View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3223_low_78 (Length: 295)
Name: NF3223_low_78
Description: NF3223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3223_low_78 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 35140644 - 35140920
Alignment:
| Q |
1 |
atgaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactattt |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
35140644 |
atgaagaagagttgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattctgccattctgggctggtaagtgctattt |
35140743 |
T |
 |
| Q |
101 |
catcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggaca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35140744 |
catcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggaca |
35140843 |
T |
 |
| Q |
201 |
tgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggactaaa |
277 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35140844 |
tgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggactaaa |
35140920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 6245050 - 6244779
Alignment:
| Q |
1 |
atgaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactattt |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6245050 |
atgaagaagagttgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggctggtaagtacaattt |
6244951 |
T |
 |
| Q |
101 |
catcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggaca |
200 |
Q |
| |
|
|||| ||||||||||| || |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6244950 |
catcatgcatgatcttgtccatgatttagcgacatcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggaca |
6244851 |
T |
 |
| Q |
201 |
tgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaagga |
272 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6244850 |
cgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcagattcataacattaaagga |
6244779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 3 - 275
Target Start/End: Complemental strand, 6258957 - 6258685
Alignment:
| Q |
3 |
gaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactatttca |
102 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6258957 |
gaagaagagttgggtaataaattcttcaatgatctagtgtcaatgtcttttttccaaccatcagcgattatgccattctgggctggtaagtactatttca |
6258858 |
T |
 |
| Q |
103 |
tcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacatg |
202 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6258857 |
tcatgcatgatcttatcaatgatttagcgacatcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacacg |
6258758 |
T |
 |
| Q |
203 |
tcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggacta |
275 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6258757 |
tcacatttggtgccgccttgatttggaagatggtgatagaaaactaaagcagattcataacattaaaggacta |
6258685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 13270825 - 13271099
Alignment:
| Q |
1 |
atgaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactattt |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
13270825 |
atgaagaagagttgggtaataaattcttcaatgatctagtgtcaatttcgtttttccaacaatcagcaattgtgccattctgggctggtaagtactattt |
13270924 |
T |
 |
| Q |
101 |
catcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggaca |
200 |
Q |
| |
|
|||| ||||||||||| || |||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13270925 |
catcatgcatgatcttgtccatgatttagcgacatcaatgtcaggggaattctgcttacgaatagagggtgtgaaagtgcaatatatccctcaaaggaca |
13271024 |
T |
 |
| Q |
201 |
tgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggacta |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13271025 |
cgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcagattcataacattaaaggacta |
13271099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 6168648 - 6168374
Alignment:
| Q |
1 |
atgaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactattt |
100 |
Q |
| |
|
|||||||||| ||||||||| ||||||| || |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6168648 |
atgaagaagagttgggtaatgaattctttgatcatctagtgtcaatgtcatttttccaacaatcagcaattatgccattatgggctggtaagtactattt |
6168549 |
T |
 |
| Q |
101 |
catcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggaca |
200 |
Q |
| |
|
|||| ||||||||||| || ||||||| || |||| || |||||||| | ||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
6168548 |
catcatgcatgatcttgccagtgatttagcgaaatcattgacaggagaatcccacttacgaatagagggtgataacgtgcaagatatccctcaaaggaca |
6168449 |
T |
 |
| Q |
201 |
tgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggacta |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||| |
|
|
| T |
6168448 |
cgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcagattcgtgacattaaaggacta |
6168374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 2 - 275
Target Start/End: Original strand, 6591626 - 6591899
Alignment:
| Q |
2 |
tgaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactatttc |
101 |
Q |
| |
|
||||||| | ||||| ||| ||||||||||| ||||||||||||| |||||||||||| |||||| || ||||||||| |||||||| ||| |||| ||| |
|
|
| T |
6591626 |
tgaagaaaagttgggcaatgaattcttcaatcatctagtgtcaatatcgtttttccaacaatcagtaactatgccattatgggctggcaagcactacttc |
6591725 |
T |
 |
| Q |
102 |
atcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacat |
201 |
Q |
| |
|
||| ||||||||||| ||||||||||| | |||| ||| ||||||||| ||||| ||||||||||| || ||||||||||||||| | |||||| |
|
|
| T |
6591726 |
atcatgcatgatcttgtcaatgatttagcaaaatcagtgtcaggagaattctgcttagaaatagagggtggcaacgtgcaagatatccctaataggacac |
6591825 |
T |
 |
| Q |
202 |
gtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggacta |
275 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |
|
|
| T |
6591826 |
gtcatatttggtgctgccttgatttggaagatggtgatagaaaactgaagcagattcataaaattaaaggacta |
6591899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 275
Target Start/End: Complemental strand, 6916857 - 6916584
Alignment:
| Q |
2 |
tgaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactatttc |
101 |
Q |
| |
|
||||||||| ||||||||| |||| |||||||||||||||||||| || ||||||||| ||||| |||||||||| ||||| |||||| |||| || |
|
|
| T |
6916857 |
tgaagaagagttgggtaatgaatttttcaatgatctagtgtcaatatcatttttccaacgatcagtaattatgccacgatgggcaggtaagcactacttt |
6916758 |
T |
 |
| Q |
102 |
atcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacat |
201 |
Q |
| |
|
|| ||||||||||| ||||||||||| | |||| ||| |||||||| ||||| ||||||||| ||| || ||||||||||||||| |||||||| |
|
|
| T |
6916757 |
gtcatgcatgatcttgtcaatgatttagcaaaatcagtgtcgggagaattccgcttccgaatagagagtgaaaacgtgcaagatatccctaaaaggacac |
6916658 |
T |
 |
| Q |
202 |
gtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggacta |
275 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
6916657 |
gtcatatttggtgctgccttgatttggaagatggtgatagaaaactaaagcagattcataaaattaaaggacta |
6916584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 275
Target Start/End: Complemental strand, 6142039 - 6141769
Alignment:
| Q |
5 |
agaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactatttcatc |
104 |
Q |
| |
|
|||||| || |||||| |||||||| || ||||||||||||| || ||||||||| |||||| |||||||||||| ||| ||||||||||||| |||| |
|
|
| T |
6142039 |
agaagagttaggtaatgaattcttcgattatctagtgtcaatatcatttttccaacaatcagtaattatgccattatggtctggtaagtactacttcact |
6141940 |
T |
 |
| Q |
105 |
gtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacatgtc |
204 |
Q |
| |
|
||||||||||| ||||||||||| || |||| || | |||||| ||||||||||| || |||| || |||||||||||| | |||||||| ||| |
|
|
| T |
6141939 |
atgcatgatcttgtcaatgatttagcgaaatcattgacaagagaatcccgcttacgaatcgaaggtgataacgtgcaagatatcaatgaaaggacacgtc |
6141840 |
T |
 |
| Q |
205 |
acatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggacta |
275 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6141839 |
acatttggtgttgccttgatttggaagatggtgatagaaaactaaagcatattcataacattaaaggacta |
6141769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 2 - 275
Target Start/End: Complemental strand, 6899844 - 6899571
Alignment:
| Q |
2 |
tgaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactatttc |
101 |
Q |
| |
|
||||||||| ||||||||| |||||||||| |||||||||||||| | |||||||| ||||| ||||||||||||| ||||||||||| ||||| ||| |
|
|
| T |
6899844 |
tgaagaagagttgggtaatgaattcttcaacgatctagtgtcaataacatttttccagcaatcaacaattatgccattatgggctggtaaatactacttc |
6899745 |
T |
 |
| Q |
102 |
atcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacat |
201 |
Q |
| |
|
||| ||||||||||| | |||||||| || || | ||| |||||||||||||||| |||||||||||| || |||||||||||||| ||||||| |
|
|
| T |
6899744 |
atcatgcatgatcttgtatatgatttagcgaaattagtgtcaggagaatttcgcttaagaatagagggtgataacctgcaagatatccctgaaaggacgc |
6899645 |
T |
 |
| Q |
202 |
gtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggacta |
275 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||| |||||| |
|
|
| T |
6899644 |
gccagatttggtgctgccttgatttggaagatggtgatagaaaactagagcatattcttaaaattaagggacta |
6899571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 274
Target Start/End: Complemental strand, 7749758 - 7749486
Alignment:
| Q |
2 |
tgaagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactatttc |
101 |
Q |
| |
|
||||||| | ||||||||| ||||||||||| ||||||||||||| |||||||||||| |||||| || |||||| || ||||||||||| ||||| ||| |
