View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3223_low_148 (Length: 231)
Name: NF3223_low_148
Description: NF3223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3223_low_148 |
 | |
|
| [»] scaffold0349 (2 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold1254 (1 HSPs) |
| | |
|
| [»] scaffold0038 (4 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 60)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 10 - 219
Target Start/End: Original strand, 27604760 - 27604969
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27604760 |
aatgaatgatgtgaacaagttcatccaaacaaaaggaagaagaggcatatttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
27604859 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgtatagctttcacgtaaca |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| |||||| |||||||||| || || | |||| | |
|
|
| T |
27604860 |
aagtgctggtgtgatttcatctcctcttcgaagatcattttcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagattgccggtaaaa |
27604959 |
T |
|
| Q |
210 |
ccgtatcgag |
219 |
Q |
| |
|
|||||||||| |
|
|
| T |
27604960 |
ccgtatcgag |
27604969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 27611059 - 27611240
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
27611059 |
tgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgagga |
27611158 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
27611159 |
gtgatggtgtgatttcatctcctcttggaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgta |
27611240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 27718436 - 27718617
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
27718436 |
tgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgagga |
27718535 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
27718536 |
gtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgta |
27718617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 27724902 - 27725083
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
27724902 |
tgaattatgtggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgagga |
27725001 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
27725002 |
gtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgta |
27725083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 27698551 - 27698732
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
27698551 |
tgaattatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttgagagaaaacacaggaataaaaatcctagattcatcaatggccttgagga |
27698650 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
27698651 |
gtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgta |
27698732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 27593075 - 27593258
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||| |
|
|
| T |
27593075 |
aatgaatgatgtggtcaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgag |
27593174 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||||| |||||||||||||| ||||||| ||||| ||||||||||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
27593175 |
aagtgatggtgtgatttcatttcctctttgaagaccattgtcatcaatgaaggtgttgattcccttgtcagtaagagccttgta |
27593258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 27679076 - 27678895
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
27679076 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaa |
27678977 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||||||||||||||||||||| ||||| |||| | |||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
27678976 |
gtgatggtgtgatttcatctcctctttgaagaccattcttatcaatgaaggtgttgattcccttgtcagtaagagccttgta |
27678895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 219
Target Start/End: Complemental strand, 26802574 - 26802365
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| |
|
|
| T |
26802574 |
aatgaataatgtgaacaagttcgtccaagcaaaattttgaagaggcatagttgatagaaaacacaggaataaaaattctagattcttcaatggccttgat |
26802475 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgtatagctttcacgtaaca |
209 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| || |||||||||| || || | ||||| | |
|
|
| T |
26802474 |
gagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcaataagagccttgtagagattgcccgtaaaa |
26802375 |
T |
|
| Q |
210 |
ccgtatcgag |
219 |
Q |
| |
|
||||| |||| |
|
|
| T |
26802374 |
ccgtaccgag |
26802365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 28781271 - 28781088
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
28781271 |
aatgaataatgtgaacaagttcgtccaagcaaaattttgaagtggcatagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgag |
28781172 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
28781171 |
gagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgta |
28781088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 26646611 - 26646428
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
26646611 |
aatgaatgatgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgat |
26646512 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||| |||||||||||| | || |||||||| |||||| |||||||||| |
|
|
| T |
26646511 |
gagtgatggtgtgatttcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgta |
26646428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 26656121 - 26655938
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | |||||||||||||||||||| ||||||||||| | |
|
|
| T |
26656121 |
aatgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaac |
26656022 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| || |||||||||| |
|
|
| T |
26656021 |
gagtgatggtgtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgta |
26655938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 26752579 - 26752396
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
26752579 |
aatgaatgatgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgat |
26752480 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||| |||||||||||| | || |||||||| |||||| |||||||||| |
|
|
| T |
26752479 |
gagtgatggtgtgatttcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgta |
26752396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 26762092 - 26761909
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | |||||||||||||||||||| ||||||||||| | |
|
|
| T |
26762092 |
aatgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaac |
26761993 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| || |||||||||| |
|
|
| T |
26761992 |
gagtgatggtgtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgta |
26761909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 28786410 - 28786227
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| || | ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
28786410 |
aatgaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgag |
28786311 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
28786310 |
gagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgta |
28786227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 28792531 - 28792348
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| || | ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
28792531 |
aatgaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgag |
28792432 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
28792431 |
gagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgta |
28792348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 27677671 - 27677852
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || || |||||||||||||||| |
|
|
| T |
27677671 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacagcaataaaaatcctagactcttcaatggccttgagaa |
27677770 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| ||||||||||||||| |||||| |||| |||| | ||||||||| | ||||||||||| ||| | |||||||||| |
|
|
| T |
27677771 |
gtgatggtgtgatttcatcccctctttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaagagccttgta |
27677852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 27531252 - 27531435
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||| |||||||| |||||||| |||||| || |||||||||||||| |||| |||||||| || |
|
|
| T |
27531252 |
aatgagtgatgtgaacaagttcgtccaaacaaaatgaagaagatgcatagttttcagaaaatacgggaataaaaatcctagatttttcaatggcattttt |
27531351 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||| |||||||||| |
|
|
| T |
27531352 |
tagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatagattcccttgtcagtaagagccttgta |
27531435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 27706459 - 27706622
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
27706459 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggtgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaa |
27706558 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
||| ||||||||||||||| | |||| |||| |||| | ||||||||| | ||||||||||| |
|
|
| T |
27706559 |
gtgatggtgtgatttcatcccttctttgaagttcatgattgtcaatgaaggtgtggattccctt |
27706622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 25579849 - 25579686
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | |||||||||||||| ||||| ||||||||||||| || |
|
|
| T |
25579849 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaa |
25579750 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||| ||||||| |||| || | |||||||| |
|
|
| T |
25579749 |
gtgatggtgtgatttcatctcctctttgaagatcattatcatcaaagaaggtacgaattccctt |
25579686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 193
Target Start/End: Complemental strand, 27229339 - 27229181
Alignment:
| Q |
35 |
caaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctcct |
134 |
Q |
| |
|
||||||||| |||||||| ||||||||| |||||| | ||||||||||||| ||||| ||||||||||||| |||| |||||||||||| |||||| |
|
|
| T |
27229339 |
caaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatccgagattcgtcaatggccttgacgagtgatggtgtgatttcgtctcct |
27229240 |
T |
|
| Q |
135 |
cttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
27229239 |
ctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgta |
27229181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 31284418 - 31284237
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||| || ||||||||||| || || |||||||| ||| | |
|
|
| T |
31284418 |
tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcga |
31284319 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| ||||||||||||||| |||||| |||| ||| | |||||||||||| | ||||||||||| |||||| |||||||||| |
|
|
| T |
31284318 |
gtgatggtgtgatttcatcccctctttgaagttcactatcatcaatgaaggtgtggattcccttgtcagtaagagccttgta |
31284237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 25481872 - 25481724
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | |||||| ||||||| ||||| ||||||||||||| || |
|
|
| T |
25481872 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaatacaaatcctagattcttcaatggccttgacaa |
