View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3223_low_56 (Length: 348)

Name: NF3223_low_56
Description: NF3223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3223_low_56
NF3223_low_56
[»] chr8 (17 HSPs)
chr8 (156-260)||(2165055-2165159)
chr8 (156-260)||(9178720-9178824)
chr8 (159-260)||(33628667-33628768)
chr8 (178-260)||(32718955-32719037)
chr8 (193-259)||(44501990-44502056)
chr8 (165-260)||(19725357-19725452)
chr8 (178-260)||(43460674-43460756)
chr8 (159-260)||(7087931-7088032)
chr8 (166-260)||(16871565-16871659)
chr8 (166-260)||(36496145-36496239)
chr8 (156-257)||(13197797-13197898)
chr8 (159-260)||(24247739-24247840)
chr8 (165-216)||(3642985-3643036)
chr8 (203-260)||(4624742-4624799)
chr8 (165-233)||(12980324-12980392)
chr8 (178-254)||(17642397-17642473)
chr8 (168-236)||(43049849-43049917)
[»] chr4 (27 HSPs)
chr4 (156-260)||(16917526-16917630)
chr4 (156-260)||(17616407-17616511)
chr4 (156-261)||(45953954-45954059)
chr4 (156-260)||(36188196-36188300)
chr4 (156-260)||(27734910-27735014)
chr4 (156-260)||(34791880-34791984)
chr4 (178-260)||(34936555-34936637)
chr4 (166-260)||(54851333-54851427)
chr4 (156-260)||(56272880-56272984)
chr4 (166-260)||(50716525-50716619)
chr4 (159-260)||(20927746-20927847)
chr4 (159-260)||(28013031-28013132)
chr4 (159-260)||(30839243-30839344)
chr4 (159-260)||(52104408-52104509)
chr4 (159-258)||(40319305-40319404)
chr4 (159-257)||(25814384-25814482)
chr4 (166-260)||(46548674-46548768)
chr4 (159-260)||(52759787-52759888)
chr4 (165-257)||(22413871-22413963)
chr4 (156-259)||(24347137-24347240)
chr4 (178-260)||(48058800-48058882)
chr4 (159-236)||(30951148-30951225)
chr4 (159-260)||(23390805-23390906)
chr4 (165-221)||(46564752-46564808)
chr4 (159-258)||(48253943-48254042)
chr4 (168-254)||(53695392-53695478)
chr4 (156-250)||(39512958-39513052)
[»] chr5 (14 HSPs)
chr5 (156-259)||(41609387-41609490)
chr5 (156-260)||(35777381-35777485)
chr5 (156-257)||(14575476-14575577)
chr5 (156-259)||(14721356-14721459)
chr5 (156-257)||(664749-664850)
chr5 (159-260)||(231803-231904)
chr5 (159-260)||(14054718-14054819)
chr5 (159-256)||(32092386-32092483)
chr5 (156-226)||(972451-972521)
chr5 (178-260)||(15264367-15264449)
chr5 (168-236)||(28332436-28332504)
chr5 (178-260)||(43167266-43167348)
chr5 (201-254)||(2318431-2318484)
chr5 (178-254)||(13091237-13091313)
[»] chr3 (20 HSPs)
chr3 (157-260)||(8324691-8324794)
chr3 (156-261)||(54911050-54911155)
chr3 (261-332)||(43417136-43417207)
chr3 (159-260)||(47243990-47244091)
chr3 (156-260)||(52457948-52458052)
chr3 (156-261)||(40284213-40284318)
chr3 (159-260)||(47599949-47600050)
chr3 (160-260)||(41574737-41574836)
chr3 (156-260)||(52178953-52179057)
chr3 (159-254)||(43744231-43744326)
chr3 (159-260)||(54831128-54831229)
chr3 (178-260)||(19608615-19608697)
chr3 (178-261)||(32621663-32621746)
chr3 (165-260)||(46948621-46948716)
chr3 (178-260)||(41902273-41902355)
chr3 (165-254)||(27647791-27647880)
chr3 (168-260)||(788473-788565)
chr3 (178-260)||(21288813-21288895)
chr3 (159-260)||(25558655-25558757)
chr3 (156-260)||(45727091-45727195)
[»] chr2 (17 HSPs)
chr2 (156-257)||(3911528-3911629)
chr2 (156-260)||(36023889-36023992)
chr2 (156-260)||(13119119-13119223)
chr2 (156-260)||(36430612-36430716)
chr2 (159-260)||(325748-325849)
chr2 (156-260)||(39307313-39307417)
chr2 (156-260)||(44544348-44544452)
chr2 (166-260)||(29943867-29943961)
chr2 (178-259)||(22595060-22595141)
chr2 (156-260)||(13507254-13507358)
chr2 (178-257)||(15354756-15354835)
chr2 (159-260)||(36054250-36054351)
chr2 (178-260)||(2640241-2640323)
chr2 (159-260)||(6279535-6279636)
chr2 (165-260)||(5155694-5155789)
chr2 (159-257)||(41515836-41515934)
chr2 (262-324)||(9450434-9450495)
[»] chr7 (18 HSPs)
chr7 (156-260)||(20883926-20884030)
chr7 (156-260)||(24189051-24189155)
chr7 (156-260)||(968499-968603)
chr7 (156-260)||(38034723-38034827)
chr7 (166-260)||(45704501-45704595)
chr7 (181-258)||(31603563-31603639)
chr7 (166-260)||(39925795-39925889)
chr7 (165-260)||(24203178-24203273)
chr7 (156-257)||(37118337-37118438)
chr7 (166-258)||(37001001-37001093)
chr7 (178-249)||(15877398-15877469)
chr7 (165-260)||(48900512-48900607)
chr7 (168-254)||(20438822-20438908)
chr7 (180-260)||(19503120-19503200)
chr7 (165-236)||(30819760-30819831)
chr7 (178-260)||(29273306-29273388)
chr7 (156-236)||(46879894-46879975)
chr7 (168-236)||(43750389-43750457)
[»] chr1 (23 HSPs)
chr1 (156-260)||(36672231-36672335)
chr1 (159-260)||(6079593-6079694)
chr1 (156-257)||(39627831-39627932)
chr1 (156-260)||(5800217-5800321)
chr1 (156-260)||(46153232-46153336)
chr1 (178-257)||(31216477-31216556)
chr1 (156-260)||(46152178-46152282)
chr1 (159-260)||(33196265-33196366)
chr1 (165-260)||(11444271-11444366)
chr1 (165-260)||(26921676-26921771)
chr1 (159-247)||(22667278-22667366)
chr1 (204-260)||(51401811-51401867)
chr1 (261-332)||(30237106-30237177)
chr1 (156-260)||(42647698-42647802)
chr1 (159-258)||(33485930-33486029)
chr1 (165-260)||(45427127-45427221)
chr1 (165-259)||(12979893-12979987)
chr1 (168-254)||(51977864-51977950)
chr1 (168-260)||(33910004-33910096)
chr1 (168-254)||(26010948-26011034)
chr1 (159-236)||(41903400-41903477)
chr1 (182-259)||(43025112-43025189)
chr1 (178-254)||(50239283-50239359)
[»] scaffold0059 (1 HSPs)
scaffold0059 (156-260)||(70694-70798)
[»] scaffold0008 (1 HSPs)
scaffold0008 (156-260)||(262825-262929)
[»] scaffold0190 (1 HSPs)
scaffold0190 (156-258)||(5700-5802)
[»] chr6 (9 HSPs)
chr6 (166-260)||(32715915-32716009)
chr6 (159-260)||(22735007-22735108)
chr6 (160-257)||(10091793-10091890)
chr6 (159-260)||(5078452-5078553)
chr6 (156-260)||(2198084-2198188)
chr6 (156-236)||(26611770-26611850)
chr6 (165-260)||(33610702-33610796)
chr6 (159-260)||(3448101-3448202)
chr6 (178-254)||(15383209-15383285)


Alignment Details
Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 2165055 - 2165159
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2165055 gtcgataaatatctctttatcacataaaaattatcgttaacttataaatttatgaaataggtgtactggtacaccttaattgcagggtgtaccgtagaaa 2165154  T
Q  256 ctccc 260  Q
    |||||    
T  2165155 ctccc 2165159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 9178824 - 9178720
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||    
T  9178824 gtcgataaatatctctttatcacataaaaattatcgttaacttatagatttatgaaataggtgtactgatacaccttaattgaaggatgtaccgtagaaa 9178725  T
Q  256 ctccc 260  Q
    |||||    
T  9178724 ctccc 9178720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 33628667 - 33628768
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| ||||||||||||||| |||||||||||| ||||||  |||||||||| |||||||||    
T  33628667 gataaatatctctttattacataaaaatgatcgataacttattgatttatgaaataggtgtactggtacactttaatttaagggtgtaccatagaaactc 33628766  T
Q  259 cc 260  Q
    ||    
T  33628767 cc 33628768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 32719037 - 32718955
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| ||||||||| |||  ||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||    
T  32719037 cataaaaatgatcgttaacttattaatttatgaaataggagtaccggtacaccttaatttaagtgtgtaccgtagaaactccc 32718955  T

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Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 44502056 - 44501990
Alignment:
Q  193 taacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactcc 259  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  44502056 taacttatagatttatgaaataggtgtactagtacaccttaattgaagggtgtaccgtagaaactcc 44501990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 19725357 - 19725452
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||||||||  ||||||||||||| ||||| ||| ||||||||||||||  ||||  ||||| |||||||  ||||||||||||||||||||||    
T  19725357 tatctctttattacataaaaattatcattaacttattgatttatgaaatagatgtacctgtacatcttaatttaagggtgtaccgtagaaactccc 19725452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 43460674 - 43460756
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| ||||||| | ||| ||||||||||| ||| |||| ||||||||||||||  |||||||||| |||||||||||    
T  43460674 cataaaaatgatcgttagcttattgatttatgaaacaggtgtaccggtacaccttaatttaagggtgtaccatagaaactccc 43460756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 7087931 - 7088032
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| |||  |||| ||| ||||||||||||||| |||||| ||||| ||||||  ||||| |||| |||||||||    
T  7087931 gataaatatctctttattacataaaaatgatcaataacttattgatttatgaaataggtgtactgatacactttaatttaagggtataccatagaaactc 7088030  T
Q  259 cc 260  Q
    ||    
T  7088031 cc 7088032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 16871659 - 16871565
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  ||||||||| |||| |||  ||| ||||||||||||||| |||||||||||| ||||||  | |||||| | |||||||||||    
T  16871659 atctctttattacataaaaatgatcgataagttattgatttatgaaataggtgtactggtacactttaatttaatggtgtatcatagaaactccc 16871565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 36496239 - 36496145
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  ||||||||| || |||||| ||| || |||||||||||| |||| |||||||||||||   ||| | ||||||||||||||||    
T  36496239 atctctttattacataaaaatgattgttaacttattgaattatgaaataggtgtaccggtacaccttaatctaaggatataccgtagaaactccc 36496145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 13197797 - 13197898
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    ||||| || |||||||||||  ||||| ||| ||||||||| ||| ||||||||||||||  ||||  |||| ||||||||  ||| |||||| ||||||    
T  13197797 gtcgacaattatctctttattacataataatgatcgttaacttattgatttatgaaatagatgtaccagtactccttaatttaaggttgtaccatagaaa 13197896  T
Q  256 ct 257  Q
    ||    
T  13197897 ct 13197898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 24247739 - 24247840
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  || |||||| |||| |||| ||| |||||||| |||| | ||||  |||||| ||||||  |||||||||| |||||||||    
T  24247739 gataaatatctctttattacagaaaaatgatcgataacttattgatttatggaataagtgtaccagtacactttaatttaagggtgtaccatagaaactc 24247838  T
Q  259 cc 260  Q
    ||    
T  24247839 cc 24247840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 3642985 - 3643036
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaatagg 216  Q
    |||||||||||  ||||||||| ||| ||||||||| |||||||||||||||    
T  3642985 tatctctttattacataaaaataatcattaacgtattgatttatgaaatagg 3643036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 4624742 - 4624799
Alignment:
Q  203 atttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||| |||||  |||| ||||||||||||||  ||||||||||||| ||||||||    
T  4624742 atttatggaatagatgtaccggtacaccttaatttaagggtgtaccgtataaactccc 4624799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 12980324 - 12980392
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacacctta 233  Q
    |||||||||||  ||||||||| ||||||||| ||  ||||||||||||||| || | | |||||||||    
T  12980324 tatctctttattacataaaaatgatcgttaacttaatgatttatgaaataggtgttccgatacacctta 12980392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 17642397 - 17642473
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    ||||||||| || |||||  |||| |||| |||| || |||||| ||||||||||||||   |||||||||||||||    
T  17642397 cataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaa 17642473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 43049849 - 43049917
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaatt 236  Q
    ||||||||  ||||||||| || |||||  ||||||||| |||| || ||||| |||||||||||||||    
T  43049849 ctctttatttcataaaaataatagttaatttatagatttttgaagtaagagtattggtacaccttaatt 43049917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 16917526 - 16917630
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  16917526 gtcgataaatatctctttatcacataaaaattatcgttaacttatagatttatgaaataggtgtactggtacatcttaattgaagggtgtaccgtagaaa 16917625  T
Q  256 ctccc 260  Q
    |||||    
T  16917626 ctccc 16917630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 17616511 - 17616407
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||  |||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  17616511 gtcgataaatatctctttatcacataaaaattatcgttaatttataaatttataaaataggtgtactggtacaccttaattgaagggtgtaccgtagaaa 17616412  T
Q  256 ctccc 260  Q
    |||||    
T  17616411 ctccc 17616407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 45953954 - 45954059
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||| | |||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||    
T  45953954 gtcgataaatatttgtttatcacataaaaattatcgttaacttatagatttatgaaatatgtgtactggtacaccttaattgaagggtgtaccatagaaa 45954053  T
Q  256 ctcccg 261  Q
    ||||||    
T  45954054 ctcccg 45954059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 36188196 - 36188300
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||  ||| |||||| ||||||    
T  36188196 gtcgataaatatctctttatcacataaaaattatcgttaacttataaatttatgaaataggtgtactggtacaccttaattaaaggatgtaccatagaaa 36188295  T
Q  256 ctccc 260  Q
    |||||    
T  36188296 ctccc 36188300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 27735014 - 27734910
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||||  ||| |||||||||||||    
T  27735014 gtcgataaatatctctttatcatataaaaattatcgttaacttatagatttatgaaacaggtgtactggtacatcttaattcaaggatgtaccgtagaaa 27734915  T
Q  256 ctccc 260  Q
    |||||    
T  27734914 ctccc 27734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 34791984 - 34791880
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||  ||||||||||||||||||| | || |||||||||| ||| |||| ||||||||||||||  | | |||||||||||||    
T  34791984 gtcgataaatatctctttattacataaaaattatcgttaacttgtaaatttatgaaacaggtgtaccggtacaccttaatttaaagatgtaccgtagaaa 34791885  T
Q  256 ctccc 260  Q
    |||||    
T  34791884 ctccc 34791880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 34936637 - 34936555
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||||||||||  |||||||| |||||||||||||    
T  34936637 cataaaaatgatcgttaacttattgatttatgaaacaggagtaccggtacaccttaatttaagggtgtatcgtagaaactccc 34936555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 54851333 - 54851427
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  ||||||||| || |||||| ||| || |||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  54851333 atctctttattacataaaaatgattgttaacttattgaattatgaaataggtgtaccggtacaccttaatttaagggtgtaccgtagaaactccc 54851427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 56272880 - 56272984
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| || |||||| |  ||||||||| ||||||| | ||| ||||||||||| ||| |||| ||||||||||||||  |||||||||||||||||    
T  56272880 gtcgataaataactcttttttacataaaaatgatcgttagcttattgatttatgaaacaggtgtaccggtacaccttaatttaagggtgtaccgtagaaa 56272979  T
