View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3219_high_18 (Length: 372)

Name: NF3219_high_18
Description: NF3219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3219_high_18
NF3219_high_18
[»] chr2 (28 HSPs)
chr2 (138-359)||(45368099-45368320)
chr2 (138-359)||(11992581-11992801)
chr2 (138-359)||(2610115-2610335)
chr2 (138-359)||(41763516-41763744)
chr2 (138-359)||(4807179-4807399)
chr2 (138-359)||(38453095-38453314)
chr2 (138-359)||(452097-452311)
chr2 (137-355)||(24584080-24584297)
chr2 (138-359)||(8180367-8180587)
chr2 (138-359)||(30743210-30743430)
chr2 (138-357)||(3865661-3865879)
chr2 (138-309)||(3244126-3244293)
chr2 (16-142)||(45369014-45369140)
chr2 (152-304)||(13148953-13149106)
chr2 (176-307)||(37281746-37281878)
chr2 (151-304)||(17581112-17581262)
chr2 (142-224)||(41197707-41197792)
chr2 (142-244)||(6238232-6238334)
chr2 (272-358)||(12475031-12475115)
chr2 (151-291)||(14769943-14770090)
chr2 (151-297)||(33594757-33594904)
chr2 (151-288)||(12904624-12904762)
chr2 (244-298)||(876778-876833)
chr2 (242-359)||(13592930-13593043)
chr2 (198-298)||(7135220-7135321)
chr2 (169-307)||(28317383-28317517)
chr2 (151-295)||(6465370-6465515)
chr2 (151-259)||(7292673-7292782)
[»] chr3 (25 HSPs)
chr3 (138-359)||(25190966-25191186)
chr3 (138-359)||(51448184-51448404)
chr3 (138-359)||(47542186-47542406)
chr3 (142-354)||(38849686-38849897)
chr3 (138-288)||(28245093-28245244)
chr3 (142-345)||(27917173-27917375)
chr3 (161-355)||(29817096-29817288)
chr3 (226-359)||(52138415-52138547)
chr3 (193-359)||(19757655-19757820)
chr3 (138-268)||(54425381-54425511)
chr3 (193-359)||(19736753-19736914)
chr3 (167-297)||(26489964-26490095)
chr3 (165-307)||(48221421-48221564)
chr3 (138-300)||(30345175-30345334)
chr3 (235-359)||(9258470-9258589)
chr3 (137-192)||(52138553-52138608)
chr3 (174-297)||(30724311-30724435)
chr3 (138-178)||(53519353-53519393)
chr3 (229-298)||(46145799-46145869)
chr3 (172-294)||(44395080-44395200)
chr3 (138-214)||(3186500-3186576)
chr3 (138-174)||(5168599-5168635)
chr3 (188-294)||(32490249-32490356)
chr3 (249-298)||(1470683-1470733)
chr3 (165-294)||(15750888-15751018)
[»] chr5 (28 HSPs)
chr5 (138-359)||(3301436-3301656)
chr5 (138-359)||(3394298-3394517)
chr5 (138-359)||(1274852-1275072)
chr5 (141-359)||(20318578-20318795)
chr5 (138-359)||(12492862-12493082)
chr5 (138-359)||(10638884-10639104)
chr5 (138-359)||(28977332-28977552)
chr5 (138-359)||(1288064-1288284)
chr5 (138-359)||(24178111-24178331)
chr5 (139-346)||(16347879-16348084)
chr5 (138-359)||(2075949-2076169)
chr5 (164-355)||(27302451-27302638)
chr5 (137-300)||(36200426-36200590)
chr5 (167-298)||(43558318-43558450)
chr5 (210-307)||(17341748-17341846)
chr5 (168-246)||(43423578-43423656)
chr5 (138-199)||(34272768-34272829)
chr5 (151-258)||(20077305-20077413)
chr5 (272-358)||(27518-27602)
chr5 (151-291)||(38578992-38579130)
chr5 (244-358)||(23979820-23979930)
chr5 (216-298)||(6368478-6368561)
chr5 (212-298)||(21915532-21915619)
chr5 (237-307)||(37124207-37124278)
chr5 (159-221)||(28676253-28676314)
chr5 (226-298)||(3096828-3096901)
chr5 (237-297)||(25937719-25937780)
chr5 (138-217)||(27622-27701)
[»] chr6 (17 HSPs)
chr6 (138-359)||(9706363-9706583)
chr6 (138-359)||(5631404-5631625)
chr6 (138-359)||(5258625-5258845)
chr6 (138-359)||(10100332-10100552)
chr6 (138-359)||(20428111-20428331)
chr6 (138-359)||(33495794-33496004)
chr6 (138-287)||(2689313-2689463)
chr6 (151-359)||(27790743-27790950)
chr6 (138-279)||(26291444-26291586)
chr6 (140-199)||(607905-607964)
chr6 (237-307)||(3632653-3632724)
chr6 (138-193)||(14030558-14030613)
chr6 (138-201)||(30679218-30679281)
chr6 (276-365)||(30670469-30670556)
chr6 (137-222)||(6056244-6056329)
chr6 (169-266)||(6641916-6642013)
chr6 (16-56)||(895927-895967)
[»] chr4 (40 HSPs)
chr4 (138-359)||(27450648-27450868)
chr4 (138-359)||(23906776-23906996)
chr4 (138-359)||(435816-436036)
chr4 (138-359)||(48174568-48174788)
chr4 (138-359)||(56374877-56375097)
chr4 (138-359)||(1777490-1777710)
chr4 (138-359)||(48623002-48623222)
chr4 (138-346)||(33226809-33227016)
chr4 (138-359)||(31960289-31960509)
chr4 (138-359)||(53707381-53707601)
chr4 (138-346)||(47265680-47265886)
chr4 (138-359)||(39708044-39708265)
chr4 (138-343)||(16002532-16002735)
chr4 (138-290)||(50286625-50286778)
chr4 (16-107)||(17476063-17476154)
chr4 (137-289)||(1211864-1212017)
chr4 (138-235)||(46583299-46583396)
chr4 (138-220)||(43433643-43433725)
chr4 (151-307)||(17666526-17666680)
chr4 (159-295)||(54787741-54787878)
chr4 (219-298)||(10775975-10776055)
chr4 (168-291)||(1629084-1629208)
chr4 (151-305)||(17667817-17667969)
chr4 (212-298)||(30807244-30807331)
chr4 (170-297)||(7092719-7092847)
chr4 (160-272)||(52280695-52280807)
chr4 (172-298)||(39754880-39755007)
chr4 (165-232)||(41009855-41009922)
chr4 (137-256)||(54914663-54914781)
chr4 (202-295)||(42037510-42037604)
chr4 (159-224)||(45185477-45185542)
chr4 (165-296)||(20917630-20917762)
chr4 (138-269)||(3273098-3273229)
chr4 (138-208)||(35690042-35690111)
chr4 (165-257)||(55578722-55578814)
chr4 (210-359)||(41427426-41427574)
chr4 (249-307)||(55768963-55769022)
chr4 (249-307)||(55833219-55833278)
chr4 (230-307)||(30853053-30853131)
chr4 (151-269)||(8917815-8917938)
[»] chr1 (36 HSPs)
chr1 (138-359)||(8671507-8671727)
chr1 (138-359)||(32083220-32083440)
chr1 (138-358)||(51601646-51601865)
chr1 (138-359)||(49347868-49348089)
chr1 (138-359)||(1210332-1210552)
chr1 (138-359)||(43240856-43241076)
chr1 (138-359)||(51441240-51441459)
chr1 (138-305)||(27445537-27445705)
chr1 (138-346)||(34827577-34827784)
chr1 (153-355)||(37463355-37463553)
chr1 (138-290)||(19936175-19936329)
chr1 (138-264)||(30202605-30202731)
chr1 (16-142)||(30784470-30784596)
chr1 (153-307)||(32066761-32066913)
chr1 (138-292)||(51234267-51234421)
chr1 (156-297)||(7921574-7921716)
chr1 (151-298)||(28528227-28528375)
chr1 (164-307)||(35828894-35829038)
chr1 (137-213)||(22089826-22089902)
chr1 (173-298)||(6640772-6640898)
chr1 (161-294)||(52739965-52740098)
chr1 (138-216)||(9592463-9592541)
chr1 (164-307)||(12807587-12807732)
chr1 (138-190)||(8391525-8391577)
chr1 (163-360)||(52421016-52421210)
chr1 (138-235)||(46226757-46226853)
chr1 (245-297)||(40419328-40419381)
chr1 (238-306)||(46226887-46226956)
chr1 (173-298)||(3877495-3877621)
chr1 (213-300)||(16142399-16142487)
chr1 (167-270)||(11331568-11331666)
chr1 (167-270)||(11489589-11489687)
chr1 (242-304)||(52641033-52641093)
chr1 (158-235)||(52640920-52640997)
chr1 (138-258)||(21275588-21275708)
chr1 (246-304)||(16273415-16273471)
[»] chr7 (30 HSPs)
chr7 (138-359)||(38606593-38606812)
chr7 (138-359)||(46356326-46356546)
chr7 (138-359)||(36651581-36651801)
chr7 (138-359)||(37616503-37616723)
chr7 (138-359)||(33350281-33350501)
chr7 (142-353)||(11593552-11593763)
chr7 (138-359)||(31004811-31005030)
chr7 (138-359)||(48918975-48919195)
chr7 (138-359)||(32630194-32630402)
chr7 (138-359)||(39906850-39907074)
chr7 (138-359)||(36869764-36869984)
chr7 (137-359)||(49028854-49029089)
chr7 (182-355)||(24177714-24177886)
chr7 (138-258)||(35906676-35906796)
chr7 (138-232)||(43281389-43281483)
chr7 (152-298)||(24550178-24550320)
chr7 (138-233)||(33072666-33072761)
chr7 (164-297)||(21517826-21517959)
chr7 (138-195)||(34869170-34869227)
chr7 (215-298)||(43793592-43793676)
chr7 (138-205)||(7272780-7272846)
chr7 (151-291)||(18637233-18637371)
chr7 (151-291)||(18650668-18650806)
chr7 (164-255)||(23087603-23087694)
chr7 (169-291)||(18608199-18608319)
chr7 (212-283)||(5843105-5843177)
chr7 (212-291)||(18626559-18626639)
chr7 (139-210)||(33139006-33139077)
chr7 (138-208)||(7189707-7189777)
chr7 (138-182)||(23404181-23404225)
[»] chr8 (34 HSPs)
chr8 (138-359)||(42854479-42854708)
chr8 (138-359)||(36565716-36565936)
chr8 (138-359)||(12492317-12492537)
chr8 (138-355)||(4032969-4033185)
chr8 (138-359)||(36544739-36544959)
chr8 (138-359)||(15215746-15215965)
chr8 (138-359)||(8879909-8880129)
chr8 (137-307)||(13984672-13984842)
chr8 (138-297)||(18124825-18124983)
chr8 (151-304)||(28300596-28300747)
chr8 (138-232)||(25299950-25300044)
chr8 (138-232)||(25439249-25439343)
chr8 (159-295)||(19293776-19293913)
chr8 (138-292)||(30113671-30113827)
chr8 (169-307)||(41444809-41444949)
chr8 (163-307)||(29735454-29735592)
chr8 (141-220)||(37077490-37077569)
chr8 (143-257)||(35601686-35601799)
chr8 (151-307)||(33830721-33830875)
chr8 (151-298)||(38667205-38667351)
chr8 (151-359)||(25985129-25985334)
chr8 (160-346)||(18849624-18849797)
chr8 (138-232)||(25288613-25288709)
chr8 (138-300)||(13589084-13589247)
chr8 (138-199)||(39946603-39946664)
chr8 (138-305)||(6510891-6511059)
chr8 (215-292)||(45332039-45332117)
chr8 (164-242)||(6986525-6986603)
chr8 (137-184)||(10824562-10824609)
chr8 (160-257)||(35601501-35601598)
chr8 (249-297)||(43732230-43732279)
chr8 (153-194)||(43732355-43732396)
chr8 (164-217)||(13172147-13172200)
chr8 (270-298)||(3285135-3285163)
[»] scaffold0570 (1 HSPs)
scaffold0570 (138-345)||(2745-2951)
[»] scaffold0113 (1 HSPs)
scaffold0113 (138-359)||(12073-12293)
[»] scaffold0018 (1 HSPs)
scaffold0018 (138-359)||(31055-31275)
[»] scaffold0024 (1 HSPs)
scaffold0024 (138-309)||(82356-82528)
[»] scaffold0171 (1 HSPs)
scaffold0171 (226-302)||(5834-5911)
[»] scaffold1493 (1 HSPs)
scaffold1493 (138-232)||(60-156)
[»] scaffold0045 (2 HSPs)
scaffold0045 (138-258)||(87084-87204)
scaffold0045 (254-359)||(88514-88618)
[»] scaffold0606 (1 HSPs)
scaffold0606 (168-298)||(9303-9434)


Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 45368099 - 45368320
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45368099 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 45368198  T
Q  238 atggacccaagatatttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacat 337  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45368199 atggacccaagatatttaaaccgtgtaatttgggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacat 45368298  T
Q  338 tccatataccccgtcttgcttc 359  Q
    ||||||||||||||||||||||    
T  45368299 tccatataccccgtcttgcttc 45368320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 11992581 - 11992801
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  11992581 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccatcattttgtact 11992680  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||| ||||  ||||||||||    
T  11992681 atagacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctctaaggtagacc--cacttctctttttactgaagttaca 11992778  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    ||||||||||  |||||||||||    
T  11992779 ttccatatacttcgtcttgcttc 11992801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 2610335 - 2610115
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||  ||||||||||      
T  2610335 tttcttatcgcataaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatggtttacatctgcttctatttctctgtcattttgtacg 2610236  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||| || ||||||||||    
T  2610235 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttctgctgaagttaca 2610138  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    || ||||||| ||||||||||||    
T  2610137 tttcatatactccgtcttgcttc 2610115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 41763516 - 41763744
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttc--------aaccacccagcttgaatacgataatttacatctgcttctatttctccatcat 229  Q
    ||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||  |||    
T  41763516 tttcttatcgcacaaaacacctgaggctcttctccatttcaagttttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccgacat 41763615  T
Q  230 tttgtattatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttg 328  Q
    |||||| ||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| ||    
T  41763616 tttgtactatggacccaagatatttaaatcgtgcaacttggggtatgatataatctccaactttcacctccaaggtagacc--cacttctccttttgctg 41763713  T
Q  329 aagttacattccatataccccgtcttgcttc 359  Q
    |||||||||||||||||| ||||||||||||    
T  41763714 aagttacattccatatactccgtcttgcttc 41763744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 4807399 - 4807179
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||| ||||||||||      
T  4807399 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccatcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 4807300  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |  |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||    ||||||||||    
T  4807299 aaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccactgaagttaca 4807202  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  4807201 ttccatatactccgtcttgcttc 4807179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 38453095 - 38453314
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||   |||||| ||||||||||||||| |||||||||||     
T  38453095 tttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccagcttgaatatgatggcttacatatgcttctatttctccgtcattttgtatg 38453194  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    ||||||||||  | ||| ||||||    
T  38453195 aaggacccaagatatttaaatcgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagac---tacttctccttccgctgatgttaca 38453291  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  38453292 ttccatatactccgtcttgcttc 38453314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 452097 - 452311
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  452097 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 452196  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||      ||||||||||||||||   ||||||||||  | ||||||||||    
T  452197 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctcca------acctccaaggtagacc--tacttctccttccgctgaagttaca 452288  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  452289 ttccatatactccgtcttgcttc 452311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 137 - 355
Target Start/End: Original strand, 24584080 - 24584297
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtat 236  Q
    ||||||| |||||||||||||  ||| || ||||||||||| ||||||||||||||||| |||   ||| |||||| | ||||||||||||||||||||     
T  24584080 ttttcttttcgcacaaaacacacgaggctattctccatttccaccacccagcttgaatatgatggcttaaatctgcctatatttctccatcattttgtac 24584179  T
Q  237 tatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttac 335  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  || | ||||||||||| |||||||||    
T  24584180 tatggacccaagatatttaaaccgtgtaacttgcggtctgatatgatctccaactttcacctccaaggtaga--cataattctccttttgctgaagttac 24584277  T
Q  336 attccatataccccgtcttg 355  Q
    ||||||||||| ||||||||    
T  24584278 attccatatactccgtcttg 24584297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 8180587 - 8180367
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||| ||      
T  8180587 tttcttatcgcacaaaactcttgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttataag 8180488  T
Q  238 atggacccaagatatttaaaccgtgtaacttgg-gtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||    |||| |||||    
T  8180487 aaggacccaaaatatttaaaccgtgtaacttggagtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccactgaaattaca 8180390  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| | ||||||||||    
T  8180389 ttccatatactctgtcttgcttc 8180367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 30743430 - 30743210
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| |||||||||| |||| |||||||| ||||||| ||| ||||||||||||||| ||||| |||| ||||||||| ||| |||||||||| |    
T  30743430 tttcttatcacacaaaacacatgaggctcttctcaatttcaatcactcagcttgaatacgatgatttatatctacttctatttatccgtcattttgtact 30743331  T
Q  238 atggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    || |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||   | ||||||||||| ||||||||||    
T  30743330 attgacctaagatatttaaaccgtgtaacttgggatatggtatgatctccaactttcacctccaaggtagacc--aatttctccttttgctgaagttaca 30743233  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| | ||||| ||||    
T  30743232 ttccatatactctgtctttcttc 30743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 138 - 357
Target Start/End: Complemental strand, 3865879 - 3865661
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||| ||||||||||      
T  3865879 tttcttatcacacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatagcttacatttgcttctatttctccgtcattttgtacg 3865780  T
Q  238 atggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||| |||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||  |  ||||||||||  | ||||||||||    
T  3865779 aaggacccaagttattgaaaccgtgtaacttgggatacaatatgatctccaactttcacctccaaggtaga--cgtacttctccttccgctgaagttaca 3865682  T
Q  337 ttccatataccccgtcttgct 357  Q
    || ||||||| ||||||||||    
T  3865681 tttcatatactccgtcttgct 3865661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 138 - 309
Target Start/End: Original strand, 3244126 - 3244293
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  3244126 tttcttatcgcacaaaacacctgaggctcatctccatttctaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 3244225  T
Q  238 atggacccaagatatttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggtagacc 309  Q
    | |||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||    
