View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3226-Insertion-7 (Length: 924)

Name: NF3226-Insertion-7
Description: NF3226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3226-Insertion-7
NF3226-Insertion-7
[»] chr5 (28 HSPs)
chr5 (8-526)||(9818159-9818691)
chr5 (733-917)||(9818697-9818881)
chr5 (135-339)||(9855112-9855323)
chr5 (766-860)||(18851078-18851171)
chr5 (756-866)||(31906245-31906354)
chr5 (763-853)||(38845436-38845525)
chr5 (766-861)||(6951300-6951394)
chr5 (755-861)||(42858093-42858198)
chr5 (768-854)||(18637282-18637365)
chr5 (753-854)||(13171762-13171863)
chr5 (753-860)||(36639920-36640026)
chr5 (790-862)||(28110432-28110503)
chr5 (768-850)||(22572410-22572491)
chr5 (769-854)||(22226238-22226322)
chr5 (28-83)||(9855336-9855389)
chr5 (768-852)||(14299328-14299411)
chr5 (753-862)||(34250348-34250453)
chr5 (768-865)||(11648080-11648174)
chr5 (765-862)||(28031168-28031263)
chr5 (773-854)||(2937584-2937664)
chr5 (753-854)||(5468756-5468857)
chr5 (773-854)||(15368376-15368456)
chr5 (768-867)||(39097244-39097342)
chr5 (768-833)||(3738129-3738195)
chr5 (753-822)||(3970433-3970503)
chr5 (753-854)||(42439619-42439720)
chr5 (819-860)||(10898769-10898810)
chr5 (765-854)||(36290030-36290118)
[»] chr8 (32 HSPs)
chr8 (753-862)||(32927875-32927983)
chr8 (768-861)||(15677810-15677903)
chr8 (762-854)||(13384656-13384747)
chr8 (770-861)||(35494990-35495080)
chr8 (768-866)||(26100136-26100233)
chr8 (768-862)||(32994236-32994329)
chr8 (753-853)||(4662906-4663005)
chr8 (759-854)||(38868487-38868581)
chr8 (753-855)||(44141051-44141152)
chr8 (753-862)||(16972058-16972166)
chr8 (753-854)||(37684388-37684488)
chr8 (766-862)||(38335855-38335950)
chr8 (753-822)||(10367978-10368047)
chr8 (768-854)||(18355852-18355935)
chr8 (768-854)||(30098908-30098991)
chr8 (755-862)||(35495245-35495351)
chr8 (762-821)||(36200166-36200225)
chr8 (768-821)||(7244635-7244688)
chr8 (748-822)||(43024815-43024890)
chr8 (753-819)||(26668535-26668601)
chr8 (779-861)||(40848026-40848107)
chr8 (748-821)||(36679732-36679805)
chr8 (766-854)||(6027051-6027138)
chr8 (765-821)||(11572492-11572548)
chr8 (790-862)||(32736482-32736553)
chr8 (770-821)||(10378232-10378283)
chr8 (819-854)||(32681306-32681341)
chr8 (819-865)||(5859054-5859100)
chr8 (753-795)||(42455895-42455937)
chr8 (753-805)||(1836262-1836315)
chr8 (757-805)||(11791783-11791832)
chr8 (756-821)||(38537392-38537457)
[»] chr4 (50 HSPs)
chr4 (753-862)||(32818364-32818472)
chr4 (768-861)||(14596687-14596781)
chr4 (753-862)||(35065046-35065154)
chr4 (767-862)||(8604616-8604710)
chr4 (753-855)||(50061629-50061730)
chr4 (768-861)||(21691207-21691299)
chr4 (768-841)||(30357510-30357582)
chr4 (748-856)||(49138762-49138869)
chr4 (772-862)||(16551959-16552046)
chr4 (753-854)||(46344835-46344933)
chr4 (757-854)||(9064218-9064314)
chr4 (753-853)||(26617451-26617550)
chr4 (790-862)||(45011894-45011965)
chr4 (753-862)||(9134593-9134699)
chr4 (753-854)||(25927291-25927389)
chr4 (768-863)||(31012731-31012826)
chr4 (753-810)||(11271582-11271640)
chr4 (748-821)||(18597017-18597091)
chr4 (753-854)||(25319030-25319131)
chr4 (773-822)||(16643981-16644030)
chr4 (753-862)||(55927764-55927872)
chr4 (768-854)||(33456372-33456455)
chr4 (759-819)||(39733674-39733733)
chr4 (768-819)||(1616389-1616439)
chr4 (748-822)||(8330093-8330168)
chr4 (529-576)||(29718977-29719024)
chr4 (753-822)||(2206376-2206446)
chr4 (768-822)||(30357645-30357699)
chr4 (772-854)||(52965856-52965937)
chr4 (768-862)||(53713555-53713648)
chr4 (797-854)||(4243414-4243470)
chr4 (768-861)||(39386631-39386723)
chr4 (768-821)||(55186996-55187049)
chr4 (755-822)||(2206502-2206570)
chr4 (768-864)||(2326803-2326898)
chr4 (753-821)||(2635146-2635214)
chr4 (755-859)||(33347167-33347270)
chr4 (782-846)||(42971912-42971975)
chr4 (753-808)||(54705437-54705493)
chr4 (755-801)||(8283419-8283466)
chr4 (748-810)||(22683841-22683904)
chr4 (753-848)||(30889770-30889864)
chr4 (755-822)||(51093243-51093310)
chr4 (768-854)||(20718615-20718700)
chr4 (753-787)||(33843661-33843695)
chr4 (768-822)||(43571476-43571530)
chr4 (748-805)||(43628095-43628153)
chr4 (748-821)||(20712848-20712921)
chr4 (532-576)||(25329596-25329641)
chr4 (753-850)||(53913583-53913679)
[»] chr6 (31 HSPs)
chr6 (753-854)||(4910891-4910991)
chr6 (753-860)||(5724626-5724732)
chr6 (768-854)||(765390-765473)
chr6 (755-865)||(852517-852626)
chr6 (768-862)||(3482044-3482137)
chr6 (793-867)||(17225875-17225948)
chr6 (755-816)||(7952748-7952809)
chr6 (753-854)||(26280588-26280688)
chr6 (754-822)||(30927027-30927095)
chr6 (755-854)||(1485148-1485246)
chr6 (753-844)||(6654102-6654192)
chr6 (768-851)||(25195848-25195930)
chr6 (748-854)||(16540085-16540190)
chr6 (753-854)||(25195368-25195466)
chr6 (768-821)||(6895984-6896037)
chr6 (753-821)||(2234498-2234566)
chr6 (787-861)||(34910964-34911035)
chr6 (755-854)||(34620871-34620969)
chr6 (755-854)||(34748308-34748406)
chr6 (797-862)||(947594-947656)
chr6 (768-862)||(993956-994049)
chr6 (753-867)||(8854903-8855016)
chr6 (768-862)||(8860502-8860595)
chr6 (765-854)||(434239-434327)
chr6 (768-820)||(3436917-3436969)
chr6 (797-861)||(9505797-9505860)
chr6 (778-854)||(31305849-31305924)
chr6 (797-861)||(34027412-34027475)
chr6 (768-815)||(4907961-4908008)
chr6 (768-862)||(7280488-7280581)
chr6 (768-821)||(31725774-31725827)
[»] chr2 (30 HSPs)
chr2 (761-854)||(42740968-42741060)
chr2 (753-866)||(33019146-33019258)
chr2 (750-822)||(30503189-30503261)
chr2 (753-862)||(42982525-42982635)
chr2 (768-862)||(43501123-43501214)
chr2 (753-862)||(10644586-10644694)
chr2 (761-862)||(11504056-11504155)
chr2 (756-862)||(16518765-16518869)
chr2 (748-822)||(21659697-21659771)
chr2 (753-822)||(2002728-2002797)
chr2 (755-852)||(31453368-31453464)
chr2 (756-862)||(5977166-5977273)
chr2 (753-862)||(11510936-11511044)
chr2 (791-854)||(33502258-33502320)
chr2 (768-854)||(44439251-44439337)
chr2 (753-862)||(1976858-1976967)
chr2 (762-860)||(8800694-8800790)
chr2 (527-576)||(15216804-15216853)
chr2 (750-854)||(3352056-3352159)
chr2 (773-860)||(5533027-5533113)
chr2 (768-847)||(12037059-12037137)
chr2 (753-854)||(22535981-22536081)
chr2 (753-788)||(680344-680379)
chr2 (748-822)||(3476462-3476537)
chr2 (773-860)||(4779111-4779197)
chr2 (768-859)||(13912785-13912875)
chr2 (791-854)||(32596012-32596074)
chr2 (768-862)||(4894151-4894244)
chr2 (793-822)||(7630216-7630245)
chr2 (753-805)||(37561689-37561742)
[»] chr1 (36 HSPs)
chr1 (771-862)||(30557505-30557593)
chr1 (772-854)||(11049252-11049333)
chr1 (748-862)||(1514321-1514434)
chr1 (768-854)||(7790644-7790729)
chr1 (777-854)||(7524120-7524196)
chr1 (753-861)||(28083883-28083990)
chr1 (757-867)||(48549003-48549110)
chr1 (753-854)||(6021787-6021887)
chr1 (766-862)||(3016158-3016253)
chr1 (771-862)||(30850393-30850483)
chr1 (759-854)||(38797631-38797725)
chr1 (793-866)||(213527-213599)
chr1 (753-861)||(47321902-47322008)
chr1 (768-858)||(3416078-3416167)
chr1 (768-854)||(28287338-28287423)
chr1 (773-862)||(34915069-34915157)
chr1 (753-822)||(31362238-31362303)
chr1 (774-822)||(51500867-51500915)
chr1 (755-854)||(10324940-10325038)
chr1 (768-866)||(47553935-47554033)
chr1 (793-862)||(26373538-26373603)
chr1 (768-854)||(11817319-11817403)
chr1 (772-822)||(3515820-3515870)
chr1 (776-822)||(27849145-27849191)
chr1 (768-846)||(30996040-30996117)
chr1 (762-862)||(2099681-2099781)
chr1 (768-857)||(8381964-8382052)
chr1 (753-821)||(30220243-30220312)
chr1 (750-839)||(34387710-34387798)
chr1 (774-862)||(32370025-32370112)
chr1 (768-844)||(50571282-50571357)
chr1 (773-846)||(40662991-40663061)
chr1 (771-821)||(47892422-47892472)
chr1 (755-840)||(15986237-15986321)
chr1 (770-822)||(33693020-33693073)
chr1 (773-821)||(36780150-36780199)
[»] scaffold0005 (1 HSPs)
scaffold0005 (768-861)||(220597-220691)
[»] chr7 (18 HSPs)
chr7 (753-862)||(40491561-40491669)
chr7 (768-853)||(41386818-41386902)
chr7 (768-862)||(38123660-38123753)
chr7 (768-809)||(17111855-17111896)
chr7 (761-822)||(30182329-30182390)
chr7 (748-861)||(15903527-15903637)
chr7 (768-862)||(45557363-45557456)
chr7 (789-847)||(45997706-45997764)
chr7 (768-821)||(22195862-22195915)
chr7 (753-821)||(27571845-27571913)
chr7 (760-819)||(28725088-28725147)
chr7 (755-821)||(5489880-5489946)
chr7 (766-860)||(24109455-24109548)
chr7 (753-821)||(44856843-44856909)
chr7 (755-850)||(1410947-1411041)
chr7 (795-862)||(25156225-25156291)
chr7 (768-802)||(26984533-26984567)
chr7 (753-818)||(45005003-45005068)
[»] chr3 (28 HSPs)
chr3 (768-854)||(52364049-52364134)
chr3 (754-860)||(32523336-32523442)
chr3 (777-862)||(31708233-31708317)
chr3 (768-854)||(4526130-4526215)
chr3 (753-862)||(25359568-25359676)
chr3 (753-857)||(35058344-35058448)
chr3 (766-821)||(35058063-35058118)
chr3 (783-862)||(52141242-52141320)
chr3 (748-862)||(37335028-37335141)
chr3 (748-857)||(40736537-40736644)
chr3 (773-866)||(31013021-31013113)
chr3 (755-820)||(40147885-40147950)
chr3 (753-809)||(7717367-7717423)
chr3 (753-812)||(1441424-1441483)
chr3 (787-854)||(46853536-46853602)
chr3 (756-822)||(44771680-44771746)
chr3 (773-822)||(42375528-42375577)
chr3 (773-822)||(42404242-42404291)
chr3 (773-844)||(31492770-31492839)
chr3 (753-821)||(44958640-44958708)
chr3 (753-862)||(5406889-5406995)
chr3 (773-860)||(27266790-27266876)
chr3 (753-857)||(44463557-44463662)
chr3 (768-821)||(32111992-32112046)
chr3 (753-862)||(35264405-35264513)
chr3 (768-821)||(40339224-40339278)
chr3 (768-821)||(41115395-41115449)
