaataaagtcgatctgttttcatataaactataa 37474760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 9478223 - 9478308
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||||||||||||||||| |||| ||||||| ||||||  |||||||||||| ||||  |  ||||| |||||||||| |||||    
T  9478223 ttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctatatgctgt 9478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 33192140 - 33192197
Alignment:
Q  173 aaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||| ||||| |||||    
T  33192140 aaactatttctataacataagataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 29430673 - 29430764
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||| |||||||||| ||| ||||||| |||| ||||||| |||||| ||| |||| ||||||||| ||| ||||  ||||||||||||||||    
T  29430673 taagcgtttatcatacaagggtttatgtataagctatttctataacaaaagttaaa-taaagtcaaactgttttcttataagctataagctgt 29430764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 5045295 - 5045241
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctg 212  Q
    |||||||||||| |||| ||||||  |||||| ||||||||||||||||||||||    
T  5045295 taagtgtttatgtataagctatttttataacaaaagataaaataaagtcaagctg 5045241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 270
Target Start/End: Original strand, 11513825 - 11513941
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||||||| ||||||| ||||  |||| |   |||| ||||||||||||||||||  || ||||| |||||||||||| ||| | ||| |||||||    
T  11513825 ttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcat-aagctat 11513920  T
Q  250 cttggagagcttatggaaata 270  Q
    | |||||| ||| ||||||||    
T  11513921 catggagaacttttggaaata 11513941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 17952847 - 17952742
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||||||| | ||||  |||| ||||||| |||||| |||||||||||||||||| ||  ||||| |||||||| ||| ||| | ||| |||||||    
T  17952847 ttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcat-aagctat 17952749  T
Q  250 cttggag 256  Q
    | |||||    
T  17952748 cctggag 17952742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 307
Target Start/End: Complemental strand, 29316886 - 29316765
Alignment:
Q  185 taacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaact 284  Q
    ||||| |||||||||||| || ||  || |||||||||| ||||||||||| | ||| | ||||||||||||| ||||||||||||  ||| ||| ||||    
T  29316886 taacagaagataaaataaggttaaattgttttcacataatctataagctgttttcatca-gctatcttggagaacttatggaaataagctgaaaagaact 29316788  T
Q  285 taggggcatgtcattaactgttt 307  Q
    || |  |||||||| | ||||||    
T  29316787 tatgaacatgtcataagctgttt 29316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 29429910 - 29429824
Alignment:
Q  144 aagtgtttatcatataagtgtttatgcataaacta-tttccataacataagataaaataaagtcaagctgctttcacataagctata 229  Q
    |||| ||||||||||||| | ||| | |||||||| |||  || ||| |||||||||||||||||| ||| ||||||||||||||||    
T  29429910 aagtttttatcatataagagcttacgtataaactacttttaatgacaaaagataaaataaagtcaaactgttttcacataagctata 29429824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 44606234 - 44606180
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaag 204  Q
    |||| ||||||||||||||| |||| |||||| ||||||| ||||||||||||||    
T  44606234 ttattatataagtgtttatgtataagctattttcataacaaaagataaaataaag 44606180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 1493659 - 1493574
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||||||||| || ||||  ||||||| |||| ||||||  ||||||||||||||| || || ||||| |||||||||| |||||    
T  1493659 ttatcatataattgcttatttataaactctttctataacaatagataaaataaagtctagttgttttcatataagctatatgctgt 1493574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 4550701 - 4550782
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||| ||||||| ||||| ||||  | ||||||||| | |||||||||||| ||||||||| ||||| |||| |||||||    
T  4550701 ttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataag 4550782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 5133711 - 5133815
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatg 264  Q
    ||||| |||| ||||||| |||||| ||||||||||||||  || ||| ||| | ||||| |||||||||| | || |||| |||||  |||||||||||    
T  5133711 ttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttca-aaagttatctaagagagcttatg 5133809  T
Q  265 gaaata 270  Q
    ||||||    
T  5133810 gaaata 5133815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 10143103 - 10143211
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggag 256  Q
    ||||||| ||||| ||||  |||||| |||||| |||||||||| ||||||| ||| ||| | |||||||||||| | | | ||| |||||||| |||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcat-aagctatcatggag 10143201  T
Q  257 agcttatgga 266  Q
    || |||||||    
T  10143202 agtttatgga 10143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 13864577 - 13864630
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    ||||||||||||||||| |||| ||||||| |||||| ||| ||||||||||||    
T  13864577 tcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 26965022 - 26964937
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||| |||||||||||| | |||| ||||||| |||||| ||||| |||| |||||||||| | ||  ||||| |||||||||||    
T  26965022 ttatcgtataagtgtttacgaataagctatttctataacacaagattaaattaagtcaagcttcgtttgcataatctataagctgt 26964937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 31461363 - 31461420
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||| ||||  |||| ||||||| |||||| ||||||||||||||||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaa 31461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 35459827 - 35459892
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||||||||| || || |||| ||||||  ||| || ||||||||||||||||||    
T  35459827 taagtgtttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaa 35459892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 35713146 - 35713186
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataaca 189  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  35713146 tttatcatataagtgtttatgtataaactatttccgtaaca 35713186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 38239695 - 38239639
Alignment:
Q  152 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||| |||||||||||| |||| ||||||| |||||| |||||||||| |||||||    
T  38239695 atcatgtaagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaa 38239639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 42817529 - 42817406
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata 242  Q
    |||| |||||||||||||||||| ||  |||   |||||| ||| || |||||||||| ||||||||||| ||||| |||||  |||| |||| | |||     
T  42817529 taagcgtttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcat- 42817431  T
Q  243 aagctatcttggagagcttatggaa 267  Q
    |||||||  || |||||||||||||    
T  42817430 aagctattctgaagagcttatggaa 42817406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 4090280 - 4090331
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||| || |||| |||| |||||||||||||| ||||||||||||||||||    
T  4090280 ataagggtgtatgaataagctatttccataacacaagataaaataaagtcaa 4090331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 32837232 - 32837287
Alignment:
Q  147 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataa 202  Q
    |||||||||||||||   |||||||||| ||||||| |||||| ||||||||||||    
T  32837232 tgtttatcatataagcacttatgcataatctatttctataacaaaagataaaataa 32837287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 33197385 - 33197326
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaag 209  Q
    |||||||||||||| ||||  |||| ||||||| |||||| |||||| ||||||||||||    
T  33197385 ttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaag 33197326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 298
Target Start/End: Original strand, 43141836 - 43141942
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttagggg 290  Q
    |||||||| |||||||||  || || || |||||||||||| ||| | ||||| |||||| || |||| |||||||||||   || |||||||||| |||    
T  43141836 aagataaagtaaagtcaaattgtttccatataagctataagatgttttcataa-gctatcctgaagagtttatggaaataaaatgaaaacaacttatggg 43141934  T
Q  291 catgtcat 298  Q
    ||||||||    
T  43141935 catgtcat 43141942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 7103627 - 7103544
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||||||| ||| ||||| | ||||||| |  ||||||  ||||||||||||||||| ||| ||| | ||||||||||||||||    
T  7103627 ttatcatatatgtgcttatgtagaaactatatttataaca--agataaaataaagtcaaactgttttaatataagctataagctgt 7103544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 10190198 - 10190256
Alignment:
Q  145 agtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    |||| |||||||||||||| ||||| |||||||||||  |||||| | |||||||||||    
T  10190198 agtggttatcatataagtgcttatgtataaactatttttataacaaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 314
Target Start/End: Original strand, 12215741 - 12215894
Alignment:
Q  160 agtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagc 259  Q
    |||| ||||| |||||||||||| | |||| |||||||||||||||| | | | || || ||| |||||||||||| |  || |||| ||| | ||||||    
T  12215741 agtgcttatgtataaactatttctacaacaaaagataaaataaagtcgacccgtttccatatatgctataagctgtttttat-aagccatccttgagagc 12215839  T
Q  260 ttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataag 314  Q
    |||||| ||||   || ||||| |||| || |||||||| | || ||||||||||    
T  12215840 ttatgggaatatggtgaaaacagcttatggacatgtcataagctatttccataag 12215894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 29503227 - 29503108
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagc-ta 248  Q
    |||| ||| ||||||||||| |||   |||||| ||||||  ||||||||||||||||| ||  ||||| | ||| |||||| ||| | ||||||   ||    
T  29503227 ttattatagaagtgtttatgtatatgatatttctataaca--agataaaataaagtcaaactattttcaaagaagttataagatgtttccataaactata 29503130  T
Q  249 tcttggagagcttatggaaata 270  Q
    ||||||||||||||||||||||    
T  29503129 tcttggagagcttatggaaata 29503108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 3673723 - 3673812
Alignment:
Q  142 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||||| ||||||||||| ||||| || |  |||||| |||||| || |||||||||||| ||  || ||||| ||||| ||||||    
T  3673723 ttaagtgtttgtcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataag 3673812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 33267667 - 33267586
Alignment:
Q  145 agtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagct 226  Q
    |||| |||||||||||||| ||||| |||| ||||||| |||||| |   ||||||||||| || ||| ||||| |||||||    
T  33267667 agtggttatcatataagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataagct 33267586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 34339047 - 34339104
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtca 207  Q
    |||||||||||||| ||||| ||||||| |||| ||| |  |||||||||||||||||    
T  34339047 ttatcatataagtgcttatgtataaactttttctatagctaaagataaaataaagtca 34339104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 37845501 - 37845412
Alignment:
Q  147 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtc 236  Q
    ||||||||||||||||  ||||  |||  ||||||  |||| | || ||||||||||||| ||||  |||||| ||||||||||||||||    
T  37845501 tgtttatcatataagttcttatttatatgctatttttataataaaatataaaataaagtcgagcttgtttcacgtaagctataagctgtc 37845412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 40758968 - 40759005
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaa 208  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  40758968 ataagctatttccataacaaaagataaaataaagtcaa 40759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 11393518 - 11393454
Alignment:
Q  144 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||||||||| ||||  |||| ||||||| ||| || |||||| |||||| ||||    
T  11393518 aagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaa 11393454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 11410179 - 11410115
Alignment:
Q  144 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||||||||| ||||  |||| ||||||| ||| || |||||| |||||| ||||    
T  11410179 aagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaa 11410115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 13866828 - 13866896
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 233  Q
    ||||| |||||||||||| ||| || |||||||||| ||||||| ||| ||| | |||| |||||||||    
T  13866828 ttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataagct 13866896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 29729839 - 29729923
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataag 224  Q
    ||||||||| ||||| |||||||| ||| | |||  ||||||  |||||| |||||||| |||||| || ||| |||||||||||    
T  29729839 aattaagtgattatcgtataagtgcttacgtatatgctatttttataacaaaagataaattaaagtgaaactgttttcacataag 29729923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 35379070 - 35378994
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctc 319  Q
    |||||||||||||||||||||| |||||  ||| |||||||||| |  || ||||| | |||||| |||||| ||||    
T  35379070 aagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctc 35378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 36114662 - 36114614
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    ||||||| |||||||||| ||| ||| |||||| |||||||||||||||    
T  36114662 ataagtgcttatgcataacctagttctataacaaaagataaaataaagt 36114614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 43431590 - 43431534
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    |||||||||||||||| ||| ||||  |||||| |||||| |||||||| |||||||    
T  43431590 ttatcatataagtgttaatgtataagttatttcaataacaaaagataaagtaaagtc 43431534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 7e-31; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 30259633 - 30259513
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||| ||||| ||||||| || ||||||| |||||| || ||||||||||||||| ||||||| | |||||||||||||||| | |||||||||||    
T  30259633 ttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctat 30259534  T
Q  250 cttggagagcttatggaaata 270  Q
    | |||||||||||||||||||    
T  30259533 catggagagcttatggaaata 30259513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 319
Target Start/End: Complemental strand, 28689579 - 28689430
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata-aagctatcttggagagcttatggaaat 269  Q
    |||||||||||| ||| || |||||||||||||  ||||  | ||||| |||||||||||| ||| | |||| ||||||||||||| |||||||| ||||    
T  28689579 ataaactatttctatatcaaaagataaaataaatgcaagtggttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaat 28689480  T
Q  270 agcctggaaacaacttaggggcatgtcattaactgtttccataagatctc 319  Q
    |  ||| |||||||||| || |||||||| | |||||||| |||| ||||    
T  28689479 aagctgaaaacaacttatggacatgtcataagctgtttccgtaagttctc 28689430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 319
Target Start/End: Complemental strand, 44032147 - 44031977
Alignment:
Q  148 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagct 247  Q
    |||||||||||||||||||||| |||| |  |||| |||||| ||| ||||||||||||||  || ||||| ||||||||||| || | | | | ||| |    
T  44032147 gtttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttc-ttaagtt 44032049  T
Q  248 atcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctc 319  Q
    |||||| |||||||||||||||   ||| ||| | |||| || |||||||||| ||| || |||||| ||||    
T  44032048 atcttgaagagcttatggaaattagctgaaaatagcttatggacatgtcattagctgcttacataagctctc 44031977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 45999460 - 45999354
Alignment:
Q  124 ataaacaatttaattaaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataa 223  Q