T  3244226 aaggacccaagatatttaaaccgtgtaacttgg----gatatgatcttcaactttcacctccaaggtagacc 3244293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 45369014 - 45369140
Alignment:
Q  16 aaaaatatgtgttcttttcgatttatatattattttatttcgacacaagcttaagacacggtggtagtagattgctacggtagccattttaatattgctt 115  Q
    |||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  45369014 aaaaatatgtgttcttttcagtttatatattattttattccaacacaagcttaagacacggtggtggtagattgctacggtagccattttaagattgctt 45369113  T
Q  116 tacaaaggcaaatatcaatacttttct 142  Q
    |||||||||||||||||||||||||||    
T  45369114 tacaaaggcaaatatcaatacttttct 45369140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 152 - 304
Target Start/End: Complemental strand, 13149106 - 13148953
Alignment:
Q  152 aaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagata 251  Q
    ||||||||||  ||||||| ||||||||||| ||| |||||||||||| ||||  |||| ||||||||||||| |||||||||| ||||||||  |||||    
T  13149106 aaacacctgaagctcttcttcatttcaaccatccaacttgaatacgatgatttgtatctacttctatttctccgtcattttgtactatggacctgagata 13149007  T
Q  252 tttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggt 304  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13149006 tttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggt 13148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 176 - 307
Target Start/End: Complemental strand, 37281878 - 37281746
Alignment:
Q  176 tcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt-gggtat 274  Q
    ||||||||||| |||||||| ||| |||||||||| ||||||||||||| ||||||| || |||||| | ||||||||||||  ||||||||| ||||||    
T  37281878 tcaaccacccaacttgaataggatgatttacatctacttctatttctccttcattttatactatggagctaagatatttaaaatgtgtaacttggggtat 37281779  T
Q  275 gatatgatctccaactttcacctccaaggtaga 307  Q
    || |||||||| |||||||||||||||||||||    
T  37281778 gacatgatctcaaactttcacctccaaggtaga 37281746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 17581262 - 17581112
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||| ||  |||||||||||||| |||||||   ||||||||||  ||| ||||||||     
T  17581262 aaaacacctgagactcttctccatttgaaccatccaacttgaatatgaggatttacatctgcttttatttctttgtcattttgtacaatgaacccaaga- 17581164  T
Q  251 atttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggt 304  Q
    |||||||| |||||||||  ||||||||||||||| ||||||||| || |||||    
T  17581163 atttaaactgtgtaactt--gtatgatatgatctctaactttcacttctaaggt 17581112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 41197707 - 41197792
Alignment:
Q  142 ttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatac---gataatttacatctgcttctatttctcc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||| ||| |||| |||||||||||||||    
T  41197707 ttatcgcacaaaacacctgagactcttctccatttcaaccacccaacttgaatacgatgatgattcacatatgcttctatttctcc 41197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 6238232 - 6238334
Alignment:
Q  142 ttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatgg 241  Q
    ||||| |||||||||| |||| ||||||||||||||||||| ||| |||||||||||| |||||||| || || |||||||||  ||||||||| |||||    
T  6238232 ttatcacacaaaacacatgaggctcttctccatttcaaccatccaacttgaatacgatgatttacatatgtttttatttctccgacattttgtactatgg 6238331  T
Q  242 acc 244  Q
    |||    
T  6238332 acc 6238334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 358
Target Start/End: Original strand, 12475031 - 12475115
Alignment:
Q  272 tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttgctt 358  Q
    ||||||||||||||||||||||||||| ||||||||||   ||||||||||  | |||||||||||||||||||| |||||||||||    
T  12475031 tatgatatgatctccaactttcacctctaaggtagacc--tacttctccttccgctgaagttacattccatatactccgtcttgctt 12475115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 151 - 291
Target Start/End: Complemental strand, 14770090 - 14769943
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccaccc-agcttgaatacgata-----atttacatctgcttctatttctccatcattttgtattatggacc 244  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||| ||||     |||||||| |||||  |||||||  |  ||||||| ||||| ||    
T  14770090 aaaacaccttacactcttctccatttcaaccaccccagcttgaatatgatataatgatttacatatgcttgaatttctctgttgttttgtactatggccc 14769991  T
Q  245 caagatatttaaaccgtgtaactt-gggtatgatatgatctccaactt 291  Q
     |||||||||||||||||||||||  | ||||||||||||||||||||    
T  14769990 taagatatttaaaccgtgtaacttatgctatgatatgatctccaactt 14769943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 151 - 297
Target Start/End: Original strand, 33594757 - 33594904
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||||| |||| || |||||| |||||||||||| ||||||  |||  ||||||||| |||||||||||||  | ||||||| |||  ||| |||||    
T  33594757 aaaacacctaagacactcctccatctcaaccacccagtttgaatttgatgttttacatctccttctatttctccgacgttttgtactatatacctaagat 33594856  T
Q  251 atttaaaccgtgtaact-tgggtatgatatgatctccaactttcacct 297  Q
    |||||||| |||||| |   |||||||||||| |||||||||||||||    
T  33594857 atttaaactgtgtaaatgctggtatgatatgaactccaactttcacct 33594904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 12904762 - 12904624
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    |||||||||||||| ||  |  |||||||||||| | ||||||| | ||  ||||||||| || | | |||||||| |||||||| ||| ||| | | ||    
T  12904762 aaaacacctgagacactcgtttatttcaaccacctaacttgaattctatggtttacatctcctccaacttctccattattttgtactatagacaccatat 12904663  T
Q  251 atttaaaccgtgtaacttg-ggtatgatatgatctccaa 288  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  12904662 atttaaaccgtgtaacttgtgatatgatatgatctccaa 12904624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 876833 - 876778
Alignment:
Q  244 ccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    |||| |||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  876833 ccaacatatttaaactgtgtaacttgtggtaggatatgatctccaactttcacctc 876778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 359
Target Start/End: Original strand, 13592930 - 13593043
Alignment:
Q  242 acccaagatatttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattcca 341  Q
    ||||||||||| ||||| |||||||||   ||||||||||||| ||||||||||||| ||| | || |   |||||  ||||||||||||||||||| ||    
T  13592930 acccaagatatctaaactgtgtaacttc--tatgatatgatcttcaactttcacctctaagtttgaac--tacttcgtcttttgttgaagttacattaca 13593025  T
Q  342 tataccccgtcttgcttc 359  Q
     |||||  ||||||||||    
T  13593026 cataccatgtcttgcttc 13593043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 298
Target Start/End: Original strand, 7135220 - 7135321
Alignment:
Q  198 ataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacc 296  Q
    ||||||||| ||| |||||||||||  ||  ||||||| | |||||||||||  ||| ||| |||||||||| ||||||||||||| || || |||||||    
T  7135220 ataatttacttctacttctatttctttattgttttgtactgtggacccaagactttttaactgtgtaacttgtggtatgatatgatatctaaatttcacc 7135319  T
Q  297 tc 298  Q
    ||    
T  7135320 tc 7135321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 307
Target Start/End: Complemental strand, 28317517 - 28317383
Alignment:
Q  169 ctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt 268  Q
    |||| |||||||||| ||||||| || | ||  | ||||||| ||||| ||| |||||||||||||| ||  || |||| |||| ||||  ||||| |||    
T  28317517 ctccgtttcaaccactcagcttggattcaatggtatacatctacttctttttatccatcattttgtactacagatccaaaatatataaattgtgtacctt 28317418  T
Q  269 gggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |    ||||||||||||||||||||||||| ||| ||||    
T  28317417 g----tgatatgatctccaactttcacctctaagctaga 28317383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 6465515 - 6465370
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    |||||| || |||||||||||||| ||| |||||   |||||||  ||| |||| ||| |||||| |||||||  |||||||||| |||    |||| ||    
T  6465515 aaaacagctaagactcttctccatctcagccacctgacttgaatttgatgatttgcatatgcttcaatttctcagtcattttgtagtataatgccaaaat 6465416  T
Q  251 atttaaaccgtgtaacttg-ggtatgatatgatctccaactttcac 295  Q
    ||| |||  |||||||||| | | | ||||||||||||||||||||    
T  6465415 attaaaattgtgtaacttgtgttttaatatgatctccaactttcac 6465370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 7292782 - 7292673
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatgga-cccaaga 249  Q
    |||||||||||| | || || ||||||||||||||| |||| ||  |||  ||||||||| |||||||| | || ||| |||||| ||| || ||| |||    
T  7292782 aaaacacctgagtcactccttcatttcaaccacccaacttggatttgatggtttacatctccttctattcccccgtcagtttgtactatagaccccgaga 7292683  T
Q  250 tatttaaacc 259  Q
    ||||||||||    
T  7292682 tatttaaacc 7292673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 180; Significance: 4e-97; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 25191186 - 25190966
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |    
T  25191186 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgatgatttacatttgcttctatttctccatcattttgtact 25191087  T
Q  238 atggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  25191086 atagacccaagatatttaaaccgtgtaacttgggctatgatatgatctccaactttcacctccaaggtagacc--cacttctccttttgctgaagttaca 25190989  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  25190988 ttccatatactccgtcttgcttc 25190966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 51448184 - 51448404
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||      
T  51448184 tttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatagcttacatctgcttctatttctccgtcattttgtacg 51448283  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  51448284 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 51448381  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    || ||||||| ||||||||||||    
T  51448382 tttcatatactccgtcttgcttc 51448404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 47542186 - 47542406
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||||||      
T  47542186 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgtacg 47542285  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||   |||||||||| || ||||||||||    
T  47542286 aaggacccaagatatttaaaccgtgtaacttggggtatgaaatgatctccaactttcacctccaaggtagacc--tacttctccttctgctgaagttaca 47542383  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    ||||||| || ||||||||||||    
T  47542384 ttccatacactccgtcttgcttc 47542406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 142 - 354
Target Start/End: Complemental strand, 38849897 - 38849686
Alignment:
Q  142 ttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatgg 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| |||||||||| | |||    
T  38849897 ttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacaatggcttacatctgcttctatttctccgtcattttgtactgtgg 38849798  T
Q  242 acccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattcc 340  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||| || |||||||||||    
T  38849797 acccaagatatttaaaccgtgtaaattgaggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttttgatgtagttacattcc 38849700  T
Q  341 atataccccgtctt 354  Q
    |||||| |||||||    
T  38849699 atatactccgtctt 38849686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 138 - 288
Target Start/End: Complemental strand, 28245244 - 28245093
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||      
T  28245244 tttcttatcgcacaaaacaactgagactcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccatcattttgtacg 28245145  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaa 288  Q
    | ||| ||||||||||||| ||||||||||| |||||| |||||||||||||    
T  28245144 aaggatccaagatatttaagccgtgtaacttggggtattatatgatctccaa 28245093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 345
Target Start/End: Complemental strand, 27917375 - 27917173
Alignment:
Q  142 ttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatgg 241  Q
    ||||| || ||||||| |||| |||||||| |||||| | ||||| |||||||||||| ||||| || ||||| ||||||||| |||||||||| |||||    
T  27917375 ttatcacataaaacacatgaggctcttctctatttcagctacccaacttgaatacgatgatttatatatgcttatatttctccgtcattttgtactatgg 27917276  T
Q  242 acccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattcc 340  Q
    || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |   | ||||||||||  |||||||||| |||    
T  27917275 actcaagatatttaaaccgtgtaacttgggatatgatatgatctccaactttcaccttcaaggtagaac--tagttctccttttactgaagttacaatcc 27917178  T
Q  341 atata 345  Q
    |||||    
T  27917177 atata 27917173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 161 - 355
Target Start/End: Complemental strand, 29817288 - 29817096
Alignment:
Q  161 agactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccg 260  Q
    ||||| ||||| |||||||||||||| |||||||||||| ||||||||||||   ||||| ||| |||||||||| |||||  | ||||||||| |||||    
T  29817288 agactattctctatttcaaccacccaacttgaatacgatgatttacatctgccgttatttatccgtcattttgtactatgg-tcaaagatatttgaaccg 29817190  T
Q  261 tgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttg 355  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||| |   ||||| ||||||| |||||||||||||||||||| | ||||||    
T  29817189 tgtaacttatggtatgatatgatctccaactttcacctccaagatagaac--aacttcaccttttgatgaagttacattccatatactctgtcttg 29817096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 226 - 359
Target Start/End: Complemental strand, 52138547 - 52138415
Alignment:
Q  226 tcattttgtattatggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctcctttt 324  Q
    ||||||||||  | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||      
T  52138547 tcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttcc 52138450  T
Q  325 gttgaagttacattccatataccccgtcttgcttc 359  Q
    | |||||||||||||||||||| ||||||||||||    
T  52138449 gctgaagttacattccatatactccgtcttgcttc 52138415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 193 - 359
Target Start/End: Complemental strand, 19757820 - 19757655
Alignment:
Q  193 atacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactt 291  Q
    ||||||| |||||||||||||  ||||||||  | |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  19757820 atacgatgatttacatctgctcttatttctctgttattttgtactatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaactt 19757721  T
Q  292 tcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttgcttc 359  Q
    |||||||||||||||  |   ||||  ||||||| | |||||||||||||||||| | ||||||||||    
T  19757720 tcacctccaaggtaggac--tactttgccttttgctaaagttacattccatatactctgtcttgcttc 19757655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 138 - 268
Target Start/End: Original strand, 54425381 - 54425511
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| |||||||||| |||||||||| | |||||||||| || ||||| |||||||| |||||||| ||||||||||||||| ||||||| || |    
T  54425381 tttcttatcacacaaaacacatgagactctttttcatttcaaccgcctagcttaaatacgatgatttacatatgcttctatttctccgtcattttttact 54425480  T
Q  238 atggacccaagatatttaaaccgtgtaactt 268  Q
    ||||| |||||||||||||||||||||||||    
T  54425481 atggatccaagatatttaaaccgtgtaactt 54425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 193 - 359
Target Start/End: Complemental strand, 19736914 - 19736753
Alignment:
Q  193 atacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactt 291  Q
    ||||||| |||||||||||||  ||||||||  | |||||||| ||||||    ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19736914 atacgatgatttacatctgctcttatttctctgttattttgtactatgga----agatatttaaaccatgtaacttggggtatgatatgatctccaactt 19736819  T
Q  292 tcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttgcttc 359  Q
    |||||||||||||||  | || ||   ||||||| |||||||||||||||||||| | ||||||||||    
T  19736818 tcacctccaaggtaggactactct--gccttttgctgaagttacattccatatactctgtcttgcttc 19736753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 26490095 - 26489964
Alignment:
Q  167 ttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaac 266  Q
    |||| ||| |||||||| || ||| |||| ||| |||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||| | ||||||    
T  26490095 ttcttcatctcaaccactcaacttcaatatgatgatttacatctgcttctatttctccgtcattttatatcatggaaccaagatatttaaatcatgtaac 26489996  T
Q  267 ttgg-gtatgatatgatctccaactttcacct 297  Q
    |||| |||||||||||||||| ||||||||||    
T  26489995 ttggagtatgatatgatctcccactttcacct 26489964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 307
Target Start/End: Complemental strand, 48221564 - 48221421
Alignment:
Q  165 tcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgta 264  Q
    |||||| ||||||||||| |||| |||||| |||| |||||||| |||||||| |||||  |||||||||| |||| | ||||||||||||||  |||||    
T  48221564 tcttcttcatttcaaccatccagtttgaattcgatgatttacatatgcttctacttctctgtcattttgtactatgaatccaagatatttaaaatgtgta 48221465  T
Q  265 acttg-ggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    ||||| ||||||||||||||| ||||||||||||| ||| ||||    
T  48221464 acttgtggtatgatatgatcttcaactttcacctctaagataga 48221421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 138 - 300
Target Start/End: Complemental strand, 30345334 - 30345175
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || ||||| || || || ||||||||  || ||||||| |    
T  30345334 tttcttatcgcataaaacacctgagactcttctccatttcaaccacccaacttgaatactatgatttatatatgtttttatttctctttctttttgtact 30345235  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctcca 300  Q
    ||| |||    ||||||||||| |||| ||| ||||||||||||| || | |||||||||||||    
T  30345234 atgaacc----atatttaaaccttgtagcttggggtatgatatgagcttccactttcacctcca 30345175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 359