chr3 (793-862)||(41596143-41596211)
[»] scaffold0168 (1 HSPs)
scaffold0168 (748-821)||(31804-31877)
[»] scaffold0024 (1 HSPs)
scaffold0024 (753-854)||(23595-23695)
[»] scaffold0361 (1 HSPs)
scaffold0361 (768-862)||(14108-14200)


Alignment Details
Target: chr5 (Bit Score: 429; Significance: 0; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 8 - 526
Target Start/End: Original strand, 9818159 - 9818691
Alignment:
Q  8 acgttcataatctcaaccagttgc-------cactgatcagtctaacccaaagttatatgatggaatgtcatctgtttaatccattggtagggactataa 100  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9818159 acgttcataatctcaaccagttgccacttgccactgatcagtctaacccaaagttatatgatggaatgtcatctgtttaatccattggtagggactgtaa 9818258  T
Q  101 ccctctttgtagggaaatggaaagttgaaaatgtattcgactacatgtatattatttagtacataataccattggtagggactgtaaccctcttggtatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9818259 ccctctttgtagggaaatggaaagttgaaaatgtattcgactacatgtatattatttagtacataataccattggtagggactgtaaccctcttggtatg 9818358  T
Q  201 gaaatgaaaagtaaaaaatgtattcaaatttcatatatatcagacactaaattaccaaagttacgtaatatcagttgctatgctacaggtggagatc--- 297  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  9818359 gaaatggaaagttaaaaatgtattcaaatttcatatatatcagacactaaattaccaaagttacgtaatatcagttgctatgctacaggtggagatcaac 9818458  T
Q  298 ----acaatttgttcattaccgtgttttgaacaaaataagagatgacgacgtttaaagtatctagtcgttgttttattttatccgcttctgttgtataga 393  Q
        ||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9818459 agcaacaatctgttcattaccgtgttttaaacaaaataagagatgacgatgtttaaagtatctagtcgttgttttattttatccgattctgttgtataga 9818558  T
Q  394 gaccttagttataccacctttggtaaatatttgttcaattccatcaatagaaacagaattagctatgtaagaagattgctgagcaacatgattttcggag 493  Q
     ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  9818559 aaccttagttatgccacctttggtaaatatttgttcatttccatcaatagaaacagaatcagctatgcaagaagattcctgagcaacatgattttcggag 9818658  T
Q  494 atgatggaggatgaccatccccaattacttata 526  Q
    |||||||||||||||||||||||||||||||||    
T  9818659 atgatggaggatgaccatccccaattacttata 9818691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 733 - 917
Target Start/End: Original strand, 9818697 - 9818881
Alignment:
Q  733 aatggttaacacacaaaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaa 832  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9818697 aatggttaacacacaaaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaa 9818796  T
Q  833 tttatagttcaactcacttttatatgaatgcatcagttatctcactttactttcaactaatcactttagtaagaatcaattcact 917  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9818797 tttatagttcaactcacttttatatgaatgcatcaattatctcactttactttcaactaatcactttagtaagaatcaattcact 9818881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 135 - 339
Target Start/End: Complemental strand, 9855323 - 9855112
Alignment:
Q  135 attcgactacatgtatattatttagtacataataccattggtagggactgtaaccctcttggt----atggaaatgaaaagtaaaaaatgtattcaaatt 230  Q
    |||| ||||||||||||||||| |||||||||||| ||| ||||||| ||||| |||||||||    | |||  || ||||| |||  ||||||||||||    
T  9855323 attcaactacatgtatattatt-agtacataatac-attagtagggattgtaatcctcttggtgataaaggagctgtaaagttaaa--tgtattcaaatt 9855228  T
Q  231 tcatatatatcagacactaaattaccaaagttacgtaatatcagttgctatgctacaggtggagatc-------acaatttgttcattaccgtgttttga 323  Q
    |||||||||||| | || ||||||| ||||||| |||||||||||||||||  ||||||||||||||       ||||||||||| ||||| |||||| |    
T  9855227 tcatatatatcatataccaaattacaaaagttatgtaatatcagttgctattttacaggtggagatcgaatgcaacaatttgttcgttaccttgttttta 9855128  T
Q  324 acaaaataagagatga 339  Q
    ||||||||||||||||    
T  9855127 acaaaataagagatga 9855112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 766 - 860
Target Start/End: Complemental strand, 18851171 - 18851078
Alignment:
Q  766 ataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaa 860  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||| |||||||||| |||||||||||| |||||    
T  18851171 ataattgattctacttgaagctatgatttgtagcttttgattatagaattga-ttttcacacacatatttatagttaaactcacttttacatgaa 18851078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 756 - 866
Target Start/End: Original strand, 31906245 - 31906354
Alignment:
Q  756 ttttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttat 855  Q
    |||| |||| |||||||||| ||||||||||||||||||||| ||||||||| || ||||||| ||||  | | |||||||||||||||||||||||||     
T  31906245 ttttacctctataattgattttacttgaagctatgatttgtaacttttgattatataattgatatttt-catataaatttatagttcaactcacttttac 31906343  T
Q  856 atgaatgcatc 866  Q
    |||||| ||||    
T  31906344 atgaattcatc 31906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 763 - 853
Target Start/End: Original strand, 38845436 - 38845525
Alignment:
Q  763 tccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttt 853  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| | |||||||| ||||||| |||||||||||    
T  38845436 tccaaaattgattctacttgaagctaagatttgtagtttttgattctagaattga-ttttcacacacaaatatatagttaaactcactttt 38845525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 766 - 861
Target Start/End: Complemental strand, 6951394 - 6951300
Alignment:
Q  766 ataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    |||||||||||||||||||| || ||||||||||||||||||||| |||||| ||| || ||| ||||||||| ||||| ||||||||| ||||||    
T  6951394 ataattgattctacttgaagttaggatttgtagcttttgattctataattga-tttgtacacataaatttataattcaattcacttttacatgaat 6951300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 755 - 861
Target Start/End: Original strand, 42858093 - 42858198
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||| ||| | |||||||| ||||||||| || |||||| ||||||| |||||| ||||||||||  | |||||||||||||||||||||||||||||    
T  42858093 attttgactctagaattgattttacttgaagttaggatttggagcttttaattctataattgattttc-acacacaaatttatagttcaactcactttta 42858191  T
Q  855 tatgaat 861  Q
     ||||||    
T  42858192 catgaat 42858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 768 - 854
Target Start/End: Original strand, 18637282 - 18637365
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||||||||||||   ||||| ||||||||||||||||| |||||    
T  18637282 aattgattccacttgaagctaagataagtagcttttgattctagaattgattttt---acacacatttatagttcaactcaatttta 18637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 753 - 854
Target Start/End: Complemental strand, 13171863 - 13171762
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||||| ||||||||||||||||||  | ||||||||  ||||||||||| || |||||||| | ||| |||||||||||| |||||| |||    
T  13171863 tgattctgcctccaaaattgattctacttgaagaaaagatttgtaaattttgattctataaatgatttttcatacaaaaatttatagttaaactcaattt 13171764  T
Q  853 ta 854  Q
    ||    
T  13171763 ta 13171762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 753 - 860
Target Start/End: Original strand, 36639920 - 36640026
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||||| ||| ||||||||||||||||   | ||||||||| | |||||||||||| ||||||| || ||||||||  ||||| ||||||||    
T  36639920 tgattttgcctccaaaatagattctacttgaagctggaaattgtagcttctaattctagaattg-ttttttacactcaaatttaatgttcacctcacttt 36640018  T
Q  853 tatatgaa 860  Q
    || |||||    
T  36640019 tacatgaa 36640026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 790 - 862
Target Start/End: Complemental strand, 28110503 - 28110432
Alignment:
Q  790 gatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||| ||||||||| |||||||||||||  | |||||||||||||||| ||||||||||||||| ||||    
T  28110503 gatttgtaacttttgattttagaattgattttc-acacacaaatttatagttgaactcacttttatataaatg 28110432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 768 - 850
Target Start/End: Complemental strand, 22572491 - 22572410
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcact 850  Q
    |||||||| | |||||||||  |||||||||||||||||| |||||||||  ||||| | |||||||||||||| ||||||||    
T  22572491 aattgattgttcttgaagctgggatttgtagcttttgattatagaattga-attttataaacaaatttatagtttaactcact 22572410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 854
Target Start/End: Complemental strand, 22226322 - 22226238
Alignment:
Q  769 attgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||||||| |  ||||| ||||||||||| ||||| ||| |||||||    
T  22226322 attgattctacttgaagatagtatttgtagcttttgattttagaatt-aacttttacacacaaatttagagttcgactaactttta 22226238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 9855389 - 9855336
Alignment:
Q  28 ttgccactgatcagtctaacccaaagttatatgatggaatgtcatctgtttaatcc 83  Q
    ||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||    
T  9855389 ttgccactgattagtctaacccaaagt--tatgatggaatgccatctgtttaatcc 9855336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 768 - 852
Target Start/End: Original strand, 14299328 - 14299411
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||||||||| || ||||||||| |||| ||||||||||||  |||| | ||| ||||||||||||| | |||||||    
T  14299328 aattgattctacttgaagttaggatttgtagttttttattctagaattg-gttttcacacataaatttatagttcgattcacttt 14299411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 753 - 862
Target Start/End: Complemental strand, 34250453 - 34250348
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||| | |||||||||||||||| ||||  | |||||||||||||||||| |||||   ||||  |||||||||| | |||||||| |||||    
T  34250453 tgattatgcctctagaattgattctacttgatgctagaaattgtagcttttgattctacaattg---tttttcacacaaattttttgttcaacttacttt 34250357  T
Q  853 tatatgaatg 862  Q
    | ||||||||    
T  34250356 t-tatgaatg 34250348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 768 - 865
Target Start/End: Original strand, 11648080 - 11648174
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgcat 865  Q