Q  256 ctccc 260  Q
    |||||    
T  56272980 ctccc 56272984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 50716525 - 50716619
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  ||||||||| || |||||| ||| || |||||||||||| |||| ||||||||||||||  || |||||||||||||||||||    
T  50716525 atctctttattacataaaaatgattgttaacttattgaattatgaaataggtgtaccggtacaccttaatttaagtgtgtaccgtagaaactccc 50716619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 20927746 - 20927847
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| ||||||| ||||||| ||| |||||||| ||||||  |||||||||| |||||||||    
T  20927746 gataaatatctctttattacataaaaatgatcgataacttattgatttataaaataggtgtattggtacactttaatttaagggtgtaccatagaaactc 20927845  T
Q  259 cc 260  Q
    ||    
T  20927846 cc 20927847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 28013132 - 28013031
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  || |||||| |||| |||| ||| ||||||||||||||| |||| ||||||| ||||||  |||||||||| |||||||||    
T  28013132 gataaatatctctttattacagaaaaatgatcgataacttattgatttatgaaataggtgtaccggtacactttaatttaagggtgtaccatagaaactc 28013033  T
Q  259 cc 260  Q
    ||    
T  28013032 cc 28013031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 30839344 - 30839243
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| || | |||| ||| ||||||||||||||  |||||||||||| ||||||  |||||||||| |||||||||    
T  30839344 gataaatatctctttattacataaaaatgattgataacttattgatttatgaaatagatgtactggtacactttaatttaagggtgtaccatagaaactc 30839245  T
Q  259 cc 260  Q
    ||    
T  30839244 cc 30839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 52104509 - 52104408
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| ||||||||||||||  |||||||||||| ||||||  ||| |||||| |||||||||    
T  52104509 gataaatatctctttattacataaaaatgatcgataacttattgatttatgaaatagatgtactggtacactttaatttaaggatgtaccatagaaactc 52104410  T
Q  259 cc 260  Q
    ||    
T  52104409 cc 52104408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 40319305 - 40319404
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  || |||||| |||| |||| ||| ||||||||||||||| |||| ||||||| ||||||  |||||||||| |||||||||    
T  40319305 gataaatatctctttattacagaaaaatgatcgataacttattgatttatgaaataggtgtaccggtacactttaatttaagggtgtaccatagaaactc 40319404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 25814482 - 25814384
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaact 257  Q
    ||||| |||||||||||  ||||||||| |||| |||| |||  |||||||||||||| |||||| ||||| ||||||  |||||||||| ||||||||    
T  25814482 gataaatatctctttattacataaaaatgatcgataacttattaatttatgaaataggtgtactgatacactttaatttaagggtgtaccatagaaact 25814384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 46548674 - 46548768
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  || |||||| || |||||| ||| || ||| |||||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  46548674 atctctttattacaaaaaaatgattgttaacttattgaattaagaaataggtgtaccggtacaccttaatttaagggtgtaccgtagaaactccc 46548768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 52759888 - 52759787
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||   |||||||| || | |||| ||| ||||||||||||||| |||||||||||| ||||||  |||||||||| || ||||||    
T  52759888 gataaatatctctttattatataaaaataattgataacttattgatttatgaaataggtgtactggtacactttaatttaagggtgtaccatataaactc 52759789  T
Q  259 cc 260  Q
    ||    
T  52759788 cc 52759787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 22413871 - 22413963
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaact 257  Q
    |||||||||||  ||||||||| ||| ||||| ||| ||||||||||||||| |||| |||||| |||||||  ||| ||||||||| |||||    
T  22413871 tatctctttattacataaaaataatcattaacttattgatttatgaaataggtgtaccggtacatcttaatttaaggatgtaccgtaaaaact 22413963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 24347137 - 24347240
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||| ||  ||||||||||||||||||  | ||||||||||||| |||  |||  ||||||| |||||  | |||||||||||||||    
T  24347137 gtcgataaatatctcttcattacataaaaattatcgttaatttgtagatttatgaaacaggtataccagtacaccctaatttaaaggtgtaccgtagaaa 24347236  T
Q  256 ctcc 259  Q
    ||||    
T  24347237 ctcc 24347240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 48058800 - 48058882
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| ||||||| | ||| ||||||||||| ||| |||| | || |||||||||  ||||||||||||||||||||||    
T  48058800 cataaaaatgatcgttagcttattgatttatgaaacaggtgtaccgatataccttaatttaagggtgtaccgtagaaactccc 48058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 30951225 - 30951148
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaatt 236  Q
    ||||| |||||||||||  ||||||||| |||| |||  ||| ||||||||||||||| |||||||||||| ||||||    
T  30951225 gataaatatctctttattacataaaaatgatcgataatttattgatttatgaaataggtgtactggtacactttaatt 30951148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 23390805 - 23390906
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  || |||||| |||| |||| ||| ||||||||||||||  ||||  |||||| ||||||  |||||||| | |||||||||    
T  23390805 gataaatatctctttattacagaaaaatgatcgataacttattgatttatgaaatagatgtaccagtacactttaatttaagggtgtatcatagaaactc 23390904  T
Q  259 cc 260  Q
    ||    
T  23390905 cc 23390906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 46564808 - 46564752
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtac 221  Q
    |||||||||||  ||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  46564808 tatctctttattacataaaaataatcattaacgtattgatttatgaaataggtgtac 46564752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 48254042 - 48253943
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| || | |||| ||| ||||||||||||||| |||||  ||||| ||||||  ||  |||||| |||||||||    
T  48254042 gataaatatctctttattacataaaaatgattgataacttattgatttatgaaataggtgtactaatacactttaatttaagaatgtaccatagaaactc 48253943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 53695478 - 53695392
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaa-ttgcagggtgtaccgtagaa 254  Q
    ||||||||  ||||||||| || |||||  || |||||| |||| ||||||||| |||||||||||| ||||| ||||||||||||||    
T  53695478 ctctttattccataaaaataatagttaatttaaagatttttgaattaggagtaccggtacaccttaatttgca-ggtgtaccgtagaa 53695392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 39512958 - 39513052
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgt 250  Q
    ||||||||  ||||||||||  ||||||||  ||  ||||| ||| || |||||||||||| |||| ||||||||||||||  | ||||||||||    
T  39512958 gtcgataaacatctctttattacataaaaaagattattaacttattgaattatgaaataggtgtaccggtacaccttaatttaaaggtgtaccgt 39513052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 41609387 - 41609490
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  41609387 gtcgataaatatctctttatcacataaaaattatcgttaacttatagatttatgaaatagatgtactggtacaccttaattgaagggtgtaccgtagaaa 41609486  T
Q  256 ctcc 259  Q
    ||||    
T  41609487 ctcc 41609490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 35777485 - 35777381
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    ||||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||    
T  35777485 gtcgataaagatctctttatcacataaaaattatcgttaacttatagatttatgaaataggtgtactggtacaccttaattgaaaggtgtaccgtagaaa 35777386  T
Q  256 ctccc 260  Q
    |||||    
T  35777385 ctccc 35777381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 14575577 - 14575476