    |||||||| ||||||||||||| |  ||||   ||||||| | ||| |||| ||||||| |||||| ||||||| |||||||||| ||||||||| ||||    
T  45999460 ataaacaacttaattaaattaaattcttatagcataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataa 45999361  T
Q  224 gctataa 230  Q
    |||||||    
T  45999360 gctataa 45999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 18434621 - 18434545
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 229  Q
    ||||||||||| || || || | |||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||    
T  18434621 tcatataagtgcttctgtattacctatttccataacaaaagataaaataaagtcaaactgctctcatataagctata 18434545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 4276783 - 4276697
Alignment:
Q  150 ttatcatataagtgttt-atgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||||||||| ||||| | | |||||||||||| |||||| ||||||| |||||||||  ||| ||||||||||||||||| ||||    
T  4276783 ttatcatataaatgttttaagtataaactatttctataacaaaagataatataaagtcatactgttttcacataagctataacctgt 4276697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 31517860 - 31517767
Alignment:
Q  176 ctatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    ||||||| | |||| ||||||||||||||| ||  || ||||| |||||||||||||||||| ||| || || |||||||||||||||| |||||    
T  31517860 ctatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcat-aatctgtcttggagagcttatgaaaata 31517767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 324
Target Start/End: Original strand, 6279415 - 6279496
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaa 324  Q
    |||||||| | |||||||||||||||||  ||| |||||||||| || |||||  ||||||||||||||||| |||| ||||    
T  6279415 aagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgtggttaactgtttccataagctctctcaaa 6279496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 15360827 - 15360904
Alignment:
Q  159 aagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtc 236  Q
    ||||||||||| || |  |||||| |||||| |||||||||||||||||| ||| ||||| |||||||||||| ||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgtc 15360904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 4200153 - 4200232
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 229  Q
    ||||||| |||||||||||  ||||  |||||  |||||| ||||||||||||||||||| || ||||| ||||||||||    
T  4200153 ttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctata 4200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 16982082 - 16982027
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    |||||||||||||||||||| ||||  |||||| |||||| |||||||||||||||    
T  16982082 ttatcatataagtgtttatgtataacttatttcgataacaaaagataaaataaagt 16982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 870969 - 871027
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||| ||||| |||||||||||  |||||| |||||||||| |||||||    
T  870969 ttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaa 871027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 4202285 - 4202207
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 218  Q
    ||||||| |||||||||||||||| ||| | ||||  |||||| |||||| ||||||||  |||||||||||| |||||    
T  4202285 aattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaagctgttttca 4202207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 46252794 - 46252693
Alignment:
Q  184 ataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaac 283  Q
    |||||| ||||||||||||||| ||  | ||||  |||||||| |||  | || |||||| |||||||||||||||||||| ||||| |||| |||||||    
T  46252794 ataacaaaagataaaataaagttaaatttcttttgcataagctttaaagtatccacataa-gctatcttggagagcttatgaaaataacctgaaaacaac 46252696  T
Q  284 tta 286  Q
    |||    
T  46252695 tta 46252693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 47003014 - 47002965
Alignment:
Q  156 tataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    |||||||||||||||||||| |||||| |||| | |||||||||||||||    
T  47003014 tataagtgtttatgcataaattatttcgataataaaagataaaataaagt 47002965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 49516986 - 49517079
Alignment:
Q  143 taagtgtttatcatataagt-gtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||| ||||||||||||| | |||| || ||||  |||||| |||||| ||||||||||||||||||  || |||||  |||||||||||||||    
T  49516986 taagcgtttatcatataaattgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgt 49517079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 17423070 - 17422967
Alignment:
Q  165 ttatgcataaactatttccataacataa-gataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttat 263  Q
    ||||| |||| || |||| |||||| || |||||||||||||||||||| ||||| |||||||||||| ||| | ||| | |||||| ||||||| ||||    
T  17423070 ttatgtataagctttttctataacaaaacgataaaataaagtcaagctgatttcatataagctataagttgttttcat-atgctatcatggagaggttat 17422972  T
Q  264 ggaaa 268  Q
     ||||    
T  17422971 agaaa 17422967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 23373448 - 23373368
Alignment:
Q  138 taaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 218  Q
    ||||||||||| ||||||||||| || ||| | || | ||||||| ||| || |||||||||||||||||| ||| |||||    
T  23373448 taaattaagtgcttatcatataactgcttacgtattagctatttctatatcaaaagataaaataaagtcaatctgttttca 23373368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 30371106 - 30371221
Alignment:
Q  184 ataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaac 283  Q
    |||||| ||||||||||||| ||||  || ||||| |||||||||||| ||| | ||| |||  || ||||||||| ||| ||||||  ||| |||||||    
T  30371106 ataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcat-aagacattttggagagcgtattgaaataagctgaaaacaac 30371204  T
Q  284 ttaggggcatgtcatta 300  Q
    ||| || ||||||||||    
T  30371205 ttatggacatgtcatta 30371221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 4338565 - 4338640
Alignment:
Q  143 taagtgtttatcatataagtg-tttatgcataaactatttccataacataagataaaataaagtcaagctgctttc 217  Q
    ||||||||||||||||||||| |||||| ||||  ||| || | |||| |||||||||||||||||| ||| ||||    
T  4338565 taagtgtttatcatataagtgctttatgtataagttatgtctagaacagaagataaaataaagtcaaactgttttc 4338640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 7218199 - 7218101
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    |||| |||||||||||| | ||| ||||||||||||||  || ||||| |||||||||||| ||| | ||| || ||||| |||||| |||||| |||||    
T  7218199 ataatctatttccataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcat-aacctatcctggagaacttatgaaaata 7218101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 24857658 - 24857619
Alignment:
Q  152 atcatataagtgtttatgcataaactatttccataacata 191  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  24857658 atcatataagtgtttatgtataaactatttctataacata 24857619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 44928297 - 44928222
Alignment:
Q  155 atataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    ||||||||| ||||| |||| |||||||  |  || ||||||| |||||||||||||| ||||| |||||||||||    
T  44928297 atataagtgcttatgtataagctatttcagttgcaaaagataagataaagtcaagctgttttcatataagctataa 44928222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 6659627 - 6659677
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaat 200  Q
    |||||||||||||| ||||| |||||||||||| ||| || ||||||||||    
T  6659627 ttatcatataagtgcttatgtataaactatttctatagcaaaagataaaat 6659677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 7200988 - 7200930
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||| ||||||||||   |||| |||||||||||| | ||||||||||||||||||    
T  7200988 ttatcatgtaagtgtttacttataagctatttccataataaaagataaaataaagtcaa 7200930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 23895260 - 23895318
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||  ||||| |||| ||||||| |||||| ||||||||||||| ||||    
T  23895260 ttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaa 23895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 27140494 - 27140560
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttcc 309  Q
    |||||||| ||||||||||||| |||||  ||| |||||||||| || |||||||| | ||||||||    
T  27140494 aagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttcc 27140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 33527278 - 33527208
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||| |||| ||||||| | |||| ||||||||||| |||||| ||| ||||| |||| |||||||||||    
T  33527278 ttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgt 33527208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 39777612 - 39777666
Alignment:
Q  175 actatttccataacataagataaaataaagtcaagctgctttcacataagctata 229  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||| | ||||||||    
T  39777612 actatttctataacaaaagatagaataaagtcaaactgctttcatacaagctata 39777666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 50998469 - 50998555
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 229  Q
    |||| |||||||||||| | | ||||| |||| |||||||  ||||| ||||||||| ||| |||| || |||||| ||||||||||    
T  50998469 taagcgtttatcatataggcgcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctata 50998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 1662499 - 1662548
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaat 200  Q
    ||||||||||||||||||| |||||||| ||| |||||  ||||||||||    
T  1662499 tatcatataagtgtttatgtataaactacttctataacgaaagataaaat 1662548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 2773735 - 2773698
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataa 202  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  2773735 ttatgcataagctatttccataacagaagataaaataa 2773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 324
Target Start/End: Original strand, 4548686 - 4548818
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttagggg 290  Q
    |||||||||||||||||| ||| ||| | | |||  ||||||||| | ||||| |||||||||||||||||  | |||||  ||  ||||||||||  ||    
T  4548686 aagataaaataaagtcaaactgtttttatacaagtcataagctgttttcataa-gctatcttggagagcttcagaaaataagctaaaaacaacttacagg 4548784  T
Q  291 catgtcattaactgtttccataagatctcacaaa 324  Q
    |||||||| |  ||||||||| || |||| ||||    
T  4548785 catgtcataagttgtttccattaggtctctcaaa 4548818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 270
Target Start/End: Original strand, 4622044 - 4622136
Alignment:
Q  177 tatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    |||||| |||||| ||||| |||| || |||| ||  ||||| |||||||||||||||| | ||| | ||||||||||||||||| || |||||    
T  4622044 tatttctataacaaaagatcaaatgaattcaaactcttttcatataagctataagctgtttccat-atgctatcttggagagcttgtgaaaata 4622136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 8130409 - 8130477
Alignment:
Q  199 ataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaa 268  Q
    |||||||||| ||| |||||||||||||||||| ||| | ||| |||||||| |||| | ||||||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcat-aagctatcatggaaaacttatggaaa 8130477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 17269177 - 17269285
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatctt 252  Q
    ||||||||||| ||||| ||||  |||||| | |||| |||  |||||||||||||  || ||||| |||||| ||||| ||| | ||| |||||||| |    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcat-aagctatcct 17269275  T
Q  253 ggagagctta 262  Q
    ||||||||||    
T  17269276 ggagagctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 37272687 - 37272638
Alignment:
Q  195 taaaataaagtcaagctgctttcacataagctataagctgtctacataaa 244  Q
    |||||||||||||| ||| ||||| |||||||||||||||| | ||||||    
T  37272687 taaaataaagtcaatctgttttcatataagctataagctgttttcataaa 37272638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 49365884 - 49365788
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    ||||||| ||||  ||||| ||||||||||| ||||||  || ||||| | ||||||||| |||| || |   |||||||||| ||||||||||||||||    
T  49365884 ataaactgtttcagtaacaaaagataaaatagagtcaaattgttttcatacaagctataaactgtttata---agctatcttgaagagcttatggaaata 49365788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 50319231 - 50319284
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 218  Q
    ||||| |||| ||||||| |||||| ||||||||||||||||||| || |||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttca 50319284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 5422061 - 5421955
Alignment:
Q  154 catataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttg 253  Q
    |||||||||| ||||  |||| |||||||||| ||| ||||||||||| ||||||  || ||||  |||||||||||| ||| |  || ||||||||||     
T  5422061 catataagtgcttatt-ataagctatttccatgacaaaagataaaatatagtcaaattgttttcttataagctataagttgttttgat-aagctatctta 5421964  T
Q  254 gagagctta 262  Q
    |||||||||    
T  5421963 gagagctta 5421955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 263
Target Start/End: Complemental strand, 7274092 - 7273973
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata 242  Q
    |||||| ||||||||||| || ||||| |||   |||||  |||||| ||||| ||||||||||||  || ||||| | ||| |||||||||| | ||||    
T  7274092 taagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccata 7273993  T
Q  243 aagctatcttggagagcttat 263  Q
    || ||| |||| |||||||||    
T  7273992 aa-ctaccttgaagagcttat 7273973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 353
Target Start/End: Complemental strand, 10199527 - 10199352
Alignment:
Q  177 tatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctgg 276  Q
    |||||| |||||  |||||||||||||||||| ||  ||||  |||| | ||||||| | | ||||| ||||| || ||||||||||| |||||  |||     
T  10199527 tatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataa-gctattttagagagcttatgaaaataagctga 10199429  T
Q  277 aaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcactattgtttatggtagtagat 353  Q
    |||||||||| |  |||||||| | || ||| ||| || |||| |||||| | |||| | || ||||| ||||||||    
T  10199428 aaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgcttatgttagtagat 10199352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 23370445 - 23370369
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagc 225  Q
    ||||||||||||||  ||| | |||| ||||||| || ||| ||||||||| ||||| |||||| ||||| ||||||    
T  23370445 tttatcatataagtacttacgtataagctatttctattacaaaagataaaacaaagtgaagctggtttcatataagc 23370369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 23902149 - 23902078
Alignment:
Q  214 tttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaactta 286  Q
    ||||| |||||||||||| ||| | || ||||||||||| |||||||||||||| ||  ||| ||||||||||    
T  23902149 tttcatataagctataagttgttttca-aaagctatcttagagagcttatggaagtaagctgaaaacaactta 23902078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 25006135 - 25006068
Alignment:
Q  195 taaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttat 263  Q
    ||||||||||||||  || ||||| |||||||||||| ||| | ||| ||||||||||||||| |||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcat-aagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 36151637 - 36151593
Alignment:
Q  164 tttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||| |||| ||||||| |||||| ||||||||||||||||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaagtcaa 36151593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 38651559 - 38651499
Alignment:
Q  146 gtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    ||||||||||| |||||| ||||| |||| ||| ||| |||||| |||||||| |||||||    
T  38651559 gtgtttatcatgtaagtgcttatgtataagctaattctataacaaaagataaactaaagtc 38651499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 40304207 - 40304115
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||||||||||||| | || ||| | |||| ||||||  |||||| ||||||||||||| |||   || ||||| ||||| ||||||||||    
