View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3223_high_71 (Length: 317)
Name: NF3223_high_71
Description: NF3223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3223_high_71 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 51 - 293
Target Start/End: Original strand, 8695234 - 8695476
Alignment:
| Q |
51 |
ggtgatcagtaataattgacatggggagcctaacaaattaccaaaacaaggcaaaccacgcattataatttgactaagaaatattctgnnnnnnnnnagg |
150 |
Q |
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| T |
8695234 |
ggtgatcagtaataattgacttggggagcctaacaaattaccaaaacaaggcaaaccacgcattataatttgactaagaaatattctgttttttttaagg |
8695333 |
T |
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| Q |
151 |
aaaagacgaagcaaataattgacgtgcctgaccaaagatgaaactttgggatcacgaataagtaattaataattatagtgagaaataatgtcttcgaaat |
250 |
Q |
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| T |
8695334 |
aaaagacgaagcaaataattgacgtgcctgaccaaagatgaaactttgggatcacgaataagtaattaataattatagtgagaaataatgtcttcgaaat |
8695433 |
T |
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| Q |
251 |
cttgaactagaataaataatgaactcatgagatatcgaaggtt |
293 |
Q |
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| T |
8695434 |
cttaaactagaataaataatgaactcatgagatatcgaaggtt |
8695476 |
T |
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