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||    
T  14575577 gtcgataaatatctttttatcacataaaaattatcgttaacttatagatttatgaaataggtgtactggtacaccttaattgaagggtgtgccatagaaa 14575478  T
Q  256 ct 257  Q
    ||    
T  14575477 ct 14575476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 14721356 - 14721459
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||| ||||| |||||||||||||||||||  |||| |||||||||||||| ||||||||||||| |||    
T  14721356 gtcgataaatatctctttatcacataaaaattatctttaacttatagatttatgaaataggtatactagtacaccttaattgaagggtgtaccgtaaaaa 14721455  T
Q  256 ctcc 259  Q
    ||||    
T  14721456 ctcc 14721459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 664850 - 664749
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||| ||||||||||||||| |||||||||||||| |||  |||||||||||||||||||| ||| |||||||||||||    
T  664850 gtcgataaatatctctttatcacattaaaattatcgttaacttatagatttatgaattagatgtactggtacaccttaattgaaggttgtaccgtagaaa 664751  T
Q  256 ct 257  Q
    ||    
T  664750 ct 664749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 231803 - 231904
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| ||||||| ||||||| |||| ||||||| ||||||  |||||||||| |||||||||    
T  231803 gataaatatctctttattacataaaaatgatcgataacttattgatttataaaataggtgtaccggtacactttaatttaagggtgtaccatagaaactc 231902  T
Q  259 cc 260  Q
    ||    
T  231903 cc 231904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 14054718 - 14054819
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  || |||||| |||| |||| ||| ||||||||||||||| |||| ||||||| ||||||  |||||||||| |||||||||    
T  14054718 gataaatatctctttattacagaaaaatgatcgataacttattgatttatgaaataggtgtaccggtacactttaatttaagggtgtaccatagaaactc 14054817  T
Q  259 cc 260  Q
    ||    
T  14054818 cc 14054819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 32092386 - 32092483
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaac 256  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| ||||||| ||||||| |||||||||||| ||||||  |||||||||| |||||||    
T  32092386 gataaatatctctttattacataaaaatgatcgataacttattgatttataaaataggtgtactggtacactttaatttaagggtgtaccatagaaac 32092483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 972451 - 972521
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggta 226  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||| || |||| ||| |||||    
T  972451 gtcgataaatatctctttatcacataaaaattatcgttaacttatagatttataaattaggtgtattggta 972521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 15264367 - 15264449
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| ||| ||||| ||| ||||||||||||||| |||| | |||| |||||||  ||||||||||||||||||||||    
T  15264367 cataaaaataatcattaacttattgatttatgaaataggtgtaccgatacatcttaatttaagggtgtaccgtagaaactccc 15264449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 28332436 - 28332504
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaatt 236  Q
    ||||||||  ||||||||| || |||||  || |||||| |||||||||||||| ||||||||||||||    
T  28332436 ctctttattccataaaaataatagttaatttaaagatttttgaaataggagtaccggtacaccttaatt 28332504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 43167266 - 43167348
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||| || ||| ||||| ||| ||||||||||| ||| |||| | || |||||||||  ||||||||| ||||||||||||    
T  43167266 cataaagatgatctttaacttattgatttatgaaacaggtgtaccgatataccttaatttaagggtgtacagtagaaactccc 43167348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 2318484 - 2318431
Alignment:
Q  201 agatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    |||||| |||| ||||||||| ||||||||||||||   |||||||||||||||    
T  2318484 agatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgtagaa 2318431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 13091237 - 13091313
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    ||||||||| || |||||  |||| |||| |||| || |||||| ||||||||||||||   |||||||||||||||    
T  13091237 cataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacgggtgtaccgtagaa 13091313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 8324691 - 8324794
Alignment:
Q  157 tcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaac 256  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  8324691 tcgataaatatctctttatcacataaaaattatcgttaacttatagatttatgaaataggtgtactggtacaccttaattgacgggtgtaccgtagaaac 8324790  T
Q  257 tccc 260  Q
    ||||    
T  8324791 tccc 8324794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 54911050 - 54911155
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||  |||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  54911050 gtcgataaatatctctttatcacataaaaattatcgttaatttataaatttataaaataggtgtactggtacaccttaattgaagggtgtaccgtagaaa 54911149  T
Q  256 ctcccg 261  Q
    ||||||    
T  54911150 ctcccg 54911155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 43417207 - 43417136
Alignment:
Q  261 gggatgaaattactaaaatgtcattttacatgggatgtgtaatagaggtaggagaaaaaagggtgtcaacat 332  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43417207 gggatgaaattactaaaatatcattttacatgggatgtgtaatagaggtaggagaaaaaagggtgtcaacat 43417136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 47243990 - 47244091
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| ||||| |||||  ||||||||| |||| |||| ||| ||||||||||||||| |||||||||||| ||||||  |||||||||| |||||||||    
T  47243990 gataaatatctttttattacataaaaatgatcgataacttattgatttatgaaataggtgtactggtacactttaatttaagggtgtaccatagaaactc 47244089  T
Q  259 cc 260  Q
    ||    
T  47244090 cc 47244091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 52458052 - 52457948
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    ||||||||  ||||||||||  ||||||||| || |||||| ||| || |||||||||||| |||| ||||||||||||||  ||||| |||||||||||    
T  52458052 gtcgataaacatctctttattacataaaaatgattgttaacttattgaattatgaaataggtgtaccggtacaccttaatttaagggtataccgtagaaa 52457953  T
Q  256 ctccc 260  Q
    |||||    
T  52457952 ctccc 52457948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 40284213 - 40284318
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    ||||| || ||| |||||||  ||||||||| ||||||||| |||  |||||||||||| | |||  ||||||||||||||  |||||||||||||||||    
T  40284213 gtcgacaaatatttctttattacataaaaataatcgttaacttatttatttatgaaataagtgtatcggtacaccttaatttaagggtgtaccgtagaaa 40284312  T
Q  256 ctcccg 261  Q
    ||||||    
T  40284313 ctcccg 40284318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 47600050 - 47599949
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||   |||||||| |||| |||| ||| ||||||||||||||  |||||||||||| ||||||  |||||||||| |||||||||    
T  47600050 gataaatatctctttattatataaaaatgatcgataacttattgatttatgaaatagatgtactggtacactttaatttaagggtgtaccatagaaactc 47599951  T
Q  259 cc 260  Q
    ||    
T  47599950 cc 47599949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 41574836 - 41574737
Alignment:
Q  160 ataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactcc 259  Q
    |||| |||||||||||  ||||||||| ||| ||||| ||| |||||||||| |||| ||||||||||| |||||||  |||||||| ||||||||||||    
T  41574836 ataaatatctctttattacataaaaataatcattaacttattgatttatgaattaggtgtactggtacatcttaatttaagggtgta-cgtagaaactcc 41574738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 52179057 - 52178953