T  40304207 taagtgtttatcatattattgcttaggtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgt 40304115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 40358042 - 40357974
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||| |||| |||||||||  |||| |||| ||||||| ||||||   ||||||||||||||||    
T  40358042 aattaagtgcttattatataagtgactatgtataagctatttctataacaatggataaaataaagtcaa 40357974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 42550155 - 42550223
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||||||| ||||| ||||| |||| ||| ||| |  | | ||||||||||||||||||    
T  42550155 aattaagtgtttatcatacaagtgcttatgtataagctagttctacgataaaagataaaataaagtcaa 42550223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 150 - 314
Target Start/End: Complemental strand, 54325183 - 54325020
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||||||||| || || |||||||||||| || ||| |||||||||||||||||| ||| ||||| |||||||||||||| | | || ||||||||    
T  54325183 ttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttca-aaagctat 54325085  T
Q  250 cttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataag 314  Q
    | ||||||| ||||||| |||  ||| ||||| |||| || ||| |||| |||| ||||| ||||    
T  54325084 catggagagtttatggagataaactgaaaacagcttatggacatatcataaactatttccgtaag 54325020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 18630605 - 18630685
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    ||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||   | ||||| ||||||||||||    
T  18630605 tatcatataagcgcttatgcataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataag 18630685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 313
Target Start/End: Original strand, 24929417 - 24929579
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    ||||||||||| ||||| || || ||||||||| |||||| |||||||||||||||| | ||| ||||| | |||||||||| ||| | |||||| || |    
T  24929417 ttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaa-ctct 24929515  T
Q  250 cttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataa 313  Q
      | |||||||||||||||||  ||| |||||| ||| |  |||| ||| | ||||||||||||    
T  24929516 actagagagcttatggaaataagctgaaaacaatttatgaacatgccataagctgtttccataa 24929579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 326
Target Start/End: Original strand, 14011148 - 14011333
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctac 239  Q
    ||||||||||||||||||||| || || || |||| ||| ||  |||||| ||||||||||||||  ||  || ||  | |||||||| ||  ||| |||    
T  14011148 aattaagtgtttatcatataaatgattgtgtataagctagttttataacaaaagataaaataaaggtaaattggttatatataagctacaaaatgtttac 14011247  T
Q  240 ataaagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaata 326  Q
    |||| ||||||||||||||||||||||||||  ||| ||||| ||||  | ||||| || |||| ||| |||||| |||| ||||||    
T  14011248 ataa-gctatcttggagagcttatggaaataagctgaaaacagcttaaagacatgtgataaactctttgcataagctctcccaaata 14011333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 23819013 - 23819169
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagcta 248  Q
    ||||||||| ||||||||||| ||||  ||||||||||||| || |||||||  |||||| ||| ||||| ||||| |||||  ||| | ||| ||||||    
T  23819013 tttatcatacaagtgtttatgtataagttatttccataaca-aatataaaatgtagtcaaactgttttcatataagttataacatgttttcat-aagcta 23819110  T
Q  249 tcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgttt 307  Q
    ||||| ||||||||| ||||||   || |||||||||| || |||||||| | ||||||    
T  23819111 tcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttt 23819169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 21157686 - 21157811
Alignment:
Q  144 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataa 243  Q
    |||||||||||||||||||| ||||| || | ||||||  |||||| |  ||||| ||||||||| ||| |||||  ||||||||||| ||| | ||| |    
T  21157686 aagtgtttatcatataagtgcttatgtatcagctattttgataacaaagtataaactaaagtcaaactgttttcatgtaagctataagatgttttcat-a 21157784  T
Q  244 agctatcttggagagcttatggaaata 270  Q
     |||||| || ||||||||||||||||    
T  21157785 tgctatcctgaagagcttatggaaata 21157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 30024622 - 30024704
Alignment:
Q  148 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    |||||||||||||||  ||||||||||  |||||| |||||| ||||||||||||||| ||  || ||||| |||||||||||    
T  30024622 gtttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 8469523 - 8469442
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||||||||| ||||||| ||||||| || |||||| |||||||||||| |||||  |||||||| ||| ||| ||||    
T  8469523 ttatcatataagtgcttatgcagaaactatatcaataacagaagataaaataatgtcaaagtgctttcatataggctgtaag 8469442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 319
Target Start/End: Original strand, 49219063 - 49219231
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    ||||||||| |||| ||| | ||||  |||||| |||||| || |||||||||||||||  |  ||||| |||||||||||| ||| | |||||| ||||    
T  49219063 ttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaa-ctat 49219161  T
Q  250 cttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctc 319  Q
    |||  |||| |||||||||||  ||| |||||||||| ||  |||  ||||| ||||| |||||| ||||    
T  49219162 cttaaagagattatggaaataagctgaaaacaacttatggagatgctattaattgttttcataaggtctc 49219231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 4191661 - 4191732
Alignment:
Q  148 gtttatcatataagtgtttatgcataaactatttccataacataagat-aaaataaagtcaagctgctttca 218  Q
    |||||||||||||||| ||||| |||| ||||||| |||||| ||||| ||||||||||||| ||| |||||    
T  4191661 gtttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttca 4191732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 330
Target Start/End: Complemental strand, 7694115 - 7693978
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttagggg 290  Q
    ||||| |||| ||||||| ||| |||   |||||||||||||||| | ||||| | |||| ||||||| |||||||||||  ||| |||||||||| |      
T  7694115 aagatgaaatgaagtcaaactgtttttgtataagctataagctgttttcataa-gttatcctggagagtttatggaaataagctgaaaacaacttatgaa 7694017  T
Q  291 catgtcattaactgtttccataagatctcacaaataatct 330  Q
    ||||||||||||| ||| |||||| | ||||||| |||||    
T  7694016 catgtcattaactattt-cataagttttcacaaacaatct 7693978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 44319874 - 44319956
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 233  Q
    |||||||||||||| | ||| |||||||||||| |||| | |||||||||||||||| | ||| ||||| |||||||| |||||    
T  44319874 ttatcatataagtgctcatgtataaactatttctataaaa-aagataaaataaagtcgaactgttttcatataagctacaagct 44319956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 3662265 - 3662330
Alignment:
Q  142 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||| | |||| ||||| |||||||||| | |||||| ||||||||||||||||||    
T  3662265 ttaagtgtttatcatgttagtgcttatg-ataaactattcctataacaaaagataaaataaagtcaa 3662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 4071806 - 4071887
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||||||||  |  ||||| ||||||||||||    
T  4071806 tttaccatataagtgtttatatataa-ctatttctataacaaaagataaaataaagtcaaattattttcatataagctataag 4071887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 4471095 - 4471149
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaag 204  Q
    |||| ||||||||| |||||||||||||||||  |||||| ||||||||||||||    
T  4471095 ttattatataagtgcttatgcataaactatttttataacaaaagataaaataaag 4471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 30338723 - 30338653
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||| |||||||||||| |||||| |||||| |||||||| || ||| ||||| ||||||||||| ||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgt 30338653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 51044597 - 51044547
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||| |||| ||||||| |||||| ||||||||||||||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaa 51044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 270
Target Start/End: Original strand, 52735049 - 52735165
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||||||||   ||||| ||| |||||||  ||||| ||||||||||||||||||  | |||||| ||||| |||| | ||| | | | |||||||    
T  52735049 ttatcatataagt---tatgcgtaagctatttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgt-aagctat 52735144  T
Q  250 cttggagagcttatggaaata 270  Q
    |||| ||||||||||||||||    
T  52735145 cttgaagagcttatggaaata 52735165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 2996512 - 2996616
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatg 264  Q
    ||||| |||| ||| ||| |||||||||||||||||| ||||||  || ||| | ||||| |||||| ||| | ||| ||||||||||||||||| ||||    
T  2996512 ttatgaataagctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcat-aagctatcttggagagcgtatg 2996610  T
Q  265 gaaata 270  Q
     |||||    
T  2996611 aaaata 2996616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 42641772 - 42641727
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataa 202  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||    
T  42641772 ataagtgtttatgtataagctatttccataacaaaagataaaataa 42641727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 46796935 - 46797000
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||| |||||||||||||  |||||||||| |||||| ||||||| | ||||||||||| ||||    
T  46796935 taagtgcttatcatataagttcttatgcataagctattttcataacaaacgataaaataaattcaa 46797000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 21593149 - 21593078
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    |||||| ||||| |||||||||||| |||||  |||||||||||||||||| ||  ||||| |||||||||||    
T  21593149 taagtgcttatgtataaactatttctataactaaagataaaataaagtcaa-ctattttcatataagctataa 21593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 30207716 - 30207598
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||||||||| ||||| |||   || ||| |||||| || |||||||||| |||| ||| ||||| |||||||||||| ||| | ||| ||||||     
T  30207716 ttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcat-aagctac 30207619  T
Q  250 cttggagagcttatggaaata 270  Q
    ||| ||||| |||||||||||    
T  30207618 cttagagagattatggaaata 30207598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 41088311 - 41088363
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    ||||||||||| ||||| ||||||||||| || |||| |||||||||||||||    
T  41088311 tcatataagtgcttatgtataaactattttcacaacaaaagataaaataaagt 41088363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 10192227 - 10192317
Alignment:
Q  169 gcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagct 260  Q
    |||||||||||||  |||||| |||||| |||||||||||  || ||||| ||||| |||||| ||| | || ||||||||| |||||||||    
T  10192227 gcataaactatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttca-aaagctatcctggagagct 10192317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 21683617 - 21683570
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    |||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  21683617 taagtgtttatgtataaactatttctataacaaaagataagataaagt 21683570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 21952506 - 21952557
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||||||| ||||||| |||||| ||| |||||| |||||||    
T  21952506 ataagtgtttatgcataagctatttctataacaaaaggtaaaatcaagtcaa 21952557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 35958593 - 35958691
Alignment:
Q  164 tttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttat 263  Q
    |||||| |||| ||||||| |||||||||| ||||||||||||||  |  ||| | |||||||| ||||||| | ||| |||||||| ||||||| ||||    
T  35958593 tttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcat-aagctatcctggagagtttat 35958691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 36734816 - 36734875
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||| ||||| |||| || |||| |||||| ||| ||||||||||||||    
T  36734816 tttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaa 36734875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 41050620 - 41050675
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    |||||||||||||||| ||| |||||||||||| |||||| ||||| |||| ||||    
T  41050620 ttatcatataagtgttaatgtataaactatttctataacaaaagatgaaatgaagt 41050675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 41606109 - 41606168
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||| ||||||||||| | |||||||||  |||||| | ||||||||||||||||    
T  41606109 tttatcatacaagtgtttatgtaaaaactattttgataacaaaggataaaataaagtcaa 41606168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 47970245 - 47970300
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||| ||||| |||| ||||||| |||||| |||||||||| |||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaa 47970300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 55870453 - 55870406
Alignment:
Q  184 ataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||| ||||| |||||||||||| ||| ||||||||||||||||||    
T  55870453 ataacaaaagatcaaataaagtcaaactgttttcacataagctataag 55870406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 2980624 - 2980578
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataaca 189  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||||||    
T  2980624 taagtgtttatcatataagtgcttatgtataagctatttctataaca 2980578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 285
Target Start/End: Complemental strand, 18628668 - 18628555
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    ||||| ||||||  ||||| |||  |||||| |||||| ||| ||| | ||||| ||||| |||| | ||||| | ||||||||||||||||||||||||    
T  18628668 ataaattatttctttaacaaaaggaaaaatatagtcaaactgtttttatataagttataaactgttttcataa-gttatcttggagagcttatggaaata 18628570  T
Q  271 gcctggaaacaactt 285  Q
      ||| |||||||||    
T  18628569 agctgaaaacaactt 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 32920543 - 32920488
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||||||| |||| ||||||  |||||  ||||||||||||||||||    
T  32920543 tatcatataagtgtttatggataagctatttttataac--aagataaaataaagtcaa 32920488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 46013439 - 46013365
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||||||||  |||||||||||   |||| |||||||||||||||||| ||| ||| | ||||| ||||||    
T  46013439 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 46013365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 51556014 - 51555956
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtca 207  Q
    ||||||||||||||| ||||| |||| |||||   |||||| |||||||||||||||||    
T  51556014 tttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 54277460 - 54277402
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||| |||||| ||| || |||||||| ||| |||||| ||||||||||||||||||    
T  54277460 ttatcagataagtatttgtgtataaactacttctataacaaaagataaaataaagtcaa 54277402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 3891501 - 3891555
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    |||||||||||||| ||||| |||||||||||| |||||  | ||||||||||||||    
T  3891501 ttatcatataagtgcttatgaataaactatttctataac--aggataaaataaagtc 3891555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 27405980 - 27406029
Alignment:
Q  155 atataagtgtttatgcataaactatttccataacataagataaaataaag 204  Q
    |||||||||||||| ||||||||||||| |||  | ||||||||||||||    
T  27405980 atataagtgtttattcataaactatttctatagtaaaagataaaataaag 27406029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 41603549 - 41603484
Alignment:
Q  138 taaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    |||| ||| ||||| ||||||||||| ||||| |||| ||||||  ||||||||||| ||||||||    
