View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3221_low_3 (Length: 339)

Name: NF3221_low_3
Description: NF3221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3221_low_3
NF3221_low_3
[»] chr3 (25 HSPs)
chr3 (14-225)||(28241059-28241264)
chr3 (302-339)||(35368545-35368582)
chr3 (301-339)||(10441396-10441434)
chr3 (302-339)||(21969153-21969190)
chr3 (302-339)||(21991589-21991626)
chr3 (306-339)||(22176247-22176280)
chr3 (304-339)||(45487797-45487832)
chr3 (304-339)||(46679287-46679322)
chr3 (304-339)||(50099572-50099607)
chr3 (301-339)||(10441253-10441291)
chr3 (305-339)||(21969295-21969329)
chr3 (305-339)||(21991731-21991765)
chr3 (305-339)||(25488479-25488513)
chr3 (305-339)||(25561010-25561044)
chr3 (305-339)||(32237532-32237566)
chr3 (305-339)||(39850483-39850517)
chr3 (305-339)||(45487937-45487971)
chr3 (302-339)||(1476689-1476726)
chr3 (302-339)||(10017110-10017147)
chr3 (302-339)||(10254564-10254601)
chr3 (306-339)||(22101303-22101336)
chr3 (302-339)||(26976838-26976875)
chr3 (306-339)||(45712903-45712936)
chr3 (303-339)||(10117649-10117685)
chr3 (303-331)||(12789603-12789631)
[»] scaffold0069 (2 HSPs)
scaffold0069 (295-339)||(26394-26438)
scaffold0069 (303-331)||(26467-26495)
[»] chr5 (9 HSPs)
chr5 (303-339)||(33629342-33629378)
chr5 (304-335)||(13754289-13754320)
chr5 (300-331)||(15855837-15855868)
chr5 (304-339)||(20476569-20476604)
chr5 (297-331)||(35420603-35420637)
chr5 (306-339)||(21591213-21591246)
chr5 (306-339)||(21595330-21595363)
chr5 (303-339)||(17583377-17583413)
chr5 (303-331)||(35420758-35420786)
[»] chr4 (21 HSPs)
chr4 (300-339)||(13204515-13204554)
chr4 (296-339)||(32318710-32318753)
chr4 (300-339)||(55107662-55107701)
chr4 (297-339)||(4552776-4552818)
chr4 (306-339)||(55107524-55107557)
chr4 (303-339)||(4552923-4552959)
chr4 (295-339)||(24915783-24915827)
chr4 (303-339)||(52824236-52824272)
chr4 (304-339)||(530667-530702)
chr4 (304-339)||(1298910-1298945)
chr4 (300-331)||(42274486-42274517)
chr4 (305-339)||(1299050-1299084)
chr4 (304-334)||(4894967-4894997)
chr4 (305-339)||(18417795-18417829)
chr4 (305-339)||(27434609-27434643)
chr4 (306-339)||(530807-530840)
chr4 (306-339)||(24969682-24969715)
chr4 (302-331)||(43486196-43486225)
chr4 (307-339)||(18417658-18417690)
chr4 (303-339)||(20435278-20435314)
chr4 (303-331)||(23928565-23928593)
[»] chr1 (19 HSPs)
chr1 (304-339)||(19954909-19954944)
chr1 (302-339)||(42561433-42561470)
chr1 (302-339)||(49285113-49285150)
chr1 (303-339)||(50627269-50627305)
chr1 (295-331)||(51789586-51789622)
chr1 (304-339)||(5189467-5189502)
chr1 (300-339)||(9978045-9978084)
chr1 (305-339)||(19797119-19797153)
chr1 (305-339)||(27240923-27240957)
chr1 (305-339)||(40647256-40647290)
chr1 (306-339)||(27926251-27926284)
chr1 (302-339)||(47940566-47940603)
chr1 (303-331)||(2854529-2854557)
chr1 (295-331)||(2854678-2854714)
chr1 (307-339)||(9978190-9978222)
chr1 (303-339)||(15324623-15324659)
chr1 (303-331)||(23698499-23698527)
chr1 (303-331)||(47940717-47940745)
chr1 (303-331)||(51789741-51789769)
[»] chr8 (9 HSPs)
chr8 (297-339)||(15882191-15882233)
chr8 (297-339)||(35467308-35467350)
chr8 (303-339)||(15882339-15882375)
chr8 (300-339)||(24211272-24211311)
chr8 (304-339)||(38520156-38520191)
chr8 (305-339)||(8210322-8210356)
chr8 (306-339)||(24211416-24211449)
chr8 (302-339)||(33100783-33100820)
chr8 (307-339)||(37114239-37114271)
[»] chr2 (13 HSPs)
chr2 (305-339)||(6605737-6605771)
chr2 (302-339)||(24101828-24101865)
chr2 (303-339)||(29229358-29229394)
chr2 (303-339)||(29342658-29342694)
chr2 (300-339)||(1923974-1924013)
chr2 (304-339)||(7737203-7737238)
chr2 (304-339)||(16705731-16705766)
chr2 (305-339)||(34490594-34490628)
chr2 (302-339)||(6605872-6605909)
chr2 (306-339)||(34455885-34455918)
chr2 (306-339)||(45408763-45408796)
chr2 (295-339)||(9933707-9933751)
chr2 (303-339)||(42713916-42713952)
[»] scaffold0122 (2 HSPs)
scaffold0122 (302-339)||(45830-45867)
scaffold0122 (301-339)||(45972-46010)
[»] chr7 (16 HSPs)
chr7 (302-339)||(3953038-3953075)
chr7 (302-339)||(31231754-31231791)
chr7 (303-339)||(30594690-30594726)
chr7 (303-339)||(35339275-35339311)
chr7 (303-339)||(38528550-38528586)
chr7 (304-339)||(33721825-33721860)
chr7 (304-339)||(34052417-34052452)
chr7 (305-339)||(10936608-10936642)
chr7 (306-339)||(12142192-12142225)
chr7 (306-339)||(20184238-20184271)
chr7 (306-339)||(24836158-24836191)
chr7 (306-339)||(31231614-31231647)
chr7 (303-339)||(17101651-17101687)
chr7 (303-331)||(20184385-20184413)
chr7 (303-339)||(24836017-24836053)
chr7 (307-339)||(35665754-35665786)
[»] chr6 (10 HSPs)
chr6 (295-336)||(5416655-5416696)
chr6 (302-339)||(21380079-21380116)
chr6 (303-339)||(15546770-15546806)
chr6 (296-331)||(15546622-15546657)
chr6 (305-339)||(885384-885418)
chr6 (305-339)||(885523-885557)
chr6 (305-339)||(21379940-21379974)
chr6 (306-339)||(17367064-17367097)
chr6 (307-339)||(7808747-7808779)
chr6 (303-331)||(13439692-13439720)
[»] scaffold0107 (2 HSPs)
scaffold0107 (297-331)||(51054-51088)
scaffold0107 (303-331)||(51209-51237)
[»] scaffold0163 (1 HSPs)
scaffold0163 (306-339)||(2078-2111)


Alignment Details
Target: chr3 (Bit Score: 173; Significance: 5e-93; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 28241059 - 28241264
Alignment:
Q  14 gtggaggaggaatcggtgtcggtgggggaggaggatgaaagagagggtggtggttcggtgaggggttttggatcgagaaccatcgctgaggaacccatgg 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28241059 gtggaggaggaatcggtgtcggcgggggaggaggatgaaagagagggtggtggttcggtgagaggttttggatcgagaaccatcgctgaggaacccatgg 28241158  T
Q  114 ttgaagacggtgattagagaatttgggaattagggtttcggtgttgtgggatttagaatttgggattgggatcgcttttaggtgaagtatatgtaatgaa 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||      |||||||||||||||||||| ||||||    
T  28241159 ttgaagacggtgattagagaatttgggaattagggtttcggtgttgtgggatttggaatttgggatt------gcttttaggtgaagtatatggaatgaa 28241252  T
Q  214 gtgaggtgttac 225  Q
    ||||||||||||    
T  28241253 gtgaggtgttac 28241264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 35368545 - 35368582
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35368545 aaaaggagaaaacttaggtacaattccttatgtgcttt 35368582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 10441434 - 10441396
Alignment:
Q  301 aaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  10441434 aaaaaggagaaaacttaggtacaattccttaggtgcttt 10441396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 21969153 - 21969190
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  21969153 aaaaggagaaaacttaggtacaattccttaggtgcttt 21969190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 21991589 - 21991626
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  21991589 aaaaggagaaaacttaggtacaattccttaggtgcttt 21991626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 22176280 - 22176247
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||||||||    
T  22176280 ggagaaaacttaggtacaattccttatgtgcttt 22176247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 45487797 - 45487832
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  45487797 aaggagaaaacttaggtacaattccttaggtgcttt 45487832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 46679287 - 46679322
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  46679287 aaggagaaaacttaggtacaattccttaagtgcttt 46679322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 50099607 - 50099572
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  50099607 aaggagaaaacttaggtacaattccttaggtgcttt 50099572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 10441253 - 10441291
Alignment:
Q  301 aaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  10441253 aaaaaggagaaaacttaagtacaattccttaggtgcttt 10441291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 21969329 - 21969295
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  21969329 aggagaaaacttaggtacaattccttaggtgcttt 21969295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 21991765 - 21991731
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  21991765 aggagaaaacttaggtacaattccttaggtgcttt 21991731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 25488513 - 25488479
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  25488513 aggagaaaacttaggtacaattccttaggtgcttt 25488479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 25561010 - 25561044
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  25561010 aggagaaaacttaggtacaattccttaggtgcttt 25561044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 32237566 - 32237532
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  32237566 aggagaaaacttaggtacaattccttaggtgcttt 32237532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 39850517 - 39850483
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  39850517 aggagaaaacttaggtacaattccttaggtgcttt 39850483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 45487971 - 45487937
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  45487971 aggagaaaacttaggtacaattccttaggtgcttt 45487937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 1476726 - 1476689
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  1476726 aaaaggataaaacttaggtacaattccttaggtgcttt 1476689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 10017110 - 10017147
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  10017110 aaaaagagaaaacttaggtacaattccttaggtgcttt 10017147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 10254564 - 10254601
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  10254564 aaaaagagaaaacttaggtacaattccttaggtgcttt 10254601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 22101336 - 22101303
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||    
T  22101336 ggagaaaacttaggtacaattccttatgagcttt 22101303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 26976838 - 26976875
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  26976838 aaaaggagaaaacttaggtacaatttcttaggtgcttt 26976875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 45712903 - 45712936
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  45712903 ggagaaaacttaggtacaattccttaggtgcttt 45712936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 10117685 - 10117649
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  10117685 aaaggagaaaatttaggtacaattccttaggtgcttt 10117649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Original strand, 12789603 - 12789631
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  12789603 aaaggagaaaacttaggtacaattcctta 12789631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 26394 - 26438
Alignment:
Q  295 aatttaaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||| |||||||||||||||||||||||||||| |||||||    
T  26394 aatttaaataaggagaaaacttaggtacaattccttaggtgcttt 26438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Complemental strand, 26495 - 26467
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  26495 aaaggagaaaacttaggtacaattcctta 26467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 33629342 - 33629378
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||||||||||    
T  33629342 aaaggagaaaacttaggtacaattccttatgtgcttt 33629378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 335
Target Start/End: Original strand, 13754289 - 13754320
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtg 335  Q
    ||||||||||||||||||||||||||||||||    
T  13754289 aaggagaaaacttaggtacaattccttatgtg 13754320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 331
Target Start/End: Original strand, 15855837 - 15855868
Alignment:
Q  300 aaaaaaggagaaaacttaggtacaattcctta 331  Q
    ||||||||||||||||||||||||||||||||    
T  15855837 aaaaaaggagaaaacttaggtacaattcctta 15855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 20476604 - 20476569
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  20476604 aaggagaaaacttaggtacaattccttaggtgcttt 20476569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 35420603 - 35420637
Alignment:
Q  297 tttaaaaaaggagaaaacttaggtacaattcctta 331  Q
    |||| ||||||||||||||||||||||||||||||    
T  35420603 tttataaaaggagaaaacttaggtacaattcctta 35420637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 21591213 - 21591246
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  21591213 ggagaaaacttaggtacaattccttaagtgcttt 21591246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 21595330 - 21595363
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  21595330 ggagaaaacttaggtacaattccttaagtgcttt 21595363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 17583413 - 17583377
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||| |||| |||||||    
T  17583413 aaaggagaaaacttaggtacaatttcttaggtgcttt 17583377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Complemental strand, 35420786 - 35420758
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  35420786 aaaggagaaaacttaggtacaattcctta 35420758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 13204554 - 13204515
Alignment:
Q  300 aaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  13204554 aaaaaaggagaaaacttaggtacaattccttatgtacttt 13204515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 32318710 - 32318753
Alignment:
Q  296 atttaaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  32318710 atttaaaaatagagaaaacttaggtacaattccttatgtgcttt 32318753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 55107701 - 55107662
Alignment:
Q  300 aaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  55107701 aaaaaaggagaaaacttaggtacaattccttaggtgcttt 55107662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 4552776 - 4552818
Alignment:
Q  297 tttaaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  4552776 tttaataaaggagaaaacttaggtacaattccttaagtgcttt 4552818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 55107524 - 55107557
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||||||||    
T  55107524 ggagaaaacttaggtacaattccttatgtgcttt 55107557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 4552959 - 4552923
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| ||||||    
T  4552959 aaaggagaaaacttaggtacaattccttatatgcttt 4552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 24915783 - 24915827
Alignment:
Q  295 aatttaaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||    
T  24915783 aattaaaagaaggagaaaacttaggtacaattccttaggtgcttt 24915827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 52824236 - 52824272
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||| |||||||    
T  52824236 aaaggagaaaacttaggtacaattccttaggtgcttt 52824272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 530667 - 530702
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  530667 aaggagaaaacttaggtacaattccttaggtgcttt 530702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 1298910 - 1298945
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  1298910 aaggagaaaacttaggtacaattccttaggtgcttt 1298945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 331
Target Start/End: Original strand, 42274486 - 42274517
Alignment:
Q  300 aaaaaaggagaaaacttaggtacaattcctta 331  Q
    ||||||||||||||||||||||||||||||||    
T  42274486 aaaaaaggagaaaacttaggtacaattcctta 42274517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 1299084 - 1299050
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  1299084 aggagaaaacttaggtacaattccttaggtgcttt 1299050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 334
Target Start/End: Original strand, 4894967 - 4894997
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgt 334  Q
    |||||||||||||||||||||||||||||||    
T  4894967 aaggagaaaacttaggtacaattccttatgt 4894997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 18417829 - 18417795
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  18417829 aggagaaaacttaggtacaattccttaggtgcttt 18417795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 27434609 - 27434643