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| || |||||| |  ||||||||| ||||||||| ||| ||||||||||| |   |||| ||||||||||||||  |||||||||||||||||    
T  52179057 gtcgataaatagctcttttttacataaaaatgatcgttaacttattgatttatgaaacaaatgtaccggtacaccttaatttaagggtgtaccgtagaaa 52178958  T
Q  256 ctccc 260  Q
    |||||    
T  52178957 ctccc 52178953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 43744326 - 43744231
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| ||||||| ||||||| ||||| |||||| ||||||  ||||||||||||||||    
T  43744326 gataaatatctctttattacataaaaatgatcgataacttattgatttataaaataggtgtacttgtacactttaatttaagggtgtaccgtagaa 43744231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 54831128 - 54831229
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  || |||||| |||| |||| ||| ||||||||||||||| |||| ||||||| ||||||  |||||||| | |||||||||    
T  54831128 gataaatatctctttattacagaaaaatgatcgataacttattgatttatgaaataggtgtaccggtacactttaatttaagggtgtatcatagaaactc 54831227  T
Q  259 cc 260  Q
    ||    
T  54831228 cc 54831229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 19608615 - 19608697
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| ||||||||| ||| ||||||||||| ||| |||  ||||||||||||||  | |||| |||||||||||||||    
T  19608615 cataaaaatgatcgttaacttattgatttatgaaacaggtgtatcggtacaccttaatttaatggtgaaccgtagaaactccc 19608697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 32621663 - 32621746
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactcccg 261  Q
    ||||||||| ||| ||| | ||| ||||||||||||||| ||||   ||||||||||||  ||||| |||||||||||||||||    
T  32621663 cataaaaatgatctttatcttattgatttatgaaataggtgtaccaatacaccttaatttaagggtataccgtagaaactcccg 32621746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 46948716 - 46948621
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||||||||  ||||||||| ||| ||||| ||| ||||||||||||||| ||||  ||||| ||||| |  ||| ||||| ||||||||||||    
T  46948716 tatctctttattacataaaaataatcattaacttattgatttatgaaataggtgtaccagtacatcttaaattaaggatgtacagtagaaactccc 46948621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 41902273 - 41902355
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| ||||||| | |||  |||||||||| ||| |||| | ||||||||||||  ||| ||||||||||||||||||    
T  41902273 cataaaaatgatcgttagcttattaatttatgaaacaggtgtaccgatacaccttaatttaaggatgtaccgtagaaactccc 41902355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 27647791 - 27647880
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    |||||||||||  ||||||||| || |||||  || |||||| ||||||||||||||   ||||||||||||   |||||||||||||||    
T  27647791 tatctctttattccataaaaataatagttaatttaaagatttttgaaataggagtaccaatacaccttaatttgcgggtgtaccgtagaa 27647880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 788565 - 788473
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||  ||||||||| || |||||  || |||||| |||| ||||||||| ||||||||||||||   |||||||||||| ||| ||||    
T  788565 ctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgtaaaaattccc 788473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 21288895 - 21288813
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| || |||||  || |||||| |||| ||||||||| | ||||||||||||   |||||||||||||||| ||||    
T  21288895 cataaaaataatagttaatttaaagatttttgaagtaggagtaccgatacaccttaatttgcgggtgtaccgtagaaattccc 21288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 25558655 - 25558757
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtact-ggtacaccttaattgcagggtgtaccgtagaaact 257  Q
    ||||| |||||||||||  ||||||||| |||| |||| |||  |||||||||||||| ||||| ||||||| ||| ||  ||| |||||| || |||||    
T  25558655 gataaatatctctttattacataaaaatgatcgataacttattaatttatgaaataggtgtactaggtacactttagtttaaggatgtaccatacaaact 25558754  T
Q  258 ccc 260  Q
    |||    
T  25558755 ccc 25558757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 45727091 - 45727195
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||  ||| |||||||  ||||||||| || |||||| ||| || |||||| ||||| | |  ||||||||||||||  ||||| ||||||| |||    
T  45727091 gtcgatagatatttctttattacataaaaatgattgttaacttattgaattatgagataggtgaagcggtacaccttaatttaagggtataccgtaaaaa 45727190  T
Q  256 ctccc 260  Q
    |||||    
T  45727191 ctccc 45727195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 3911528 - 3911629
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  3911528 gtcgataaatatctctttatcacgtaaaaattatcgttaacttatagatttatgaaataggtgtactggtacaccttaattgaagggtgtaccgtagaaa 3911627  T
Q  256 ct 257  Q
    ||    
T  3911628 ct 3911629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 36023889 - 36023992
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  36023889 gtcgataaatatctctttatcacataaaaattatcgttaactt-tagatttatgaaataggtgtactggtacaccttaattgaagggtgtaccgtagaaa 36023987  T
Q  256 ctccc 260  Q
    |||||    
T  36023988 ctccc 36023992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 13119119 - 13119223
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||| ||||| |||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  13119119 gtcgataaatatctctttatcacataaaaattatctttaacttatatatttatgaaataggtgtactggtacaccttaattgaaggatgtaccgtagaaa 13119218  T
Q  256 ctccc 260  Q
    |||||    
T  13119219 ctccc 13119223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 36430716 - 36430612
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||| ||| | |||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  36430716 gtcgataaatatctctttatcacataaaaattatctttaccttataaatttatgaaataggtgtaccggtacaccttaattgaagggtgtaccgtagaaa 36430617  T
Q  256 ctccc 260  Q
    |||||    
T  36430616 ctccc 36430612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 325748 - 325849
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||| ||||||||||||||||||| |||| |||||||||||| | |||||||||| |||||| || ||||||||||||||||||||    
T  325748 gataaatatctctttatcacataaaaattatcgttaacttatatatttatgaaataagtgtactggtactccttaactgaagggtgtaccgtagaaactc 325847  T
Q  259 cc 260  Q
    ||    
T  325848 cc 325849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 39307313 - 39307417
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||| | |||||| ||||||||||||||||||| ||| | ||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  39307313 gtcgataaatatttatttatcacataaaaattatcgttaacttatggttttatgaaatatgtgtactggtacaccttaattgaagggtgtaccgtagaaa 39307412  T
Q  256 ctccc 260  Q
    |||||    
T  39307413 ctccc 39307417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 44544348 - 44544452
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||| ||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| ||| |||| ||||||||    
T  44544348 gtcgataaatatctctttatcacattaaaattatcgttaacttatagatttataaaataggtgtactgatacaccttaattgaaggatgtatcgtagaaa 44544447  T
Q  256 ctccc 260  Q
     ||||    
T  44544448 ttccc 44544452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 29943867 - 29943961
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  ||||||||| || |||||| ||| || |||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  29943867 atctctttattacataaaaatgattgttaacttattgaattatgaaataggtgtaccggtacaccttaatttaagggtgtaccgtagaaactccc 29943961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 22595060 - 22595141
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactcc 259  Q
    ||||||||| ||||||||| ||| ||||||||||| ||  |||| ||||||||||||||  |||||||||||||||||||||    