T  41603549 taaaataaatgtttgtcatataagtgcttatgtataagctatttatataacataagaaaaaataaa 41603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 43372116 - 43372035
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    |||| ||||||||||||||  |||||  |||||  |||||| ||||||||||| |||||| ||| ||| | |||||||||||    
T  43372116 tttaccatataagtgtttaaacataaggtatttttataacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 5131305 - 5131261
Alignment:
Q  242 aaagctatcttggagagcttatggaaatagcctggaaacaactta 286  Q
    ||||||||| |||||||||||||||||||  ||| ||||||||||    
T  5131305 aaagctatcctggagagcttatggaaataagctgaaaacaactta 5131261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 7749235 - 7749175
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    |||||||||| |||||||||||||||| |||  ||||||| |||| | |||| ||||||||    
T  7749235 taagtgtttaccatataagtgtttatgtatacgctatttctataataaaagagaaaataaa 7749175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 270
Target Start/End: Complemental strand, 8422982 - 8422866
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatc 250  Q
    ||||||||| ||| ||||| |||| ||||||  |||| | |||||||||||||||||   || ||||| |||||||||||| ||| | ||  || |||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtca--ttgttttcatataagctataagttgttttca-caatctatc 8422886  T
Q  251 ttggagagcttatggaaata 270  Q
    |||||||| ||||| |||||    
T  8422885 ttggagagtttatgcaaata 8422866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 11264226 - 11264278
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    ||||||||||||| ||||| ||||||||||||  ||| | |||||||||||||    
T  11264226 tatcatataagtgattatgtataaactatttcactaataaaagataaaataaa 11264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 19422332 - 19422400
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||| | ||||||||||| || ||||| ||||  |||||| |||||| |||||| |||||||||||    
T  19422332 aattaagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaa 19422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 28582055 - 28581937
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||| ||||||||||| |||||||||||   || || |||||||||||||||||| ||  ||||| ||| | ||| || ||| | || ||||||||    
T  28582055 ttatcatagaagtgtttatgtataaactattt-tttagcaaaagataaaataaagtcaaactattttcagatatgttatgagttgttttca-aaagctat 28581958  T
Q  250 cttggagagcttatggaaata 270  Q
    | | ||||||||| |||||||    
T  28581957 catagagagcttaaggaaata 28581937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 36048521 - 36048576
Alignment:
Q  214 tttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    ||||| |||||||||||||| | | || ||||||||||| |||||||||||||||||    
T  36048521 tttcatataagctataagctattttca-aaagctatcttagagagcttatggaaata 36048576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 39438656 - 39438624
Alignment:
Q  176 ctatttccataacataagataaaataaagtcaa 208  Q
    ||||||| |||||||||||||||||||||||||    
T  39438656 ctatttctataacataagataaaataaagtcaa 39438624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 53626729 - 53626785
Alignment:
Q  179 tttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||| |||||| ||||||||||||| ||||  || ||||| ||||||||||||||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgt 53626785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 33787877 - 33787761
Alignment:
Q  164 tttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttat 263  Q
    |||||| |||||||||||| |||||| || |||||| ||||||||  || ||||| ||||| |||||||||| | ||| ||| |||||||||||||||||    
T  33787877 tttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcat-aagttatcttggagagcttat 33787779  T
Q  264 ggaaatagcctggaaaca 281  Q
    |||||||| ||| |||||    
T  33787778 ggaaataggctgaaaaca 33787761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 281973 - 281859
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    |||| ||||| | |||||| ||||||||||||||||||  || ||||| |||||||||||||||| | ||| |||||||| | ||||||| |||||||||    
T  281973 ataagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcat-aagctatcctagagagctcatggaaata 281875  T
Q  271 gcctggaaacaactta 286  Q
      ||| ||||||||||    
T  281874 agctgaaaacaactta 281859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 2456884 - 2456943
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 218  Q
    |||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  2456884 taagtgcttatgtataaactatttcgataaca-aagataaaataaagtcaagctgctttca 2456943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 31672614 - 31672546
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 218  Q
    |||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||| ||| |||||    
T  31672614 ttatcatacaagtgtttatgtataaactatttccatgacaaaaaataaaataaagtcaaactgttttca 31672546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 7785847 - 7785733
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttagggg 290  Q
    |||||||||||||||||| ||  ||||| |||||||||||  ||||| |||   ||||| ||||||||||||||||||||  ||| ||||||||||  |     
T  7785847 aagataaaataaagtcaaactcttttcatataagctataaattgtcttcat---gctattttggagagcttatggaaataagctgaaaacaacttataga 7785751  T
Q  291 catgtcattaactgtttc 308  Q
    |||||||| | |||||||    
T  7785750 catgtcataagctgtttc 7785733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 21959651 - 21959732
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    ||||||||| ||||| ||| | |||| |||||||||||||| ||||||||||||||||||  || || || |||||||||||    
T  21959651 tttatcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctataa 21959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 3169391 - 3169312
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 229  Q
    |||||||||||||| |||||  ||| ||||||| |||||| ||||| ||||||| || | ||| ||||||||||||||||    
T  3169391 ttatcatataagtgcttatgtgtaacctatttctataacaaaagatgaaataaattcgaactgttttcacataagctata 3169312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 7713950 - 7714025
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagct 226  Q
    ||||||||||| | ||||| |||||||| || ||||||| ||||||||||||||||||  || ||||| |||||||    
T  7713950 tatcatataagagcttatgtataaactactttcataacaaaagataaaataaagtcaaattgttttcatataagct 7714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 8349810 - 8349755
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||||||||||||||    
T  8349810 ttatcatataagtgtttgtgtataaactatttctctaacaaaagataaaataaagt 8349755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 8010271 - 8010348
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 218  Q
    |||||||||||||||||||||||| ||| | |||| ||||||| |||||| |  ||||||||||||||| || ||||||    
T  8010271 aattaagtgtttatcatataagtgcttaggtataagctatttctataaca-acaataaaataaagtcaatctactttca 8010348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 282
Target Start/End: Complemental strand, 24836340 - 24836217
Alignment:
Q  155 atataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttgg 254  Q
    |||||||| |||||| ||||  |||||| |||||| ||||||||||||||||||  || ||||  |||| ||||||| | ||      |||||||| |||    
T  24836340 atataagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagttttc----gtaagctatcatgg 24836245  T
Q  255 agagcttatggaaatagcctggaaacaa 282  Q
    ||||||||||||||||  ||||||||||    
T  24836244 agagcttatggaaataagctggaaacaa 24836217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 29269820 - 29269878
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||| || || || |||||||||||| |||||| ||||||||||||||||||    
T  29269820 ttatcatataaatgcttgtgtataaactatttctataacagaagataaaataaagtcaa 29269878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 10452505 - 10452412
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaa 244  Q
    |||||||| |||| ||||| |||| ||||||| |||||| || |||||||||| |||| ||  ||||| |||||||||||| ||| | ||||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgtttccataaa 10452412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 29274375 - 29274290
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||||| || || ||||| |||| ||||||| ||| || ||||||||||||||||||  || ||||| ||||||||||| ||||    
T  29274375 ttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgt 29274290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 34671224 - 34671139
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||| |||||||||||| | |||| ||||||| |||||| ||||| |||| |||||||||| | ||  ||||| |||||||||||    
T  34671224 ttatcgtataagtgtttacgaataagctatttctataacacaagattaaattaagtcaagcttcgtttgcataatctataagctgt 34671139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 1810445 - 1810393
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    ||||||||||||| ||||||| || ||||||| |||||| |||||||||||||    
T  1810445 tatcatataagtgcttatgcaaaagctatttctataacaaaagataaaataaa 1810393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 3204687 - 3204611
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagcta 227  Q
    ||||||||||||| ||| | |||||||| ||| |||| | |||||||||||||||| | ||| ||||| ||||||||    
T  3204687 tatcatataagtgcttacgaataaactacttctataataaaagataaaataaagtcgaactgttttcatataagcta 3204611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 13360659 - 13360719
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagc 210  Q
    |||||||||||||| |||||   |||||||||| |||||| || |||||||||||||||||    
T  13360659 ttatcatataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtcaagc 13360719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 4248885 - 4248940
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||| ||||  |||| ||||||| |||||| ||||||||||||||||||    
T  4248885 tcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaa 4248940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 10032495 - 10032582
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtct 237  Q
    ||||||||||| |||||||| |||| ||||||  ||||||  || | |||||||| ||| ||  ||||| ||||||||||||||||||    
T  10032495 ttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataagctgtct 10032582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 10400183 - 10400312
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagat-aaaataaagtcaagctgctttcacataagctataagctgtcta 238  Q
    ||||||| | ||||||||||| |||||||| |||| ||||||  |||| | ||||| |||||||||||||  || | ||| |||||||||||| |||||     
T  10400183 aattaagggcttatcatataaatgtttatgtataagctattt-tataataaaagataaaaataaagtcaaattgttatcatataagctataagatgtctt 10400281  T
Q  239 cataaagctatcttggagagcttatggaaata 270  Q
    ||| ||| |||| ||| ||||||||| |||||    
T  10400282 cat-aagatatcctggtgagcttatgaaaata 10400312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 30523855 - 30523918
Alignment:
Q  144 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtca 207  Q
    |||||||||||||||||||| || || | ||  |||||||| |||| |||||||||||||||||    
T  30523855 aagtgtttatcatataagtgcttttgtacaagttatttccacaacagaagataaaataaagtca 30523918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 32386712 - 32386590
Alignment:
Q  147 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagc 246  Q
    ||||||||||||||||| ||||| ||| ||||||||  ||| | |||||||||||| |||||  || ||||| ||||| |||| | ||| | |||  ||     
T  32386712 tgtttatcatataagtgcttatgtatagactatttcactaagaaaagataaaataaggtcaaattgttttcatataaggtatacgttgttttcat-tagt 32386614  T
Q  247 tatcttggagagcttatggaaata 270  Q
    |||| ||||||||||||| |||||    
T  32386613 tatcctggagagcttatgaaaata 32386590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 2514626 - 2514684
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||| |||||| ||||| |||| ||||||| |||| | ||||||||||||||||||    
T  2514626 ttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaa 2514684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 4006645 - 4006719
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    ||||||| ||||||||||  |||||| |||||| | ||||||||||||||||  || ||| | ||||||||||||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataag 4006719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 4247785 - 4247731
Alignment:
Q  145 agtgtttatcatataagtgtttatgcataaactatttccataacataagataaaa 199  Q
    |||||||||||| |||||| ||||| |||| ||||||| |||||| |||||||||    
T  4247785 agtgtttatcatgtaagtgcttatgtataagctatttctataacaaaagataaaa 4247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 5550059 - 5550141
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||||||||| ||||| ||| | |||||| |||| |  |||||| ||||||||||  || ||||| ||||||||||||||||    
T  5550059 tcatataagtgcttatgtatatagtatttcgataataagagataacataaagtcaaattgttttcatataagctataagctgt 5550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 24774682 - 24774740
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||| |||||| ||||  |||||||||||| |||||| || |||||||||||||||    
T  24774682 ttatcatgtaagtgcttatatataaactatttctataacaaaatataaaataaagtcaa 24774740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 32513741 - 32513806
Alignment:
Q  143 taagtgtttat-catataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||| ||||| |||||||||||||||  |||||| |||||| || |||||||||||||||    
T  32513741 taagtgtttattcatattagtgtttatgcataagttatttctataaca-aaaataaaataaagtcaa 32513806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 33911434 - 33911372
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    |||||| |||| ||||||||||||||| |||| ||||||  |||||| ||||| |||||||||    
T  33911434 taagtgattataatataagtgtttatgtataatctatttttataacaaaagatcaaataaagt 33911372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 1401080 - 1401148
Alignment:
Q  197 aaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatgga 266  Q
    ||||||| |||| |||||||   |||||||||||||||| | ||||| |||||| |||||||||||||||    
T  1401080 aaataaaatcaaactgctttagtataagctataagctgttttcataa-gctatcatggagagcttatgga 1401148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 1402946 - 1403038
Alignment:
Q  176 ctatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaat 269  Q
    ||||||| |||||| ||||||||||||||| || ||  ||||| |||||||||||  ||| | ||| |||||||| |||||| ||||| |||||    
T  1402946 ctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcat-aagctatcatggagatcttatagaaat 1403038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 10016463 - 10016575
Alignment:
Q  144 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataa 243  Q
    |||||||| ||||||||||  ||||| |||| ||||||| | | || ||||||||||||| | || ||| | ||| |||||| ||||||||| | ||| |    
T  10016463 aagtgtttctcatataagtccttatgtataagctatttctaaaccaaaagataaaataaatttaaactgttctcatataagccataagctgttttcat-a 10016561  T
Q  244 agctatcttggaga 257  Q
    |||||| |||||||    
T  10016562 agctatgttggaga 10016575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 10476175 - 10476099
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctca 320  Q
    |||||||||||||||||| || ||||||  ||| |||||| ||| | |||||||||||  |||||||||||| |||||    
T  10476175 aagctatcttggagagct-atagaaataagctgaaaacaatttacgagcatgtcattagatgtttccataagctctca 10476099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 27909683 - 27909623
Alignment:
Q  252 tggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccata 312  Q
    |||||||||||||||||||  ||| |||||||||| || ||||||||  | ||||||||||    
T  27909683 tggagagcttatggaaataagctgaaaacaacttatggacatgtcatatattgtttccata 27909623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 34939760 - 34939836
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctc 319  Q
    |||||||| ||||||| |||||||||||  ||| |||||| ||| || |||||||| | |||||||| |||| ||||    
T  34939760 aagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctc 34939836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 35095075 - 35095015