25481773 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaa |
160 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
25481772 |
gtgatggtgtgatttcatctcctctttgaagatcattttcatcaatgaa |
25481724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 26142995 - 26142847
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | |||||||||||||| ||||| ||||||||||||| || |
|
|
| T |
26142995 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaa |
26142896 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaa |
160 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
26142895 |
gtgatggtgtgatttcatctcctctttcaagatcattatcatcaatgaa |
26142847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 26056056 - 26055908
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | ||||||||||||| ||||| || |||||||||| || |
|
|
| T |
26056056 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaa |
26055957 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaa |
160 |
Q |
| |
|
||| || ||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
26055956 |
gtgatgatgtgatttcatctcctctttgaagatcattttcatcaatgaa |
26055908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 26076026 - 26075878
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | ||||||||||||| ||||| || |||||||||| || |
|
|
| T |
26076026 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaa |
26075927 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaa |
160 |
Q |
| |
|
||| || ||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
26075926 |
gtgatgatgtgatttcatctcctctttgaagatcattttcatcaatgaa |
26075878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 26884287 - 26884112
Alignment:
| Q |
18 |
atgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctg |
117 |
Q |
| |
|
||||| |||||||| ||||||||||| |||||||| ||||||||| ||||||| | ||||||||||| || ||||| ||||||||||||| |||| || |
|
|
| T |
26884287 |
atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg |
26884188 |
T |
|
| Q |
118 |
gtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||||||||| ||||||| |||||| ||| |||||||||||| | ||||||||||| | |||| |||||||||| |
|
|
| T |
26884187 |
gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgta |
26884112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 26623106 - 26622925
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||| || || || || || ||| || |
|
|
| T |
26623106 |
tgaatgatgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaa |
26623007 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||| ||||||| || |||||| |||| ||| |||||||||||| | ||||||||||| |||||| |||||||||| |
|
|
| T |
26623006 |
gtgatggtttgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgta |
26622925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 26729084 - 26728903
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||| || || || || || ||| || |
|
|
| T |
26729084 |
tgaatgatgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaa |
26728985 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||| ||||||| || |||||| |||| ||| |||||||||||| | ||||||||||| |||||| |||||||||| |
|
|
| T |
26728984 |
gtgatggtttgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgta |
26728903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 27338122 - 27338303
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| | ||||| |||||||| || || ||||||||||||| || |
|
|
| T |
27338122 |
tgaatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaa |
27338221 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| ||||||| |||||||||||||| |||||| ||||||||||||||| | | ||||||||| ||| || |||||||||| |
|
|
| T |
27338222 |
gtgatggtgtgctttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgta |
27338303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 27398862 - 27399043
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| |||||||| |||||| | ||||| |||||||| || || ||||||||||||| || |
|
|
| T |
27398862 |
tgaatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaa |
27398961 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| ||||||| |||||||||||||| |||||| ||||||||||||||| | | ||||||||| ||| || |||||||||| |
|
|
| T |
27398962 |
gtgatggtgtgctttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgta |
27399043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 28234692 - 28234531
Alignment:
| Q |
14 |
aatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagt |
113 |
Q |
| |
|
||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| || || ||||||||||||| |||| |
|
|
| T |
28234692 |
aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagt |
28234593 |
T |
|
| Q |
114 |
gctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
| |||||| ||||||||||||| | |||| || |||||||||||||| | ||||||||||| |
|
|
| T |
28234592 |
gatggtgttatttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattccctt |
28234531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 26048975 - 26048827
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | |||||||||||||| ||||| || |||||||||| || |
|
|
| T |
26048975 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaa |
26048876 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaa |
160 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
26048875 |
gtttgggtgtgatttcatctcctctttcaagatcattatcatcaatgaa |