|
|
| T |
7749758 |
tgaagaacagttgggtaatgaattcttcaattatctagtgtcaatatcgtttttccaacaatcagtaactatgcctttatgggctggtaaatactacttc |
7749659 |
T |
 |
| Q |
102 |
atcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacat |
201 |
Q |
| |
|
||| || | |||||| ||||||||||| | |||| ||| |||||||| ||||| ||||||||| || || |||||||| |||||| ||||||| |
|
|
| T |
7749658 |
atcatgaacgatcttgtcaatgatttagcaaaatcagtgtcgggagaattctgcttaagaatagaggatggtaatgtgcaagaaatccctaaaaggacgc |
7749559 |
T |
 |
| Q |
202 |
gtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggact |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||| ||||| |
|
|
| T |
7749558 |
gtcacatttggtgctgccttgatttggaagatggtgatagaaaactagatcatattcataaaattaagggact |
7749486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 6265445 - 6265195
Alignment:
| Q |
4 |
aagaagaattgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactatttcat |
103 |
Q |
| |
|
||||||| || || ||| |||||||| || | |||||||||||||| ||||||||| |||||| | | |||||||| ||| | ||||||| ||| || || |
|
|
| T |
6265445 |
aagaagagttagggaatgaattcttcgatcaactagtgtcaatgtcatttttccaacaatcagtattgatgccattatggaccggtaagtgctactttat |
6265346 |
T |
 |
| Q |
104 |
cgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgctt------acgaatagagggtgtgaaagtgcaagatatccctcaaagg |
197 |
Q |
| |
|
| ||||||||||| ||||||||||| || |||| ||| |||||| || || || |||||||||||||| || || ||||||| ||| ||||| |
|
|
| T |
6265345 |
catgcatgatcttgtcaatgatttagcgaaatcagtgtcaggagagttccgattgcgaatacgaatagagggtgataacatgaaagatatacctaaaagg |
6265246 |
T |
 |
| Q |
198 |
acatgtcacatttggtgctgccttgatttggaagatggtgatagaaaacta |
248 |
Q |
| |
|
||| ||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6265245 |
acacgtcacgtatggtgctgccttgatttggaagatggtgatagaaaacta |
6265195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 6882247 - 6882134
Alignment:
| Q |
15 |
ggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattatgccattctgggctggtaagtactatttcatcgtgcatgatc |
114 |
Q |
| |
|
|||||| ||||||||||| || | |||||||| || ||||||||| |||||| |||||||||||| ||||||| || ||||| ||| || ||||||||| |
|
|
| T |
6882247 |
ggtaatgaattcttcaatcatttggtgtcaatatcttttttccaacaatcagtaattatgccattatgggctgacaaatactacttcgtcatgcatgatc |
6882148 |
T |
 |
| Q |
115 |
ttatcaatgattta |
128 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
6882147 |
ttgtcaatgattta |
6882134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 6722527 - 6722609
Alignment:
| Q |
177 |
gtgcaagatatccctcaaaggacatgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattca |
259 |
Q |
| |
|
|||||||||||| | |||||||| || ||||||||||||||||||||||| | |||||||| ||||||||| |||| ||||| |
|
|
| T |
6722527 |
gtgcaagatatctcagaaaggacacgtaacatttggtgctgccttgatttgaaggatggtgacagaaaactagagcatattca |
6722609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 6882070 - 6882026
Alignment:
| Q |
204 |
cacatttggtgctgccttgatttggaagatggtgatagaaaacta |
248 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6882070 |
cacatttggtgctgccttgattttgaagatggtgatagaaaacta |
6882026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 245
Target Start/End: Complemental strand, 5280305 - 5280166
Alignment:
| Q |
106 |
tgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacatgtca |
205 |
Q |
| |
|
||||||||||| ||| ||||||| | |||| ||| |||||||||| |||||||||||||||| | ||||||||||||||| |||| || | || |
|
|
| T |
5280305 |
tgcatgatcttgtcattgatttagcaagatcagtgtcaggagaattttctttacgaatagagggtgatagggtgcaagatatccctgaaagagcacgcca |
5280206 |
T |
 |
| Q |
206 |
catttggtgctgccttgatttggaagatggtgatagaaaa |
245 |
Q |
| |
|
|||||||||| ||||||| | || ||||| |||||||| |
|
|
| T |
5280205 |
tatttggtgctctcttgattggaaatatggttatagaaaa |
5280166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 5298297 - 5298236
Alignment:
| Q |
179 |
gcaagatatccctcaaaggacatgtcacatttggtgctgccttgatttggaagatggtgata |
240 |
Q |
| |
|
||||||||| ||| |||||||| ||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
5298297 |
gcaagatattcctgaaaggacacgtcacatttggtgctctcttgaattaaaagatggtgata |
5298236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 6573733 - 6573828
Alignment:
| Q |
148 |
aatttcgcttacgaatagagggtgtgaaagtgcaagatatccctcaaaggacatgtcacatttggtgctgccttgatttggaagatggtgatagaa |
243 |
Q |
| |
|
||||| |||||| ||| ||||||| | ||||||||||| || |||||||| |||| |||||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
6573733 |
aattttgcttacaaattgagggtgatagggtgcaagatatatctgaaaggacacgtcatatttggtgctcccttggtttggaagatggtgctagaa |
6573828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University