    ||||||||||||||||||||| ||||||||  |||||||| || |||||| |||| | |||| ||  |||| ||||||||| ||||| ||||||||||    
T  11648080 aattgattctacttgaagctaagatttgtacattttgattataaaattga-ttttcacacacgaa--tataattcaactcaattttacatgaatgcat 11648174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 765 - 862
Target Start/End: Complemental strand, 28031263 - 28031168
Alignment:
Q  765 cataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||| |||||| ||  |||| ||  |||||||| || |||||| ||||  ||||||||||||||| |||||| ||||||| |||||||    
T  28031263 cataattgattctatttgaagttaaaatttatattttttgattatataattgactttt--aacacaaatttatagatcaacttacttttacatgaatg 28031168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 773 - 854
Target Start/End: Complemental strand, 2937664 - 2937584
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||| ||||||  ||||||||| ||||||||||||||||| || | | ||||||||||||| ||| ||||| |||||    
T  2937664 attctacttaaagctactatttgtagcctttgattctagaattga-ttataacacacaaatttatatttctactcattttta 2937584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 854
Target Start/End: Original strand, 5468756 - 5468857
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||||||| ||||||||||||||  ||| ||||| ||  |||| ||| || ||||   |||| | ||||||||||||||||||||||| |||    
T  5468756 tgattctgcctccatatttgattctacttgagactaggatttataatttttaattttataatttgattttcatacacaaatttatagttcaactcatttt 5468855  T
Q  853 ta 854  Q
    ||    
T  5468856 ta 5468857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 773 - 854
Target Start/End: Original strand, 15368376 - 15368456
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||||||||  | ||||| ||||||||| ||||||||| || | | ||||||||||||| ||||||||| |||||    
T  15368376 attctacttgaagctactagttgtaacttttgattatagaattga-ttctaacacacaaatttataattcaactcagtttta 15368456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 867
Target Start/End: Original strand, 39097244 - 39097342
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgcatca 867  Q
    |||||||||||||||||||||  ||||||| ||||| ||| || |||||| |||| | ||| ||||||| ||||||||  ||||||| || |||| ||||    
T  39097244 aattgattctacttgaagctaaaatttgtaacttttaattatataattga-ttttcacacataaatttaaagttcaacctacttttacataaatgaatca 39097342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 833
Target Start/End: Complemental strand, 3738195 - 3738129
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt-taaacacaaat 833  Q
    ||||||||||| |||||| ||  | |||||| ||||||||||| ||||||||||| |||||||||||    
T  3738195 aattgattctagttgaagttagaagttgtagtttttgattctataattgatttttataaacacaaat 3738129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 822
Target Start/End: Complemental strand, 3970503 - 3970433
Alignment:
Q  753 tgattttgcctccataattgattctact-tgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||||||||||| ||||||||||| | |||||||| || ||||||||||||| || | | |||||||||    
T  3970503 tgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgattttt 3970433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 854
Target Start/End: Complemental strand, 42439720 - 42439619
Alignment:
Q  753 tgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactt 851  Q
    ||||||| |||||| ||||||||||| ||||||||||  || |||||||||||| |||| |  |||||||| | ||  || ||||| |||||||||||||    
T  42439720 tgatttttcctccagaattgattctaacttgaagctagaatctgtagcttttgagtctaaacgtgattttt-acactaaattttatcgttcaactcactt 42439622  T
Q  852 tta 854  Q
    |||    
T  42439621 tta 42439619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 819 - 860
Target Start/End: Original strand, 10898769 - 10898810
Alignment:
Q  819 tttttaaacacaaatttatagttcaactcacttttatatgaa 860  Q
    |||||| |||||||||||| |||||||||||||||| |||||    
T  10898769 tttttacacacaaatttattgttcaactcacttttacatgaa 10898810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 765 - 854
Target Start/End: Original strand, 36290030 - 36290118
Alignment:
Q  765 cataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||| ||||||||| || |||||||   ||||||||| | | |||| |||| | ||||| ||||||||||||||||| |||||    
T  36290030 cataattgattatacttgaagttaagatttgttagttttgattccatatttga-ttttcagacacatatttatagttcaactcagtttta 36290118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 2e-33; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 753 - 862
Target Start/End: Original strand, 32927875 - 32927983
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||    
T  32927875 tgattttgcctcaatagttgattctacttgaagctaggatttgtagcttttgattatagaattca-tttttacacacaaatttatagttcaactcacttt 32927973  T
Q  853 tatatgaatg 862  Q
    || |||||||    
T  32927974 tacatgaatg 32927983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 768 - 861
Target Start/End: Complemental strand, 15677903 - 15677810
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||| ||||||    
T  15677903 aattgattctacttgaagctaggatttatagcttttgattatagaattgattttttacacacaaatttatagttcaactcattgttacatgaat 15677810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 762 - 854
Target Start/End: Complemental strand, 13384747 - 13384656
Alignment:
Q  762 ctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  13384747 ctccaaaattgattctatttgaagctaaaatttgtagcttttgattctagaattga-ttttcacacacaaatttatagttcaactcactttta 13384656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 770 - 861
Target Start/End: Original strand, 35494990 - 35495080
Alignment:
Q  770 ttgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||||| ||||||    
T  35494990 ttgattctacatgaagctaggatttgtagcttttgattctagaattg-ttttttacacacaaatctatagttcaacttacttttacatgaat 35495080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 768 - 866
Target Start/End: Complemental strand, 26100233 - 26100136
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgcatc 866  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||| || ||||||||    
T  26100233 aattggttctatttgaagctaggatttgtagcttttgattctataattgat-ttttacacacaaatttatggttcaactcacttttacataaatgcatc 26100136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 768 - 862
Target Start/End: Complemental strand, 32994329 - 32994236
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||| ||| | ||||||| |||||||    
T  32994329 aattgattctacttgaagctatgatttctagcttttgagtctagaattgat-ttttatacacaaatttatagtgcaaatgacttttacatgaatg 32994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 753 - 853
Target Start/End: Complemental strand, 4663005 - 4662906
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||||||| |||  |||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||| ||||    
T  4663005 tgattttgcatccggaatttattctacttgaagctaggatttgtagcttttgtttctagaattgat-ttttacacacaaatgtatagttcaactcgcttt 4662907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 759 - 854
Target Start/End: Original strand, 38868487 - 38868581
Alignment:
Q  759 tgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||| | ||||||||||||||||||||||| |||||    
T  38868487 tgcctctaaaattgattctacttgaagctaagatttgtagcttttggttctataattga-ttttcacacacaaatttatagttcaactcaatttta 38868581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 753 - 855
Target Start/End: Complemental strand, 44141152 - 44141051
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||| |||| |||| | ||| || ||||||||||||||| ||||    
T  44141152 tgattttgcctccaaaattgattctacttgaagttaggatttgtagtttttgattctagagttga-ttttcacacataattttatagttcaactcgcttt 44141054  T
Q  853 tat 855  Q
    |||    
T  44141053 tat 44141051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 753 - 862
Target Start/End: Complemental strand, 16972166 - 16972058
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||||||||| || | |||||| || |||||||||  |||||||| |||| ||| |||||||||||||| |||||||||||||| |||||| |||||||    
T  16972166 tgattttgccttcagagttgattgtatttgaagctagaatttgtagtttttaattttagaattgattttt-aaacacaaatttattgttcaaatcacttt 16972068  T
Q  853 tatatgaatg 862  Q
    || |||||||    
T  16972067 tacatgaatg 16972058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 753 - 854
Target Start/End: Original strand, 37684388 - 37684488
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||| ||||| |||||||||||||||||| || ||||||| ||||||||||||| ||||||||||  |  || ||||||||| |||||||||||||    
T  37684388 tgattttgtctccagaattgattctacttgaagttaggatttgtggcttttgattctaaaattgatttta-atgcaaaaatttataattcaactcacttt 37684486  T
Q  853 ta 854  Q
    ||    
T  37684487 ta 37684488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 766 - 862
Target Start/End: Complemental strand, 38335950 - 38335855
Alignment:
Q  766 ataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    ||||||||||| | ||||||||| ||||||| |||||||||| |||||||||| |||||  |||||||||||| |  |||||||||||| |||||||    
T  38335950 ataattgattccagttgaagctaagatttgttgcttttgattttagaattgat-ttttacgcacaaatttatattctaactcacttttacatgaatg 38335855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 753 - 822
Target Start/End: Original strand, 10367978 - 10368047
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||| ||||||| ||||| |||||||||| |||| |||||| ||||||||||||||||||| ||||||    
T  10367978 tgatttcgcctccacaattggttctacttgaggctaggatttgcagcttttgattctagaattcattttt 10368047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 768 - 854
Target Start/End: Complemental strand, 18355935 - 18355852
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||  ||||||||| |||||||  |||||||||||| |||||||||||   ||||||||||| |||||||||| ||||||    
T  18355935 aattgattctgattgaagctaggatttgtgtcttttgattctaaaattgattttt---acacaaatttaaagttcaactccctttta 18355852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 768 - 854