26048827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 26070144 - 26069996
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||| | |||||||||||||| ||||| || |||||||||| || |
|
|
| T |
26070144 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaa |
26070045 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaa |
160 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
26070044 |
gtttgggtgtgatttcatctcctctttcaagatcattatcatcaatgaa |
26069996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 25538670 - 25538522
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| |||||||| ||||||||| |||||| | ||||||||||| || ||||| || |||||||||| || |
|
|
| T |
25538670 |
tgaatgatctggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaattctagattcttcgatggccttgacaa |
25538571 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaa |
160 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||| ||||| ||||| |
|
|
| T |
25538570 |
gtgatggtgtgatttcatctcctctttcaagatcattatcatctatgaa |
25538522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 26823969 - 26823879
Alignment:
| Q |
13 |
gaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggc |
103 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| || || |||||||| |
|
|
| T |
26823969 |
gaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttggcagaaaacacaggaataaaaatcctagactcttcaatggc |
26823879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 28139669 - 28139580
Alignment:
| Q |
14 |
aatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggc |
103 |
Q |
| |
|
||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||| |||||||| |
|
|
| T |
28139669 |
aatgatgtggacaagttcgtccaagcaaaacgaagaagaggcatagttgatggaaaacacagggatgaaaatcctagattcttcaatggc |
28139580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 28227082 - 28226957
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| ||||| |||||| |||||| |
|
|
| T |
28227082 |
aatgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaa |
28226983 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctc |
135 |
Q |
| |
|
||||| || ||| |||||||| |||| |
|
|
| T |
28226982 |
aagtgatgatgttatttcatcacctc |
28226957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 28242934 - 28242785
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| || || ||||||||||||| || |
|
|
| T |
28242934 |
tgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaa |
28242835 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
||| |||||| |||| || |||| | |||| || |||||||||||||| |
|
|
| T |
28242834 |
gtgatggtgttattttgtcacctcctggaagttctctgtcatcaatgaag |
28242785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 28325611 - 28325462
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||| || | |||||| |||||||| || || ||||||||||||| || |
|
|
| T |
28325611 |
tgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggccttgaaaa |
28325512 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
||| ||||| ||||| || |||| | |||| || ||||||||||||||| |
|
|
| T |
28325511 |
gtgacggtgttatttcgtcacctcgttgaaggtctttgtcatcaatgaag |
28325462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 26341989 - 26342105
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| || || | ||||| ||||||||||| || |||||||| |||| |
|
|
| T |
26341989 |
aatgaatgatgtggacaagttcgtccaaacaaaacgaagaagaagcatagttgattgagaaaattggaatgaaaatcctggactcttcaatggctttgac |
26342088 |
T |
|
| Q |
110 |
aagtgctggtgtgattt |
126 |
Q |
| |
|
||||| | ||||||||| |
|
|
| T |
26342089 |
aagtgattgtgtgattt |
26342105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 26861744 - 26861565
Alignment:
| Q |
14 |
aatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagt |
113 |
Q |
| |
|
|||||| || |||||||||||||||||||| || ||||||||||||||| ||||||||||||||| ||||| || || || |||||||| ||| ||| |
|
|
| T |
26861744 |
aatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagt |
26861645 |
T |
|
| Q |
114 |
gctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
| | | |||||||||| |||||| |||| ||| ||||| |||||| | || |||||||| |||||| |||||||||| |
|
|
| T |
26861644 |
gatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgta |
26861565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 25506975 - 25507091
Alignment:
| Q |
21 |
tgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtg |
120 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||| || |||||||||||||| ||||| |||||||| ||| | || ||||| |
|
|
| T |
25506975 |
tgaacaagttcctccaaacaaaattttgaagaggcatagttgatagaaagaaccggaataaaaatcctagattcttcaatggcgatgacgactgatggtg |
25507074 |
T |
|
| Q |
121 |
tgatttcatctcctctt |
137 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
25507075 |
tgatttcatctcctctt |
25507091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 26937219 - 26937075
Alignment:
| Q |
17 |
gatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgct |
116 |
Q |
| |
|
|||||| |||||||| ||||||||||| ||||||| ||||||||||||||| || ||||| || ||||| ||| || ||||| ||||||| ||||| | |
|
|
| T |
26937219 |
gatgtggacaagttcgtccaaacaaaatgaagaagtggcatagttgatagagaatacaggtatggcaatcccggaatcttcaattgccttgacaagtgat |
26937120 |
T |
|
| Q |
117 |
ggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
||||||||||| ||||||| | || || ||||||||||||||| |
|
|
| T |
26937119 |
ggtgtgatttcttctcctccatggagctccttgtcatcaatgaag |
