View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3223_low_166 (Length: 206)
Name: NF3223_low_166
Description: NF3223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3223_low_166 |
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Alignment Details
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 56471639 - 56471817
Alignment:
| Q |
13 |
acctgtgtctaaaccaataagaagtgcaaaagtccatttgaggatggcatactgcacaatctcggcttttgctccaagcctccggtcttgcttgaataga |
112 |
Q |
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| T |
56471639 |
acctgtgcctaaaccaataagaagtgcaaaagtccatttgaggatggcatactgcacaatctcggcttttgctccaagcctccggtcttgcttgaataga |
56471738 |
T |
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| Q |
113 |
tcattctcaacaatcctacatgaaggttaaattaattaatgaatgaaaaattgaaacaaaagcgatgatatgtcattat |
191 |
Q |
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| T |
56471739 |
tcattctcaacaatcctacatgaaggttaaattaattaatgaatgaaaaattgaaacaaaagcgatgatatgtcattat |
56471817 |
T |
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