Alignment:
Q  148 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||||  ||||| |||||| ||||| |||||| || ||||||||| |||||    
T  35095075 gtttatcatataagtaattatgtataaaccatttctataacaaaatataaaataatgtcaa 35095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 323
Target Start/End: Original strand, 38462205 - 38462376
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||||||||||||||  |||| ||||||| ||| || |||||||||||||||||| ||| ||||| ||| ||||||| |||| | ||| |||||||    
T  38462205 ttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcat-aagctat 38462303  T
Q  250 cttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaa 323  Q
    |   || ||||||||||||||  ||| |||||||||| || || |||| ||| |||||  ||||| ||||||||    
T  38462304 ccaagatagcttatggaaataagctgaaaacaacttatggtcaagtca-taattgtttgtataagctctcacaa 38462376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 323
Target Start/End: Complemental strand, 24887408 - 24887258
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    |||| ||||||| ||||||  ||||||||||||||||| |||  |||| |||||||| ||||||| | ||| |||||||| |||||||||||||| ||||    
T  24887408 ataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcat-aagctatcctggagagcttatgggaata 24887310  T
Q  271 gcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaa 323  Q
      ||| |||| | |||  | |||||||| || |||||||||| ||||||||||    
T  24887309 agctgaaaac-agttaatgacatgtcataaattgtttccatacgatctcacaa 24887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 286
Target Start/End: Original strand, 27792789 - 27792931
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata 242  Q
    |||| |||||||||||||||| ||||| |||| ||||||| | |||| |||||||||||| ||||| ||  ||||| |||||||  ||| ||| | ||||    
T  27792789 taagagtttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcata 27792888  T
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaactta 286  Q
    || ||||| || ||||||||| ||||||  ||| ||||||||||    
T  27792889 aa-ctatcatgtagagcttatagaaataagctgaaaacaactta 27792931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 41028997 - 41028919
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 228  Q
    |||||||||||||| ||||| |||| ||||||| |||||| |||| ||||||||||||| ||| ||||| |||||||||    
T  41028997 ttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataagctat 41028919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 25183134 - 25183049
Alignment:
Q  151 tatcatataagtgttta-tgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||||||||||||||| || |||||||||||  |||||| ||||| ||||||||| |||||  ||||| || |||||||||||||    
T  25183134 tatcatataagtgtttaatgtataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctataagctgt 25183049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 36139809 - 36139921
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggag 256  Q
    ||||||| ||||| |||| |||||||  ||| |||||||||||||||||||| ||| ||||  |||||||||||| ||| | ||| |  |||||||| ||    
T  36139809 ataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataagttgt-ttcattatactatcttgaag 36139907  T
Q  257 agcttatggaaata 270  Q
    |||||||| |||||    
T  36139908 agcttatgaaaata 36139921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 312
Target Start/End: Original strand, 23785174 - 23785340
Alignment:
Q  147 tgtttatcatataagtgt--ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaa 244  Q
    |||||||||||||| | |  ||||||||||  |||||| | | || |||||||||||||||||| |||  |||| ||||||||||| |||| | ||  ||    
T  23785174 tgtttatcatataaatatgcttatgcataagttatttctacagcagaagataaaataaagtcaaactgtattcatataagctataaactgttttca-caa 23785272  T
Q  245 gctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccata 312  Q
    ||| || ||||||||||||||||| |  ||| |||||||||| || || | ||| | |||||||||||    
T  23785273 gctctcatggagagcttatggaaacaagctgaaaacaacttatggacacgccataagctgtttccata 23785340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 34958254 - 34958314
Alignment:
Q  152 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctg 212  Q
    ||||||||||   ||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  34958254 atcatataagcacttatgaataaactatttctataacacaagataaaataaagtcaagctg 34958314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 37273150 - 37273240
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcac 333  Q
    ||||||||||||||| ||||||||||||   || |||||||||| || |||||||| |  |||||||||||| |||| |||| | ||||||    
T  37273150 aagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcac 37273240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 20192744 - 20192667
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||| ||||| |||| ||||||  |||||| |||||||||||||||||| | | ||||| |||| |||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgt 20192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 24603802 - 24603725
Alignment:
Q  247 tatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaa 324  Q
    ||||||||||  |||||||||||| | || ||||| |||| ||||||||||| ||||||||| ||||| |||| ||||    
T  24603802 tatcttggaggacttatggaaatatcttgaaaacagcttatgggcatgtcataaactgtttcaataagttctcccaaa 24603725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 32703061 - 32703142
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    |||||||||||| |||||||| |||| ||||||| || | | ||||||||||||| ||||  || ||||| |||||||||||    
T  32703061 tttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 34954031 - 34954080
Alignment:
Q  174 aactatttccataacataagataaaataaagtcaagctgctttcacataa 223  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||| ||||    
T  34954031 aactatttctataacacaagataaaataaagtcaagctgttttcatataa 34954080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 36101492 - 36101573
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||| ||||||| ||||| |||| |||||||  ||| |||||||||||||||||||| ||| ||||  |||| |||||||    
T  36101492 ttatcaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataag 36101573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 49587041 - 49586984
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 228  Q
    |||| ||||||| |||||| |||||||||||||||||| ||| ||||| |||||||||    
T  49587041 ataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 52450204 - 52450123
Alignment:
Q  144 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagc 225  Q
    |||||||||||||| ||||  |||||||||| | ||||| |||||| ||||| |||||||||||| | | ||||| ||||||    
T  52450204 aagtgtttatcatacaagtacttatgcataagcaatttctataacaaaagatgaaataaagtcaaacagttttcaaataagc 52450123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 25185907 - 25185974
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||||||||||||| ||||| ||||  |||||  |||||| ||||| ||||||||||||    
T  25185907 aattaagtgtttatcatataagtgcttatgaataagatatttatataacaaaagat-aaataaagtcaa 25185974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 43116577 - 43116493
Alignment:
Q  147 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    ||||||||||| |||||||||||  ||| ||||||| |||||| |||||||||| || |||| |   ||||| ||||||||||||    
T  43116577 tgtttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataag 43116493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 33405290 - 33405200
Alignment:
Q  173 aaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatg 264  Q
    |||||||||| ||| || ||| ||||||||||| ||  || ||||| |||||||||||||||| | ||| ||||||||||| ||| ||||||    
T  33405290 aaactatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcat-aagctatcttgaagaacttatg 33405200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 33965603 - 33965518
Alignment:
Q  184 ataacataagataaaataaagtcaagctgctttcacataa--gctataagctgtctacataaagctatcttggagagcttatggaaa 268  Q
    |||||| ||| |||||||||||||| ||| ||||| ||||  |||||||| ||| | ||||| ||||||||| ||||||||||||||    
T  33965603 ataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataa-gctatcttgaagagcttatggaaa 33965518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 37825147 - 37825210
Alignment:
Q  252 tggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaact-gtttccataag 314  Q
    ||||||||||||||||||| |||| |||||||||| || |||||||| | || |||||||||||    
T  37825147 tggagagcttatggaaataacctgaaaacaacttatggacatgtcataagctcgtttccataag 37825210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 40122900 - 40122818
Alignment:
Q  148 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    ||||||| ||| |||  ||||| |||| ||||||| |||||| |||||||||||||||||| ||| ||||| | ||||||||||    
T  40122900 gtttatcgtatcagtacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataag 40122818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 28283733 - 28283675
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaa 198  Q
    ||||||| |||||||||||||||| ||||||||||  || ||| |||||| ||||||||    
T  28283733 aattaagcgtttatcatataagtgcttatgcataagttacttctataacaaaagataaa 28283675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 32663560 - 32663614
Alignment:
Q  144 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaa 198  Q
    |||||||||||||| || |||||||||||||  |||||| |||||| ||||||||    
T  32663560 aagtgtttatcatacaattgtttatgcataagttatttctataacaaaagataaa 32663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 44374790 - 44374732
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||| ||||| |||| |||| ||  ||||| ||||||||||||||||||    
T  44374790 ttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaa 44374732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 53457301 - 53457359
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||| |||||||||| | |||| ||| ||| |||||| ||||||||||||||||||    
T  53457301 ttatcatttaagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaa 53457359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 905115 - 905058
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||| | ||| | |||| ||||||| |||||| ||||||||||||||||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaa 905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 2201093 - 2201169
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaa 268  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||||| | |||  |||||||||||| || ||| |||||    
T  2201093 aagataaaacaaagtcaaactgttttcatataagctataagctgttttcat-tagctatcttggatagtttaaggaaa 2201169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 24268308 - 24268243
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||| |||||||||| ||||| ||||| |||||||||||| ||| || ||| |||||| |||||||    
T  24268308 taagcgtttatcatacaagtgcttatgtataaactatttctatagcaaaagttaaaatcaagtcaa 24268243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 314
Target Start/End: Complemental strand, 27291045 - 27290884
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||||||||| ||| | ||||  |||||| ||||||  |||||||||||| || | ||  ||||| |||| ||| ||||||| | ||| | |||||    
T  27291045 ttatcatataagtgcttaggtataaggtatttctataaca--agataaaataaattcgaacttttttcatataatctaaaagctgtttgcatta-gctat 27290949  T
Q  250 cttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataag 314  Q
    | || |||| | |||||||||  ||| ||||| |||| ||||||||||| | |||||| ||||||    
T  27290948 cctgcagagttcatggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataag 27290884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 47584397 - 47584513
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagcta 248  Q
    |||||||||||||  ||||||  ||| ||||||| || ||| ||| |||||||||||||| | | ||| |  |||||||||| || ||  ||| |||| |    
T  47584397 tttatcatataaggttttatgtgtaagctatttctatgacaaaaggtaaaataaagtcaaaccgttttaatgtaagctataaactttcctcat-aagcaa 47584495  T
Q  249 tcttggagagcttatgga 266  Q
    ||||||||||||||||||    
T  47584496 tcttggagagcttatgga 47584513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 2128390 - 2128342
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    ||||| ||||||| |||| ||||||| |||||| |||||||||||||||    
T  2128390 ataagcgtttatgtataagctatttctataacaaaagataaaataaagt 2128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 12923430 - 12923390
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||||||||||||| ||||||||  ||||||||||||    
T  12923430 aagataaaataaagtcaaactgctttcttataagctataag 12923390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 16790241 - 16790181
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    |||| |||||||||||||||| ||||  ||||  |||||| |||||| |||||||||||||    
T  16790241 taagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 20349630 - 20349566
Alignment:
Q  142 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    ||||||| ||||||||||||||||| || |||| |||||||  ||||| | |||||||| |||||    
T  20349630 ttaagtgcttatcatataagtgtttgtgtataagctatttcagtaacaaaggataaaatgaagtc 20349566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 36783474 - 36783375
Alignment:
Q  157 ataagtgtttatgcataaa-ctatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttgga 255  Q
    ||||||||||||| ||||| ||||||| ||| || ||||||||||||||| ||  || ||||| |||| |||| |||||| | ||| ||||||| |||||    
T  36783474 ataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcat-aagctatattgga 36783376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 324
Target Start/End: Original strand, 27500 - 27673
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    ||||||| |||||| ||||| ||||  |||||| |||||| ||||||||||||||||||  || ||||| |||| ||||||| ||| | |||||| ||||    
T  27500 ttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaa-ctat 27598  T
Q  250 cttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaa 324  Q
    |||||  ||| | ||||||||  ||| ||||||||||  | |||||||| | || |||||||||| |||| ||||    
T  27599 cttggtaagcgtgtggaaataagctgaaaacaacttatagccatgtcataagctatttccataagctctcccaaa 27673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 28769492 - 28769303
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata 242  Q
    |||||| ||||||||||| || ||||| |||| ||||| | |||||| |  ||||||| ||||||| ||  ||||  |||||||||||||||| | |||     
T  28769492 taagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcat- 28769394  T
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcac 333  Q
    ||||||| |||||||| |||||||||||  ||| |||||||||| || ||| ||||   || ||| || ||| |||| |||||||||||||    
T  28769393 aagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcatatgctatttacacaagctctctcaaataatctcac 28769303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 14482121 - 14482184
Alignment:
Q  145 agtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||| |||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||    
T  14482121 agtgcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaa 14482184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 4558720 - 4558841
Alignment:
Q  148 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagct 247  Q
    |||||| || |||||||||||| |||| ||||||| |||| | ||||||||||||||| ||  |  ||||| ||| |||||||||||| | ||| |||||    
T  4558720 gtttattatgtaagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccat-aagct 4558818  T
Q  248 atcttggagagcttatggaaata 270  Q
    ||| | |||||||||||||||||    
T  4558819 atcctagagagcttatggaaata 4558841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 4763849 - 4763927
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||||||||||||||||  |||||| | |||| ||||||||||||| |||| | | ||||||||||||||||||||||    
T  4763849 ataagtgtttatgcataagttatttcgacaacaaaagataaaataaattcaaaccgttttcacataagctataagctgt 4763927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 39392814 - 39392749