26937075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 28150067 - 28149953
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||| |||||||| | |||||||||||| || | ||||| ||||||||||| || |||||||||||||| | |
|
|
| T |
28150067 |
tgaataatgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgatagagaagattggaatgaaaatcctggactcttcaatggccttgag-a |
28149969 |
T |
|
| Q |
112 |
gtgctggtgtgatttc |
127 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
28149968 |
gtgatggtgtgatttc |
28149953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 28181244 - 28181081
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || || ||||| |||||||| || || ||||||||||||| || |
|
|
| T |
28181244 |
tgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggccttgaaaa |
28181145 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
||| || ||| ||||| || |||| | |||| || ||||||| |||||| | |||||||||| |
|
|
| T |
28181144 |
gtgatgatgttatttcttcacctccttgaagctctctgtcatccatgaaggttcggattccctt |
28181081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 28098426 - 28098539
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||| || || ||||| ||||||||||| || || |||||||||| || |
|
|
| T |
28098426 |
tgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcatagttcttagagaagaccggaattaaaatcctggactcttcgatggccttgacaa |
28098525 |
T |
|
| Q |
112 |
gtgctggtgtgatt |
125 |
Q |
| |
|
| | | |||||||| |
|
|
| T |
28098526 |
gggattgtgtgatt |
28098539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 28185494 - 28185333
Alignment:
| Q |
14 |
aatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagt |
113 |
Q |
| |
|
||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || || ||||| |||||||| || || ||||||||||||| |||| |
|
|
| T |
28185494 |
aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggccttgaaaagt |
28185395 |
T |
|
| Q |
114 |
gctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
| || ||| ||||| || |||| | |||| || ||||||| |||||| | |||||||||| |
|
|
| T |
28185394 |
gatgatgttatttcttcacctccttgaagctctctgtcatccatgaaggttcggattccctt |
28185333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 26848792 - 26848641
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||| || ||| |||| ||||||| || || |||||| |||||| |
|
|
| T |
26848792 |
aatgaatgatgtggacaagttcgtccaaacaaaacgaagaagtggcatagttctcagagaatacaagaatggaaatcctcgagtcttcaatgttcttgag |
26848693 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
|| | |||||||| ||||| || || ||||||| ||||||||||||||| |
|
|
| T |
26848692 |
gagcgaaggtgtgatctcatcaccactctgaagatccttgtcatcaatgaag |
26848641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 28297770 - 28297919
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| ||||| ||| |||| || |||||||| |||||||| | || |||||| ||||| || |
|
|
| T |
28297770 |
tgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatgtgcttgaaaa |
28297869 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
||| |||||| ||||| || |||| | ||| || |||||||||||||| |
|
|
| T |
28297870 |
gtgatggtgttatttcgtcacctcctttaagctctctgtcatcaatgaag |
28297919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 28514303 - 28514154
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| ||||| ||| |||| || |||||||| |||||||| | || |||||| ||||| || |
|
|
| T |
28514303 |
tgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatgtgcttgaaaa |
28514204 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
||| |||||| ||||| || |||| | ||| || |||||||||||||| |
|
|
| T |
28514203 |
gtgatggtgttatttcgtcacctcctttaagctctctgtcatcaatgaag |
28514154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 26959300 - 26959250
Alignment:
| Q |
8 |
gaaatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcata |
58 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
26959300 |
gaaatgaatgatgtggacaagttcatccaaataaaacgaagaagaagcata |
26959250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 29826145 - 29826008
Alignment:
| Q |
24 |
acaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtga |
123 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||| ||| |||| || | |||||| ||||| ||||| | ||| ||||| | ||||| ||||||| |
|
|
| T |
29826145 |
acaagttcatctaagcaaaacgaagaagaagcataattggtagagaaaataggaatggctatcctagattcttgaattgccttcacaagtgagggtgtga |
29826046 |
T |
|
| Q |
124 |
tttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
|||| || |||||| |||| || ||||||||||||||| |
|
|
| T |
29826045 |
tttcgtcccctctttgaagctctttgtcatcaatgaag |
29826008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 26635822 - 26635774
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcata |
58 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
26635822 |
aatgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata |
26635774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 26741788 - 26741740
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcata |
58 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
26741788 |
aatgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata |
26741740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 2184417 - 2184302
Alignment:
| Q |
13 |
gaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaag |
112 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| |||||||| |||||||| | || || ||||| || ||||| ||||| || |||||||| || | ||| |
|
|
| T |
2184417 |
gaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagttctttgagaaaacagggatgaaaattctggactcttcaatggctttcataag |
2184318 |
T |
|
| Q |
113 |
tgctggtgtgatttca |
128 |
Q |
| |
|
|| || ||| |||||| |
|
|
| T |
2184317 |
tgatgctgttatttca |
2184302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 26975184 - 26975134
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt |
60 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
26975184 |
aatgaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagt |
26975134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 27427663 - 27427751
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaat |
100 |
Q |
| |
|
||||||||||| |||||| ||||||||| | |||||||| ||||||||| |||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
27427663 |
tgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat |
27427751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 27665172 - 27665352
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||| ||||||| |||||||| |||| || | | ||| |||||| ||||| |||||| ||| | |
|
|
| T |
27665172 |
aatgaatgatgtggacaagttcatctaaacaaaatgaagaagtagcatagttcttagagaatataataatggcaatcctcgattcttcaatgctcttccg |
27665271 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagcctt |
190 |
Q |
| |
|
|||| ||||||||||| || || || |||| || ||||||||||||||| | |||||||| || |||| | ||||||| |
|
|
| T |
27665272 |
gagtgaaggtgtgatttcgtcaccagttggaagctccttgtcatcaatgaaggtgtggattcctttgtcagaaagagcctt |
27665352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 2185027 - 2184912
Alignment:
| Q |
13 |
gaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaag |
112 |
Q |
| |
|
||||||| || |||||||| ||||||||||| |||||||| ||||||| | || || ||||| || ||||| |||||||| |||||||| || | ||| |
|
|
| T |
2185027 |
gaatgatatggacaagttcgtccaaacaaaatgaagaagaagcatagtcctttgagaaaacagggatgaaaattctggattcttcaatggctttcacaag |
2184928 |
T |
|
| Q |
113 |
tgctggtgtgatttca |
128 |
Q |
| |
|
| |||||| |||||| |
|
|
| T |
2184927 |
cgatggtgttatttca |
2184912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 25071789 - 25071741
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt |
60 |
Q |
| |
|
||||||||||| |||||||| || |||||||| |||||||| ||||||| |
|
|
| T |
25071789 |
tgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt |
25071741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 3478 - 3660
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatag-ttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgaga |
110 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3478 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgagg |
3577 |
T |
|
| Q |
111 |
agtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
3578 |
agtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgta |
3660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 14413 - 14593
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
14413 |
tgaattatgtggacaagttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgagga |
14511 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
14512 |
gtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgta |
14593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 4728 - 4909
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||| | | |
|
|
| T |
4728 |
tgaattatgtggacaagttcgtccaaacaaaacgaagaaaaggcatagaagatagaaaacacaggaataaaaatcctagattcatcaatggccttgcgga |
4827 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
| | |||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
4828 |
gggatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgta |
4909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 13687 - 13870
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| |||| ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
13687 |
aatgaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgag |
13786 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
13787 |
gagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgta |
13870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 7657 - 7474
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| |||| ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
7657 |
aatgaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgag |
7558 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
7557 |
gagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgta |
7474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1254 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold1254
Description:
Target: scaffold1254; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 10 - 155
Alignment:
| Q |
48 |
gaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctcctcttcgaagatcat |
147 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
10 |
gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat |
109 |
T |
|
| Q |
148 |
tgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||||||||||||| | | ||||||||| |||||| |||||||||| |
|
|
| T |
110 |
tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgta |
155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 268401 - 268582
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || |||||||| ||| | |
|
|
| T |
268401 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcga |
268500 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||| |||||||||| |||||| |||| ||| |||||||||||| | ||||||||||| |||||| |||||||||| |
|