Target Start/End: Complemental strand, 9258589 - 9258470
Alignment:
Q  235 attatggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagtt 333  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| || ||  |||||||| |||    ||| ||  |||||||||||||||||||    
T  9258589 attatggacccaagatatttaaaccgtgtaacttgggatatgatatgatatctaatgttcacctctaag----acctac--ttctccttttgttgaagtt 9258496  T
Q  334 acattccatataccccgtcttgcttc 359  Q
    ||||||||||||| ||||||||||||    
T  9258495 acattccatatactccgtcttgcttc 9258470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 52138608 - 52138553
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttga 192  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52138608 ttttcttatcgcacaagacacctgagactcttctccatttcaaccacccagcttga 52138553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 174 - 297
Target Start/End: Original strand, 30724311 - 30724435
Alignment:
Q  174 tttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt-gggt 272  Q
    |||| |||||||| ||||||| ||||||||||||| |  |||||||||||  | |||||||| |||| | ||||||||| ||||| |||||||||   ||    
T  30724311 tttctaccacccaacttgaattcgataatttacatatcattctatttctcacttattttgtaatatgtatccaagatatctaaactgtgtaacttatagt 30724410  T
Q  273 atgatatgatctccaactttcacct 297  Q
    ||||||||||||||||| |||||||    
T  30724411 atgatatgatctccaacgttcacct 30724435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 53519393 - 53519353
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttca 178  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  53519393 tttcttatcgcacaaaacacctgaggctcttctccatttca 53519353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 46145869 - 46145799
Alignment:
Q  229 ttttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    ||||||| ||||||| ||| ||||||||||||| ||||||| ||||||| || |||||||||||| |||||    
T  46145869 ttttgtactatggactcaaaatatttaaaccgtataacttgtggtatgacataatctccaactttaacctc 46145799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 44395200 - 44395080
Alignment:
Q  172 catttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-g 270  Q
    ||||||||||||  | ||||||| ||||  |||||||||   ||||||||||  |  ||| ||| ||||||||| ||||||||||| ||||||||||| |    
T  44395200 catttcaaccacttaacttgaattcgatggtttacatct---tctatttctctgttgtttagtactatggacccgagatatttaaatcgtgtaacttgcg 44395104  T
Q  271 gtatgatatgatctccaactttca 294  Q
     | || ||||||||||||||||||    
T  44395103 ttgtggtatgatctccaactttca 44395080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 3186576 - 3186500
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgctt 214  Q
    ||||||||| |  ||||||| ||| | | |||| ||||||||||||||| ||||||||||||  |||||||||||||    
T  3186576 tttcttatcacctaaaacacatgaaaatattcttcatttcaaccacccaacttgaatacgatgttttacatctgctt 3186500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 5168635 - 5168599
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccat 174  Q
    ||||||||||||||||||||||||| |||||||||||    
T  5168635 tttcttatcgcacaaaacacctgaggctcttctccat 5168599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 294
Target Start/End: Original strand, 32490249 - 32490356
Alignment:
Q  188 cttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctcc 286  Q
    ||||||| ||||| |||| ||||  |||||||| | | || | || || ||| ||||||||| |||||||  |||||||||| ||||||||||||||| |    
T  32490249 cttgaattcgatagtttatatctagttctattttttcgtcgtcttataatatagacccaagaaatttaaattgtgtaacttgtggtatgatatgatcttc 32490348  T
Q  287 aactttca 294  Q
    ||||||||    
T  32490349 aactttca 32490356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 1470683 - 1470733
Alignment:
Q  249 atatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    ||||||||||| || |||||  |||||||||||||||||||||||||||||    
T  1470683 atatttaaaccatgcaacttttggtatgatatgatctccaactttcacctc 1470733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 294
Target Start/End: Complemental strand, 15751018 - 15750888
Alignment:
Q  165 tcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgta 264  Q
    |||||| ||||||||||||| | | ||| || |||  ||||||| |||||| || ||||| || ||||| |||||| |||||| || |||||| | ||||    
T  15751018 tcttcttcatttcaaccacctaacatgagtatgatgttttacatatgcttcgatgtctccttcgttttgcattatgaacccaaaatgtttaaatcatgta 15750919  T
Q  265 acttg-ggtatgatatgatctccaactttca 294  Q
    | ||| | | | |||||||||||||||||||    
T  15750918 atttgagatgtcatatgatctccaactttca 15750888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 3301656 - 3301436
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||| ||| |    
T  3301656 tttcttatcgcacaaaacacctgaggctcatctctatttcaaccacccagcttgaatacgatgatttgcatctgcttctatttctccttcatttggtact 3301557  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  3301556 atggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--cacttctccttttgctgaagttaca 3301459  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  3301458 ttccatatactccgtcttgcttc 3301436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 3394517 - 3394298
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |    
T  3394517 tttcttatcgcacaaaacacctgaggctcatctccatttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccgtcattttgtact 3394418  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||| |||||    
T  3394417 atggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--cacttctccttttgctgaa-ttaca 3394321  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| | ||||||||||    
T  3394320 ttccatatactctgtcttgcttc 3394298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 1275072 - 1274852
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  1275072 tttcttatcgcacaaaacaccttaggctcttcttcatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 1274973  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||   ||||||||||| | ||||||||||    
T  1274972 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggtagacc--tacttctcctttcgctgaagttaca 1274875  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  1274874 ttccatatactccgtcttgcttc 1274852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 141 - 359
Target Start/End: Complemental strand, 20318795 - 20318578
Alignment:
Q  141 cttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatg 240  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||||||  | |    
T  20318795 cttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgtacgaag 20318696  T
Q  241 gacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattc 339  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |   ||||||||||  | |||||||||||||    
T  20318695 gacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagaac--tacttctccttccgctgaagttacattc 20318598  T
Q  340 catataccccgtcttgcttc 359  Q
    ||||||| ||||||||||||    
T  20318597 catatactccgtcttgcttc 20318578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 12492862 - 12493082
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  12492862 tttcttattgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 12492961  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |   ||||||||||  | ||||||||||    
T  12492962 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaacttttacctccaaggtagagc--tacttctccttccgctgaagttaca 12493059  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  12493060 ttccatatactccgtcttgcttc 12493082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 10639104 - 10638884
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  10639104 tttcttatcgcacaaaacacctaaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 10639005  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||   ||||||||||    ||||||||||    
T  10639004 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatttccaactttcacctccaaggtagacc--tacttctccttccactgaagttaca 10638907  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||| ||||    
T  10638906 ttccatatactccgtctttcttc 10638884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 28977332 - 28977552
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||   |||||||| |||||||| |||| ||||||||||      
T  28977332 tttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctacttctattactccgtcattttgtacg 28977431  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||   ||||||||||  ||||||||||||    
T  28977432 aaggacccaagatatttaaaccgtgtgacttggggtatgatatgatctccaactttcacctctaaggtagacc--tacttctccttccgttgaagttaca 28977529  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  28977530 ttccatatactccgtcttgcttc 28977552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 1288064 - 1288284
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||   |||||||||||||||||||||| ||||||||||      
T  1288064 tttcttatcgcacaaaacacatgaggctcttctccatttcaaccatccaacttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 1288163  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |  ||||||||||  | ||||||||||    
T  1288164 aaggactcaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtaga--cttacttctccttccgctgaagttaca 1288261  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  1288262 ttccatatactccgtcttgcttc 1288284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 24178331 - 24178111
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||   |||||||||||||||||||||| ||||||||||      
T  24178331 tttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccaacttgaatatgatggcttacatctgcttctatttctccgtcattttgtacg 24178232  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||   ||||||||||  | ||||||||||    
T  24178231 aaggacccaagatctttaaaccgtgtaacttagggtatgatatgatctccaactttcacttccaaggtagacc--tacttctccttccgctgaagttaca 24178134  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  24178133 ttccatatactccgtcttgcttc 24178111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 139 - 346
Target Start/End: Original strand, 16347879 - 16348084
Alignment:
Q  139 ttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatta 238  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||  |||| ||||||||| |||||||||| ||    
T  16347879 ttcttattgcacaaaacacctgaggctcttctccatttcaaccaccta-cttgaatacgatgatttacatacgcttttatttctccgtcattttgtacta 16347977  T
Q  239 tggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacat 337  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||    
T  16347978 tggacacaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttttgctgaagttacat 16348075  T
Q  338 tccatatac 346  Q
    | |||||||    
T  16348076 ttcatatac 16348084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 2075949 - 2076169
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||   |||||||||||||||||||||  ||||||||||      
T  2075949 tttcttattgcacaaaacacctgaggctcttcttcatttcaaccacccaacttgaatacgatggcttacatctgcttctatttctctgtcattttgtacg 2076048  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    |||||||||  | ||||||||||    
T  2076049 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagaac--tgcttctccttccgctgaagttaca 2076146  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||| ||| | ||||||||||    
T  2076147 ttccatgtactctgtcttgcttc 2076169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 27302451 - 27302638
Alignment:
Q  164 ctcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgt 263  Q
    ||||| |||||||||||||| || |||||||||||| ||||||||||   |||||||||||  | ||||||||||||||| |||||||||||||||||||    
T  27302451 ctcttttccatttcaaccactcaacttgaatacgatgatttacatct---tctatttctccgccgttttgtattatggacacaagatatttaaaccgtgt 27302547  T
Q  264 aacttg-ggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttg 355  Q
    |  ||| ||||||||||||||||||||  |||||| ||||||||| |   ||||  |||||||||||||||||||||||||||| | ||||||    
T  27302548 agtttgaggtatgatatgatctccaacactcaccttcaaggtagaac--tactttaccttttgttgaagttacattccatatactcagtcttg 27302638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 137 - 300
Target Start/End: Complemental strand, 36200590 - 36200426
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtat 236  Q
    |||||||||| || ||||||| |||| ||||||||||||||||||||||| ||| |||| ||| |||||||| |||| ||||||||   ||||||||||     
T  36200590 ttttcttatcacataaaacacatgagtctcttctccatttcaaccacccaacttaaatatgatgatttacatatgctactatttctatgtcattttgtac 36200491  T
Q  237 tatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctcca 300  Q
    |||| |||||| |||||||||| |||||||||| |||||||||||| |||| |||||||||||||    
T  36200490 tatgaacccaaaatatttaaacggtgtaacttgaggtatgatatgacctcccactttcacctcca 36200426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 167 - 298
Target Start/End: Original strand, 43558318 - 43558450
Alignment:
Q  167 ttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaac 266  Q
    ||||||||||| || |||| |||||||| |||| |||||||||||||||||||||||  |  |||||||  ||||||| |||||||||||| ||||||||    
T  43558318 ttctccatttccactaccctgcttgaattcgatgatttacatctgcttctatttctctgtggttttgtacaatggacctaagatatttaaatcgtgtaac 43558417  T
Q  267 ttg-ggtatgatatgatctccaactttcacctc 298  Q
    ||| |||||| ||||||||||||||||||||||    
T  43558418 ttgtggtatgctatgatctccaactttcacctc 43558450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 210 - 307
Target Start/End: Original strand, 17341748 - 17341846
Alignment:
Q  210 tgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||||||||||| |||||||| || ||||||||||| ||||||||||| ||||| ||  |||||||||||||||||||||| |||||||||||||||    
T  17341748 tgcttctatttctctatcattttctactatggacccaatatatttaaaccatgtaatttcaggtatgatatgatctccaacttccacctccaaggtaga 17341846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 43423578 - 43423656
Alignment:
Q  168 tctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggaccca 246  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||||| |||||||||| || |||||||    
T  43423578 tctccatttcaaccacccaacttgaatatgatgatttacatctgcttctgtttctccgtcattttgtactacggaccca 43423656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 34272829 - 34272768
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgat 199  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  34272829 tttcttatcgcacaaaacacctgaggctcttctccattttaaccacccaacttgaatacgat 34272768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 258
Target Start/End: Original strand, 20077305 - 20077413
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtat-tatggacccaaga 249  Q
    |||||||||||| ||||||||||||||||||| ||| | |||| | ||| |||| |||||||||  |||||||| |||||||||||  ||| |||||| |    
T  20077305 aaaacacctgaggctcttctccatttcaaccatccaacctgaaaatgatgatttgcatctgctttaatttctccgtcattttgtataaatgaacccaaaa 20077404  T
Q  250 tatttaaac 258  Q
    |||||||||    
T  20077405 tatttaaac 20077413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 27602 - 27518
Alignment:
Q  272 tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttgctt 358  Q
    |||||||||||||||||||||||||||||||| | | |   ||||| ||| |||||||||||||||||| ||||| | |||||||||    
T  27602 tatgatatgatctccaactttcacctccaaggcataac--tacttcgcctattgttgaagttacattccctatactctgtcttgctt 27518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 291
Target Start/End: Original strand, 38578992 - 38579130
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||| |||| | || ||||||||||||||| ||||||| || ||||  |||||||   ||||| |||  || |||||||||| |||  || ||||||    
T  38578992 aaaacacatgaggcactcctccatttcaaccactcagcttggattcgatcgtttacat---cttctgttttcccgtcattttgtactatcaactcaagat 38579088  T
Q  251 atttaaaccgtgtaacttg-ggtatgatatgatctccaactt 291  Q
    |||||||| |||||||||| | ||| ||||||||||||||||    
T  38579089 atttaaactgtgtaacttgtgctataatatgatctccaactt 38579130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 23979930 - 23979820
Alignment:
Q  244 ccaagatatttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccata 343  Q
    ||||||||| ||||  |||||||||   ||||||||||||||||||||||||||| ||||| || |   ||||   ||||||||||||||||||| ||||    
T  23979930 ccaagatatctaaattgtgtaacttc--tatgatatgatctccaactttcacctctaaggttgaac--tactttgtcttttgttgaagttacattacata 23979835  T
Q  344 taccccgtcttgctt 358  Q
    ||||  |||||||||    
T  23979834 taccatgtcttgctt 23979820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 6368478 - 6368561
Alignment:
Q  216 tatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    ||||||||| || ||||||| ||| ||  |||||||||||||  |||||||||| |||||| ||||||||||| ||||||||||    
T  6368478 tatttctccgtcgttttgtactatagatacaagatatttaaattgtgtaacttgtggtatgttatgatctccatctttcacctc 6368561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 21915619 - 21915532
Alignment:
Q  212 cttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    ||||||||||| | | |||||||| ||| || |||| |||||||||||||||||||||   |||||||| ||||| ||||||||||||    
T  21915619 cttctatttcttcgttattttgtactattgaaccaatatatttaaaccgtgtaacttgtattatgatataatctcgaactttcacctc 21915532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 37124278 - 37124207
Alignment:
Q  237 tatggacccaagatatttaaaccgtgtaacttgg-gtatgatatgatctccaactttcacctccaaggtaga 307  Q
    ||||||| |||| |||||||||  |||||||||  ||||||| |||||||||||||||||||| ||||||||    
T  37124278 tatggactcaagctatttaaacaatgtaacttgttgtatgatttgatctccaactttcacctctaaggtaga 37124207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 28676314 - 28676253
Alignment:
Q  159 tgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttc 221  Q