T  22595060 cataaaaatgatcgttaacttattgatttatgaaacagatgtaccggtacaccttaatttaagggtgtaccgtagaaactcc 22595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 13507358 - 13507254
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||  ||||||||| ||| ||||| ||| ||||||||||||||| |||   |||||||||||||  ||| |||||||| ||||    
T  13507358 gtcgataaatatctctttattacataaaaatgatcattaacttattgatttatgaaataggtgtatcagtacaccttaatttaaggatgtaccgtcgaaa 13507259  T
Q  256 ctccc 260  Q
    |||||    
T  13507258 ctccc 13507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 15354756 - 15354835
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaact 257  Q
    ||||||||| || |||||  ||| ||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||    
T  15354756 cataaaaatgatagttaatttattgatttatgaaacaggtgtactggtacaccttaatttaagggtgtaccgtagaaact 15354835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 36054250 - 36054351
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| || | |||| ||| ||||||||||||||| |||||| ||||| ||||||  ||| |||||| |||||||||    
T  36054250 gataaatatctctttattacataaaaatgattgataacttattgatttatgaaataggtgtactgatacactttaatttaaggatgtaccatagaaactc 36054349  T
Q  259 cc 260  Q
    ||    
T  36054350 cc 36054351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 2640241 - 2640323
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| |||| |||| ||| ||||||||||||||| |||||||||||| ||||||  ||| ||||||  ||||||||||    
T  2640241 cataaaaatgatcgataacttattgatttatgaaataggtgtactggtacactttaatttaaggatgtaccaaagaaactccc 2640323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 6279636 - 6279535
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| |||  |||| ||| ||||||||||||||  |||||| ||||| ||||||  |||||||| | |||||||||    
T  6279636 gataaatatctctttattacataaaaatgatcaataacttattgatttatgaaatagatgtactgatacactttaatttaagggtgtatcatagaaactc 6279537  T
Q  259 cc 260  Q
    ||    
T  6279536 cc 6279535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 5155789 - 5155694
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||||||||  ||||||||| ||| ||||||||| |||||||||||||   |||| | |||| |||||||  | ||||||||||| ||||||||    
T  5155789 tatctctttattacataaaaataatcattaacgtattgatttatgaaataaatgtaccgatacatcttaatttaaaggtgtaccgtaaaaactccc 5155694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 41515934 - 41515836
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaact 257  Q
    ||||| |||||||||||  | ||||||| |||| |||| ||| ||||||| ||||||| |||||||||||| ||||||  ||| |||||| || |||||    
T  41515934 gataaatatctctttattacttaaaaatgatcgataacttattgatttataaaataggtgtactggtacactttaatttaaggatgtaccatacaaact 41515836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 9450495 - 9450434
Alignment:
Q  262 ggatgaaattactaaaatgtcattttacatgggatgtgtaatagaggtaggagaaaaaagggt 324  Q
    ||||||| ||||||||||||||||| | || |||||| |||||| ||||||| ||||||||||    
T  9450495 ggatgaacttactaaaatgtcatttcaaataggatgtataataggggtagga-aaaaaagggt 9450434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 20883926 - 20884030
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  20883926 gtcgataaatatctctttatcacataaaagttatcgttaacttatagatttataaaataggtgtactggtacaccttaattgaagggtgtaccgtagaaa 20884025  T
Q  256 ctccc 260  Q
    |||||    
T  20884026 ctccc 20884030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 24189155 - 24189051
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  24189155 gtcgataaatatctctttatcacataaaaattatcgttaacttatagatttatgaaataggtgtactggtacaccttaattgaaaggtgtaccttagaaa 24189056  T
Q  256 ctccc 260  Q
    |||||    
T  24189055 ctccc 24189051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 968603 - 968499
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||||| |||||| ||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  968603 gtcgataaatatctgtttatcacataaaaattatcgttaacttgtagatttatgaaatatgtgtactggtacaccttaattgaagggtgtaccgtagaaa 968504  T
Q  256 ctccc 260  Q
    |||||    
T  968503 ctccc 968499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 38034827 - 38034723
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||| | |||||| |||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||    
T  38034827 gtcgataaatatttgtttatcacataaaaattattgttaacttatagatttatgaaatatgtgtactggtacaccttaattgaagggtgtaccatagaaa 38034728  T
Q  256 ctccc 260  Q
    |||||    
T  38034727 ctccc 38034723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 45704595 - 45704501
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  ||||||||| || |||||| ||| || |||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  45704595 atctctttattacataaaaatgattgttaacttattgaattatgaaataggtgtaccggtacaccttaatttaagggtgtaccgtagaaactccc 45704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 31603563 - 31603639
Alignment:
Q  181 aaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    |||||||||| ||||| ||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  31603563 aaaaattatctttaacttatagatttataaaatagt-gtactggtacaccttaattgaagggtgtaccgtagaaactc 31603639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 39925889 - 39925795
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  ||||||||| || |||||| ||| || |||||||||||| |||| ||||||||||||||  ||| ||||||||||||||||||    
T  39925889 atctctttattacataaaaatgattgttaacttattgaattatgaaataggtgtaccggtacaccttaatttaaggatgtaccgtagaaactccc 39925795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 24203178 - 24203273
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||||||||  ||||||||| ||| ||||  ||| ||||||||||||||| ||||  ||||| |||||||  ||||||||||||||||||||||    
T  24203178 tatctctttattacataaaaataatcattaatttattgatttatgaaataggtgtaccagtacatcttaatttaagggtgtaccgtagaaactccc 24203273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 37118438 - 37118337
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||| |||||||  ||||||||| ||||||||  ||| ||||||||||||||| |||  ||||||||||||||   || |||||||||||||    
T  37118438 gtcgataaatatttctttattacataaaaatgatcgttaatttattgatttatgaaataggtgtatcggtacaccttaatttatggatgtaccgtagaaa 37118339  T
Q  256 ct 257  Q
    ||    
T  37118338 ct 37118337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 37001093 - 37001001
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||||||||  ||||||||| || |||||  ||| || |||||||||||| |||| | ||||||||||||  | ||||||||||||||||||    
T  37001093 atctctttattacataaaaatgattgttaatttattgaattatgaaataggtgtaccgatacaccttaatttaaaggtgtaccgtagaaactc 37001001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 15877398 - 15877469
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccg 249  Q
    ||||||||| ||||||||| |||  |||||||||| ||| |||| ||||||||||||||  |||||||||||    
T  15877398 cataaaaatgatcgttaacttattaatttatgaaacaggtgtaccggtacaccttaatttaagggtgtaccg 15877469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 48900607 - 48900512
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||||||||  ||||||||| ||| || || ||| ||||||||||||||| |||  |||||| ||||| |  ||| ||||||||||||||||||    
T  48900607 tatctctttattacataaaaataatcatttacttattgatttatgaaataggtgtatcggtacatcttaaattaaggatgtaccgtagaaactccc 48900512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 20438908 - 20438822
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    ||||||||  ||||||||| || |||||  || |||||| |||| ||||||||| ||||||||||||||   |||||||||||||||    