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||| ||||||||||||||  |||| |||||||||||| |||||| ||||||||||||||||||    
T  39392814 taagtgcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaa 39392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 39551359 - 39551243
Alignment:
Q  146 gtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaag 245  Q
    |||||||||||||||||||||||| |||| ||| |||||||| | ||||||||||||||  || |||  |||| | |||||||||| ||| | ||| |||    
T  39551359 gtgtttatcatataagtgtttatgtataacctacttccataataaaagataaaataaagctaaactgtcttcatacaagctataagttgttttcat-aag 39551261  T
Q  246 ctatcttggagagcttat 263  Q
    || || ||||||||||||    
T  39551260 ctttcctggagagcttat 39551243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 10727114 - 10727202
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||| |||||||||||| |||||||||| ||||||| ||| || ||||| ||||||| ||||  || ||||||||||| ||||||    
T  10727114 taagtgttcatcatataagtgcttatgcataagctatttctatagcaaaagatgaaataaattcaaagtgttttcacataagttataag 10727202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 40728564 - 40728506
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||||| ||||||||  |||||| |||||| ||||||||||||||||||    
T  40728564 ttatcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaa 40728506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 5226525 - 5226582
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    ||||||||||||||||||||| |||||| ||||| |||||| |||||||||| |||||    
T  5226525 tttatcatataagtgtttatgtataaacaatttcaataacaaaagataaaatcaagtc 5226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 787255 - 787167
Alignment:
Q  147 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||||||| |||||| |||||  ||| || ||||| ||||||||||||||||||||||||  || | ||| ||||||||||| ||||    
T  787255 tgtttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataaactgt 787167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 29973013 - 29973124
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggaga 257  Q
    |||||| ||||  |||| |||||||  ||||| ||| |||||||||||||| ||  |||||||||||||||||| ||| | ||| |||||||| | ||||    
T  29973013 taagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcat-aagctatccttgaga 29973111  T
Q  258 gcttatggaaata 270  Q
    | |||||||||||    
T  29973112 gtttatggaaata 29973124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 34770817 - 34770897
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||| |||||| ||||| | ||||||||||||| ||| ||||||||||||||||||  || |||||  |||||||||||    
T  34770817 tatcatgtaagtgcttatgtaaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataag 34770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 12972779 - 12972861
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    ||||||||||||||| ||||| |||| ||||||| |||||| ||||| ||||||| | || ||| |||||  |||||||||||    
T  12972779 tttatcatataagtgcttatgtataagctatttcaataacagaagatgaaataaaattaaactggtttcatgtaagctataag 12972861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 1470981 - 1470917
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||| ||||||| |||| | ||||||||||||||||||  | |||||| ||||||||||||||||    
T  1470981 ataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgt 1470917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 6918333 - 6918245
Alignment:
Q  142 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    ||||||| |||| |||||||||||| |  |||| ||||||  |||| | |||||||||||||||||| ||| ||||  |||||||||||    
T  6918333 ttaagtgcttataatataagtgtttgtatataagctatttatataataaaagataaaataaagtcaaactgttttctaataagctataa 6918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 7026654 - 7026738
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 233  Q
    ||||||||||||||| |||||||||| ||| |   |||||| ||||||||||||||| ||  || ||||| ||||| ||||||||    
T  7026654 tttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataaggtataagct 7026738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 11000686 - 11000626
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||| |||||||||||||| ||||||||||||||||||  || ||||  ||||||||||||    
T  11000686 ataagctatttccataacaaaagataaaataaagtcaaattgttttcgaataagctataag 11000626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 6509408 - 6509330
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    ||||||||||||||||||  ||  || | |||||||||||||||| | ||||| |||||| |||||||||||| ||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataa-gctatcctggagagcttattgaaata 6509330  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 269
Target Start/End: Complemental strand, 9837014 - 9836882
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaa-------ctatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||| |||||||||||||||||||||| |||||       ||||||  ||||||   |||||| ||||||||| ||  ||||| ||||| || || ||||    
T  9837014 taagagtttatcatataagtgtttatgtataaaacataagctatttttataacaactgataaagtaaagtcaaactattttcatataagttacaacctgt 9836915  T
Q  236 ctacataaagctatcttggagagcttatggaaat 269  Q
     | ||||| |||||||||||||||||||||||||    
T  9836914 tttcataa-gctatcttggagagcttatggaaat 9836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 326
Target Start/End: Original strand, 30259134 - 30259213
Alignment:
Q  247 tatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaata 326  Q
    ||||||||||| ||||||||||||  ||| ||||||||||  | ||| |||| | ||||||||||||| |||| ||||||    
T  30259134 tatcttggagaacttatggaaataaactgaaaacaacttatagacatatcataagctgtttccataagctctctcaaata 30259213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 33553256 - 33553311
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcat 298  Q
    ||||||||||| ||||||||||||||||  |||| |||| ||||||| ||||||||    
T  33553256 aagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcat 33553311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 35298625 - 35298570
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaag 204  Q
    ||||||||||||||| ||||| |||| |||||||  ||||| ||||||||||||||    
T  35298625 tttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaag 35298570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 25872559 - 25872469
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 233  Q
    |||||||||||| |||||||| ||| | |||| |||||| ||| ||| ||||| | ||||||| || ||| ||||| ||||| ||||||||    
T  25872559 taagtgtttatcgtataagtgcttacgtataagctattttcattacaaaagatgatataaagtaaaactgttttcatataagttataagct 25872469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 1112786 - 1112859
Alignment:
Q  159 aagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagc 232  Q
    ||||| ||||| |||  ||||||| |||||| |||||||||||| || ||  || |||||||||||||||||||    
T  1112786 aagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataagc 1112859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 2364626 - 2364561
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||||||| | |||||| |||  ||||||  ||| || ||||||||||||||||||    
T  2364626 taagtgtttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaagtcaa 2364561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 3645969 - 3645884
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 228  Q
    ||||||||||||||||||||| || || |||| ||||||| |||| | || |||||| ||| |||| ||  ||||| |||||||||    
T  3645969 taagtgtttatcatataagtgcttgtgtataagctatttctataagaaaatataaaacaaaatcaaactattttcatataagctat 3645884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 8062232 - 8062297
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||| |||||||||| ||||||||||| ||| ||  |||| |||||| | ||||||||||||||||    
T  8062232 taagcgtttatcatagaagtgtttatgtatacaccctttctataacaaatgataaaataaagtcaa 8062297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 8062323 - 8062415
Alignment:
Q  220 ataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataa 313  Q
    |||||||||||||||| | ||||| |||||||| ||||| |||||||||||  ||| ||||| |||| || || ||  | ||||||||||||||    
T  8062323 ataagctataagctgttttcataa-gctatcttagagagattatggaaataagctgaaaacatcttatggacacgttgtaaactgtttccataa 8062415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 11056813 - 11056732
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||||||||||| |||||| | ||||||| |||||| |||  ||||||||||  | ||  ||||| ||||||||||||    
T  11056813 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataag 11056732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 30988138 - 30988053
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||||||||||| ||| || ||||  |||||| ||||||  | |||||||||| |||| ||||||| | ||||| ||||||||||    
T  30988138 ttatcatataagtttttttgtataatttatttcaataacaagatataaaataaaatcaaactgcttttaaataagttataagctgt 30988053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 39866878 - 39866761
Alignment:
Q  155 atataagtgtttatgcataaactatttccataacataagataaaataaagtcaag-ctgctttcacataagctataagctgtctacata-aagctatctt 252  Q
    |||||| || ||||||| || |||| || |||||| ||||||||||||||||||  ||| ||||| | || ||||||  ||| | |||| ||||||||||    
T  39866878 atataaatgcttatgcacaagctatctctataacaaaagataaaataaagtcaaaactgttttcataaaaactataaattgttttcatataagctatctt 39866779  T
Q  253 ggagagcttatggaaata 270  Q
    | |||||||||| |||||    
T  39866778 gaagagcttatgaaaata 39866761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 12361157 - 12361284
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttagggg 290  Q
    |||||||||| |||||||  || ||||| |||||||||||||||| | ||| ||| |||   |||||||| |||||||||   || ||||| |||| ||     
T  12361157 aagataaaatgaagtcaaattgttttcatataagctataagctgttttcat-aagttattcaggagagctaatggaaataagttgaaaacagcttatgga 12361255  T
Q  291 catgtcattaactgtttccataagatctc 319  Q
    |||||||| | || |||| ||||||||||    
T  12361256 catgtcataagctatttctataagatctc 12361284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 33209367 - 33209283
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 233  Q
    ||||||||| |||||| |||  |||| ||||||| ||||   |||||||||||||||| | ||| ||||| |||| |||||||||    
T  33209367 tttatcatacaagtgtctataaataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataagct 33209283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 19177396 - 19177484
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||| |||||||||||||| ||||| |||||||||||| | |||| |||||||||| ||||| | ||| ||||| ||||||||||||    
T  19177396 taagtgattatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataag 19177484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 32172577 - 32172776
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 249  Q
    |||||||| ||| | ||||| |||||||||||| | |||| |||||||||| |||||||| || || || |||||||||||||||| | ||| |||||||    
T  32172577 ttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcat-aagctat 32172675  T
Q  250 cttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcactattgtttatggtagt 349  Q
    | || ||| || |||||||||  ||| |||   |||| || |||||||| |  |||||||||||| |||| ||||  ||||||| | || ||||| ||||    
T  32172676 catgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctcccaaactatctcacaagtgcttatgctagt 32172775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 35135815 - 35135727
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||| ||| |||||||||||||||| ||||  |||||| |||||| |||||||||||||||||| ||  ||||| ||||||||||||    
T  35135815 taagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataag 35135727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 35960338 - 35960396
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaataaagtcaa 35960396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 14295456 - 14295540
Alignment:
Q  176 ctatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagctt 261  Q
    ||||||| |||||| |||||||||||||||||| ||| ||||| |||||||||||||||| | | | |||||||| ||||||||||    
T  14295456 ctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgt-aagctatcctggagagctt 14295540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 324
Target Start/End: Complemental strand, 28586911 - 28586739
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatc 250  Q
    ||||||||| ||| ||||| ||| |||||||| |||||| |||||||||||||||||| ||| ||||| ||||  |||||||||| |  |   |||||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttga-cgagctatc 28586813  T
Q  251 ttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaa 324  Q
     | |||||||||| ||||||  ||| ||||| |||| ||  ||||||| | || |||||||||| |||| ||||    
T  28586812 ctagagagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcccaaa 28586739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 985584 - 985635
Alignment:
Q  177 tatttccataacataagataaaataaagtcaagctgctttcacataagctat 228  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  985584 tatttccataacaaaagataaaataaagtcaaactgttttcacataagctat 985635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 912802 - 912677
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc-aagctgctttcacataagctataagctgtctacat 241  Q
    |||||| |||||||||||| ||||||| ||||  |||||| |||||| || ||||||||||||| ||  || ||||| |||||| ||||| ||| |  ||    
T  912802 taagtgcttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttgtttttat 912703  T
Q  242 aaagctatcttggagagcttatggaaa 268  Q
    ||| |||||||||| ||||||||||||    
T  912702 aaa-ctatcttggaaagcttatggaaa 912677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 6734045 - 6733983
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    |||||| ||||||||||||||||||||||||| ||||||  |||||  |||||||||||||||    
T  6734045 taagtgattatcatataagtgtttatgcataatctatttttataacgaaagataaaataaagt 6733983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 12975294 - 12975387
Alignment:
Q  173 aaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaa 267  Q
    |||||||| | |||||| |  |||||||||| ||||  || ||||| |||||||||||||||| | ||||| |||||||||||||||||||||||    
T  12975294 aaactattcctataacaaagaataaaataaaatcaaattgttttcatataagctataagctgtgttcataa-gctatcttggagagcttatggaa 12975387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 16889674 - 16889794
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatg 264  Q
    ||||| |||| |||||||||||||| |||||||| | ||||||| ||| ||| | | |||||||||||||| | ||| |||||||  | ||||| |||||    
T  16889674 ttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcat-aagctatgctagagagtttatg 16889772  T
Q  265 gaaatagcctggaaacaactta 286  Q
    ||||||  ||| ||||||||||    
T  16889773 gaaataatctgaaaacaactta 16889794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 20982288 - 20982223
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||| |||||||||||||| ||||| |||| ||||||| |||||| | ||||||||||||||||    
T  20982288 taagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 32059734 - 32059650
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||||||||||| ||||| |||| || |||   |||| ||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  32059734 ttatcatataagtgcttatgtataagctgtttttgtaac-taagataaaataaagtcaaactgttttcatataagctataagctgt 32059650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 36646166 - 36646231
Alignment:
Q  152 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttc 217  Q
    ||||||||| || |||||||||||||||||  ||||||||||||||| ||||||||| ||| ||||    
T  36646166 atcatataaatgcttatgcataaactatttttataacataagataaactaaagtcaaactgttttc 36646231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 11667102 - 11667166
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 229  Q
    |||||||||||||||||| |||||| | ||||||||||||||||| || ||||| || |||||||    