    ||||| ||||||||||||||||||| || |||||||||||| |||| ||| ||||||||||||    
T  28676314 tgagattcttctccatttcaaccacaca-cttgaatacgatgatttgcatatgcttctatttc 28676253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 3096901 - 3096828
Alignment:
Q  226 tcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    |||||||||| |||  |||||||||||||||||| ||||||||| | |  ||||||||||| ||||||||||||    
T  3096901 tcattttgtactataaacccaagatatttaaaccatgtaacttgtgctgagatatgatctctaactttcacctc 3096828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 25937780 - 25937719
Alignment:
Q  237 tatggacccaagatatttaaaccgtgtaacttgggta-tgatatgatctccaactttcacct 297  Q
    ||||||||||||||||||||   |||||| ||||| | ||||||||||||||||||||||||    
T  25937780 tatggacccaagatatttaatttgtgtaatttggggaatgatatgatctccaactttcacct 25937719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 27701 - 27622
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttcta 217  Q
    ||||||||| |  |||||||  |||||||||||| ||||| |||||||| |||||||| ||| |||||||| || |||||    
T  27701 tttcttatcacgtaaaacactcgagactcttctctatttccaccacccaacttgaatatgatgatttacatttgattcta 27622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 3e-85; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 9706583 - 9706363
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||      
T  9706583 tttcttatcgcacaaaacacctgatgctcttctccatttcaaccacccagcttgaatacgatgatttacacctgcttctatttctccatcattttgtacc 9706484  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||  |||||||||||||| ||||||||||    
T  9706483 atggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggtatacc--cacttctccttttgctgaagttaca 9706386  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| || |||||||||    
T  9706385 ttccatatactccatcttgcttc 9706363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 5631625 - 5631404
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |    
T  5631625 tttcttatcgcacaaaacacccgagactcttctccatttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccgtcattttgtact 5631526  T
Q  238 atggaccc-aagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttac 335  Q
    |||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||    
T  5631525 atggacccaaaaatatttaaaccgtgtaacttggggtatgatatgatctctaactttcacctgcaaggtagacc--cacttctccttttgctgaagttac 5631428  T
Q  336 attccatataccccgtcttgcttc 359  Q
    |||||||||||   ||||||||||    
T  5631427 attccatatactttgtcttgcttc 5631404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 5258625 - 5258845
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||| |    
T  5258625 tttctcatcgcaaaaaacacatgaggctcttctccatttcaaccacccagcttgaatacgatgatgtacatcagcttctatttctccgtcattttgtact 5258724  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||||    
T  5258725 atggacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacttccaaggtagacc--cacttctccttttgctgaagttaca 5258822  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    ||||||||||   ||||||||||    
T  5258823 ttccatatactttgtcttgcttc 5258845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 10100332 - 10100552
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||  ||||||||| |    
T  10100332 tttcttatctcacaaaacacatgaggctcttctccattccaaccacccagcttgaatacgatgatttatatcagcttctatttctccgacattttgtact 10100431  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||| ||||| | ||||||||    
T  10100432 atggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctcattttgctaaagttaca 10100529  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  10100530 ttccatatactccgtcttgcttc 10100552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 20428111 - 20428331
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| || ||||||| |    
T  20428111 tttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttggatacgatgatttacatctgcttctatttttccgtcgttttgtact 20428210  T
Q  238 atggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
     ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||   | ||||||||||| ||||||||||    
T  20428211 gtggacccaatatatttaaaccgcgtaacttgtggtatgatatgatctccaactttcacctcctaggtagacc--taattctccttttgctgaagttaca 20428308  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  20428309 ttccatatactccgtcttgcttc 20428331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 33496004 - 33495794
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||| | |||||| ||||||||||||||| | |||||||| |    
T  33496004 tttcttatcacacaaaacatctgagactcttctccatttcaaccatccagcttgaatatgatgagttacatatgcttctatttctccgttattttgtact 33495905  T
Q  238 atggacccaagatatttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacat 337  Q
    |||||||||||||         |||||||| |||||||||||||||| ||||||||||||||||||||||||   ||||||||||||| |||||||||||    
T  33495904 atggacccaagat---------gtgtaactagggtatgatatgatcttcaactttcacctccaaggtagacc--tacttctccttttgatgaagttacat 33495816  T
Q  338 tccatataccccgtcttgcttc 359  Q
    ||||||||| | ||||||||||    
T  33495815 tccatatactctgtcttgcttc 33495794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 138 - 287
Target Start/End: Complemental strand, 2689463 - 2689313
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| ||||||| || |||| | |||||||||||||| || ||||||||| |||||| ||||||||||| |||||||||||| || ||||||| |    
T  2689463 tttcttatcacacaaaatacatgaggcacttctccatttcaatcatccagcttgactacgatgatttacatctgattctatttctccgtcgttttgtact 2689364  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctcca 287  Q
    || ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  2689363 atagacccaaaatatttaaaccgtgtaacttagggtatgatatgatctcca 2689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 151 - 359
Target Start/End: Complemental strand, 27790950 - 27790743
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||| |||| |||||||| ||||||||||| || ||| | || ||| ||||| |  ||||||||||| | | |||||||||| |||||| |||||||    
T  27790950 aaaacacttgaggctcttctctatttcaaccactcaactttattatgatgatttagacttgcttctatttatgcgtcattttgtactatggatccaagat 27790851  T
Q  251 atttaaaccgtgtaacttgg-gtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatatacccc 349  Q
    ||||||||| ||||| |||| ||||  ||||| |||| || |||||||||| |||||| |   |||| ||||||||||||||||||| |||||||||||     
T  27790850 atttaaaccatgtaatttggagtattttatgacctcccaccttcacctccatggtagaac--tacttatccttttgttgaagttacactccatataccct 27790753  T
Q  350 gtcttgcttc 359  Q
    ||||||||||    
T  27790752 gtcttgcttc 27790743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 26291586 - 26291444
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| || |||| || ||||  | |||| ||||||||||| ||| |||||||||| | |||| | | ||||||||||||||||||||||| || |    
T  26291586 tttcttatcacataaaatacatgaggttattctacatttcaaccatccaacttgaatacgttgatttgcgtatgcttctatttctccatcattttctact 26291487  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatat 279  Q
    |||||| |||||||||||||| ||||||||| |||||||||||    
T  26291486 atggactcaagatatttaaacggtgtaacttagggtatgatat 26291444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 607964 - 607905
Alignment:
Q  140 tcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgat 199  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  607964 tcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 607905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 3632724 - 3632653
Alignment:
Q  237 tatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  3632724 tatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 3632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 14030613 - 14030558
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaa 193  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  14030613 tttcttatcgcacaaaacacctgagactattctccatttcaaccacccagtttgaa 14030558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 30679281 - 30679218
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataa 201  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  30679281 tttcttatcgctcaaaacacctgagcctcttctctatttcaaccacccaacttgaatacgataa 30679218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 30670556 - 30670469
Alignment:
Q  276 atatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttgcttcatctca 365  Q
    |||||||||||||||||||||||||||||| |||   ||||||||||||| | ||| ||||||| |||||| |||||||||||| |||||    
T  30670556 atatgatctccaactttcacctccaaggtatacc--tacttctccttttgctaaagatacattctatatactccgtcttgcttcttctca 30670469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 6056244 - 6056329
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttct 222  Q
    ||||||||||||| ||||||| |||  ||||||| ||||||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  6056244 ttttcttatcgcataaaacacttgaagctcttctacatttcaaccacccaacttgcctacgatattttacatatgcttctatttct 6056329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 6641916 - 6642013
Alignment:
Q  169 ctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaac 266  Q
    |||||||||||||||||| ||| ||| | ||  ||||||||| ||||||||||||  |||||||||| ||| | || |||||  |||||| |||||||    
T  6641916 ctccatttcaaccacccaactttaattcaatggtttacatctccttctatttctctctcattttgtactatagccctaagatgcttaaactgtgtaac 6642013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 895927 - 895967
Alignment:
Q  16 aaaaatatgtgttcttttcgatttatatattattttatttc 56  Q
    ||||||||||||||||||  ||||||||| |||||||||||    
T  895927 aaaaatatgtgttctttttaatttatatactattttatttc 895967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 160; Significance: 3e-85; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 27450648 - 27450868
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |    
T  27450648 tttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccatcattttgcact 27450747  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||    
T  27450748 atggacccaagatatgtaaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggtatacc--cacttctccttttgctgaagttaca 27450845  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    ||||| |||| ||||||||||||    
T  27450846 ttccaaatactccgtcttgcttc 27450868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 23906776 - 23906996
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  23906776 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 23906875  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  ||||||||||||    
T  23906876 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgttgaagttaca 23906973  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  23906974 ttccatatactccgtcttgcttc 23906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 436036 - 435816
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||| ||      
T  436036 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccactcagcttgaatacgatgacttacatctgcttctatttctccgtcattttatacg 435937  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  435936 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 435839  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||| ||||||    
T  435838 ttccatatactccgtcgtgcttc 435816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 48174568 - 48174788
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||||| ||| ||||||      
T  48174568 tttcttattgcacaaaacacctgaggctcttctccatttcaaccacctagcttgaatacgatggcttacatctgcttctatttctccgtcactttgtacg 48174667  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  48174668 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 48174765  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  48174766 ttccatatactccgtcttgcttc 48174788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 56375097 - 56374877
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||   ||| |||||||||||||||||| ||||||||||      
T  56375097 tttcttatcgcacaaaacacctgaggctcttctcaatttcaaccacccagcttgaatacgatggcttatatctgcttctatttctccgtcattttgtacg 56374998  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  56374997 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgctctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 56374900  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  56374899 ttccatatactccgtcttgcttc 56374877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 1777490 - 1777710
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||  ||||||||||      
T  1777490 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgacttacatttgcttctatttctctgtcattttgtacg 1777589  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  1777590 aaggacccaagatatttaaaacgtgtaacttggggtatgatatgatttccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 1777687  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| |||| |||||||    
T  1777688 ttccatatactccgtattgcttc 1777710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 48623002 - 48623222
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  48623002 tttcttatcgcacaaaacacctgaggcttttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 48623101  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||||||||||||||||| ||||||| || |||||||||||| ||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  48623102 aaggacccaagatatttaaatcgtgtaatttggggtatgatatgctctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 48623199  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  48623200 ttccatatactccgtcttgcttc 48623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 138 - 346
Target Start/End: Complemental strand, 33227016 - 33226809
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||||||      
T  33227016 tttcttatcgtacaaaacacctgagactcttctccatttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgtacg 33226917  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   |||| |||||  | ||||||||||    
T  33226916 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttgtccttccgctgaagttaca 33226819  T
Q  337 ttccatatac 346  Q
    ||||||||||    
T  33226818 ttccatatac 33226809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 31960289 - 31960509
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||||||      
T  31960289 tttcttatcgcacaaaacatatgaggctcttctccatttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgtacg 31960388  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  31960389 aaggacccaagatatttaaaccgtgtaaattggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 31960486  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| | ||||||||||    
T  31960487 ttccatatactctgtcttgcttc 31960509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 53707601 - 53707381
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  53707601 tttcttatcgcacaaaacatctgagtctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 53707502  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||   ||||||||||    ||||||||||    
T  53707501 aaggacccaagatatttagaccgtgtaacttggggtatgatatgatcttcaactttcacctccaaggtagacc--tacttctccttccactgaagttaca 53707404  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    ||| |||||| ||||||||||||    
T  53707403 ttcgatatactccgtcttgcttc 53707381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 138 - 346
Target Start/End: Original strand, 47265680 - 47265886
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||||| || ||||||| |||||||| ||||||||||||| |||||   |||||| ||||||||||||||| ||||||| || |    
T  47265680 tttcttatcgcacaaaacacctaaggctcttcttcatttcaatcacccagcttgaa-acgatggcttacatttgcttctatttctccgtcattttatact 47265778  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||| |||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||||   ||||||||||||| ||||||||||    
T  47265779 atggatccaagatatttaaactatgtaacttggggtatgatatgacctccaactttcacctccaaggtagacc--tacttctccttttgctgaagttaca 47265876  T
Q  337 ttccatatac 346  Q
    || |||||||    
T  47265877 tttcatatac 47265886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 39708265 - 39708044
Alignment:
Q  138 tttcttatcgcacaaaac-acctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtat 236  Q
    ||||||||| || ||||| |||| || ||||| ||||||||||||| |||||||||||||||  ||||||| |||||||||||||||| ||||||||||     
T  39708265 tttcttatcacaaaaaaccacctaaggctcttatccatttcaaccatccagcttgaatacgaggatttacacctgcttctatttctccgtcattttgtac 39708166  T
Q  237 tatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttac 335  Q
    ||| ||||||||||||||||||||  ||||||| ||||| ||||||||||||| ||||||||||||| ||||||   | ||||||||||| ||||||||     
T  39708165 tatcgacccaagatatttaaaccgcataacttgaggtataatatgatctccaaatttcacctccaagatagacc--taattctccttttgctgaagttat 39708068  T
Q  336 attccatataccccgtcttgcttc 359  Q
    ||||||||||| ||||||||||||    
T  39708067 attccatatactccgtcttgcttc 39708044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 138 - 343
Target Start/End: Complemental strand, 16002735 - 16002532
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||| |||||| |||||||| |||||||||||||||||| ||||| |||||||||| |    
T  16002735 tttcttatcacacaaaacacctgaggctcttctcaatttcaaccactcagcttaaatacgatgatttacatctgcttctatgtctccgtcattttgtact 16002636  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||| ||||||| |||||||||||||| || |||||||||||||| ||||||||| ||||||||||||||  |  ||||||||||||| | |||||| |    
T  16002635 atggaaccaagat-tttaaaccgtgtaatttggggtatgatatgatttccaacttttacctccaaggtaga--ctaacttctccttttgctaaagttata 16002539  T
Q  337 ttccata 343  Q
    |||||||    