|
| T |
268501 |
gtgatggtttgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgta |
268582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 28127723 - 28127837
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||| || ||||| ||||||||||| | || |
|
|
| T |
28127723 |
tgaatgatgtgcacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaatacaggaataaaaattctagattcttcaatggcctttaaaa |
28127822 |
T |
|
| Q |
112 |
gtgctggtgtgattt |
126 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
28127823 |
gtgacggtgtgattt |
28127837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 28164406 - 28164554
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | |||| ||||||||||||| | |
|
|
| T |
28164406 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagataacacaggaataaaaattcaagatttttcaatggccttgatga |
28164505 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaa |
160 |
Q |
| |
|
|| ||||||||||| |||||||| ||||||| ||||||||||| |
|
|
| T |
28164506 |
atgacggtgtgatttcttctcctctctcaagatcacaatcatcaatgaa |
28164554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 18679611 - 18679792
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| || || |||||||| ||| | |
|
|
| T |
18679611 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcga |
18679710 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||| |||||||||| |||||| | || ||| ||||||||||||| | |||||||| || |||||| |||||||||| |
|
|
| T |
18679711 |
gtgatggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcctttgtcagtaagagccttgta |
18679792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 18699444 - 18699625
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| || || |||||||| ||| | |
|
|
| T |
18699444 |
tgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcga |
18699543 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||| |||||||||| || ||| | || ||| ||||||||||||| | ||||||||||| |||||| |||| ||||| |
|
|
| T |
18699544 |
gtgatggtttgatttcatccccactttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgta |
18699625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 18724132 - 18724310
Alignment:
| Q |
15 |
atgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtg |
114 |
Q |
| |
|
|||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| || ||||| || || |||||||| ||| |||| |
|
|
| T |
18724132 |
atgatgtggacaagttcgttcaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtg |
18724231 |
T |
|
| Q |
115 |
ctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
|||| |||||||||| |||||| | || ||| ||||||||||||| | ||||||||||| |||||| |||||||||| |
|
|
| T |
18724232 |
atggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagccttgta |
18724310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 18731551 - 18731723
Alignment:
| Q |
15 |
atgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtg |
114 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| || || |||||||| ||| |||| |
|
|
| T |
18731551 |
atgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtg |
18731650 |
T |
|
| Q |
115 |
ctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagc |
187 |
Q |
| |
|
|||| |||||||||| |||||| | || ||| ||||||||||||| | ||||||||||| |||||| |||| |
|
|
| T |
18731651 |
atggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagc |
18731723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 18655521 - 18655702
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||| | |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || || | |||||| ||| | |
|
|
| T |
18655521 |
tgaatgatgcggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaagatcctagactcttgaatggcattgtcga |
18655620 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| |||| |||||||||| || ||| | || ||| ||||||||||||| | ||||||||||| |||||| |||| ||||| |
|
|
| T |
18655621 |
gtgatggtttgatttcatccccactttgcagctcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgta |
18655702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 5091023 - 5091174
Alignment:
| Q |
24 |
acaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtga |
123 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||| | |||| || || ||| | |||| | ||||| | ||||||||||||||||| ||||| | |
|
|
| T |
5091023 |
acaagttcatctaaacaaaacgaagaagaagcatagtggttagagaaaacgataatgacaatcttagattcttgaatggccttgagaagtgacggtgtta |
5091122 |
T |
|
| Q |
124 |
tttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
||| ||||||| |||| || |||||||||||||| | || |||||||| |
|
|
| T |
5091123 |
tttggtctcctcgctgaagctctctgtcatcaatgaaggtgtgaattccctt |
5091174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 17989097 - 17989185
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaat |
100 |
Q |
| |
|
||||||||||| |||||| ||||||||| | |||||||| ||||||||| |||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
17989097 |
tgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat |
17989185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 18073892 - 18073804
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaat |
100 |
Q |
| |
|
||||||||||| |||||| ||||||||| | |||||||| ||||||||| |||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
18073892 |
tgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat |
18073804 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 29273827 - 29274008
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || || |||||| | ||| | |