Target Start/End: Original strand, 30098908 - 30098991
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||| || |||||||||  |||||||||||| |||||||||||| ||||||   ||| |||||||||||| ||||||||||||    
T  30098908 aattgattttatttgaagctagaatttgtagctttcgattctagaattaattttt---acaaaaatttatagtttaactcactttta 30098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 755 - 862
Target Start/End: Original strand, 35495245 - 35495351
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||| | |||||||||||||||||||||   | | ||| || |||||||| |||||| |||||| || ||||||||| |||||| |||||||||    
T  35495245 attttgcctctagaattgattctacttgaagctacactatctagattctgattctataattga-tttttatactcaaatttattgttcaaatcactttta 35495343  T
Q  855 tatgaatg 862  Q
    | ||||||    
T  35495344 tttgaatg 35495351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 762 - 821
Target Start/End: Complemental strand, 36200225 - 36200166
Alignment:
Q  762 ctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||| ||||||||| |||||||| |||||||||| | ||||||||||||||||||||||    
T  36200225 ctccagaattgattcaacttgaagttatgatttgtcgattttgattctagaattgatttt 36200166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 768 - 821
Target Start/End: Complemental strand, 7244688 - 7244635
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||||||||||||||| ||| ||| ||||| ||||||||||||||||||||||    
T  7244688 aattgattctacttgaaactaagatatgtagtttttgattctagaattgatttt 7244635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 748 - 822
Target Start/End: Original strand, 43024815 - 43024890
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaag-ctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||| |||||||||||  | |||||||| ||||||||  |||||||||||||||| |||||||| |||||||||||    
T  43024815 aaaattgattttgcctgtagaattgattatacttgaaaactatgatttgtagcttgtgattctaaaattgattttt 43024890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 819
Target Start/End: Original strand, 26668535 - 26668601
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatt 819  Q
    ||||| ||||||||||||||||||||||| || |||  |||||||| |||| |||||| ||||||||    
T  26668535 tgattctgcctccataattgattctacttaaaactacaatttgtagttttttattctataattgatt 26668601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 779 - 861
Target Start/End: Original strand, 40848026 - 40848107
Alignment:
Q  779 cttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    ||||||||||| |||| || ||||||||| ||||||||| |||| | ||||||| ||||| || |||||| ||||||||||||    
T  40848026 cttgaagctataatttatatcttttgattttagaattga-ttttcacacacaaacttataattaaactcatttttatatgaat 40848107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 748 - 821
Target Start/End: Original strand, 36679732 - 36679805
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||| ||||||||| ||||||||| |||| | || ||| ||||||||||| ||| ||||||| |||||||||||    
T  36679732 aaaagtgattttgcttccataattaattcaatttaaagttatgatttgtaacttctgattctggaattgatttt 36679805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 766 - 854
Target Start/End: Complemental strand, 6027138 - 6027051
Alignment:
Q  766 ataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||||||||| || ||   | |||||||||||||||||||||||| |||| | | ||||||||| |||| |||||| |||||    
T  6027138 ataattgattctacttgtagttaaagtatgtagcttttgattctagaattga-ttttcatatacaaatttacagtttaactcattttta 6027051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 765 - 821
Target Start/End: Complemental strand, 11572548 - 11572492
Alignment:
Q  765 cataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||||||||| ||||||||||||  |||||||| |||||||| || ||||||||||    
T  11572548 cataattgattatacttgaagctaaaatttgtagattttgattataaaattgatttt 11572492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 790 - 862
Target Start/End: Original strand, 32736482 - 32736553
Alignment:
Q  790 gatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    ||||||||| |||| ||| || |||| |||||| | ||||||||||||||||||| ||||||||| |||||||    
T  32736482 gatttgtagttttttattttaaaattaattttt-acacacaaatttatagttcaattcacttttacatgaatg 32736553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 821
Target Start/End: Complemental strand, 10378283 - 10378232
Alignment:
Q  770 ttgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||||||||||| || ||||||||||||| |||| ||| |||||||||||||    
T  10378283 ttgattctacttaaaactatgatttgtaggttttaattttagaattgatttt 10378232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 819 - 854
Target Start/End: Complemental strand, 32681341 - 32681306
Alignment:
Q  819 tttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||||||||||| |||||||||||||||    
T  32681341 tttttaaacacaaatttataattcaactcactttta 32681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 819 - 865
Target Start/End: Complemental strand, 5859100 - 5859054
Alignment:
Q  819 tttttaaacacaaatttatagttcaactcacttttatatgaatgcat 865  Q
    |||||| |||||| ||||| |||||||||||||||| ||||||||||    
T  5859100 tttttacacacaattttatggttcaactcacttttacatgaatgcat 5859054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 795
Target Start/End: Original strand, 42455895 - 42455937
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttg 795  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||    
T  42455895 tgattctgcctccataattgattctacttgatgctataatttg 42455937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 805
Target Start/End: Complemental strand, 1836315 - 1836262
Alignment:
Q  753 tgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttga 805  Q
    |||||||||||| | ||||||||||| |||||||||| ||| ||||||||||||    
T  1836315 tgattttgcctctaaaattgattctaacttgaagctaggatgtgtagcttttga 1836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 805
Target Start/End: Complemental strand, 11791832 - 11791783
Alignment:
Q  757 tttgcctccataattgattctac-ttgaagctatgatttgtagcttttga 805  Q
    ||||||||||||| ||||||||| || |||||| ||||||||||||||||    
T  11791832 tttgcctccataactgattctaccttcaagctaggatttgtagcttttga 11791783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 756 - 821
Target Start/End: Complemental strand, 38537457 - 38537392
Alignment:
Q  756 ttttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||||||||| ||||| |||||||||||||||  |  |||| ||| |||||||||| ||||||||    
T  38537457 ttttgcctccaaaattgtttctacttgaagctagaaactgtaccttctgattctagagttgatttt 38537392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 4e-31; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 753 - 862
Target Start/End: Complemental strand, 32818472 - 32818364
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||    
T  32818472 tgattttgcctccagaattgattctatttgaagctagaatttgtagcttttgattctagaattgat-ttttgcacacaaatttatagttcaactaacttt 32818374  T
Q  853 tatatgaatg 862  Q
    || |||||||    
T  32818373 tacatgaatg 32818364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 768 - 861
Target Start/End: Original strand, 14596687 - 14596781
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt-taaacacaaatttatagttcaactcacttttatatgaat 861  Q
    ||||||||||||||||||||||| |||| || |||||||||||||||||||||||  | ||| ||||||||||||||| ||||||||||||||||    
T  14596687 aattgattctacttgaagctatgttttgcagtttttgattctagaattgatttttagatacaaaaatttatagttcaattcacttttatatgaat 14596781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 753 - 862
Target Start/End: Original strand, 35065046 - 35065154
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||| |||||||||| ||||||||||||  ||||||  ||||||||||||||||||| |||||| |||||||||||||  || |||||||||    
T  35065046 tgattttgcctcaataattgattttacttgaagctagtatttgtgacttttgattctagaattga-tttttacacacaaatttatatctccactcacttt 35065144  T
Q  853 tatatgaatg 862  Q
    || |||||||    
T  35065145 tacatgaatg 35065154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 767 - 862
Target Start/End: Complemental strand, 8604710 - 8604616
Alignment:
Q  767 taattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||| | |||||||||||||||| ||  |||||||| |||||||    
T  8604710 taattgattctacttgaagctaagatttgtagctttcgattctagaattga-ttttcacacacaaatttatagttgaatgcacttttacatgaatg 8604616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 753 - 855
Target Start/End: Complemental strand, 50061730 - 50061629
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||| |||| |||| | ||| || ||||| ||||||||| ||||    
T  50061730 tgattttgcctccaaaattgattctacttgaagttaggatttgtagtttttgattctagagttga-ttttcacacataattttatggttcaactcgcttt 50061632  T
Q  853 tat 855  Q
    |||    
T  50061631 tat 50061629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 768 - 861
Target Start/End: Complemental strand, 21691299 - 21691207
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    ||||||||| ||||||| ||| ||||||||||||||| || ||||||||| |||| | |||||||||||||||||||| |||||||| ||||||    
T  21691299 aattgattcaacttgaaactaagatttgtagcttttggttgtagaattga-ttttcacacacaaatttatagttcaacacacttttacatgaat 21691207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 768 - 841
Target Start/End: Original strand, 30357510 - 30357582
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagtt 841  Q
    |||||||||||||||||||| ||||||||||||||||||| || |||||| |||||| ||||||||||||||||    
T  30357510 aattgattctacttgaagctgtgatttgtagcttttgattatataattga-tttttacacacaaatttatagtt 30357582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 748 - 856
Target Start/End: Complemental strand, 49138869 - 49138762
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactc 847  Q