T  16002538 ttccata 16002532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 50286778 - 50286625
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  50286778 tttcttatcgcacaaaacacatgtgactcttcttcatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 50286679  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaact 290  Q
    | |||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  50286678 aaggacacaatatatttaaaccgtgtaacttggggtatgatatgatctccaact 50286625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 17476154 - 17476063
Alignment:
Q  16 aaaaatatgtgttcttttcgatttatatattattttatttcgacacaagcttaagacacggtggtagtagattgctacggtagccattttaa 107  Q
    ||||||||||||||||||   |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17476154 aaaaatatgtgttctttttagtttatatattattttattccaacacaagcttaagacacggtggtagtagattgctacggtagccattttaa 17476063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 289
Target Start/End: Original strand, 1211864 - 1212017
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtat 236  Q
    ||||||||||  ||||||||  |||| ||||||||||||||||| ||| | |||||||||||| ||||||| |||||||||||||||  | ||||||||     
T  1211864 ttttcttatcatacaaaacatttgaggctcttctccatttcaactacctaacttgaatacgatgatttacacctgcttctatttctctgttattttgtac 1211963  T
Q  237 tatggacccaagatatttaaaccgtgtaac-ttgggtatgatatgatctccaac 289  Q
    ||||||| ||||||||||||||  |||||| |  ||||||||||||||||||||    
T  1211964 tatggacacaagatatttaaactatgtaacgtaaggtatgatatgatctccaac 1212017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 46583299 - 46583396
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgta 235  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||||||    
T  46583299 tttcttatcgcacaaaatacctgaggctcttctccatttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgta 46583396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 43433725 - 43433643
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctattt 220  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||  |||||||||||||||||||    
T  43433725 tttcttatcgcacaaaacacctgaggctcttctccatttcaatcacccagcttgaatacgatggtttacatctgcttctattt 43433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 17666526 - 17666680
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||| |||  ||||||||||||||||| | ||| |||||||||||| |||||||| ||||| ||||||| |  ||||||||| | || |||||||||    
T  17666526 aaaacacatgatgctcttctccatttcaacaatccaacttgaatacgatgatttacatttgcttttatttcttcgacattttgtactttgaacccaagat 17666625  T
Q  251 atttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||||| |||||||||  ||||||||||||||| ||| |||||||| ||| ||||    
T  17666626 atttaaactgtgtaactt--gtatgatatgatctctaacgttcacctctaagataga 17666680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 295
Target Start/End: Original strand, 54787741 - 54787878
Alignment:
Q  159 tgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaac 258  Q
    ||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||| | ||||||  | |||||||| | |||||| |||||||||||||    
T  54787741 tgagactattctccatttcaaccacccaacttaaatacgattatttacatctgcttttttttctctgtgattttgtactctggaccaaagatatttaaac 54787840  T
Q  259 cgtgtaa-cttgggtatgatatgatctccaactttcac 295  Q
    ||||||| || |||| ||||| | ||| ||||||||||    
T  54787841 cgtgtaatctggggtttgatacgttcttcaactttcac 54787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 10775975 - 10776055
Alignment:
Q  219 ttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  10775975 ttctccatcattttgtattatagacccaagatatttaaaccatgtaacttgtggtatgatatgatctccaactttcccctc 10776055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 1629208 - 1629084
Alignment:
Q  168 tctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaact 267  Q
    |||||||||||||||| ||  ||||||||||| ||||||||||||||||||||||||||| |||| || |||| |  ||||||||||||||  |||||||    
T  1629208 tctccatttcaaccactcaagttgaatacgatgatttacatctgcttctatttctccatcgttttatactatgaattcaagatatttaaactatgtaact 1629109  T
Q  268 tg-ggtatgatatgatctccaactt 291  Q
    || || | ||||||||||| |||||    
T  1629108 tgtggcacgatatgatctcaaactt 1629084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 305
Target Start/End: Original strand, 17667817 - 17667969
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    |||||||||||   | ||||| ||||  |||| ||| |||||||||||| |||||||| ||| | |||||||   |||||||||| |||| |||||| ||    
T  17667817 aaaacacctgaagtttttctctatttataccatccaacttgaatacgatgatttacatttgcgtttatttctaagtcattttgtactatgaacccaatat 17667916  T
Q  251 atttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggta 305  Q
    ||||||||  | ||||||  |||||||||||| ||||||||||||||| ||||||    
T  17667917 atttaaactatataactt--gtatgatatgatatccaactttcacctctaaggta 17667969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 30807331 - 30807244
Alignment:
Q  212 cttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    ||||||||||||  |||||||||| ||| ||| | | | ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30807331 cttctatttctcagtcattttgtactatagactccaaacatttaaaccgtgtaacttgtggtatgatatgatctccaactttcacctc 30807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 297
Target Start/End: Original strand, 7092719 - 7092847
Alignment:
Q  170 tccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt- 268  Q
    ||||||||||||||||| ||||||||  || || ||||||||| ||||||| | | | ||||| || ||| ||||||  ||||||||||||||||| ||     
T  7092719 tccatttcaaccacccaacttgaataatatgatgtacatctgcatctatttattcgttattttatactatagacccacaatatttaaaccgtgtaattta 7092818  T
Q  269 gggtatgatatgatctccaactttcacct 297  Q
     | ||||||||||||| ||||||||||||    
T  7092819 agatatgatatgatcttcaactttcacct 7092847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 52280695 - 52280807
Alignment:
Q  160 gagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaacc 259  Q
    ||||| |||||||||||||||||| || | |||||||||| |||||||  ||||||  ||||||| | |||||||| | | ||||||| ||||||||| |    
T  52280695 gagacccttctccatttcaaccacacaacgtgaatacgattatttacacttgcttcagtttctcctttattttgtactttagacccaaaatatttaaatc 52280794  T
Q  260 gtgtaacttgggt 272  Q
    ||||||| |||||    
T  52280795 gtgtaacctgggt 52280807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 298
Target Start/End: Original strand, 39754880 - 39755007
Alignment:
Q  172 catttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-g 270  Q
    ||||||||||||  | |||| || | || |||||||||| |||||||||||   || ||||||| ||| |||||| ||||||||||  |||| ||||| |    
T  39754880 catttcaaccactaaacttggattcaatgatttacatctccttctatttctttgtcgttttgtactatagacccatgatatttaaagtgtgtgacttgtg 39754979  T
Q  271 gtatgatatgatctccaactttcacctc 298  Q
    |||||||||||||| |||||||||||||    
T  39754980 gtatgatatgatcttcaactttcacctc 39755007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 41009855 - 41009922
Alignment:
Q  165 tcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcatttt 232  Q
    |||||||||||||||||||| | |||||||||||  |||||||| ||||||||||||||| |||||||    
T  41009855 tcttctccatttcaaccacctaacttgaatacgaagatttacatttgcttctatttctccgtcatttt 41009922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 54914663 - 54914781
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtat 236  Q
    |||||||||| || ||||||||  || || |||||||||||||||||     |||||||| |  ||||||||||| |||||||||||||||||||| ||     
T  54914663 ttttcttatcacataaaacaccaaag-cttttctccatttcaaccacatgatttgaatacaaggatttacatctgtttctatttctccatcattttatac 54914761  T
Q  237 tatggacccaagatatttaa 256  Q
     |||||||||||||||||||    
T  54914762 catggacccaagatatttaa 54914781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 42037604 - 42037510
Alignment:
Q  202 tttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcac 295  Q
    ||||||||| ||| ||||||||  |||||||||| ||| ||  ||||||||||||||||||||||||| || |||||||||||| ||| ||||||    
T  42037604 tttacatctccttatatttctcagtcattttgtactatagattcaagatatttaaaccgtgtaacttgtgggatgatatgatcttcaaatttcac 42037510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 45185477 - 45185542
Alignment:
Q  159 tgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctcc 224  Q
    |||| ||||||||| ||||||||||  ||||||||||| || ||||||||||||||||||||||||    
T  45185477 tgaggctcttctccctttcaaccactaagcttgaatacaatgatttacatctgcttctatttctcc 45185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 296
Target Start/End: Complemental strand, 20917762 - 20917630
Alignment:
Q  165 tcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgta 264  Q
    |||||||||||| ||||| | || |||||| |||| | |||||| || |||||||||||| |  |||| || |||||| |   ||||||||||| |||||    
T  20917762 tcttctccattttaaccatctagattgaattcgatgacttacatatgtttctatttctccgttgttttatactatggagctcggatatttaaactgtgta 20917663  T
Q  265 actt-gggtatgatatgatctccaactttcacc 296  Q
    ||||  ||||||||||||||| |||||||||||    
T  20917662 acttatggtatgatatgatcttcaactttcacc 20917630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 3273229 - 3273098
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||| |||| || ||||||  |||| ||| ||||||||||||||| ||| ||||||| ||||  |||| || |||||||||||||   || ||||||| |    
T  3273229 tttcgtatcacataaaacaaatgaggctcatctccatttcaaccatccaacttgaattcgatggtttatatttgcttctatttctttgtcgttttgtact 3273130  T
Q  238 atggacccaagatatttaaaccgtgtaacttg 269  Q
    ||||||| ||||| ||||||  ||||||||||    
T  3273129 atggacctaagatgtttaaattgtgtaacttg 3273098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 35690111 - 35690042
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacat 208  Q
    ||||||||| || |||||||| |  |||||||||||||||||||||||| |||||||||||| ||||||||    
T  35690111 tttcttatcacataaaacacccgc-actcttctccatttcaaccacccaacttgaatacgatgatttacat 35690042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 55578814 - 55578722
Alignment:
Q  165 tcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaa 257  Q
    |||||||||||| ||||||| | ||| |||||||| |||||  | ||||||||||||||  ||||||| || ||| || ||||||||||||||    
T  55578814 tcttctccattttaaccacctaacttaaatacgatgatttatgtatgcttctatttctcagtcattttatactatagatccaagatatttaaa 55578722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 359
Target Start/End: Complemental strand, 41427574 - 41427426
Alignment:
Q  210 tgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagac 308  Q
    ||||| ||||||||| ||||| |||| ||||  | ||||||||||||  |||||||||| |||||||||||||||| ||| |||||| |  ||||||||     
T  41427574 tgcttatatttctccgtcattctgtactatgagcacaagatatttaagtcgtgtaacttggggtatgatatgatcttcaattttcacttttaaggtagaa 41427475  T
Q  309 ccacacttctccttttgttgaagttacattccatataccccgtcttgcttc 359  Q
    |   |||||   ||||| |||| ||||||| ||||||||  ||||||||||    
T  41427474 c--tacttcgttttttgctgaaattacatttcatataccatgtcttgcttc 41427426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 55768963 - 55769022
Alignment:
Q  249 atatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    ||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  55768963 atatttaaaccgtgttacttgtggtatgacatgatcttcaactttcacctctaaggtaga 55769022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 55833219 - 55833278
Alignment:
Q  249 atatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    ||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  55833219 atatttaaaccgtgttacttgtggtatgacatgatcttcaactttcacctctaaggtaga 55833278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 30853131 - 30853053
Alignment:
Q  230 tttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||| |||||||||||||||||||||| ||||| |||| ||||||| ||| ||||||| ||||| ||| ||| ||||    
T  30853131 tttgtactatggacccaagatatttaaactgtgtagcttgtggtatgacatgttctccaaatttcaactctaagctaga 30853053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 269
Target Start/End: Original strand, 8917815 - 8917938
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtat-----tatggaccc 245  Q
    ||||||| |||| |||||||| |||||||  | ||| |||||| ||||| |||||  ||||||| ||||||||  |||||||||||      ||| ||||    
T  8917815 aaaacacttgaggctcttctcaatttcaattatccaacttgaaaacgatgatttatgtctgcttttatttctctgtcattttgtataattaaatgaaccc 8917914  T
Q  246 aagatatttaaaccgtgtaacttg 269  Q
    || |||||||||| ||||||||||    
T  8917915 aatatatttaaactgtgtaacttg 8917938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 8671727 - 8671507
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| | ||||||||||      
T  8671727 tttcttatcgcacaaaacacctgagtctcttctccattttaaccacccagcttgaatacgatgacttacatctgcttctatttcttcgtcattttgtacg 8671628  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||| || ||||||||||    
T  8671627 aaggacccaagatatttaaaccgtgtaacttagggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttctgctgaagttaca 8671530  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  8671529 ttccatatactccgtcttgcttc 8671507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 32083220 - 32083440
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||| |    
T  32083220 tttcttatcgcatagaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgatttacatttgcctctatttctccgtcattttgtact 32083319  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  32083320 atggacccaagatatttaaattgtgcaacttggggtatgatatgatctccaactttcacctccaaggtagacc--cacttctccttttgctgaagttaca 32083417  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  32083418 ttccatatactccgtcttgcttc 32083440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 138 - 358
Target Start/End: Complemental strand, 51601865 - 51601646
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  51601865 tttcttatcgaacaaaacacctgagactcttctctatttccaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 51601766  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  51601765 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 51601668  T
Q  337 ttccatataccccgtcttgctt 358  Q
    |||||||||| |||||||||||    
T  51601667 ttccatatactccgtcttgctt 51601646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 49347868 - 49348089
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||| |||||||||||||||| ||||||||||      
T  49347868 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatggcttacacctgcttctatttctccgtcattttgtacg 49347967  T
Q  238 atggacccaagatatttaaacc-gtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttac 335  Q
    | |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | |||||||||    
T  49347968 aaggacccaagatatttaaaccagtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttac 49348065  T
Q  336 attccatataccccgtcttgcttc 359  Q
    |||| |||||| ||||||||||||    
T  49348066 attcgatatactccgtcttgcttc 49348089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 1210552 - 1210332
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||||      
T  1210552 tttcttatcgcacaaaacacctcaggctcttcttcatttcaaccacccagcttgaatacgatggcttacatctgcttttatttctccatcattttgtacg 1210453  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |  |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  1210452 aaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 1210355  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  1210354 ttccatatactccgtcttgcttc 1210332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 43240856 - 43241076
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||   ||||||||||||| |||||||| ||||||||||      
T  43240856 tttcttattgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatggcttacatctgcttccatttctccgtcattttgtacg 43240955  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |   ||||||||||  | ||||||||||    
T  43240956 aaggatccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagatc--tacttctccttccgctgaagttaca 43241053  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  43241054 ttccatatactccgtcttgcttc 43241076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 51441240 - 51441459
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| |||   ||| |||||||||||||||||| |||||||||||     
T  51441240 tttcttatcgca-aaaacacttgaggctcttctccatttcaaccacccagcttgaatatgatggcttagatctgcttctatttctccgtcattttgtatg 51441338  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |  |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||   ||||||||||  | ||||||||||    
T  51441339 aaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcaccttcaaggtagacc--tacttctccttccgctgaagttaca 51441436  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  51441437 ttccatatactccgtcttgcttc 51441459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 138 - 305
Target Start/End: Complemental strand, 27445705 - 27445537
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| || |||||||  |  |||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  27445705 tttcttatcacataaaacactcggaactcttctccatttcaaccaaccaacttgaatacgatgatttacatctgcttctatttctccatcattttgtact 27445606  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggta 305  Q
    |||||||||| ||| |||||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  27445605 atggacccaacataattaaaccgtgtaacttggggtatgataagatctccaactttcacctgcaaggta 27445537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 138 - 346
Target Start/End: Original strand, 34827577 - 34827784
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| || ||||||| |||| |||||||||||||||||||  || ||||||||| || |||||||| ||||||||||||||| |||||||||| |    
