View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3219_high_62 (Length: 221)
Name: NF3219_high_62
Description: NF3219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3219_high_62 |
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Alignment Details
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 43062899 - 43062743
Alignment:
| Q |
28 |
cacagaccccattgatcatttccatacactgaccagattttataattgttggtttaacacctattaataataatatatccaaacatgcatgcataaaata |
127 |
Q |
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| T |
43062899 |
cacataccccattgatcatttccatacactgaccggattttataattgttggtttaacacctattaataata---tatccaaacatgcatgcataaaata |
43062803 |
T |
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| Q |
128 |
ttcatgtcataaccgcgtttgttccatggattctccaatgcatatccttcctatatatac |
187 |
Q |
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| T |
43062802 |
ttcatgtcataaccgcgtttgttccatggattctccaatgcatatccttcctatatatac |
43062743 |
T |
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