    |||| |||||||||||||| | || |||||||||||||||| |||||||| |||||||||||| ||||||| ||||| ||||||  ||||||||||||||    
T  49138869 aaaattgattttgcctccaaactt-attctacttgaagctaggatttgtaacttttgattctaaaattgat-ttttatacacaagcttatagttcaactc 49138772  T
Q  848 -acttttata 856  Q
     |||||||||    
T  49138771 aacttttata 49138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 772 - 862
Target Start/End: Original strand, 16551959 - 16552046
Alignment:
Q  772 gattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||| |||||||||| ||||||||| ||||  ||||||||||||||||    ||||||||||||||||||||||||||||| |||||||    
T  16551959 gattctccttgaagctaggatttgtagtttttagttctagaattgattttc---acacaaatttatagttcaactcacttttacatgaatg 16552046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 753 - 854
Target Start/End: Complemental strand, 46344933 - 46344835
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||||||||||||||||| ||||||||||||| ||  ||||  ||||||||||||| ||| ||||||||  |||||||||||| ||||| |||||||||    
T  46344933 tgattttgcctccataatt-attctacttgaagttagaatttccagcttttgattctggaagtgattttt--aacacaaatttaaagttcgactcacttt 46344837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 757 - 854
Target Start/End: Original strand, 9064218 - 9064314
Alignment:
Q  757 tttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||| ||||||||||||||||||||| |||  |||||||| |||||||||||||||||| |||| | || ||| ||||  ||||||||||||||||    
T  9064218 tttgccaccataattgattctacttgaaactagaatttgtagtttttgattctagaattga-ttttcacactcaagtttacggttcaactcactttta 9064314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 753 - 853
Target Start/End: Original strand, 26617451 - 26617550
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||||| || ||||||||||||||||||  || |||||||||||||| || |||||| |||||| | | ||||||||| ||||||||| |||    
T  26617451 tgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattga-tttttatagataaatttataattcaactcagttt 26617549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 790 - 862
Target Start/End: Original strand, 45011894 - 45011965
Alignment:
Q  790 gatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||||||||||||||||| |||| | ||||||||||||| ||  |||||||||||||||||||    
T  45011894 gatttgtagcttttgattctagaattga-ttttcacacacaaatttataattttactcacttttatatgaatg 45011965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 753 - 862
Target Start/End: Original strand, 9134593 - 9134699
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||||| | |||| ||||||| |||||||||||||  ||||||||||||||||| |||||||||||||    |||||||||||||| |||| |  ||||    
T  9134593 tgattttacttccagaattgatcctacttgaagctaaaatttgtagcttttgattttagaattgatttt---cacacaaatttatagctcaatttgcttt 9134689  T
Q  853 tatatgaatg 862  Q
    || |||||||    
T  9134690 taaatgaatg 9134699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 753 - 854
Target Start/End: Original strand, 25927291 - 25927389
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||||||||||||||||| ||| || || |||||||||||| |||||  |||||||||||||   ||| |||||||| | |||| |||||||    
T  25927291 tgattatgcctccataattgattctatttggagttaagatttgtagcttatgatttcagaattgattttt---acataaatttatggctcaattcacttt 25927387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 768 - 863
Target Start/End: Complemental strand, 31012826 - 31012731
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgc 863  Q
    |||||||||||||  || ||| ||||||||| |||| ||| |||||||||||||| | ||| | ||||||||||||||||| ||||| || |||||    
T  31012826 aattgattctactcaaaactaggatttgtagtttttaattttagaattgatttttcacacatatatttatagttcaactcatttttacataaatgc 31012731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 753 - 810
Target Start/End: Complemental strand, 11271640 - 11271582
Alignment:
Q  753 tgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattcta 810  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| ||||    
T  11271640 tgattttgcctccagaattgattctaacttgaagctaggatttgtagcttttgagtcta 11271582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 748 - 821
Target Start/End: Original strand, 18597017 - 18597091
Alignment:
Q  748 aaaaatgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||| ||||||| |||||| ||||||||||| ||||||||||| ||||| | |||||||||||| ||||||||||    
T  18597017 aaaattgattttacctccagaattgattctaacttgaagctataatttgaaccttttgattctataattgatttt 18597091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 753 - 854
Target Start/End: Original strand, 25319030 - 25319131
Alignment:
Q  753 tgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactt 851  Q
    |||||||| ||||| ||||||||||| ||||||| || ||||||||||||| || |||| |  |||||||||| ||  |||||||| |||||||||||||    
T  25319030 tgattttgtctccagaattgattctaacttgaaggtaggatttgtagcttt-gagtctaaatgtgattttttatactgaaatttattgttcaactcactt 25319128  T
Q  852 tta 854  Q
    |||    
T  25319129 tta 25319131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 773 - 822
Target Start/End: Original strand, 16643981 - 16644030
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  16643981 attctacttgaagctataatttatagattttgattctagaattgattttt 16644030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 753 - 862
Target Start/End: Complemental strand, 55927872 - 55927764
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||||||||| || ||||||||| |||||| ||||  | ||||||||| ||||||||||||||| |  | | || ||||||||| |||||| |||||||    
T  55927872 tgattttgccttcagaattgattccacttgaggctaaaaattgtagcttctgattctagaattga-tcgtcacactcaaatttattgttcaagtcacttt 55927774  T
Q  853 tatatgaatg 862  Q
    || |||||||    
T  55927773 tacatgaatg 55927764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 768 - 854
Target Start/End: Original strand, 33456372 - 33456455
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||| |||||| || || ||||||||||||||||||||||||| ||||||||||    ||| |||| |||||||||| |||||||||    
T  33456372 aatttattctatttaaaactatgatttgtagcttttgattctataattgatttt---cacataaatctatagttcaattcactttta 33456455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 819
Target Start/End: Complemental strand, 39733733 - 39733674
Alignment:
Q  759 tgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatt 819  Q
    ||||||||||||||||||||||||| | ||  ||||||||||||||||| |||||||||||    
T  39733733 tgcctccataattgattctacttga-gttacaatttgtagcttttgattgtagaattgatt 39733674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 768 - 819
Target Start/End: Original strand, 1616389 - 1616439
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgatt 819  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  1616389 aattgattctactt-aagctacaatttgtagcttttgattctagaattgatt 1616439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 748 - 822
Target Start/End: Original strand, 8330093 - 8330168
Alignment:
Q  748 aaaaatgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||| ||||| |||||||||||| ||||||| ||||||||||  | ||| |||||||||||||| |||||||||||    
T  8330093 aaaattgattctgcctccataatggattctaacttgaagctagaaattggagcttttgattctataattgattttt 8330168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 529 - 576
Target Start/End: Original strand, 29718977 - 29719024
Alignment:
Q  529 agacatataattatagaataatttaggtttttctaatttcttataaca 576  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  29718977 agacatataattttaggataatttaggtttttataatttcttataaca 29719024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 822
Target Start/End: Complemental strand, 2206446 - 2206376
Alignment:
Q  753 tgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||| |||||| ||||||||||| ||||||||||  | ||| ||||||||||||||| ||||||||||    
T  2206446 tgatttttcctccaaaattgattctagcttgaagctaaaaattggagcttttgattctaggattgattttt 2206376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 768 - 822
Target Start/End: Original strand, 30357645 - 30357699
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||| ||||||||||||| |||||||||||||| || |||| ||||||    
T  30357645 aattgattctaattgaagctatgatctgtagcttttgattatataatttattttt 30357699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 772 - 854
Target Start/End: Complemental strand, 52965937 - 52965856
Alignment:
Q  772 gattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||||| ||  |||| ||||||||||||||| |||||| || | | ||| ||||||||| |||||||||||||||    
T  52965937 gattctacttgaagttactatttatagcttttgattctaaaattga-ttctaacacataaatttataattcaactcactttta 52965856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 768 - 862
Target Start/End: Complemental strand, 53713648 - 53713555
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||| ||| |||||||||||| ||||||||||||||||||||| ||||||  ||  | | | | || |||||||||||||||||||| |||||||    
T  53713648 aattaattttacttgaagctacgatttgtagcttttgattctataattga-cttccacataaatatatatagttcaactcacttttacatgaatg 53713555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 797 - 854
Target Start/End: Original strand, 4243414 - 4243470
Alignment:
Q  797 agcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||||||||||||| |||||| || ||||||||| |||| |||||||||||    
T  4243414 agcttttgattctagaattga-tttttacactcaaatttattgttctactcactttta 4243470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 768 - 861
Target Start/End: Original strand, 39386631 - 39386723
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    |||||||||||||| ||||||  |||| || | ||| |||||| ||||||||||  | ||||| ||||| ||||||||||||||||| ||||||    
T  39386631 aattgattctacttaaagctaaaatttataacatttaattctataattgattttc-acacacatatttaaagttcaactcacttttacatgaat 39386723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 768 - 821