T  20438908 ctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgtagaa 20438822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 19503200 - 19503120
Alignment:
Q  180 taaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||| ||||||||| | | ||||||||||| ||| |||| |||||| |||||||  || ||||||| |||||||||||    
T  19503200 taaaaatgatcgttaactttttgatttatgaaacaggtgtaccggtacatcttaatttaagagtgtaccatagaaactccc 19503120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 30819760 - 30819831
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaatt 236  Q
    |||||||||||  ||||||||| ||| ||||| ||| ||||||||||||||  |||| |||||| |||||||    
T  30819760 tatctctttattacataaaaataatcattaacttattgatttatgaaatagatgtaccggtacatcttaatt 30819831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 29273306 - 29273388
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||| ||||||||  |||  ||| | |||| ||| |||| | ||||||||||||  ||||||||||||||||||||||    
T  29273306 cataaaaatgatcgttaaattattaattcacgaaacaggtgtaccgatacaccttaatttaagggtgtaccgtagaaactccc 29273388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 46879975 - 46879894
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgt-atagatttatgaaataggagtactggtacaccttaatt 236  Q
    ||||| || ||| |||||||  ||||||||| ||||||||| | || ||||||||||||| | |||| ||||||||||||||    
T  46879975 gtcgacaaatatatctttattacataaaaataatcgttaaccttattgatttatgaaataagtgtaccggtacaccttaatt 46879894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 43750389 - 43750457
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaatt 236  Q
    ||||||||  ||||||||| || |||||  || |||||| |||| ||||||||| ||||||||||||||    
T  43750389 ctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatt 43750457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 36672231 - 36672335
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||||    
T  36672231 gtcgataaatatctctttatcacataaaaattatcgttaacttatagatttatgaaatagatgtactggtacaccttaattgaagggtgtaacgtagaaa 36672330  T
Q  256 ctccc 260  Q
    |||||    
T  36672331 ctccc 36672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 6079694 - 6079593
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||||||||    
T  6079694 gataaatatctctttatcacataaaaattatcgttaacttatagatttatgaaataggtgtactggtacaccttaatagaagggtgtactgtagaaactc 6079595  T
Q  259 cc 260  Q
    ||    
T  6079594 cc 6079593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 39627932 - 39627831
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||||    
T  39627932 gtcgataaatatctctttatcacataaaaattatcgttaacttatagatttatgaaataggtgtattggtacaccttaattgaagggtgtacagtagaaa 39627833  T
Q  256 ct 257  Q
    ||    
T  39627832 ct 39627831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 5800217 - 5800321
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||||    
T  5800217 gtcgataaatatctctttatcacattaaaattatcgttaacttatagatttatgaaataggtgtactgatacaccttaattgaagagtgtaccgtagaaa 5800316  T
Q  256 ctccc 260  Q
    |||||    
T  5800317 ctccc 5800321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 46153336 - 46153232
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||  |||||||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||||| |||||| || |||||||||||||||||    
T  46153336 gtcgatatatatctctttatcacataaaaattatcgttaacttatatatttatgaaataggtgtactggtactccttaactgaagggtgtaccgtagaaa 46153237  T
Q  256 ctccc 260  Q
    |||||    
T  46153236 ctccc 46153232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 31216477 - 31216556
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaact 257  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  31216477 cataaaaattatcgttaacttatagatttatgaaataggtgtactggtacaccttaattgaagggtgtaccgtagaaact 31216556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 46152282 - 46152178
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||| |||||||||||||  |||||| ||| |||||| || | |||||||||||||||    
T  46152282 gtcgataaatatctctttatcacataaaaattatcgttaacttatatatttatgaaatagatgtactgatactccttaactgaaaggtgtaccgtagaaa 46152183  T
Q  256 ctccc 260  Q
    |||||    
T  46152182 ctccc 46152178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 33196366 - 33196265
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| ||||||||||||||| |||||||||||| ||||||  | |||||||| |||||||||    
T  33196366 gataaatatctctttattacataaaaatgatcgataacttattgatttatgaaataggtgtactggtacactttaatttaaaggtgtaccatagaaactc 33196267  T
Q  259 cc 260  Q
    ||    
T  33196266 cc 33196265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 11444366 - 11444271
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||| |||||  ||||||||| ||| ||||| ||| ||||||||||||||| |||| |||||| |||||||  ||||||||||||||||||||||    
T  11444366 tatctatttattacataaaaataatcattaacttattgatttatgaaataggtgtaccggtacatcttaatttaagggtgtaccgtagaaactccc 11444271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 26921771 - 26921676
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||||||||  |||||| || ||| ||||||||| ||||||||||||||| |||| |||||| |||| ||  ||||||||||||||||||||||    
T  26921771 tatctctttattacataaagataatcattaacgtattgatttatgaaataggtgtaccggtacatcttagtttaagggtgtaccgtagaaactccc 26921676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 22667366 - 22667278
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtac 247  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| ||||||||||||||| |||||||||||  ||||||  |||||||||    
T  22667366 gataaatatctctttattacataaaaatgatcgataacttattgatttatgaaataggtgtactggtacattttaatttaagggtgtac 22667278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 51401867 - 51401811
Alignment:
Q  204 tttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||    
T  51401867 tttatgaaataggtgtattggtacaccttaatttgagggtgtaccgtagaaactccc 51401811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 30237106 - 30237177
Alignment:
Q  261 gggatgaaattactaaaatgtcattttacatgggatgtgtaatagaggtaggagaaaaaagggtgtcaacat 332  Q
    |||||||||||||||||||||||||| ||||| | ||| |||| |||||| ||||| |||| ||||||||||    
T  30237106 gggatgaaattactaaaatgtcatttcacatgaggtgtataatggaggtatgagaataaagagtgtcaacat 30237177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 42647698 - 42647802
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    ||||| ||||| |||||| |  ||||||||| ||  ||||| ||| ||||||||||| ||| |||| ||||||||||||||  |||||||||  ||||||    
T  42647698 gtcgacaagtagctctttgttacataaaaatgatatttaacttattgatttatgaaacaggtgtaccggtacaccttaatttaagggtgtacaatagaaa 42647797  T
Q  256 ctccc 260  Q
    |||||    
T  42647798 ctccc 42647802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 33486029 - 33485930
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| || | |||| ||| ||||||||||||||| ||| || ||||| ||||||  || ||||||| |||||||||    
T  33486029 gataaatatctctttattacataaaaataattgataacttattgatttatgaaataggtgtattgatacactttaatttaagagtgtaccatagaaactc 33485930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 45427221 - 45427127
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||||||||  ||||||||  ||| | ||||||| ||||||||||||||| |||| |||||| |||| ||  ||||||||| ||||||||||||    
T  45427221 tatctctttattacataaaaaa-atcatcaacgtattgatttatgaaataggtgtaccggtacatcttagtttaagggtgtacagtagaaactccc 45427127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 12979893 - 12979987