T  34827577 tttcttatcacataaaacacatgaggctcttctccatttcaaccattcaacttgaatacaatgatttacatatgcttctatttctccgtcattttgtact 34827676  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||   | |  |  ||||||| |||||| ||||||||||    
T  34827677 atggacccaagatatttaaaccttgtaacttagggtatgatatgatctcccactttcacctccatcatgggac--cacttcttcttttgatgaagttaca 34827774  T
Q  337 ttccatatac 346  Q
    ||||||||||    
T  34827775 ttccatatac 34827784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 355
Target Start/End: Original strand, 37463355 - 37463553
Alignment:
Q  153 aacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatat 252  Q
    ||||||| || ||||||||||| ||||||||| ||||| ||||| || || ||||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  37463355 aacacctaaggctcttctccatatcaaccacctagcttaaatacaatgatatacatctgcttctatttctccgtcattttgtactatggactcaagatat 37463454  T
Q  253 ttaaaccgtgtaacttgg-gtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgt 351  Q
    |||||| |||||||| || |||||||||||||||||||||||||||||||||||||     ||| |  |||||| |||||||||||||||||||| | ||    
T  37463455 ttaaactgtgtaactcggagtatgatatgatctccaactttcacctccaaggtaga-----actccggcttttgctgaagttacattccatatactctgt 37463549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 19936329 - 19936175
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatca-ttttgtat 236  Q
    ||||||||| || ||||||| ||||  |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| ||||||||    
T  19936329 tttcttatcacataaaacacttgaggttcttatccatttcaaccacccagcttgaatacgatgatttacatatgcttctatttctccttcatttttgtat 19936230  T
Q  237 tatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaact 290  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  19936229 tatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaact 19936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 138 - 264
Target Start/End: Original strand, 30202605 - 30202731
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||| ||||||||||      
T  30202605 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccggcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 30202704  T
Q  238 atggacccaagatatttaaaccgtgta 264  Q
    | |||||||||||||||||||||||||    
T  30202705 aaggacccaagatatttaaaccgtgta 30202731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 30784596 - 30784470
Alignment:
Q  16 aaaaatatgtgttcttttcgatttatatattattttatttcgacacaagcttaagacacggtggtagtagattgctacggtagccattttaatattgctt 115  Q
    |||| |||||||||||||   |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||    
T  30784596 aaaagtatgtgttctttttagtttatatattattttattccaacacaagcttaagacgcggtggtagtagattgctatggtagccattttaaaagtgctt 30784497  T
Q  116 tacaaaggcaaatatcaatacttttct 142  Q
    |||||||||||||||||||||||||||    
T  30784496 tacaaaggcaaatatcaatacttttct 30784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 153 - 307
Target Start/End: Original strand, 32066761 - 32066913
Alignment:
Q  153 aacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatat 252  Q
    |||||||||| ||||||||||||| ||||| ||| |||||||||||| |||||||| ||||| ||||||||  |||||||||| |||| |||||| ||||    
T  32066761 aacacctgaggctcttctccattttaaccatccaacttgaatacgatgatttacatttgcttttatttctctgtcattttgtactatgaacccaaaatat 32066860  T
Q  253 ttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||| |||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  32066861 ttaaactgtgtaactt--gtatgatatgatctccaattttcacctctaaggtaga 32066913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 138 - 292
Target Start/End: Complemental strand, 51234421 - 51234267
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||| |||| || |||| ||||||| || |||||||||||||||||||| |||||||  ||| ||||||||||||||| ||||||||||||||||| | |    
T  51234421 tttcgtatcacataaaagacctgaggctattctccatttcaaccacccaacttgaatttgatgatttacatctgcttcaatttctccatcattttgcact 51234322  T
Q  238 atggacccaagatatttaaaccgtgtaacttgggtatgatatgatctccaacttt 292  Q
    |||||| ||||||||||||||  || ||||||  |||||||||||||||||||||    
T  51234321 atggactcaagatatttaaactatgaaacttgtttatgatatgatctccaacttt 51234267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 156 - 297
Target Start/End: Complemental strand, 7921716 - 7921574
Alignment:
Q  156 acctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatattta 255  Q
    ||||||||| ||  ||||||||||| ||||| ||||||| ||||  ||||||||| |||||||||||| ||| ||||||| |||||| ||||||||| ||    
T  7921716 acctgagaccctcatccatttcaacaacccaacttgaattcgatggtttacatctccttctatttctcaatcgttttgtactatggatccaagatatata 7921617  T
Q  256 aaccgtgtaacttg-ggtatgatatgatctccaactttcacct 297  Q
    || ||||||||||| |||| |||||||||||||||||||||||    
T  7921616 aatcgtgtaacttgtggtaagatatgatctccaactttcacct 7921574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 151 - 298
Target Start/End: Complemental strand, 28528375 - 28528227
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    |||||||||||| | || ||| ||||||||||||||||| | || ||||  |||||| || |||||||||||||||  |||||||  || ||||||||||    
T  28528375 aaaacacctgaggcactcctcaatttcaaccacccagctcggattcgatggtttacacctccttctatttctccattgttttgtaacatagacccaagat 28528276  T
Q  251 atttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  28528275 atttaaactgtgtaacttgtggtatgctatgatctccaactttcacctc 28528227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 164 - 307
Target Start/End: Original strand, 35828894 - 35829038
Alignment:
Q  164 ctcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgt 263  Q
    ||||| |||||||||||||| ||| | |||| |||| |||||||| ||||||||||||||| ||  |||||| |||||||||||||| ||||| | | ||    
T  35828894 ctcttttccatttcaaccacacagatcgaattcgatgatttacatatgcttctatttctccgtcgctttgtactatggacccaagatgtttaagcagcgt 35828993  T
Q  264 aacttg-ggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||| |||||||||||||||| | |||||||||||||||||||    
T  35828994 aacttgtggtatgatatgatctctagctttcacctccaaggtaga 35829038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 22089902 - 22089826
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgct 213  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  22089902 ttttcttattgcacaaaacatctgagactcttctccatttcaaccacccagcttgaatacgatgacttacatctgct 22089826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 6640898 - 6640772
Alignment:
Q  173 atttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-gg 271  Q
    |||||||||||||| |||| || | ||  |||||| || ||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||||||| ||    
T  6640898 atttcaaccacccaacttggatccaatggtttacacctccttctatttctccataattttgtactatagactcaagatatttaaaccgtgtaacttgtgg 6640799  T
Q  272 tatgatatgatctccaactttcacctc 298  Q
    | | |||||||||| ||||||||||||    
T  6640798 tgtaatatgatctctaactttcacctc 6640772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 52739965 - 52740098
Alignment:
Q  161 agactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccg 260  Q
    |||||||||||||||||||||| ||| ||||| || ||| | |||||||| ||||||||||||| ||| |||||| ||| |  |||| ||||| ||||||    
T  52739965 agactcttctccatttcaaccatccaacttgagtaagatgacttacatctacttctatttctccgtcactttgtactataggtccaaaatattcaaaccg 52740064  T
Q  261 tgtaacttgggtatgatatgatctccaactttca 294  Q
    || |||||  | ||||||||||||||||||||||    
T  52740065 tgcaacttaagcatgatatgatctccaactttca 52740098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 9592541 - 9592463
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttct 216  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||   |||| |||||||||    
T  9592541 tttcttatcgcacaaaacacccgagactcttctccatttcaaccacccaacttgaatacgatggcttacctctgcttct 9592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 307
Target Start/End: Original strand, 12807587 - 12807732
Alignment:
Q  164 ctcttctccatttcaa-ccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtg 262  Q
    |||||||||||||||| ||||| ||  | ||| |||| ||||||||| |||||||||||| | || |||| || |||||| ||||||||||||||  |||    
T  12807587 ctcttctccatttcaaaccacctagaataaattcgatgatttacatcagcttctatttcttcgtcgttttatactatggatccaagatatttaaattgtg 12807686  T
Q  263 taacttg-ggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||||  |||||||| ||||  ||||||||||||| ||||||||    
T  12807687 taacttgtagtatgatacgatcctcaactttcacctctaaggtaga 12807732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 8391577 - 8391525
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagctt 190  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8391577 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagctt 8391525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 360
Target Start/End: Complemental strand, 52421210 - 52421016
Alignment:
Q  163 actcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtg 262  Q
    ||||||||| |||||||||||||| ||||||| |||| ||| |||| ||||| |||||||   || ||||||| ||  |||||||| |||||||| | ||    
T  52421210 actcttctctatttcaaccacccaacttgaattcgatgattaacatatgcttttatttctatgtc-ttttgtactaaagacccaagctatttaaa-cttg 52421113  T
Q  263 taacttg-ggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttgcttca 360  Q
    ||||||| || ||||||||||||| |||||||||||  ||||||||   | ||||| ||||||| |||| || |||| |||||| |  |||||||||||    
T  52421112 taacttgtggcatgatatgatctctaactttcacctataaggtaga--gatacttcaccttttgctgaaattccatttcatatatcatgtcttgcttca 52421016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 46226757 - 46226853
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgta 235  Q
    ||||||| | || ||||||| |||  ||||||||||||||||||| ||| ||||||||| || |||||||||||||| | ||||||||||||||||||    
T  46226757 tttcttagcacataaaacacttgatgctcttctccatttcaaccatccaacttgaatacaat-atttacatctgcttttgtttctccatcattttgta 46226853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 40419381 - 40419328
Alignment:
Q  245 caagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacct 297  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  40419381 caagatatttaaactgtgtaacttgtggtatgatatgatctccaactttcacct 40419328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 46226887 - 46226956
Alignment:
Q  238 atggacccaagatatttaaaccgtgtaact-tgggtatgatatgatctccaactttcacctccaaggtag 306  Q
    ||||||||||||||||||||||||||||||   |||||| ||||||||||||||| ||||||||| ||||    
T  46226887 atggacccaagatatttaaaccgtgtaactcaaggtatggtatgatctccaacttgcacctccaaagtag 46226956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 3877621 - 3877495
Alignment:
Q  173 atttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-gg 271  Q
    ||||||| ||||||  ||||||  ||| | ||| || |||||||||||||||||| |||| ||||||||||||| ||||||||||  |||||| ||| |     
T  3877621 atttcaagcacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 3877522  T
Q  272 tatgatatgatctccaactttcacctc 298  Q
     ||||||| |||||||| ||| |||||    
T  3877521 aatgatataatctccaatttttacctc 3877495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 16142399 - 16142487
Alignment:
Q  213 ttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctcca 300  Q
    |||| ||||| | ||||||||||||||| ||||||||||||||||  |||| ||||||| |||||||||  |||| || ||||||||||    
T  16142399 ttctttttcttcgtcattttgtattatgaacccaagatatttaaaatgtgtcacttgggatatgatatgccctcccaccttcacctcca 16142487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 11331568 - 11331666
Alignment:
Q  167 ttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaac 266  Q
    |||||||||| ||||| ||| ||| ||  || |||||||||||||||||||||||||  |||||     ||||||||| || ||||||||| ||||||||    
T  11331568 ttctccatttaaaccatccaacttaaaagcggtaatttacatctgcttctatttctctgtcatt-----ttatggaccaaatatatttaaatcgtgtaac 11331662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 11489589 - 11489687
Alignment:
Q  167 ttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaac 266  Q
    |||||||||| ||||| ||| ||| ||  || |||||||||||||||||||||||||  |||||     ||||||||| || ||||||||| ||||||||    
T  11489589 ttctccatttaaaccatccaacttaaaagcggtaatttacatctgcttctatttctctgtcatt-----ttatggaccaaatatatttaaatcgtgtaac 11489683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 52641033 - 52641093
Alignment:
Q  242 acccaagatatttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggt 304  Q
    |||||| |||||||||  ||||||||||  ||||||||||||||||||||||||||| |||||    
T  52641033 acccaatatatttaaattgtgtaacttg--tatgatatgatctccaactttcacctctaaggt 52641093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 52640920 - 52640997
Alignment:
Q  158 ctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgta 235  Q
    ||||| ||||||| ||||||||| |  || ||||||||||||||||||||| ||||| ||| ||||  ||||||||||    
T  52640920 ctgaggctcttcttcatttcaacaattcaacttgaatacgataatttacatatgcttttatctctctgtcattttgta 52640997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 21275708 - 21275588
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||  | ||| ||| ||||||||||||  ||||||||||| ||||||| || | || |||||||||  ||| ||| ||||  || ||||| | |    
T  21275708 tttcttatcaaataaagcacatgagactcttctttatttcaaccactcagcttggattcaatgatttacatcaacttttatatctctgtcgttttgcact 21275609  T
Q  238 atggacccaagatatttaaac 258  Q
    || ||||||||||||||||||    
T  21275608 atcgacccaagatatttaaac 21275588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 16273415 - 16273471
Alignment:
Q  246 aagatatttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggt 304  Q
    ||||||||||||  ||||||||||  ||||||||||||||||||||||| ||| |||||    
T  16273415 aagatatttaaattgtgtaacttg--tatgatatgatctccaactttcatctctaaggt 16273471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 5e-78; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 38606812 - 38606593
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | |||||||||| |    
T  38606812 tttcttatcgcacaaaacacctaaggctcttctccatttcaaccacccagcttgaatacgatggtttacatctgcttctatttcttcgtcattttgtact 38606713  T
Q  238 atggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||   || |||||    
T  38606712 atggacccaagatatttaaaccgtgtaacttgggatatgatatgatctccaactttcacct-caaggtagacc--cacttctccttttgcaaaaattaca 38606616  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  38606615 ttccatatactccgtcttgcttc 38606593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 46356326 - 46356546
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||| ||||||||||      
T  46356326 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatacgatggcttacatctgcttctatttctccgtcattttgtaca 46356425  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | ||||||||||    
T  46356426 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagttaca 46356523  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  46356524 ttccatatactccgtcttgcttc 46356546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 36651801 - 36651581
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  36651801 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 36651702  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||  | ||||||| ||    
T  36651701 aaggacccaagatatttaaaccgcgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttcttcttccgctgaagttcca 36651604  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  36651603 ttccatatactccgtcttgcttc 36651581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 37616723 - 37616503
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| ||||||||||      
T  37616723 tttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacaatggcttacatctgcttctatttctccgtcattttgtaca 37616624  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | |||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||   |||||||||| || ||||||||||    
T  37616623 aaggacccaagatatttaaatcgtgtaacttggggtatgatatgatctccacctttcacctccaaggtagacc--tacttctccttctgctgaagttaca 37616526  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  37616525 ttccatatactccgtcttgcttc 37616503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 33350281 - 33350501
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  33350281 tttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 33350380  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |  ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||  | ||||||||||    
T  33350381 aaagaccctagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttcttcttccgctgaagttaca 33350478  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    ||||||||||  |||||||||||    
T  33350479 ttccatatacttcgtcttgcttc 33350501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 142 - 353
Target Start/End: Complemental strand, 11593763 - 11593552
Alignment:
Q  142 ttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatgg 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||  | ||    
T  11593763 ttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccatcattttgtacgaagg 11593664  T
Q  242 acccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttt-tgttgaagttacattc 339  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||   |||||||||||  | ||||||||||||     
T  11593663 acccaagatatttaaaccgtctaacttggggtatgatatgatcttcaactttcacctccaaggtagacc--tacttctcctttccgctgaagttacattt 11593566  T
Q  340 catataccccgtct 353  Q
    ||||||| ||||||    
T  11593565 catatactccgtct 11593552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 31005030 - 31004811
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||| ||||||||||      
T  31005030 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 31004931  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | |||||| |||    
