View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3218_low_43 (Length: 211)
Name: NF3218_low_43
Description: NF3218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3218_low_43 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 32190396 - 32190581
Alignment:
| Q |
10 |
catcatcatgtaggagaggtgaggatcgttagtttgtgtaagaatttcgtcggtctcaattttgagctcatcttcctcatcatttagtgagagatgctat |
109 |
Q |
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| T |
32190396 |
catcatcatgtaggagaggtgaggatcgttagtttgtgcaagaatttcgtcggtctcaattttgagctcatcttcctcatcatttagtgagagatgctat |
32190495 |
T |
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| Q |
110 |
attgttggtttcaagagaagtactcacagggagagaacactaggaacttctcacagggagagaatgcaacactaccatgacttttt |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32190496 |
attgttggtttcaagagaagtactcacagggagagaacactaggaacttctcacagggagagaatgcaacactaccatgacttttt |
32190581 |
T |
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