Target Start/End: Complemental strand, 55187049 - 55186996
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||||||||||||||||| || |||||||| ||||| ||| |||||||||||||    
T  55187049 aattgattctacttgaagttaggatttgtaacttttaattatagaattgatttt 55186996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 755 - 822
Target Start/End: Original strand, 2206502 - 2206570
Alignment:
Q  755 attttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||| ||||||||||||||||| ||||||||||    |||||||||||||||||| ||||| |||||    
T  2206502 attttggctccataattgattctaacttgaagctaaacattgtagcttttgattctataattgtttttt 2206570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 768 - 864
Target Start/End: Complemental strand, 2326898 - 2326803
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgca 864  Q
    ||||||||||| | ||| |||  ||||||| ||||| ||||||||||| ||| |  ||||||| ||||| |||||||||||| |||| |||||||||    
T  2326898 aattgattctattcgaaactagaatttgtaacttttaattctagaattaattctc-aaacacatatttaaagttcaactcacctttacatgaatgca 2326803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 821
Target Start/End: Original strand, 2635146 - 2635214
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||||||||||||| |||||||| | ||||||||||    ||| ||||||||| |||||||||||||||    
T  2635146 tgattttgcctccagaattgattatgcttgaagctagagattggagcttttgagtctagaattgatttt 2635214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 755 - 859
Target Start/End: Complemental strand, 33347270 - 33347167
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||| | |||| ||||||||||||| || ||||||||  |||| |||| | |||| | |||||  |||||||| |||||||||| |||||||||    
T  33347270 attttgcctctagaattaattctacttgaaggtaggatttgtaattttttattcgataatt-aatttttgcacacaaatatatagttcaattcactttta 33347172  T
Q  855 tatga 859  Q
     ||||    
T  33347171 catga 33347167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 782 - 846
Target Start/End: Complemental strand, 42971975 - 42971912
Alignment:
Q  782 gaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaact 846  Q
    |||||||| |||| ||||||||| || |||||||||| ||||| | |||||||||||||||||||    
T  42971975 gaagctataatttatagcttttgcttttagaattgat-ttttacatacaaatttatagttcaact 42971912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 808
Target Start/End: Complemental strand, 54705493 - 54705437
Alignment:
Q  753 tgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattc 808  Q
    |||||||||||| ||||||||| ||| |||||||||| | |||||||||||||||||    
T  54705493 tgattttgcctcaataattgatactaacttgaagctagggtttgtagcttttgattc 54705437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 755 - 801
Target Start/End: Complemental strand, 8283466 - 8283419
Alignment:
Q  755 attttgcctccataattgattcta-cttgaagctatgatttgtagctt 801  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||    
T  8283466 attttgcctccagcattgattctaacttgaagctatgatttgtagctt 8283419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 748 - 810
Target Start/End: Original strand, 22683841 - 22683904
Alignment:
Q  748 aaaaatgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattcta 810  Q
    |||| |||||||||||||| |||| ||| || |||||||||||||| |||||||||||| ||||    
T  22683841 aaaattgattttgcctccagaattaattataacttgaagctatgatctgtagcttttgagtcta 22683904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 848
Target Start/End: Original strand, 30889770 - 30889864
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactca 848  Q
    |||||||| ||| | ||||||||||||||| |  || ||||||||  |||||||| ||||||||| |||||| || | ||||||||||| ||||||    
T  30889770 tgattttgtctctagaattgattctacttgcaattaagatttgtaaattttgattgtagaattga-tttttatactccaatttatagtttaactca 30889864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 755 - 822
Target Start/End: Original strand, 51093243 - 51093310
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||||||| |||||||||||||  ||||||||  ||||| ||||||||  |||| |||||||||||    
T  51093243 attttgcctctataattgattctaactgaagctagaatttggagcttttgcctctacaattgattttt 51093310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 854
Target Start/End: Original strand, 20718615 - 20718700
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||| || |||||  ||||||||||||||||| ||| || |||||| |||||  ||||||| ||||||||||| | |||||||    
T  20718615 aattgattttatttgaatttatgatttgtagcttttaattataaaattga-tttttctacacaaaattatagttcaagttactttta 20718700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 787
Target Start/End: Original strand, 33843661 - 33843695
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagct 787  Q
    |||||||||||||| ||||||||||||||||||||    
T  33843661 tgattttgcctccaaaattgattctacttgaagct 33843695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 822
Target Start/End: Original strand, 43571476 - 43571530
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||||| ||||||||||||| |||| || ||||| |||||||| |||||||||    
T  43571476 aattgattatacttgaagctataatttttaacttttaattctagagttgattttt 43571530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 748 - 805
Target Start/End: Original strand, 43628095 - 43628153
Alignment:
Q  748 aaaaatgattttgcctccataattgattct-acttgaagctatgatttgtagcttttga 805  Q
    |||||||||||||| |||||| |||||||| | ||||||||| ||||||||| ||||||    
T  43628095 aaaaatgattttgcttccatagttgattctaagttgaagctaagatttgtagattttga 43628153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 748 - 821
Target Start/End: Complemental strand, 20712921 - 20712848
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||| |||||||||||||  ||  |||||||||||||||||  |||||||| |||| |||  ||||||||||||    
T  20712921 aaaattgattttgcctcccgaaacgattctacttgaagctaaaatttgtagttttttattgaagaattgatttt 20712848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 576
Target Start/End: Original strand, 25329596 - 25329641
Alignment:
Q  532 catataattatagaataatttagg-tttttctaatttcttataaca 576  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||    
T  25329596 catataattctaaaataatttaggttttttctaatttcttataaca 25329641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 850
Target Start/End: Complemental strand, 53913679 - 53913583
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcact 850  Q
    |||||||||||  |||||||||| ||||| ||| |||||||| |   || |||||||| |||||| |||| | ||| |||||||||||| ||||||||    
T  53913679 tgattttgcctttataattgattttacttaaagatatgatttatcatttgtgattctataattga-ttttcacacataaatttatagttaaactcact 53913583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 1e-28; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 753 - 854
Target Start/End: Original strand, 4910891 - 4910991
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||| |||||||||    
T  4910891 tgattctgcctcaaaaattgattctacttgaagctatgatttgtagcttttgattctagaattga-ttttcacatacaaatttatagttcgactcacttt 4910989  T
Q  853 ta 854  Q
    ||    
T  4910990 ta 4910991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 753 - 860
Target Start/End: Complemental strand, 5724732 - 5724626
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||| ||||||| ||||| |||||||| |||  || ||||||||||    
T  5724732 tgattttgcctccaaaattgattctacttgaagctaggatttgtaactttttattctataattgat-ttttacacacaaatatatcatttaactcacttt 5724634  T
Q  853 tatatgaa 860  Q
    ||||||||    
T  5724633 tatatgaa 5724626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 768 - 854
Target Start/End: Complemental strand, 765473 - 765390
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    ||||||||||||||||||| |||||    
T  765473 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattattaaag---aaatttatagttcaactcattttta 765390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 755 - 865
Target Start/End: Original strand, 852517 - 852626
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||||||||||||| |||||||||||  | |||||| || ||||||||||||||| |||||| || ||||| ||| ||| ||||||||||||    
T  852517 attttgcctccataattgattcaacttgaagctagaaattgtaggttctgattctagaattga-tttttacacccaaatgtattgtttaactcactttta 852615  T
Q  855 tatgaatgcat 865  Q
     ||||||||||    
T  852616 catgaatgcat 852626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 768 - 862
Target Start/End: Original strand, 3482044 - 3482137
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||| ||||||||| || |||||||||| ||||||| ||||||||| |||| | |||||| |||||||||||||| ||||||| |||||||    
T  3482044 aattgattatacttgaagttaagatttgtagcctttgattttagaattga-ttttcacacacaagtttatagttcaacttacttttacatgaatg 3482137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 793 - 867
Target Start/End: Original strand, 17225875 - 17225948
Alignment:
Q  793 ttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgcatca 867  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||| ||||||| ||||    
T  17225875 ttgtagcttttgattctagaattga-tttttacatacaaatttatagttcaactcagttttacatgaatgtatca 17225948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 755 - 816
Target Start/End: Complemental strand, 7952809 - 7952748
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattg 816  Q
    |||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||    
T  7952809 attttgcctccaaaatttattctacttgaagcgaggatttgtagcttttgattctagaattg 7952748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 753 - 854
Target Start/End: Original strand, 26280588 - 26280688
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||| | ||||||||| |||||||||||  |||||||| ||||||||| | |||||| ||||||   |||||||||||||| ||||||||||    
T  26280588 tgattttgcctcaagaattgattccacttgaagctagaatttgtagtttttgattccaaaattga-tttttacgtacaaatttatagttaaactcacttt 26280686  T