T  11667102 ttatgcataaactatttcaataacaaaggataaaataaagtcaagttgttttcatatgagctata 11667166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 35095939 - 35095871
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||| | |||||||||||||| ||||   ||||||||||| |||||| ||||||||||||||||||    
T  35095939 aattaagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaa 35095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 286
Target Start/End: Complemental strand, 9202901 - 9202759
Alignment:
Q  144 aagtgtttatcat-ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata 242  Q
    ||||||||||||| ||||||| ||||  |||| |||||||  || || ||||||||||||||| ||  || ||||| |||||| ||||||||| | |||     
T  9202901 aagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcat- 9202803  T
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaactta 286  Q
    ||| ||||||| ||| |||||| |||||  ||||||||| ||||    
T  9202802 aagttatcttgaagaacttatgaaaataagctggaaacagctta 9202759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 37063217 - 37063162
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||| || ||||| |||||||||||| |||||| ||||||||||||||||||    
T  37063217 tcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaa 37063162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 12242764 - 12242674
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcac 333  Q
    ||||||||||||||||||||||||| ||  ||| |||||||| | |  |||||||| |  | |||||||||| |||| |||||||||||||    
T  12242764 aagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaataatctcac 12242674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 28578837 - 28578883
Alignment:
Q  171 ataaactatttccataacataagataaaataaagtcaagctgctttc 217  Q
    |||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  28578837 ataagctatttctataacataagataaaataaagtcaagctgttttc 28578883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 37611269 - 37611179
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcac 333  Q
    |||||||||||||||||||||||||||| |||| ||||| |||| |  |||||||  |  ||||| |||||| |||| |||| ||||||||    
T  37611269 aagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcac 37611179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 37787999 - 37787909
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcac 333  Q
    |||||||||||||||||||||||||||| |||| ||||| |||| |  |||||||  |  ||||| |||||| |||| |||| ||||||||    
T  37787999 aagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcac 37787909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 1019588 - 1019523
Alignment:
Q  152 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttc 217  Q
    ||||||||| || |||||||||||||||||  |||||| |||||||| ||||||||| ||| ||||    
T  1019588 atcatataaatgcttatgcataaactattttaataacaaaagataaactaaagtcaaactgttttc 1019523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 36539670 - 36539751
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||||||||| |||||  ||| ||||||   || || |||||||||||||||||| ||| ||||| ||||||||||||    
T  36539670 ttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataag 36539751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 7096271 - 7096215
Alignment:
Q  152 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||| ||||| ||||| |||| ||||||| |||||| ||||||||||||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 7096215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 11790900 - 11790936
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactat 179  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11790900 taagtgtttatcatataagtgcttatgcataaactat 11790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 18857538 - 18857439
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggaga 257  Q
    |||||||||||| |||| ||||||| |||||| | ||||||||||||||||  || |||   |||| ||||||||||| | ||| ||||| |||||||||    
T  18857538 taagtgtttatgaataagctatttcaataacacacgataaaataaagtcaaattgtttttctataatctataagctgttttcat-aagctgtcttggaga 18857440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 286
Target Start/End: Complemental strand, 32194228 - 32194090
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttc-cataacataagataaaataaagtcaagctgctttc--acataagctataagctgtctacataaagc 246  Q
    |||||||||||||| ||||||||| |||| |||  |||||| || |||||||||||||||| || ||||  | |||||||||||| ||| |   | ||||    
T  32194228 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgt-ttttttaagc 32194130  T
Q  247 tatcttggagagcttatggaaatagcctggaaacaactta 286  Q
    |||||| ||||||||||  |||||  ||| ||||||||||    
T  32194129 tatctttgagagcttatataaataagctgaaaacaactta 32194090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 583885 - 583838
Alignment:
Q  184 ataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||| |||||||||||||||||| ||| ||||| ||||||||||||    
T  583885 ataacagaagataaaataaagtcaaactgttttcatataagctataag 583838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 12425488 - 12425614
Alignment:
Q  144 aagtgtttatcat-ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata 242  Q
    ||||||||||||| ||||  | ||||| |||||||||||  |||  | ||||||||||||||| ||  || ||||  |||||||||||||||| | ||      
T  12425488 aagtgtttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttca-c 12425586  T
Q  243 aagctatcttggagagcttatggaaata 270  Q
    ||||||||||||||| |||||| |||||    
T  12425587 aagctatcttggagaacttatgaaaata 12425614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 19113270 - 19113211
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataa 202  Q
    |||||||||||||||||| || ||||| |||||||||||  |||||| || |||||||||    
T  19113270 taagtgtttatcatataattgcttatgtataaactatttttataacaaaaaataaaataa 19113211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 270
Target Start/End: Complemental strand, 36542434 - 36542309
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata 242  Q
    ||||| ||||||||||||||||||||| || | ||||||| |||||| | ||||  || || |||| ||| | ||| |||||||||||||||  | |||     
T  36542434 taagtatttatcatataagtgtttatgtat-agctatttctataacaaacgatattatcaaatcaaactgttctcatataagctataagctgattccat- 36542337  T
Q  243 aagctatcttggagagcttatggaaata 270  Q
    |||||||| | |||||||| ||||||||    
T  36542336 aagctatcctagagagcttgtggaaata 36542309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 3970812 - 3970707
Alignment:
Q  165 ttatgcataaactatttccataacataa-gataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttat 263  Q
    ||||| |||||||||||| |||||| || |||||||||||||||| ||||||||  |||| ||| |||||   | ||| |||||||  ||||||||||||    
T  3970812 ttatggataaactatttctataacacaaagataaaataaagtcaatctgctttcttataatctagaagctaatttcat-aagctatactggagagcttat 3970714  T
Q  264 ggaaata 270  Q
    | |||||    
T  3970713 gaaaata 3970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 8177584 - 8177518
Alignment:
Q  245 gctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccat 311  Q
    |||||| ||||||||||||| ||||| |||| |||||||||| || ||| |||| | ||||||||||    
T  8177584 gctatcctggagagcttatgaaaataacctgaaaacaacttatggacatatcataagctgtttccat 8177518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 11095611 - 11095557
Alignment:
Q  154 catataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||| ||||| |||||||||||| |||||| | |||| |||||||||||    
T  11095611 catataagtgattatgtataaactatttctataacaaatgatacaataaagtcaa 11095557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 8985583 - 8985628
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagata 196  Q
    ||||||||||||||||||||||| |||||||| |||| | ||||||    
T  8985583 tatcatataagtgtttatgcatacactatttctataataaaagata 8985628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 12407806 - 12407726
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    |||||||| ||||||| ||| |||| ||||||| |||||| ||||||||||||||| || ||| |||||  |||| ||||||    
T  12407806 ttatcatacaagtgtt-atgtataagctatttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataag 12407726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 13224353 - 13224406
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    |||||||| ||||| ||||| |||| ||||||| |||||| |||||||||||||    
T  13224353 ttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 26516222 - 26516275
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    |||||||||||||| ||||| |||| ||||||| | |||| |||||||||||||    
T  26516222 ttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 36638670 - 36638719
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaa 199  Q
    |||||||||| ||||| ||| |||||||||||| |||||| |||||||||    
T  36638670 ttatcatataggtgttaatgtataaactatttctataacaaaagataaaa 36638719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 37690756 - 37690663
Alignment:
Q  177 tatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    |||||| |||| | |||||||||| || ||||   | ||||| |||||||||||| ||| | ||||||| |||  |||||||||||||||||||    
T  37690756 tatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatggaaata 37690663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 10303747 - 10303783
Alignment:
Q  172 taaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  10303747 taaactatttctataacaaaagataaaataaagtcaa 10303783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 11835208 - 11835256
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    ||||||||||||| |||||| ||||  |||||| |||||||||||||||    
T  11835208 ataagtgtttatgtataaaccatttttataacaaaagataaaataaagt 11835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 29117086 - 29116998
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 228  Q
    ||||||| | ||||||||||  || ||||| |||   |||||| |||||| |||||||||||||||||| ||| ||||  |||||||||    
T  29117086 aattaagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 27481443 - 27481321
Alignment:
Q  147 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagc 246  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| | |||||||  ||||||| ||| || || |||||||||||| | | | ||| ||||    
T  27481443 tgtttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcat-aagc 27481345  T
Q  247 tatcttggagagcttatggaaata 270  Q
    |||| |||| ||||||||||||||    
T  27481344 tatcatggatagcttatggaaata 27481321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 286
Target Start/End: Original strand, 27548186 - 27548322
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagcta 248  Q
    |||||| |||||||| ||||  |||| |||||||| || || |||||||||||||||| |  || |||||  ||||||||||||||| | ||| ||||||    
T  27548186 tttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcat-aagcta 27548284  T
Q  249 tcttggagagcttatggaaatagcctggaaacaactta 286  Q
    ||||||| | |||||||| |||  ||||||| ||||||    
T  27548285 tcttggataacttatggagataagctggaaaaaactta 27548322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 35536031 - 35536114
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 233  Q
    |||||||||||  | ||||| |||| ||||||| |||||||||||||||||||||||||  || ||||| ||||| ||||||||    
T  35536031 ttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataagct 35536114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 3610883 - 3610723
Alignment:
Q  153 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatctt 252  Q
    ||||||||||| ||||| |||| ||||||| | |||| |||||||||| ||| ||| ||| |||   |||||||||||| ||| | | |||| ||||| |    
T  3610883 tcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaa-ctatcct 3610785  T
Q  253 ggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataag 314  Q
     |||||||||| ||||||  ||| |||   |||| || |||||||||| |||||||||||||    
T  3610784 agagagcttatagaaataagctgaaaaaggcttatggacatgtcattagctgtttccataag 3610723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 270
Target Start/End: Original strand, 22759109 - 22759229
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagcta 248  Q
    ||||||||||||| |||||||  ||| ||||||  |||||| ||||||||||||||  ||  || ||||| |||||||| ||||||  | ||| ||||||    
T  22759109 tttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcat-aagcta 22759207  T
Q  249 tcttggagagcttatggaaata 270  Q
    ||  ||||||||||||||||||    
T  22759208 tccaggagagcttatggaaata 22759229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 30496629 - 30496686
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||| ||||||||||||| |||||||||||| |||||| || |||||||||||||||    
T  30496629 tatcacataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaa 30496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 28165023 - 28165134
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggaga 257  Q
    |||||| ||||| ||||  | |||| |||||| |||||||||| |||||||  || ||| | ||||||||||| ||||||  || |||||||| ||||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttat-aagctatcatggaga 28165121  T
Q  258 gcttatggaaata 270  Q
    |||||||||||||    
T  28165122 gcttatggaaata 28165134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 333
Target Start/End: Original strand, 33894544 - 33894733
Alignment:
Q  147 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctg--tctaca--ta 242  Q
    |||| ||||| |||||| ||||| |||| ||||||| |||||| |||||||||| ||||||| ||| ||||| ||||||| || | ||  | ||||  |     
T  33894544 tgttcatcatgtaagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagctttatgttgtttttacaactt 33894642  T
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcac 333  Q
    |||||||| |||| || |||| ||||||  ||| |||||||||| || ||||||||   |||||| |||||| ||||||||| | ||||||    
T  33894643 aagctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcac 33894733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 333
Target Start/End: Complemental strand, 44151592 - 44151440
Alignment:
Q  184 ataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaac 283  Q
    |||||| |||||| |||||||| || ||| || || |||||||||||| ||| | |||||| |||||||| | ||||||||||||||  ||| ||||| |    
T  44151592 ataacaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaa-ctatcttgaaaagcttatggaaataagctgaaaacatc 44151494  T
Q  284 ttaggggcatgtcat----taactgtttccataagatctcacaaataatctcac 333  Q
    ||| || ||||||||     || ||||| |||||| |||| |||||||||||||    
T  44151493 ttatggacatgtcataaaaaaattgttttcataagctctctcaaataatctcac 44151440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 5373138 - 5373205
Alignment:
Q  139 aaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    |||||||||| ||||||| |||||| ||||| |||  ||||||| |||||| ||||||||||||||||    
T  5373138 aaattaagtgcttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 270
Target Start/End: Complemental strand, 30456594 - 30456477
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagcta 248  Q
    |||||||| |||||||||||| |    ||||||| | |||| ||||||||||||||||||  || ||||| ||||| ||||||  || | |||||| |||    
T  30456594 tttatcatttaagtgtttatgtag---ctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaa-cta 30456499  T
Q  249 tcttggagagcttatggaaata 270  Q
    |||||||||||||||| |||||    
T  30456498 tcttggagagcttatgaaaata 30456477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 30751432 - 30751499
Alignment:
Q  141 attaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||||||||||| || || |||||||||||   ||||| || |||||||||||||||    
T  30751432 attaagtgtttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaa 30751499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 46223212 - 46223162
Alignment:
Q  156 tataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    |||||||||||||| |||| |||||||||||||| |||||||| |||||||    
T  46223212 tataagtgtttatgtataagctatttccataacaaaagataaattaaagtc 46223162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 49060464 - 49060522