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||| ||||||||||||    
T  27434609 aggagaaaacttaggtacaatttcttatgtgcttt 27434643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 530840 - 530807
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  530840 ggagaaaacttaggtacaattccttaggtgcttt 530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 24969715 - 24969682
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  24969715 ggagaaaacttaggtacaattccttaggtgcttt 24969682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 331
Target Start/End: Original strand, 43486196 - 43486225
Alignment:
Q  302 aaaaggagaaaacttaggtacaattcctta 331  Q
    ||||||||||||||||||||||||||||||    
T  43486196 aaaaggagaaaacttaggtacaattcctta 43486225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 18417658 - 18417690
Alignment:
Q  307 gagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||| |||||||    
T  18417658 gagaaaacttaggtacaattccttaggtgcttt 18417690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 20435314 - 20435278
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  20435314 aaaggagaaaacttaggtacaattctttaggtgcttt 20435278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Original strand, 23928565 - 23928593
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  23928565 aaaggagaaaacttaggtacaattcctta 23928593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 19954909 - 19954944
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||||||||||    
T  19954909 aaggagaaaacttaggtacaattccttatgtgcttt 19954944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 42561470 - 42561433
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  42561470 aaaaggagaaaacttaggtacaattccttaggtgcttt 42561433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 49285150 - 49285113
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  49285150 aaaaggagaaaacttaggtacaattccttaggtgcttt 49285113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 50627305 - 50627269
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| ||||||    
T  50627305 aaaggagaaaacttaggtacaattccttatatgcttt 50627269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 51789586 - 51789622
Alignment:
Q  295 aatttaaaaaaggagaaaacttaggtacaattcctta 331  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51789586 aattttaaaaaggagaaaacttaggtacaattcctta 51789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 5189467 - 5189502
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  5189467 aaggagaaaacttaggtacaattccttaggtgcttt 5189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 9978045 - 9978084
Alignment:
Q  300 aaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  9978045 aaaaatggagaaaatttaggtacaattccttatgtgcttt 9978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 19797153 - 19797119
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  19797153 aggagaaaacttaggtacaattccttaggtgcttt 19797119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 27240923 - 27240957
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  27240923 aggagaaaacttaggtacaattccttaggtgcttt 27240957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 40647290 - 40647256
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  40647290 aggagaaaacttaggtacaattccttaggtgcttt 40647256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 27926251 - 27926284
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||| |||||||||||||||||    
T  27926251 ggagaaaacttaggtataattccttatgtgcttt 27926284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 47940566 - 47940603
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  47940566 aaaaggagaaaacttaggtacaatttcttaggtgcttt 47940603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Original strand, 2854529 - 2854557
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  2854529 aaaggagaaaacttaggtacaattcctta 2854557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 2854714 - 2854678
Alignment:
Q  295 aatttaaaaaaggagaaaacttaggtacaattcctta 331  Q
    ||||||| | |||||||||||||||||||||||||||    
T  2854714 aatttaatataggagaaaacttaggtacaattcctta 2854678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 9978222 - 9978190
Alignment:
Q  307 gagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||| |||||||    
T  9978222 gagaaaacttaggtacaattccttaggtgcttt 9978190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 15324623 - 15324659
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||| |||| |||||||    
T  15324623 aaaggagaaaacttaggtacaatttcttaggtgcttt 15324659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Original strand, 23698499 - 23698527
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  23698499 aaaggagaaaacttaggtacaattcctta 23698527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Complemental strand, 47940745 - 47940717
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  47940745 aaaggagaaaacttaggtacaattcctta 47940717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Complemental strand, 51789769 - 51789741
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  51789769 aaaggagaaaacttaggtacaattcctta 51789741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 15882191 - 15882233
Alignment:
Q  297 tttaaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  15882191 tttaataaaggagaaaacttaggtacaattccttaggtgcttt 15882233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 35467350 - 35467308
Alignment:
Q  297 tttaaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  35467350 tttaaaaaaggaaaaaacttacgtacaattccttatgtgcttt 35467308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 15882375 - 15882339
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15882375 aaaggagaaaacttaggtacaattccttaggtgcttt 15882339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 24211272 - 24211311
Alignment:
Q  300 aaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  24211272 aaaaaaggagaaaacttaggtacaattctttaggtgcttt 24211311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 38520191 - 38520156
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  38520191 aaggagaaaacttaggtacaattccttaagtgcttt 38520156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 8210322 - 8210356
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  8210322 aggagaaaacttaggtacaattccttaggtgcttt 8210356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 24211449 - 24211416
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  24211449 ggagaaaacttaggtacaattccttaggtgcttt 24211416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 33100820 - 33100783
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  33100820 aaaaagagaaaacttaggtacaatttcttatgtgcttt 33100783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 37114239 - 37114271
Alignment:
Q  307 gagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||| |||||||    
T  37114239 gagaaaacttaggtacaattccttaggtgcttt 37114271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 6605737 - 6605771
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||||||||    
T  6605737 aggagaaaacttaggtacaattccttatgtgcttt 6605771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 24101828 - 24101865
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  24101828 aaaaggagaaaacttaggtacaattccttaggtgcttt 24101865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 29229358 - 29229394
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29229358 aaaggagaaaacttaggtacaattacttatgtgcttt 29229394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 29342658 - 29342694
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29342658 aaaggagaaaacttaggtacaattacttatgtgcttt 29342694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 1923974 - 1924013
Alignment:
Q  300 aaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  1923974 aaaaaaggagaaaacttaggtacaatttcttaggtgcttt 1924013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 7737238 - 7737203
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  7737238 aaggagaaaacttaggtacaattccttaggtgcttt 7737203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 16705731 - 16705766
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  16705731 aaggagaaaacttaggtacaattccttaggtgcttt 16705766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 34490628 - 34490594
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  34490628 aggagaaaacttaggtacaattccttaggtgcttt 34490594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 6605909 - 6605872
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  6605909 aaaaggagaaaacttaggtacaattctttaggtgcttt 6605872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 34455885 - 34455918
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  34455885 ggagaaaacttaggtacaattccttaggtgcttt 34455918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 45408796 - 45408763
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  45408796 ggagaaaacttaggtacaattccttaggtgcttt 45408763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 9933751 - 9933707
Alignment:
Q  295 aatttaaaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||| ||||||||||||| |||||||||||| |||| |||||||    
T  9933751 aattttaaaaaggagaaaatttaggtacaatttcttaggtgcttt 9933707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 42713952 - 42713916
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||| |||| |||||||    
T  42713952 aaaggagaaaacttaggtacaatttcttaagtgcttt 42713916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 45830 - 45867
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  45830 aaaaggagaaaacttaggtacaattccttaggtgcttt 45867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 46010 - 45972
Alignment:
Q  301 aaaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  46010 aaaatggagaaaacttaggtacaattccttaggtgcttt 45972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 3953038 - 3953075
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3953038 aaaaggagaaaacttaggtacaattccttatgtacttt 3953075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 31231791 - 31231754
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  31231791 aaaaggagaaaacttaggtacaattccttaggtgcttt 31231754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 30594690 - 30594726
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||| |||||||    
T  30594690 aaaggagaaaacttaggtacaattccttaggtgcttt 30594726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 35339275 - 35339311
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||| |||||||    
