View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3226-Insertion-15 (Length: 765)
Name: NF3226-Insertion-15
Description: NF3226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3226-Insertion-15 |
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Alignment Details
Target: chr8 (Bit Score: 676; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 676; E-Value: 0
Query Start/End: Original strand, 6 - 693
Target Start/End: Original strand, 37696468 - 37697155
Alignment:
| Q |
6 |
catacataacatgcacatcaaatggaacattagaccaactcatcctcaaaactcacacatcctcataccctataacctccatttcatacaccacttccac |
105 |
Q |
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| T |
37696468 |
catacataacatgcacatcaaatggaacattagaccaactcatcctcaaaactcacacatcctcataccctataacctccatttcatacaccacttccac |
37696567 |
T |
|
| Q |
106 |
tctaatactcacaccaccctacatgtctacttgcactaccatgcaaacctcaccaaactttggcatagatttaactgcaccattccaaatatcttcctcc |
205 |
Q |
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| T |
37696568 |
tctaatactcacaccaccctacatgtctacttgcactaccatgcaaacctcaccaaactttggcatagatttaactgcaccattccaaatatcttcctcc |
37696667 |
T |
|
| Q |
206 |
actttcatcctcctctattgccaagtaaaaagttcaaccatttgtgacacttcttttgattacctttgtgcttctctttactcttgccctgaagtagtct |
305 |
Q |
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| T |
37696668 |
actttcatcctcctccattgccaagtaaaaagttcaaccatttgtgacacttcttttgattacctttgtgcttctctttactcttgccctgaagtagtct |
37696767 |
T |
|
| Q |
306 |
cacttggtatgcctcttttttctcctactaacacgtgttgtgtatactcaccggggaacctcgatggcaaaggggagttgaatcttagagagaatgactg |
405 |
Q |
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| T |
37696768 |
cacttggtatgcctcttttttctcctactaacacatgttgtgtatactcaccggggaacctcgatggcaaaggggagttgaatcttagagagaatgactg |
37696867 |
T |
|
| Q |
406 |
tagtggttatacttcggtcgtgtcacttggtgataaccctactgatcctactcattgggtttatggagtggcattgaaatatacacatggtgtttttgat |
505 |
Q |
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| T |
37696868 |
tagtggttatacttcggtcgtgtcacttggtgataaccctactgatcctactcattgggtttatggagtggcattgaaatatacacatggtgtttttgat |
37696967 |
T |
|
| Q |
506 |
gacattgtgaccactgagtgtactagttgtgagagtagtggtggtgtgtgtggatatgctcctccaggaagtggatttgtttgtgtttgtaaaagtggat |
605 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37696968 |
gacattgtgaccactaagtgtactagttgtgagagtagtggtggtgtgtgtggatatgctcctccaggaagtggatttgtttgtgtttgtaaaagtggat |
37697067 |
T |
|
| Q |
606 |
ataatactagccttgattgctctaattacgatcaaaaccaggatttcctttgggactccatctctcctcctcccatgtacaacggtac |
693 |
Q |
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| T |
37697068 |
ataatactagccttgattgctctaattacgatcaaaaccaggatttcctttgggactccatctctcctcctcccatgtacaacggtac |
37697155 |
T |
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