|
|
| T |
29273827 |
tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaattctagactcttcaatgacattgtcga |
29273926 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattcccttttcagtatgagccttgta |
193 |
Q |
| |
|
||| || | |||||||||| |||||| |||| ||| |||||||||||| | ||||||||||| |||||| ||| |||||| |
|
|
| T |
29273927 |
gtgatgatttgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagtcttgta |
29274008 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 76; Significance: 3e-35; HSPs: 4)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 34855 - 34692
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| || || ||||||||||||| || |
|
|
| T |
34855 |
tgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaa |
34756 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
||| |||||| ||||||||||||| | |||| || |||||||||||||| | ||||||||||| |
|
|
| T |
34755 |
gtgatggtgttatttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattccctt |
34692 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 27580 - 27455
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| ||||| |||||| |||||| |
|
|
| T |
27580 |
aatgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaa |
27481 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctc |
135 |
Q |
| |
|
||||| || ||| |||||||| |||| |
|
|
| T |
27480 |
aagtgatgatgttatttcatcacctc |
27455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 43096 - 42947
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| || |||||||| |||||||| || || ||||||||||||| || |
|
|
| T |
43096 |
tgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaa |
42997 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
||| |||||| |||| || |||| | |||| || |||||||||||||| |
|
|
| T |
42996 |
gtgatggtgttattttgtcacctcctggaagttctctgtcatcaatgaag |
42947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 116926 - 116777
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||| || | |||||| |||||||| || || ||||||||||||| || |
|
|
| T |
116926 |
tgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggccttgaaaa |
116827 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaag |
161 |
Q |
| |
|
||| ||||| ||||| || |||| | |||| || ||||||||||||||| |
|
|
| T |
116826 |
gtgacggtgttatttcgtcacctcgttgaaggtctttgtcatcaatgaag |
116777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 3279820 - 3279695
Alignment:
| Q |
10 |
aatgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgag |
109 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| |||||| |||||||||||||| || || |||||||||||| |||| || || |||||||||| |
|
|
| T |
3279820 |
aatgaatgatgtggacaagttcgtccaaacaaaatatagaagaagcatagttgatagagaagaccggaataaaaatcatggactcttcgatggccttgac |
3279721 |
T |
|
| Q |
110 |
aagtgctggtgtgatttcatctcctc |
135 |
Q |
| |
|
||||| | ||||||||||||| |||| |
|
|
| T |
3279720 |
aagtgattgtgtgatttcatcacctc |
3279695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 17993741 - 17993789
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagt |
60 |
Q |
| |
|
||||||||||| |||||||| || |||||||| |||||||| ||||||| |
|
|
| T |
17993741 |
tgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt |
17993789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 58339 - 58502
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaa |
111 |
Q |
| |
|
||||||||||| |||||||| | ||| ||||| |||||||| |||||||||||||| || || ||||| |||||||| || || | ||||||||||| || |
|
|
| T |
58339 |
tgaatgatgtggacaagttcgttcaagcaaaatgaagaagaagcatagttgatagacaagacgggaatgaaaatcctagactctttaatggccttgaaaa |
58438 |
T |
|
| Q |
112 |
gtgctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
||| |||||| ||||| || |||| | |||| || ||||||| |||||| | |||||||||| |
|
|
| T |
58439 |
gtgatggtgttatttcgtcacctccttgaagctctctgtcatccatgaaggttcggattccctt |
58502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 16689139 - 16688978
Alignment:
| Q |
14 |
aatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagt |
113 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| | |||||||| |||||||||| || || |||||| || || ||||| ||||||| |||| |
|
|
| T |
16689139 |
aatgatgttgacaagttcatccaaacaaaacgaggaaaatgcatagttcttagaaaacacggggattgcaatccttgagtcttcaattgccttgataagt |
16689040 |
T |
|
| Q |
114 |
gctggtgtgatttcatctcctcttcgaagatcattgtcatcaatgaagttatggattccctt |
175 |
Q |
| |
|
| ||||||||||| || ||||| |||| || ||||||||||||||| | |||||||||| |
|
|
| T |
16689039 |
gatggtgtgattttgtcacctctctgaagttccttgtcatcaatgaagacacggattccctt |
16688978 |
T |
|
Back To:
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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 59700 - 59612
Alignment:
| Q |
12 |
tgaatgatgtgaacaagttcatccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctggattcatcaat |
100 |
Q |
| |
|
||||||||||| |||||| ||||||||| | |||||||| ||||||||| |||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
59700 |
tgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat |
59612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 214467 - 214513
Alignment:
| Q |
88 |
tggattcatcaatggccttgagaagtgctggtgtgatttcatctcct |
134 |
Q |
| |
|
||||||||||||| ||||||| ||||| |||||| |||||||||||| |
|
|
| T |
214467 |
tggattcatcaattgccttgaaaagtgatggtgtaatttcatctcct |
214513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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