Q  853 ta 854  Q
    ||    
T  26280687 ta 26280688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 754 - 822
Target Start/End: Original strand, 30927027 - 30927095
Alignment:
Q  754 gattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||||| |||| |||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||    
T  30927027 gattttgcttccagaattgattatacttgaagctaagattcgtagcttttgattatagaattgattttt 30927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 755 - 854
Target Start/End: Complemental strand, 1485246 - 1485148
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||  | ||||||||||||||||| |||  | ||| ||||||||||||||||||||| |||| | || ||||||||| ||||||||||||||||    
T  1485246 attttgcctttagaattgattctacttgaatctagaaattggagcttttgattctagaattga-ttttaacactcaaatttattgttcaactcactttta 1485148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 753 - 844
Target Start/End: Complemental strand, 6654192 - 6654102
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaa 844  Q
    ||||||| ||| || |||| |||||||||||||||| |||||||||||||| |||||||| |||| |||| | ||| |||||||||||||||    
T  6654192 tgatttttccttcagaattaattctacttgaagctaggatttgtagcttttaattctagatttga-ttttcacacagaaatttatagttcaa 6654102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 768 - 851
Target Start/End: Original strand, 25195848 - 25195930
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactt 851  Q
    ||||||||||| || || ||| ||||| ||||||||||||||||||||||  || || ||||||||||||||||||||||||||    
T  25195848 aattgattctaattaaaactaggatttatagcttttgattctagaattga-attgtacacacaaatttatagttcaactcactt 25195930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 748 - 854
Target Start/End: Original strand, 16540085 - 16540190
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactc 847  Q
    |||| ||||| || ||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||  ||| |   ||| |||||||||| |||||    
T  16540085 aaaattgattctgtctccaaaattgattctacttgaagctaggatttgtagcttttgattattgaattga-gtttcacttacatatttatagttaaactc 16540183  T
Q  848 actttta 854  Q
    |||||||    
T  16540184 actttta 16540190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 753 - 854
Target Start/End: Complemental strand, 25195466 - 25195368
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||||  |||||||||||||||||||   ||||||||| |||| |||||| |||||| |||| | ||||||||||| | |||||||||||||    
T  25195466 tgattctgcctccggaattgattctacttgaagc--ggatttgtagtttttcattctataattga-ttttcatacacaaatttacaattcaactcacttt 25195370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 768 - 821
Target Start/End: Complemental strand, 6896037 - 6895984
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||| |||||    
T  6896037 aattgattctacctgaagttaggatttgtagcttttgattctagaatttatttt 6895984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 821
Target Start/End: Original strand, 2234498 - 2234566
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||||||||| || ||||||||| |||||||||||  |  || |||||||||||||||||||||||||    
T  2234498 tgattttgccttcaaaattgattcaacttgaagctaaaaactgaagcttttgattctagaattgatttt 2234566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 787 - 861
Target Start/End: Original strand, 34910964 - 34911035
Alignment:
Q  787 tatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    |||||||||||||||||||||||||||||||||||    ||||| | |||||||| |||| ||||||| ||||||    
T  34910964 tatgatttgtagcttttgattctagaattgatttt---gacacacaattatagtttaactaacttttacatgaat 34911035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 755 - 854
Target Start/End: Original strand, 34620871 - 34620969
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||  |||||||||||| ||||||||  | |  |||||| ||||||||||||||| |||||| ||  ||||||||  |||||||||||||||    
T  34620871 attttgcctccggaattgattctacatgaagctagaaatcatagcttctgattctagaattga-tttttacactaaaatttatttttcaactcactttta 34620969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 755 - 854
Target Start/End: Original strand, 34748308 - 34748406
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||  |||||||||||| ||||||||  | |  |||||| ||||||||||||||| |||||| ||  ||||||||  |||||||||||||||    
T  34748308 attttgcctccggaattgattctacatgaagctagaaatcatagcttctgattctagaattga-tttttacactaaaatttatttttcaactcactttta 34748406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 797 - 862
Target Start/End: Original strand, 947594 - 947656
Alignment:
Q  797 agcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    ||||||||||||||||||||| || ||||||||||  ||||| ||||||||||||||| |||||||    
T  947594 agcttttgattctagaattga-ttcttaaacacaa--ttataattcaactcacttttacatgaatg 947656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 768 - 862
Target Start/End: Original strand, 993956 - 994049
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||| ||| ||||||||| |||||||| || ||||||||  || ||||||||||| ||||| | | |||| |||||| |||||||||||||||||    
T  993956 aattaattttacttgaagttatgatttttaacttttgatcatataattgattttt-aaacatatagttattgttcaattcacttttatatgaatg 994049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 867
Target Start/End: Original strand, 8854903 - 8855016
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||||| |||| | ||||| |||||| ||||||||  |||||||| |||||| | ||||||||| |||||| | |||||||||| ||| |||| |||||    
T  8854903 tgattttacctcaagaattgtttctacatgaagctacaatttgtagtttttgactatagaattga-tttttacatacaaatttatggttgaacttacttt 8855001  T
Q  853 tatatgaatgcatca 867  Q
    || || |||| ||||    
T  8855002 tacattaatgtatca 8855016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 768 - 862
Target Start/End: Original strand, 8860502 - 8860595
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    ||||| |||| |||||||| |||||||||||||||| | |  |||||||| |||| | ||| |||||||| |||||||||||||||  |||||||    
T  8860502 aattgcttctgcttgaagcaatgatttgtagcttttaagttaagaattga-ttttgacacataaatttatggttcaactcacttttgcatgaatg 8860595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 765 - 854
Target Start/End: Complemental strand, 434327 - 434239
Alignment:
Q  765 cataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||| || |||||| ||  |||  |||||||||||| |||||||||| ||||| ||| ||||||| | |||||||||||||||    
T  434327 cataattgattatatttgaagttaaaattaatagcttttgattttagaattgat-ttttatacataaatttaaatttcaactcactttta 434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 768 - 820
Target Start/End: Complemental strand, 3436969 - 3436917
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattt 820  Q
    ||||||||||| ||||| |||| ||||||| |||||||||||| |||||||||    
T  3436969 aattgattctagttgaatctataatttgtaacttttgattctataattgattt 3436917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 797 - 861
Target Start/End: Original strand, 9505797 - 9505860
Alignment:
Q  797 agcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    ||||||||||||||  ||||| ||||||||| ||||||||| ||||||| |||||||| ||||||    
T  9505797 agcttttgattctatgattga-tttttaaactcaaatttattgttcaacacacttttacatgaat 9505860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 778 - 854
Target Start/End: Complemental strand, 31305924 - 31305849
Alignment:
Q  778 acttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||  | ||| ||||||||||||||||||||| ||| || || ||||||||| | ||||||||||||||    
T  31305924 acttgaagctaaaaattggagcttttgattctagaattga-tttatacactcaaatttattgatcaactcactttta 31305849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 797 - 861
Target Start/End: Complemental strand, 34027475 - 34027412
Alignment:
Q  797 agcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaat 861  Q
    |||||||||||||||||||||| ||||| || |||||||||  ||||||||||| ||| ||||||    
T  34027475 agcttttgattctagaattgat-ttttacactcaaatttattattcaactcactcttacatgaat 34027412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 815
Target Start/End: Original strand, 4907961 - 4908008
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaatt 815  Q
    |||||||| || ||||||||||||||||||| ||||||||||| ||||    
T  4907961 aattgattttatttgaagctatgatttgtagtttttgattctataatt 4908008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 862
Target Start/End: Original strand, 7280488 - 7280581
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||| ||||| || |||  | |||||||||||||||  | |||| | |||||| |||||||||||| |||||| |||||||||||| ||||    
T  7280488 aattgattttacttaaaactaaaacttgtagcttttgatttcaaaatt-actttttacacacaaatttatcgttcaattcacttttatataaatg 7280581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 768 - 821
Target Start/End: Original strand, 31725774 - 31725827
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||||||||||||||| ||| ||||| ||  ||||||||||| ||||||||||    
T  31725774 aattgattctacttgaacctaggatttttaatttttgattctaaaattgatttt 31725827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 3e-26; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 761 - 854
Target Start/End: Original strand, 42740968 - 42741060
Alignment:
Q  761 cctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| || ||||||||  || |||||||||||||    
T  42740968 cctccataattgattctacttgaagctaagatttgtagcttttgattctagaattga-tttttacactcaaatttactgtccaactcactttta 42741060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 753 - 866
Target Start/End: Complemental strand, 33019258 - 33019146
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||| | |||||||| || |||||||||  |||||||||||||| || |||||||||||||  | ||| |||||||||||||||||||||||    
T  33019258 tgattctgcctctagaattgattatatttgaagctagaatttgtagcttttggttttagaattgattttc-acacataaatttatagttcaactcacttt 33019160  T