T  31004930 aaggagccaagatatttaaa-cgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagtaaca 31004834  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| | ||||||||||    
T  31004833 ttccatatactctgtcttgcttc 31004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 48919195 - 48918975
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||| ||||||||||||||| |||||||||| |    
T  48919195 tttcttatcgcacaaaacacctgaggctcttctccatttcaactacccagcttgaatacgatgattcacatatgcttctatttctccgtcattttgtact 48919096  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||| |||| |||||||||||||||||||| |||| | ||||||||||| ||||| |||| ||| |||||||   |||||||| |||| |||||| |||    
T  48919095 atggatccaaaatatttaaaccgtgtaacttggggtgtaatatgatctcctacttttaccttcaatgtagacc--tacttctccatttgctgaagtcaca 48918998  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  48918997 ttccatatactccgtcttgcttc 48918975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 32630402 - 32630194
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||| || ||             ||||||||||||||||| |    
T  32630402 tttcttatcgcacaaaacactcgaggctcttctccatttcaactacccagcttgaatacgatgatgtaa------------ttctccatcattttgtaat 32630315  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  32630314 atggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--cacttctccttttgctgaagttaca 32630217  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  32630216 ttccatatactccgtcttgcttc 32630194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 39906850 - 39907074
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaac----cacccagcttgaatacgataatttacatctgcttctatttctccatcattttg 233  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||||||||   || ||||| ||||||||||||| ||||||||    
T  39906850 tttcttatcgcacaaaacatctgaggctcttctccatttcaaccaaccacccagcttgaatacgatggcttgcatctacttctatttctccgtcattttg 39906949  T
Q  234 tattatggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagt 332  Q
    ||  |  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||   ||||||||||  | ||||||    
T  39906950 tacgaatgacccaagatatttaaaccgtgtaacatgggatatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctgaagt 39907047  T
Q  333 tacattccatataccccgtcttgcttc 359  Q
    |||||||||||||| ||||||||||||    
T  39907048 tacattccatatactccgtcttgcttc 39907074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 36869764 - 36869984
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||| | |||||||||| |    
T  36869764 tttcttatcgcacaaaacccctgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttttatttcttcgtcattttgtact 36869863  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||||| ||||||||||||||||| |||| || |||||||||||| ||||||||||||||||||| ||||||  || ||||  ||||||  ||||||||||    
T  36869864 atggatccaagatatttaaaccgcgtaatttggggtatgatatgctctccaactttcacctccagggtaga--catactttcccttttcctgaagttaca 36869961  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    ||||||||||   ||||||||||    
T  36869962 ttccatatactatgtcttgcttc 36869984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 137 - 359
Target Start/End: Complemental strand, 49029089 - 49028854
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaacca--------------cccagcttgaatacgataatttacatctgcttctatttct 222  Q
    |||||||||||||||||||||||||| |||||||||||||||||||              |||||||||||||||||    |||||||||||||||||||    
T  49029089 ttttcttatcgcacaaaacacctgaggctcttctccatttcaaccaaccacaaccaaccacccagcttgaatacgatggcatacatctgcttctatttct 49028990  T
Q  223 ccatcattttgtattatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctcct 321  Q
    |||||||||||||  | ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||   |||||||||    
T  49028989 ccatcattttgtacaaaggacccaagatatttaaaccgtgtaacttggggtatgatctgatctccaactttcacctccaaggtagacc--tacttctcct 49028892  T
Q  322 tttgttgaagttacattccatataccccgtcttgcttc 359  Q
    |    |||||||||||||||||||| ||||||||||||    
T  49028891 tcccctgaagttacattccatatactccgtcttgcttc 49028854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 182 - 355
Target Start/End: Original strand, 24177714 - 24177886
Alignment:
Q  182 acccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt-gggtatgatatg 280  Q
    ||||| |||||||| ||| |||||||||||||||||||||||| |||||||||| ||| |||||  |||||||||||||||||| || ||||||||||||    
T  24177714 acccaacttgaatatgatgatttacatctgcttctatttctccgtcattttgtactattgacccgtgatatttaaaccgtgtaaattggggtatgatatg 24177813  T
Q  281 atctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtcttg 355  Q
    ||||||||| |||| || |||| ||||||   |||||| |||||| |||||||||||||||||||| || |||||    
T  24177814 atctccaaccttcatctacaagctagacc--tacttcttcttttgctgaagttacattccatatactccatcttg 24177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 35906676 - 35906796
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  35906676 tttcttatcgcacaaaacacctgaagatcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacg 35906775  T
Q  238 atggacccaagatatttaaac 258  Q
    | |||||||||||||||||||    
T  35906776 aaggacccaagatatttaaac 35906796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 43281483 - 43281389
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcatttt 232  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  43281483 tttcttatcgcacaaaacgcctgaggctcttctccatttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccgtcatttt 43281389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 24550178 - 24550320
Alignment:
Q  152 aaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagata 251  Q
    |||||| |||||| || |||||||||||||||||| ||||||| | | ||||||||||| ||||||||  ||| || ||||||| |||||||  ||||||    
T  24550178 aaacacgtgagaccctcctccatttcaaccacccaacttgaattcaacaatttacatctccttctattaatccgtcgttttgtaatatggactaaagata 24550277  T
Q  252 tttaaaccgtgtaacttgggtatgatatgatctccaactttcacctc 298  Q
    |||||| |||||||||    ||||||||||||| |||||||||||||    
T  24550278 tttaaatcgtgtaact----tatgatatgatcttcaactttcacctc 24550320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 33072761 - 33072666
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttg 233  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||   ||||||||||||||| || ||| ||||||||    
T  33072761 tttcttatcgcacaaaacacttgaggctcttctccatttcaaccatccaacttgaatacgatggcttacatctgcttctaattatccgtcattttg 33072666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 21517826 - 21517959
Alignment:
Q  164 ctcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgt 263  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||| || |  ||||||| | ||| |||||| |||| | ||||||||||||||| ||||    
T  21517826 ctcttctcgatttcaaccacccaacttgaatatgatgatttacatatgttattatttcttcgtca-tttgtactatgaatccaagatatttaaactgtgt 21517924  T
Q  264 aacttg-ggtatgatatgatctccaactttcacct 297  Q
    || ||| ||||| || || ||||||||||||||||    
T  21517925 aaattgaggtatcatgtggtctccaactttcacct 21517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 34869227 - 34869170
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaata 195  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  34869227 tttcttatcgcacaaaacgcctgaggctcttctccaattcaaccacccagcttgaata 34869170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 43793592 - 43793676
Alignment:
Q  215 ctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctc 298  Q
    |||||||| | |||||||||| ||| |||||||||||||||||  |||||||| | |||||||||||||||| ||||||||||||    
T  43793592 ctatttcttcgtcattttgtactatagacccaagatatttaaaatgtgtaactagtggtatgatatgatctctaactttcacctc 43793676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 7272846 - 7272780
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataattta 205  Q
    ||||||||| ||||||| ||||||| || ||||| || |||||||||||||||||||||||| |||||    
T  7272846 tttcttatcacacaaaatacctgaggct-ttctcaatctcaaccacccagcttgaatacgatgattta 7272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 291
Target Start/End: Complemental strand, 18637371 - 18637233
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||| |||| | || ||||||||||||  | ||||||| || ||||  |||||||||   |||||||| || |||||||||| |||  ||  |||||    
T  18637371 aaaacacatgaggcactcctccatttcaactgctcagcttggattcgatggtttacatct---tctatttccccgtcattttgtactatcaacttaagat 18637275  T
Q  251 atttaaaccgtgtaacttg-ggtatgatatgatctccaactt 291  Q
    |||||||  |||||||||| | ||||||||||||||||||||    
T  18637274 atttaaaatgtgtaacttgtgatatgatatgatctccaactt 18637233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 291
Target Start/End: Complemental strand, 18650806 - 18650668
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||| |||| | || ||||||||||||  | ||||||| || ||||  |||||||||   |||||||| || |||||||||| |||  ||  |||||    
T  18650806 aaaacacatgaggcactcctccatttcaactgctcagcttggattcgatggtttacatct---tctatttccccgtcattttgtactatcaacttaagat 18650710  T
Q  251 atttaaaccgtgtaacttg-ggtatgatatgatctccaactt 291  Q
    |||||||  |||||||||| | ||||||||||||||||||||    
T  18650709 atttaaaatgtgtaacttgtgatatgatatgatctccaactt 18650668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 23087603 - 23087694
Alignment:
Q  164 ctcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatattta 255  Q
    ||||| ||||||||||||| | | ||||||||| || ||||||||   ||| ||||||||| |||||||||| |||| |||||||| |||||    
T  23087603 ctcttttccatttcaaccatctaacttgaatacaatgatttacatacacttttatttctccttcattttgtactatgaacccaagagattta 23087694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 18608199 - 18608319
Alignment:
Q  169 ctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaactt 268  Q
    ||||||||||||  | ||||||| || ||||  |||||||||   |||||||| || |||||||||| |||  ||  ||||||||||||  |||||||||    
T  18608199 ctccatttcaactgctcagcttggattcgatggtttacatct---tctatttccccgtcattttgtactatcaacttaagatatttaaaatgtgtaactt 18608295  T
Q  269 g-ggtatgatatgatctccaactt 291  Q
    | | ||||||||||||||||||||    
T  18608296 gtgatatgatatgatctccaactt 18608319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 5843177 - 5843105
Alignment:
Q  212 cttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatc 283  Q
    |||| |||||| |||| |||||||||||  ||| || ||||||||| ||||||||||| ||||||||||||||    
T  5843177 cttcgatttcttcatcgttttgtattataaacctaaaatatttaaatcgtgtaacttgtggtatgatatgatc 5843105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 18626639 - 18626559
Alignment:
Q  212 cttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactt 291  Q
    |||||||||| || |||||||||| |||  ||  ||||||||||||  |||||||||| | ||||||||||||||||||||    
T  18626639 cttctatttccccgtcattttgtactatcaacttaagatatttaaaatgtgtaacttgtgatatgatatgatctccaactt 18626559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 33139077 - 33139006
Alignment:
Q  139 ttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatct 210  Q
    |||||| ||||||| |||| | |  |||||||||||||||| |||||| | |||||||||| ||||||||||    
T  33139077 ttcttagcgcacaatacacattaagctcttctccatttcaatcacccaacatgaatacgatgatttacatct 33139006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 7189707 - 7189777
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacat 208  Q
    |||||||||  | ||||||||||||||| ||||||||||||||||| || | | ||||| || ||||||||    
T  7189707 tttcttatcaaataaaacacctgagacttttctccatttcaaccactcaacataaatacaatgatttacat 7189777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 23404225 - 23404181
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaacca 182  Q
    ||||||||| || |||||||||||| ||||||||||||| |||||    
T  23404225 tttcttatctcagaaaacacctgaggctcttctccattttaacca 23404181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 42854479 - 42854708
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||      
T  42854479 tttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccagcttgaatacgatgatttacatctgcttctatttctcaaacattttgtacg 42854578  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccac----actt---ctccttttgttga 329  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||     |||   ||||||||| |||    
T  42854579 atggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccacctttcacctccaaggtagacccacttctccttttgctccttttgctga 42854678  T
Q  330 agttacattccatataccccgtcttgcttc 359  Q
    ||||||||||||||||| ||||||||||||    
T  42854679 agttacattccatatactccgtcttgcttc 42854708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 36565716 - 36565936
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||      
T  36565716 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtaca 36565815  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  ||||||||||||    
T  36565816 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgttgaagttaca 36565913  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    || ||||||| |  |||||||||    
T  36565914 tttcatatactctatcttgcttc 36565936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 12492317 - 12492537
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| | |||||||||||  |||||||||||||||||||||| ||||||||||      
T  12492317 tttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccaacctgaatacgatagcttacatctgcttctatttctccgtcattttgtacg 12492416  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   |||| |||||  | ||||||||||    
T  12492417 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttatccttccgctgaagttaca 12492514  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| ||||||||||||    
T  12492515 ttccatatactccgtcttgcttc 12492537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 138 - 355
Target Start/End: Original strand, 4032969 - 4033185
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||| ||||| ||||||||||||||| |||| |    
T  4032969 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatatgatgatttacatatgcttttatttctccatcattgtgtact 4033068  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    ||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    || ||||||||| ||||||||||    
T  4033069 atgaacccaagatacttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggtagacc--ttctactccttttgctgaagttaca 4033166  T
Q  337 ttccatataccccgtcttg 355  Q
    |||||||||| ||||||||    
T  4033167 ttccatatactccgtcttg 4033185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 36544959 - 36544739
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| | |||||||||||||||||||||| ||||||||||      
T  36544959 tttcttatcgcacaaaacacctgaggctcttatccatttcaaccacccaacttgaatacgatgacttacatctgcttctatttctccgtcattttgtacg 36544860  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |  | |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||  | | ||||||||    
T  36544859 aaagccccatgatatttaaaccttgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc--tacttctccttccgctaaagttaca 36544762  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| | ||||||||||    
T  36544761 ttccatatactctgtcttgcttc 36544739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 15215746 - 15215965
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgc-ttctatttctccatcattttgtat 236  Q
    ||||||| ||||||| ||||  ||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||   ||| ||||||     
T  15215746 tttcttaccgcacaagacactggaggctcttctccatttcaaccacctagcttgaatacgatgatttacatctgctttctatttct--gtcactttgtac 15215843  T
Q  237 tatggacccaagatatttaaaccgtgtaac-ttgggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttac 335  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||    
T  15215844 tatggacccaatatatttaaaccgtgtaactttgggtatgatatgatctccaactttcacctccatggtagacc--cacttctccttttgctgaagttac 15215941  T
Q  336 attccatataccccgtcttgcttc 359  Q
    ||| ||| ||| ||||||||||||    
T  15215942 atttcatgtactccgtcttgcttc 15215965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 8879909 - 8880129
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||||| ||  ||||||| |||||||||| ||| | ||||||||||  | | |||||| |||||||||||| |||||||||| |    
T  8879909 tttcttatcgcacaaaacacctaaggttcttctctatttcaaccatccaacatgaatacgatgctattcatctggttctatttctccttcattttgtact 8880008  T
Q  238 atggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |||  ||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| || ||| ||||   ||||||||||||| ||||||||||    
T  8880009 atgagcccaagatatttaaaccgtgtaacttgggatatgatatgattttcaactttcaccttcacggtcgacc--tacttctccttttgctgaagttaca 8880106  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    || ||| ||| ||||||||||||    
T  8880107 tttcatgtactccgtcttgcttc 8880129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 137 - 307
Target Start/End: Complemental strand, 13984842 - 13984672
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtat 236  Q
    |||||||||| || ||||||| |||| ||||||| ||||||||||| ||| ||| |||||||| |||||||||||||| |||||||   ||||||| ||     
T  13984842 ttttcttatcacataaaacacttgaggctcttcttcatttcaaccatccaacttaaatacgatgatttacatctgcttttatttctttgtcatttt-tac 13984744  T
Q  237 tatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| |  ||||||||| |||||||||    
T  13984743 tatggacccaagatatttaaaccgtgtatcttggggtatgatatgatcttcttctttcaccttcaaggtaga 13984672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 138 - 297
Target Start/End: Complemental strand, 18124983 - 18124825