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||    
T  49060464 ttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaa 49060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 1431461 - 1431396
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||| |||||||||||||||||||| ||||  |||||||||||   || |||||||||||||||    
T  1431461 taagtgcttatcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaa 1431396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 7244625 - 7244694
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 218  Q
    ||||||||||||||| ||||| |||| ||||||| ||| || ||||||||| |||||||| ||| |||||    
T  7244625 tttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttca 7244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 12110299 - 12110403
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatg 264  Q
    ||||| |||| ||||||| || ||| ||||||||||||||||||  || |||   |||||||||||||||| | ||| ||||||||||| ||| ||||||    
T  12110299 ttatgaataacctatttctattacacaagataaaataaagtcaaattgttttggtataagctataagctgttttcat-aagctatcttgaagaacttatg 12110397  T
Q  265 gaaata 270  Q
     |||||    
T  12110398 aaaata 12110403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 31002693 - 31002770
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||| ||||| |||||||||||| |  ||| ||||||||||||||||||  |  ||||| ||||||||||||||||    
T  31002693 taagtgcttatgtataaactatttcaaccacaaaagataaaataaagtcaaaatattttcatataagctataagctgt 31002770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 45593872 - 45593791
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataag 224  Q
    |||| ||||||||||||| || ||||| |||| |||||||  ||||| || ||||||||||||||| ||| ||||| |||||    
T  45593872 taagagtttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataag 45593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 47004008 - 47004069
Alignment:
Q  147 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||||||||||   ||| ||||||| ||||||  |||||||||||||||||    
T  47004008 tgtttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaa 47004069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 1417201 - 1417269
Alignment:
Q  163 gtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 231  Q
    ||||||| |||||||||||  |||||| ||||||||||||||||||  || ||||| |||||| |||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataag 1417269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 7244696 - 7244764
Alignment:
Q  243 aagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccat 311  Q
    ||||||| |||||||||||||| |||||  ||| |||||||||| | ||||||||| || |||||||||    
T  7244696 aagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccat 7244764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 27626280 - 27626212
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||  ||||| |||||||| |||| ||||||| ||| || ||| ||||||||||||||    
T  27626280 aattaagtgtttatgctataattgtttatgtataagctatttctatatcaaaagctaaaataaagtcaa 27626212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 29363478 - 29363561
Alignment:
Q  186 aacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    |||| |||||||||||||||||| ||| ||||| || || ||||||||||   ||| ||| |||| |||||||||||||||||||    
T  29363478 aacagaagataaaataaagtcaaactgttttcatattagttataagctgttatcat-aagttatcctggagagcttatggaaata 29363561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 39551694 - 39551614
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    ||||||||||||| |||| | |||| ||||||| |||||| |||||| | |||||| || ||| ||||| |||||||||||    
T  39551694 ttatcatataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataa 39551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 320
Target Start/End: Original strand, 46081949 - 46082129
Alignment:
Q  142 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaag-ctgctttcacataagctataagctgtctaca 240  Q
    ||||| ||||||  |||||||| ||||  |||| ||||||| |||||  ||| ||||| ||||||||  ||| ||||| ||||| |||||| ||| | ||    
T  46081949 ttaagcgtttattgtataagtgattatatataagctatttctataacgaaagttaaaacaaagtcaaaactgttttcatataagttataagttgttttca 46082048  T
Q  241 taaa-gctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctca 320  Q
    || | |||||  ||||||||||||| |||||  ||| |||||||||| || |||||||| |  ||||| |||||| |||||    
T  46082049 tagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagctctca 46082129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 36370635 - 36370712
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaata 270  Q
    |||||||||||| || || ||| |||||||||||||||||| ||| | |||||| ||||| || ||||||||||||||||    
T  36370635 aagataaaataa-gttaaactgttttcacataagctataagttgtttccataaa-ctatcctgaagagcttatggaaata 36370712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 44910554 - 44910696
Alignment:
Q  176 ctatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatggaaatagcctg 275  Q
    ||||||| ||| || |||| ||||||||||||| ||  ||||||| |||||| ||| ||| | |||||| ||||| |||||||||| ||||||||  | |    
T  44910554 ctatttctatatcaaaagagaaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaa-ctatcatggagagcttgtggaaataagccg 44910652  T
Q  276 gaaacaacttaggggcatgtcattaactgtttccataagatctc 319  Q
     |||||||| | || || | ||||| ||||||| ||||| ||||    
T  44910653 aaaacaactaatggccacgccattagctgtttcaataagctctc 44910696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 1350382 - 1350269
Alignment:
Q  156 tataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttgga 255  Q
    |||||||| ||||| ||||  |||||| ||||||   || |||| |||||||| ||  |||||||||| ||||||||||| | |||||| ||||| || |    
T  1350382 tataagtgcttatgaataagttatttctataacaattgacaaaagaaagtcaaacttttttcacataatctataagctgttttcataaa-ctatcctgaa 1350284  T
Q  256 gagcttatggaaata 270  Q
    ||||||||| |||||    
T  1350283 gagcttatgaaaata 1350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 2223072 - 2223130
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||| |||||||||||||| |||| ||||||| |||||| ||||||||  ||||||||    
T  2223072 ttatcgtataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaa 2223130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 11721372 - 11721314
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||||| |  |||||||||||| |||||| ||| ||||| ||||||||    
T  11721372 ttatcatataagtgtttctttataaactatttctataacaaaagttaaaagaaagtcaa 11721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 15328535 - 15328585
Alignment:
Q  155 atataagtgtttatgcataaactatttccataacataagataaaataaagt 205  Q
    ||||||||| |||||||||| ||||||| |||| | |||||||||||||||    
T  15328535 atataagtgcttatgcataatctatttctataataaaagataaaataaagt 15328585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 25511551 - 25511609
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||||  || ||||| |||||| |||||| ||||| ||||||||||||    
T  25511551 ttatcatataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaa 25511609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 33346774 - 33346850
Alignment:
Q  193 gataaaataaagtcaagctgctttcacataagctataagctg-tctacataaagctatcttggagagcttatggaaata 270  Q
    ||||||||||||||||||||| | || | |||||||||| || ||| ||| ||||||||||||||||||||| ||||||    
T  33346774 gataaaataaagtcaagctgcatgcataaaagctataagttgatct-cat-aagctatcttggagagcttatagaaata 33346850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 33646035 - 33645939
Alignment:
Q  221 taagctataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctc 319  Q
    |||||||||| |||| | ||||| ||||||| |||||||||||||||||| |||  ||||||||||  | |||||||| |  |||||||||||| ||||    
T  33646035 taagctataaactgttttcataa-gctatct-ggagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctc 33645939  T

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Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 36598474 - 36598408
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaag 209  Q
    |||||||||||||||| |||||||||| |||| ||||||| || |||| || | ||| |||||||||    
T  36598474 taagtgtttatcatattagtgtttatgtataagctatttctatgacatgaggttaaagaaagtcaag 36598408  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 5272954 - 5272881
Alignment:
Q  162 tgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    |||||||| |||||||||||  |||||| |||||||||| ||||||   || ||||| |||||||| |||||||    
T  5272954 tgtttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataagctagaagctgt 5272881  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 29574757 - 29574688
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaag 209  Q
    ||||||| ||||||||||||| || ||||| |||| ||||||  || ||| ||||| |||||||||||||    
T  29574757 aattaagcgtttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataaagtcaag 29574688  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 30133980 - 30134057
Alignment:
Q  157 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctg 234  Q
    ||||||||||||| |||| ||||||  | |||| ||||||||||||||||||  || ||||  ||||||| |||||||    
T  30133980 ataagtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagctttaagctg 30134057  T

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Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 35809041 - 35808992
Alignment:
Q  159 aagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||| |||| ||||||| |||||| ||||||||||| ||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaa 35808992  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 47006972 - 47007025
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    |||||||||||||| ||||| ||||||| |||| |||||| ||||| |||||||    
T  47006972 ttatcatataagtgcttatgtataaactttttctataacaaaagatcaaataaa 47007025  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 2048146 - 2048094
Alignment:
Q  191 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataa 243  Q
    |||||||| ||||||||| ||| ||||| |||||||||||||| | |||||||    
T  2048146 aagataaattaaagtcaaactgatttcagataagctataagctttttacataa 2048094  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 5006639 - 5006575
Alignment:
Q  166 tatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 230  Q
    |||| |||| ||||| | |||||| |||||||||||||||||| ||| ||||| ||||| |||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataa 5006575  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 24973870 - 24973926
Alignment:
Q  152 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||| ||||| | || ||||||| |||||| ||||||||||||| ||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaa 24973926  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 27378965 - 27378839
Alignment:
Q  158 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggaga 257  Q
    |||||| ||||| |||| ||||||| || ||| ||| |||||||||||  | ||| ||||| |||| ||| || |||| | |||||| ||||| ||||||    
T  27378965 taagtgcttatgtataagctatttctattacaaaag-taaaataaagtagaactgttttcatataaactacaatctgttttcataaa-ctatcctggaga 27378868  T
Q  258 gcttatggaaatagcctggaaacaactta 286  Q
    ||||||| |||||  ||| ||||||||||    
T  27378867 gcttatgaaaataaactgaaaacaactta 27378839  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 27389300 - 27389344
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataa 187  Q
    |||||| |||||||||||||||||||| |||| ||||||| ||||    
T  27389300 taagtgcttatcatataagtgtttatgtataagctatttctataa 27389344  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 42281655 - 42281587
Alignment:
Q  140 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||||||||| |||||| ||| |||| ||||||| || ||| |  ||||||| |||||||    
T  42281655 aattaagtgtttatcatatgagtgttaatgtataagctatttctatgacaaacaataaaatgaagtcaa 42281587  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 46091505 - 46091573
Alignment:
Q  135 aattaaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 203  Q
    |||| ||| |||||||||||| || |||| |||||||||| ||||| | |||||  |||||||||||||    
T  46091505 aatttaatgaagtgtttatcacatgagtgcttatgcataagctattcctataacgaaagataaaataaa 46091573  T

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Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 1219 - 1162
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||| ||||| |||| ||||||| |||||| ||||||||||||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 1162  T

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Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 2756 - 2813
Alignment:
Q  151 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    ||||||||||||| ||||| |||| ||||||| |||||| ||||||||||||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 2813  T

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Target: scaffold0091 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 5942 - 5999
Alignment:
Q  149 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 206  Q
    ||||||||||||||||||||| |||||| ||||| |||||| |||||||||| |||||    
T  5942 tttatcatataagtgtttatgtataaacaatttcaataacaaaagataaaatcaagtc 5999  T

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Target: scaffold0147 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 323
Target Start/End: Complemental strand, 12775 - 12678
Alignment:
Q  226 tataagctgtctacataaagctatcttggagagcttatggaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaa 323  Q
    |||||||||| | ||  |||||||||| |||||||||||||  ||  ||| |||||||||| || |||||||| |  |||||||||||| ||||||||    
T  12775 tataagctgttttcaagaagctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgtttccataaggtctcacaa 12678  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 353
Target Start/End: Complemental strand, 160103 - 159917
Alignment:
Q  165 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttggagagcttatg 264  Q
    |||||||||||||||| | ||| || |||||||||||||||||| |||   ||| ||||| |||||| ||| | ||| |||||||| |  ||||||| ||    
T  160103 ttatgcataaactattcctatagcaaaagataaaataaagtcaaactg-aatcatataagttataagatgttttcat-aagctatcctaaagagcttgtg 160006  T
Q  265 gaaatagcctggaaacaacttaggggcatgtcattaactgtttccataagatctcacaaataatctcactattgtttatggtagtagat 353  Q
    ||||||  ||| ||||  ||||  | |||||||| |||||||||||| || ||||  ||||| | |||| | |||||||  ||||||||    
T  160005 gaaataagctgaaaactgcttatagacatgtcataaactgtttccattagttctccaaaatagtttcacaagtgtttatattagtagat 159917  T

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Target: scaffold0654 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 6783 - 6725
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||| ||||| |||||||||||| |||||| || ||||| | |||||||    
T  6783 ttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 6725  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 143207 - 143141
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgcttt 216  Q
    |||||||||||| | ||||| || | ||||||| |||||| |||||||||||| ||||| |||||||    
T  143207 ttatcatataagcgcttatgaattagctatttctataacacaagataaaataatgtcaaactgcttt 143141  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 116702 - 116644
Alignment:
Q  150 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 208  Q
    |||||||||||||| ||||| |||||||||||| |||||| || ||||| | |||||||    
T  116702 ttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 116644  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 4377 - 4284
Alignment:
Q  143 taagtgtttatcatataagtgtttatgcataaactatttccataacata-agataaaataaagtcaagctgctttcacataagctataagctgt 235  Q
    ||||||||| ||||||| ||| ||||  |||| ||||||| |||| | | ||||||||||||||||| | | ||||| |||| |||||||||||    
T  4377 taagtgtttctcatatatgtgcttatatataatctatttctataaaaaagagataaaataaagtcaaaccgttttcatataaactataagctgt 4284  T

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