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactcc 259  Q
    |||||||||||  ||||||||| ||| ||||| ||| ||||||||||||||| |||| |||||| ||||| |  |  |||||| |||||||||||    
T  12979893 tatctctttattacataaaaataatcattaacttattgatttatgaaataggtgtaccggtacatcttaaattaaaagtgtactgtagaaactcc 12979987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 51977950 - 51977864
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    ||||||||  ||||||||| || |||||  || |||||| |||| ||||||||| ||||||||||||||   |||||||||||||||    
T  51977950 ctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgtagaa 51977864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 33910004 - 33910096
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||  ||||||||  || |||||  || |||||| |||| ||||||||| ||||||||||||||   |||||||||||||||| ||||    
T  33910004 ctctttattccataaaaacaatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgtgggtgtaccgtagaaattccc 33910096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 26011034 - 26010948
Alignment:
Q  168 ctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    ||||||||  ||||||||| || |||||  || || ||| |||| ||||||||| ||||||||||||||   |||||||||||||||    
T  26011034 ctctttattccataaaaataatagttaatttaaagttttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgtagaa 26010948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 41903400 - 41903477
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaatt 236  Q
    ||||| |||||||||||  ||||||||| |||| |||| |||  |||||||||||||   ||||||||||| ||||||    
T  41903400 gataaatatctctttattacataaaaatgatcgataacttattaatttatgaaatagatatactggtacactttaatt 41903477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 43025189 - 43025112
Alignment:
Q  182 aaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactcc 259  Q
    ||||| ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||  | | ||||||||| |||||||    
T  43025189 aaaatgatctttaacttattgatttatgaaacaggtgtaccggtacaccttaatttaaagatgtaccgtaaaaactcc 43025112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 50239359 - 50239283
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    ||||||||| || |||||  |||| |||| |||| || |||||| ||||||||||||||   |||||||||||||||    
T  50239359 cataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaa 50239283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 70798 - 70694
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||||  |||||| |||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  70798 gtcgataaatatccgtttatcacataaaaattatagttaacttatagatttatgaaataggtgtactgatacaccttaattgaagggtgtaccgtagaaa 70699  T
Q  256 ctccc 260  Q
    |||||    
T  70698 ctccc 70694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 262929 - 262825
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| |||||||||||| ||||||||||||| ||| | ||||||||||||||||||| |||| | ||||||||||||| |||||||||||||||||    
T  262929 gtcgataaatatctctttatcacataaaaattatctttaccttatagatttatgaaataggtgtaccgatacaccttaattgaagggtgtaccgtagaaa 262830  T
Q  256 ctccc 260  Q
    |||||    
T  262829 ctccc 262825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 5802 - 5700
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| ||||  |||||| ||||||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||| ||| |||||||||||||    
T  5802 gtcgataaatatcagtttatcacataaaaattatctttaacttatagatttataaaataggtgtactggtacaccttaattgaaggatgtaccgtagaaa 5703  T
Q  256 ctc 258  Q
    |||    
T  5702 ctc 5700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 32715915 - 32716009
Alignment:
Q  166 atctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    ||||||||||  ||||||||| || |||||| ||| || |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  32715915 atctctttattacataaaaatgattgttaacttattgaattatgaaataggtgtactggtacaccttaatttaagggtgtaccgtagaaactccc 32716009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 22735007 - 22735108
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  ||||||||| |||| |||| ||| |||||||||||||||  ||||||||||| ||||||  |||||||||| |||||||||    
T  22735007 gataaatatctctttattacataaaaatgatcgataacttattgatttatgaaataggtatactggtacactttaatttaagggtgtaccatagaaactc 22735106  T
Q  259 cc 260  Q
    ||    
T  22735107 cc 22735108  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 10091793 - 10091890
Alignment:
Q  160 ataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaact 257  Q
    |||| |||| ||||||  ||||||||||||||||||  ||| ||||||||||||||| |||| |||||||| |||||  | |||||||||||||||||    
T  10091793 ataaatatcactttattacataaaaattatcgttaatttattgatttatgaaataggtgtaccggtacaccataatttaaaggtgtaccgtagaaact 10091890  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 5078452 - 5078553
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| |||||||||||  || |||||| |||| |||| |||  |||||||||||||| |||| ||||||| ||||||  |||||||||| |||||||||    
T  5078452 gataaatatctctttattacagaaaaatgatcgataacttatttatttatgaaataggtgtaccggtacactttaatttaagggtgtaccatagaaactc 5078551  T
Q  259 cc 260  Q
    ||    
T  5078552 cc 5078553  T

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Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 2198084 - 2198188
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaa 255  Q
    |||||||| || |||||| |  ||||||||| ||| ||||| ||| ||||||||||||||  |||| ||||||||||||||  | ||||||| |||||||    
T  2198084 gtcgataaatagctctttgttacataaaaatgatctttaacttattgatttatgaaatagatgtaccggtacaccttaatttaaaggtgtacagtagaaa 2198183  T
Q  256 ctccc 260  Q
    |||||    
T  2198184 ctccc 2198188  T

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Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 26611770 - 26611850
Alignment:
Q  156 gtcgataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaatt 236  Q
    |||||||| |||||||||||  ||||||||||||||||||| | || |||||||||| ||| |||| | ||||||||||||    
T  26611770 gtcgataaatatctctttattacataaaaattatcgttaacttgtaaatttatgaaacaggtgtaccgatacaccttaatt 26611850  T

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Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 33610796 - 33610702
Alignment:
Q  165 tatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactccc 260  Q
    |||||||||||  ||||||||| ||| ||||| ||| ||||||| ||||||| |||| |||||| |||| ||  ||||||||||||| ||||||||    
T  33610796 tatctctttattacataaaaataatcattaacatattgatttataaaataggtgtaccggtacatcttagtttaagggtgtaccgta-aaactccc 33610702  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 3448202 - 3448101
Alignment:
Q  159 gataagtatctctttatcgcataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaaactc 258  Q
    ||||| ||| |||||||  || |||||| |||| |||| ||| ||||||||||||||| |||| | ||||| ||||||  |||||||| | |||||||||    
T  3448202 gataaatatttctttattacagaaaaatgatcgataacttattgatttatgaaataggtgtaccgttacactttaatttaagggtgtatcatagaaactc 3448103  T
Q  259 cc 260  Q
    ||    
T  3448102 cc 3448101  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 15383285 - 15383209
Alignment:
Q  178 cataaaaattatcgttaacgtatagatttatgaaataggagtactggtacaccttaattgcagggtgtaccgtagaa 254  Q
    ||||||||| || |||||  || |||||| |||| ||||||||| ||||||||||||||   |||||||||||||||    
T  15383285 cataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgtagaa 15383209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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