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||| || ||||||||||||  | ||||||||||||||||  |||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  18124983 tttcttatcacataaaacacctgaggtttttctccatttcaaccattcagcttgaattcgatgagttacatctgcttctatttctccatcattttgtatt 18124884  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacct 297  Q
    |||||  ||| ||||||||||| | |||||| || |||| ||||||||| |||||| ||||    
T  18124883 atgga--caaaatatttaaaccatataacttaggatatggtatgatctcaaacttttacct 18124825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 151 - 304
Target Start/End: Original strand, 28300596 - 28300747
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    |||||| | ||| |||||||||| || ||||| ||| |||||||||||| || ||||||||||| ||| ||||  ||||||||||  ||| |||||||||    
T  28300596 aaaacatccgagtctcttctccaatttaaccatccaacttgaatacgatgatgtacatctgcttttatatctcagtcattttgtaccatgaacccaagat 28300695  T
Q  251 atttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggt 304  Q
    |||||||| |||||||||  ||||||||||||||||| |||||||||| |||||    
T  28300696 atttaaactgtgtaactt--gtatgatatgatctccagctttcacctctaaggt 28300747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 25300044 - 25299950
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcatttt 232  Q
    ||||||||||||||||||||||||| |||||||||||||||| | ||| ||||| ||||||| |||||||| |||||||||||| ||||||||||    
T  25300044 tttcttatcgcacaaaacacctgaggctcttctccatttcaaaccccctgcttgcatacgatgatttacatatgcttctatttccccatcatttt 25299950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 25439343 - 25439249
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcatttt 232  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| || ||||| ||||||| |||||||| ||||||||||||||| |||||||    
T  25439343 tttcttatcacacaaaacacccgagactcttctccatttcaaccatcctgcttgcatacgatgatttacatatgcttctatttctccgtcatttt 25439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 295
Target Start/End: Original strand, 19293776 - 19293913
Alignment:
Q  159 tgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaac 258  Q
    ||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||| | ||||||  | |||||||| | |||||| |||||||||||||    
T  19293776 tgagactattctccatttcaaccacccaacttaaatacgattatttacatctgcttttttttctctgtgattttgtactctggaccaaagatatttaaac 19293875  T
Q  259 cgtgtaa-cttgggtatgatatgatctccaactttcac 295  Q
    ||||||| || |||| ||||| | ||| ||||||||||    
T  19293876 cgtgtaatctggggtttgatacgttcttcaactttcac 19293913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 292
Target Start/End: Original strand, 30113671 - 30113827
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttc-tatttctccatcattttgtat 236  Q
    ||||||||| || |||||||||| |||||||||||||||||||||   ||||||||||| || ||||||||||||||| | ||||||| ||||||| |||    
T  30113671 tttcttatcacataaaacacctgcgactcttctccatttcaaccatttagcttgaatacaatgatttacatctgcttcttttttctccgtcattttatat 30113770  T
Q  237 tatggacccaagatatttaaaccgtgtaacttgg-gtatgatatgatctccaacttt 292  Q
    ||  ||  |||||||||| |||  | ||| |||| ||||||||||||||||||||||    
T  30113771 tacagattcaagatatttgaactatataatttggagtatgatatgatctccaacttt 30113827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 307
Target Start/End: Original strand, 41444809 - 41444949
Alignment:
Q  169 ctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatta-tggacccaagatatttaaaccgtgtaact 267  Q
    ||||||||||||||||  ||||| || | || |||||||  ||||||||||||| ||||||||||||| | || ||||||||||||||||||  ||||||    
T  41444809 ctccatttcaaccaccttgcttgtattcaatgatttacacttgcttctatttctacatcattttgtatcattgaacccaagatatttaaaccaagtaact 41444908  T
Q  268 tg-ggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    || |||||||||||||||||| |||||||||| ||| ||||    
T  41444909 tgtggtatgatatgatctccacctttcacctctaagttaga 41444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 29735592 - 29735454
Alignment:
Q  163 actcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtg 262  Q
    |||| ||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||| |||||||| | |||||||        |||||| |||     
T  29735592 actcatctccatttcaaccacccaacttgaataagatgatttacatatgcttctatttctccgtcattttgaactatggac-------gtttaaatcgta 29735500  T
Q  263 taactt-gggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||    
T  29735499 taacttggggtatgatatgatctcccactttcacctccatggtaga 29735454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 37077569 - 37077490
Alignment:
Q  141 cttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctattt 220  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  37077569 cttatcacacaaaacacctgagactcttctccatttcaaccacttagcttgaatacgatgatttacatcggcttctattt 37077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 35601799 - 35601686
Alignment:
Q  143 tatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatgga 242  Q
    |||| |||||||||| ||||| ||||||||||||| | ||||||  |||||| ||||||||||||||| | ||||||||||  |||||||||||||||||    
T  35601799 tatcacacaaaacacttgagagtcttctccatttctatcacccaa-ttgaattcgataatttacatctacgtctatttctctgtcattttgtattatgga 35601701  T
Q  243 cccaagatatttaaa 257  Q
     ||||||||||||||    
T  35601700 tccaagatatttaaa 35601686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 33830721 - 33830875
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||| |||||||||||  ||||| ||||| ||| |||||| ||||| |||||||| ||||| ||||||| | ||||||||||  |||||||||| ||    
T  33830721 aaaacacttgagactcttcaacattttaaccatccaacttgaacacgatgatttacatatgcttttatttcttcgtcattttgtacaatggacccaaaat 33830820  T
Q  251 atttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggtaga 307  Q
    |||||||| |||||||||   ||||||| ||| |||||||||||  || ||||||||    
T  33830821 atttaaactgtgtaactt--atatgataagatatccaactttcatgtctaaggtaga 33830875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 298
Target Start/End: Complemental strand, 38667351 - 38667205
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||| | || |||| ||| |||||||||| ||| ||| |||||||| |||||||||| ||| |||||||| ||| ||||||| |||| |||||||||    
T  38667351 aaaacacattaggctctactctatttcaaccatccaactttaatacgatgatttacatcttcttttatttctctatcgttttgtactatgaacccaagat 38667252  T
Q  251 attt-aaaccgtgtaacttgggtatgatatgatctccaactttcacctc 298  Q
    |||| ||||  ||||||||  |||||||||||||||||| |||||||||    
T  38667251 atttaaaactttgtaactt--gtatgatatgatctccaagtttcacctc 38667205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 359
Target Start/End: Complemental strand, 25985334 - 25985129
Alignment:
Q  151 aaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagat 250  Q
    ||||||| |||| | || |||||||||||| |||||  ||| || | ||  ||||||||| |||||||||||||||  ||||||| ||| || |||| ||    
T  25985334 aaaacacttgaggcactcctccatttcaactacccattttggattcaatggtttacatctccttctatttctccatatttttgtactatagatccaatat 25985235  T
Q  251 atttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatatacccc 349  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||| ||| ||||   |  |||| ||| ||| | || ||||||||||||||| |     
T  25985234 atttaaaccgtgtaacttgtggtatgatatga--tccaactttcacctctaagctaga--aatgcttcgcctcttgctaaacttacattccatatactct 25985139  T
Q  350 gtcttgcttc 359  Q
    ||||||||||    
T  25985138 gtcttgcttc 25985129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 346
Target Start/End: Original strand, 18849624 - 18849797
Alignment:
Q  160 gagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaacc 259  Q
    ||||||||| ||||||||||||||||||||||     ||| |||||||| ||||||||||||||| ||| ||| || ||       ||||||||||||||    
T  18849624 gagactcttatccatttcaaccacccagcttg-----gatgatttacatttgcttctatttctccgtcactttatacta-------aagatatttaaacc 18849711  T
Q  260 gtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatatac 346  Q
    ||||||||| |||||||||||||||||||| ||| ||||| |||| | | |   ||||| ||||||||||| |||| |||||||||||    
T  18849712 gtgtaacttggggtatgatatgatctccaatttttacctctaaggcataac--tacttcaccttttgttgacgttatattccatatac 18849797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 25288709 - 25288613
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaacca--cccagcttgaatacgataatttacatctgcttctatttctccatcatttt 232  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||  ||| ||||| ||||||| |||||||| |||||||||||| || |||||||    
T  25288709 tttcttatcgcacaaaacacctgaggctcttctccatttcaaacaccccctgcttgcatacgatgatttacatatgcttctatttccccgtcatttt 25288613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 300
Target Start/End: Complemental strand, 13589247 - 13589084
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||| ||| ||||||| | || ||||||||||||||||||| ||| |||||||| | | |||| ||| ||||||||||||| ||||||||| || |    
T  13589247 tttcttatagcataaaacacatcaggctcttctccatttcaaccatccaccttgaatatggtgattttcatatgcttctatttcttcatcattttatact 13589148  T
Q  238 atggacccaagatatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacctcca 300  Q
    |  ||||||| || |||  | | ||||||||||| | ||||||||||||  |||||||||||||    
T  13589147 aacgacccaatatttttgtatcatgtaacttgggatttgatatgatctctcactttcacctcca 13589084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 39946664 - 39946603
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgat 199  Q
    |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  39946664 tttcttatcgcacaaaacacctaaggctcttctccatttcaaccatccagcttgaatacgat 39946603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 6510891 - 6511059
Alignment:
Q  138 tttcttatcgca-caaaacacctgagactcttctccatttcaaccacccagcttgaatacgataattta-catctgcttctatttctccatcattttgta 235  Q
    ||||||||| || |||| ||| ||||||||||||||||||||||||| || ||||||| | || |||||  | ||||||| |||||||| ||| ||| ||    
T  6510891 tttcttatcacatcaaaccacatgagactcttctccatttcaaccactcaacttgaatgcaatgatttatgacctgcttccatttctccttcactttata 6510990  T
Q  236 ttatggacccaagatatttaaaccgtgtaacttgggtatgatatgatctccaactttcacctccaaggta 305  Q
     || ||| |||||||||||| ||| |||||||||||  | || |||||| |||| || ||||||||||||    
T  6510991 ctacggatccaagatatttataccatgtaacttggg-gttatgtgatcttcaacctttacctccaaggta 6511059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 45332039 - 45332117
Alignment:
Q  215 ctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaacttt 292  Q
    ||||||||||| | ||||||| |||| | ||| |||||||||||||||||||||| ||||||| |||||||||||||||    
T  45332039 ctatttctccaccgttttgtactatgaagccaggatatttaaaccgtgtaacttgtggtatgacatgatctccaacttt 45332117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 6986603 - 6986525
Alignment:
Q  164 ctcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatgga 242  Q
    ||||||| ||||||   ||| ||| |||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  6986603 ctcttcttcatttcggtcactcagattgaattcgataatttacatatgcttcgatttctctatcattttgtattatgga 6986525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 10824562 - 10824609
Alignment:
Q  137 ttttcttatcgcacaaaacacctgagactcttctccatttcaaccacc 184  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||    
T  10824562 ttttcgtatcacataaaacacctgagactcttctccatttcaaccacc 10824609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 35601598 - 35601501
Alignment:
Q  160 gagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaa 257  Q
    |||||| ||||||||||||| ||||| | |||||| ||||||||||||||| | ||| ||||| | || || |||| | | || ||||||||||||||    
T  35601598 gagactattctccatttcaatcacccggattgaattcgataatttacatctacgtctctttcttcgtcgttgtgtactttagatccaagatatttaaa 35601501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 43732230 - 43732279
Alignment:
Q  249 atatttaaaccgtgtaacttggg-tatgatatgatctccaactttcacct 297  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  43732230 atatttaaaccgtgttacttgtgctatgatatgatctccaactttcacct 43732279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 43732396 - 43732355
Alignment:
Q  153 aacacctgagactcttctccatttcaaccacccagcttgaat 194  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  43732396 aacacttgagactcttctccatttcaaccacccaacttgaat 43732355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 13172147 - 13172200
Alignment:
Q  164 ctcttctccatttcaaccacccagcttgaatacgataatttacatctgcttcta 217  Q
    |||||||| ||||||||||||| |||||||||| || ||| |||| ||||||||    
T  13172147 ctcttctctatttcaaccaccctgcttgaatacaatgattcacatttgcttcta 13172200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 298
Target Start/End: Complemental strand, 3285163 - 3285135
Alignment:
Q  270 ggtatgatatgatctccaactttcacctc 298  Q
    |||||||||||||||||||||||||||||    
T  3285163 ggtatgatatgatctccaactttcacctc 3285135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 138 - 345
Target Start/End: Original strand, 2745 - 2951
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||||      
T  2745 tttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgacttacatctgcttctatttcttcgtcattttgtacg 2844  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  |  ||||||||||  | ||||||||||    
T  2845 aaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaatgtaga--ctgacttctccttccgctgaagttaca 2942  T
Q  337 ttccatata 345  Q
    |||||||||    
T  2943 ttccatata 2951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 12073 - 12293
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| ||||  |||||||||||||||| ||||||||| ||||||||   |||||| ||||||||||||||| |||||||||| |    
T  12073 tttcttatcgcacaaaacacttgaggttcttctccatttcaacgacccagcttaaatacgatggcttacatatgcttctatttctccgtcattttgtact 12172  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||||||||||   ||||||||||||| ||||||||||    
T  12173 atggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcaccgcgaaggtagacc--tacttctccttttgctgaagttaca 12270  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    ||| |||||  ||||||| ||||    
T  12271 ttctatataatccgtcttacttc 12293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 31275 - 31055
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    ||||||| ||| ||||||||| ||||||||||      
T  31275 tttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatggcctacatctacttttatttctccgtcattttgtacg 31176  T
Q  238 atggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttaca 336  Q
    | ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||   ||||||||||  | ||||||||||    
T  31175 aaggacccaagatgtttaaaccgtgtaacttggggtatgatatgatctccaactttcacttccaaggtagacc--tacttctccttccgctgaagttaca 31078  T
Q  337 ttccatataccccgtcttgcttc 359  Q
    |||||||||| | ||||||||||    
T  31077 ttccatatactcagtcttgcttc 31055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 138 - 309
Target Start/End: Complemental strand, 82528 - 82356
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||||||||||||||| |||| |||||  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || |    
T  82528 tttcttatcgcacaaaacacatgaggctctttcccattgcaaccacccagcttgaatacgatgatttacatctgcttctatttctccgtcattttttact 82429  T
Q  238 atggacccaagatatttaaaccgtgtaacttg-ggtatgatatgatctccaactttcacctccaaggtagacc 309  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| |||||    
T  82428 atggacccaagatatttaaaccgtgtaacttgtggtatgatataatctccaactttcgcctccaaggcagacc 82356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 226 - 302
Target Start/End: Complemental strand, 5911 - 5834
Alignment:
Q  226 tcattttgtattatggacccaagatatttaaaccgtgtaactt-gggtatgatatgatctccaactttcacctccaag 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5911 tcattttgtattgtggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaag 5834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 60 - 156
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaacca--cccagcttgaatacgataatttacatctgcttctatttctccatcatttt 232  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||  ||| ||||| ||||||| |||||||| |||||||||||| || |||||||    
T  60 tttcttatcgcacaaaacacctgaggctcttctccatttcaaacaccccctgcttgcatacgatgatttacatatgcttctatttccccgtcatttt 156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 87084 - 87204
Alignment:
Q  138 tttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtatt 237  Q
    |||||||| ||| ||||| || ||| || |||||||||||||||| | | | |||||| ||| | ||||||||| ||||||||||||  |||||| || |    
T  87084 tttcttattgcataaaacccccgaggcttttctccatttcaaccatcaaacatgaatatgatgagttacatctgattctatttctccgacattttatact 87183  T
Q  238 atggacccaagatatttaaac 258  Q
    |||||||||||||||||||||    
T  87184 atggacccaagatatttaaac 87204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 88514 - 88618
Alignment:
Q  254 taaaccgtgtaacttgg-gtatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatataccccgtc 352  Q
    |||||| |||||||||  ||||| |||||| |||| |||||| |||||||||| ||| ||  ||||||||||| |||||||||||||||||||| | |||    
T  88514 taaaccatgtaacttgaagtatggtatgatttccatctttcatctccaaggtaaacctac--ttctccttttgctgaagttacattccatatactctgtc 88611  T
Q  353 ttgcttc 359  Q
    |||||||    
T  88612 ttgcttc 88618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 298
Target Start/End: Complemental strand, 9434 - 9303
Alignment:
Q  168 tctccatttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaact 267  Q
    ||||| ||||||| |||||| |||||| | ||  ||||||||| |||| |||||| |||| |||| || |||  ||| |||||||||||| |||||||||    
T  9434 tctccctttcaactacccagtttgaatcctatgttttacatctccttccatttcttcatcgttttataatataaacctaagatatttaaatcgtgtaact 9335  T
Q  268 -tgggtatgatatgatctccaactttcacctc 298  Q
         ||||||||||||||||||||| |||||    
T  9334 aataatatgatatgatctccaacttttacctc 9303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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