T  35339275 aaaggagaaaacttaggtacaattccttaggtgcttt 35339311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 38528586 - 38528550
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38528586 aaaggagaaaacttaggtacaattccttaggtgcttt 38528550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 33721825 - 33721860
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  33721825 aaggagaaaacttaggtacaattccttaggtgcttt 33721860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 34052452 - 34052417
Alignment:
Q  304 aaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||| |||||||    
T  34052452 aaggagaaaacttaggtacaattccttaggtgcttt 34052417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 10936642 - 10936608
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  10936642 aggagaaaacttaggtacaattccttaggtgcttt 10936608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 12142192 - 12142225
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  12142192 ggagaaaacttaggtacaattccttacgtgcttt 12142225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 20184238 - 20184271
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  20184238 ggagaaaacttaggtacaattccttaggtgcttt 20184271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 24836191 - 24836158
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  24836191 ggagaaaacttaggtacaattccttaggtgcttt 24836158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 31231614 - 31231647
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  31231614 ggagaaaacttaggtacaattccttaggtgcttt 31231647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 17101651 - 17101687
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||| |||| |||||||    
T  17101651 aaaggagaaaacttaggtacaatttcttaggtgcttt 17101687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Complemental strand, 20184413 - 20184385
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  20184413 aaaggagaaaacttaggtacaattcctta 20184385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 24836017 - 24836053
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||| |||| |||||||    
T  24836017 aaaggagaaaacttaggtacaattgcttaggtgcttt 24836053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 35665786 - 35665754
Alignment:
Q  307 gagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||| |||||||    
T  35665786 gagaaaacttaggtacaattccttaggtgcttt 35665754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 5416696 - 5416655
Alignment:
Q  295 aatttaaaaaaggagaaaacttaggtacaattccttatgtgc 336  Q
    |||| |||||||||||||||||||||||||||||||| ||||    
T  5416696 aattaaaaaaaggagaaaacttaggtacaattccttaggtgc 5416655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 21380116 - 21380079
Alignment:
Q  302 aaaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||||||| |||||||    
T  21380116 aaaaggagaaaacttaggtacaattccttaggtgcttt 21380079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 15546806 - 15546770
Alignment:
Q  303 aaaggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15546806 aaaggagaaaacttaggtacaattccttaggtgcttt 15546770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 15546622 - 15546657
Alignment:
Q  296 atttaaaaaaggagaaaacttaggtacaattcctta 331  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15546622 atttataaaaggagaaaacttaggtacaattcctta 15546657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 885384 - 885418
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  885384 aggagaaaacttaggtacaattccttaggtgcttt 885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 885557 - 885523
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  885557 aggagaaaacttaggtacaattccttaggtgcttt 885523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 21379940 - 21379974
Alignment:
Q  305 aggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  21379940 aggagaaaacttaggtacaattccttaggtgcttt 21379974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 17367064 - 17367097
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||||||| ||||    
T  17367064 ggagaaaacttaggtacaattccttatgttcttt 17367097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 7808779 - 7808747
Alignment:
Q  307 gagaaaacttaggtacaattccttatgtgcttt 339  Q
    ||||||||||||||||||||||||| |||||||    
T  7808779 gagaaaacttaggtacaattccttaggtgcttt 7808747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Original strand, 13439692 - 13439720
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  13439692 aaaggagaaaacttaggtacaattcctta 13439720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 51054 - 51088
Alignment:
Q  297 tttaaaaaaggagaaaacttaggtacaattcctta 331  Q
    |||| ||||||||||||||||||||||||||||||    
T  51054 tttagaaaaggagaaaacttaggtacaattcctta 51088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Complemental strand, 51237 - 51209
Alignment:
Q  303 aaaggagaaaacttaggtacaattcctta 331  Q
    |||||||||||||||||||||||||||||    
T  51237 aaaggagaaaacttaggtacaattcctta 51209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 2111 - 2078
Alignment:
Q  306 ggagaaaacttaggtacaattccttatgtgcttt 339  Q
    |||||||||||||||||||||||||| |||||||    
T  2111 ggagaaaacttaggtacaattccttaggtgcttt 2078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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