Q  853 tatatgaatgcatc 866  Q
    || |||||||||||    
T  33019159 tacatgaatgcatc 33019146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 750 - 822
Target Start/End: Original strand, 30503189 - 30503261
Alignment:
Q  750 aaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  30503189 aaatgattttgcctccaaaattgattctacttgaagccaggattcgtagcttttgattcaagaattgattttt 30503261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 753 - 862
Target Start/End: Original strand, 42982525 - 42982635
Alignment:
Q  753 tgattttgcctccataatt--gattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcact 850  Q
    |||||||||||||| ||||  |||||||||||||||||  | |||||||||||||||| |||||||| |||||| ||||||||||||  | |||||||||    
T  42982525 tgattttgcctccagaattttgattctacttgaagctagaaattgtagcttttgattccagaattga-tttttacacacaaatttattttacaactcact 42982623  T
Q  851 tttatatgaatg 862  Q
    |||| |||||||    
T  42982624 tttacatgaatg 42982635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 768 - 862
Target Start/End: Original strand, 43501123 - 43501214
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||||||||| |   |||||||| ||||| ||||||||| ||||| |||||||    
T  43501123 aattgattctacttgaaactaggatttgtagcttttgattttagaattgattct---aacacaaaattataattcaactcagttttacatgaatg 43501214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 753 - 862
Target Start/End: Original strand, 10644586 - 10644694
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||||| |||| ||||||||||||| || ||||||||| |||| ||| ||||||| |  ||| | ||| |||||||||||||||||||||||    
T  10644586 tgattctgcctccaaaatttattctacttgaagttaagatttgtagtttttcattatagaatt-aactttcatacataaatttatagttcaactcacttt 10644684  T
Q  853 tatatgaatg 862  Q
    ||||| ||||    
T  10644685 tatataaatg 10644694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 761 - 862
Target Start/End: Complemental strand, 11504155 - 11504056
Alignment:
Q  761 cctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaa 860  Q
    |||||| ||||||||||||   ||| || ||||||||| |||||||| ||||||||  |||| | ||||||| ||||||||||||||||||||| |||||    
T  11504155 cctccaaaattgattctaccgaaagttaggatttgtagtttttgattatagaattg--ttttcacacacaaagttatagttcaactcacttttacatgaa 11504058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 756 - 862
Target Start/End: Original strand, 16518765 - 16518869
Alignment:
Q  756 ttttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttat 855  Q
    |||||| |||| ||||||||||||| |||| || |||||||||||||||||| || |  |||  |||||  ||||||||||||||||||||||||||||     
T  16518765 ttttgcttccagaattgattctactagaagataggatttgtagcttttgattata-agatga-cttttacgcacaaatttatagttcaactcacttttac 16518862  T
Q  856 atgaatg 862  Q
    |||||||    
T  16518863 atgaatg 16518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 748 - 822
Target Start/End: Original strand, 21659697 - 21659771
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||| |||||||||||||||||||| ||||||| | |||||  | ||||||||| ||||||||||||||||||||    
T  21659697 aaaattgattttgcctccataattgtttctactcgtagctaaaaattgtagcttatgattctagaattgattttt 21659771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 753 - 822
Target Start/End: Complemental strand, 2002797 - 2002728
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||||||||||| |  |||||||||||||||||| ||||||||| |||| |||||| |||||||||||    
T  2002797 tgattttgcctccagacctgattctacttgaagctaggatttgtagtttttcattctaaaattgattttt 2002728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 755 - 852
Target Start/End: Original strand, 31453368 - 31453464
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||| |||||||||||||||||||||||  ||||||  |||||||||||  |||||| |||| |  |||||||||| |||| ||||||||||    
T  31453368 attttgcctctataattgattctacttgaagctaaaatttgttccttttgattctgaaattga-ttttcacgcacaaatttagagtttaactcacttt 31453464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 756 - 862
Target Start/End: Original strand, 5977166 - 5977273
Alignment:
Q  756 ttttgcctccataattgattcta-cttgaagctatgatttgtagctttt-gattctagaattgattttttaaacacaaatttatagttcaactcactttt 853  Q
    ||||||||||||||||||||||| ||||||||||  ||||| ||||||| |  |||| | ||||||||| || | ||||||||| ||||| |||||||||    
T  5977166 ttttgcctccataattgattctaacttgaagctaaaatttggagctttttgcctctatatttgattttt-aacctcaaatttattgttcacctcactttt 5977264  T
Q  854 atatgaatg 862  Q
    |||||||||    
T  5977265 atatgaatg 5977273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 753 - 862
Target Start/End: Original strand, 11510936 - 11511044
Alignment:
Q  753 tgattttgcctccataattgattcta-cttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactt 851  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||| || |||||  |||| |||| |||||  || | ||||||||| ||||||| |||||    
T  11510936 tgattttgcctccatatttgattctatcttgaagctagaatttggagtttttgcctctacaatttatttt--aacctcaaatttattgttcaacccactt 11511033  T
Q  852 ttatatgaatg 862  Q
    |||||||||||    
T  11511034 ttatatgaatg 11511044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 791 - 854
Target Start/End: Original strand, 33502258 - 33502320
Alignment:
Q  791 atttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||| |||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  33502258 atttgtaacttttgattctaaaattgattttt-acacacatatttatagttcaactcactttta 33502320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 768 - 854
Target Start/End: Original strand, 44439251 - 44439337
Alignment:
Q  768 aattgattcta-cttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||| ||||||||||  ||||| |||||||||||||| |||||| |||| | || ||||||||| ||||||||||||||||    
T  44439251 aattgattctaacttgaagctaaaatttggagcttttgattctaaaattga-ttttaacactcaaatttattgttcaactcactttta 44439337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 753 - 862
Target Start/End: Complemental strand, 1976967 - 1976858
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaa-acacaaatttatagttcaactcactt 851  Q
    |||||||| ||||| |||||||||||||  || ||| || ||||| ||| | ||||||||||||||||||| | || ||||||||| ||| |||||||||    
T  1976967 tgattttgtctccaaaattgattctactataaacta-gaattgtaacttctaattctagaattgatttttttacactcaaatttattgttgaactcactt 1976869  T
Q  852 ttatatgaatg 862  Q
    ||| |||||||    
T  1976868 ttacatgaatg 1976858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 762 - 860
Target Start/End: Complemental strand, 8800790 - 8800694
Alignment:
Q  762 ctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaa 860  Q
    |||||||||||||| || |||| | ||||||||||| ||||||| |||| ||||||||||  | | ||||||||||| ||||||||||||||| |||||    
T  8800790 ctccataattgattatatttga-gatatgatttgtaacttttgaatctataattgatttta-atatacaaatttataattcaactcacttttacatgaa 8800694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 527 - 576
Target Start/End: Original strand, 15216804 - 15216853
Alignment:
Q  527 taagacatataattatagaataatttaggtttttctaatttcttataaca 576  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  15216804 taagacatataattctagaataatttagatttttataatttcttataaca 15216853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 750 - 854
Target Start/End: Original strand, 3352056 - 3352159
Alignment:
Q  750 aaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcac 849  Q
    ||||||| ||| || ||||||||||| ||||||||| |  || ||| |||||||||||||| |||||| |||| | ||||||||||||  ||||||| ||    
T  3352056 aaatgatcttgtcttcataattgattttacttgaagttgggaattgcagcttttgattctataattga-ttttcacacacaaatttatgtttcaacttac 3352154  T
Q  850 tttta 854  Q
    |||||    
T  3352155 tttta 3352159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 773 - 860
Target Start/End: Complemental strand, 5533113 - 5533027
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacac--aaatttatagttcaactcacttttatatgaa 860  Q
    ||||||||||||||||  |||||||||||||||||||  ||||||   |||||||||  ||||||||| |||||||||| |||| |||||    
T  5533113 attctacttgaagctactatttgtagcttttgattcttaaattga---tttaaacacataaatttataattcaactcacatttacatgaa 5533027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 768 - 847
Target Start/End: Original strand, 12037059 - 12037137
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactc 847  Q
    ||||||||||| ||||| |||  |||||||||||||||||||| |||||| |||| | | |||||||||| |||||||||    
T  12037059 aattgattctagttgaaactaaaatttgtagcttttgattctacaattga-ttttcataaacaaatttatggttcaactc 12037137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 854
Target Start/End: Original strand, 22535981 - 22536081
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||  | |||||||||||||||||  ||  ||||| ||||||||||| ||||||| | |||||  ||||| |||||||||| |||||| |||    
T  22535981 tgattttgcctttagaattgattctacttgaatttagaatttgaagcttttgattttagaatt-aatttttgcacacatatttatagttaaactcatttt 22536079  T
Q  853 ta 854  Q
    ||    
T  22536080 ta 22536081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 788
Target Start/End: Complemental strand, 680379 - 680344
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagcta 788  Q
    |||||||||||||| |||||||||||||||||||||    
T  680379 tgattttgcctccagaattgattctacttgaagcta 680344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 748 - 822
Target Start/End: Complemental strand, 3476537 - 3476462
Alignment:
Q  748 aaaaatgattttgcctccataattgattct-acttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||| |||||||||||||| |||||||||| |||| ||||||  | ||  ||||||||||||||||||| ||||||    
T  3476537 aaaattgattttgcctccagaattgattctaacttaaagctaaaaattagagcttttgattctagaatttattttt 3476462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 860
Target Start/End: Original strand, 4779111 - 4779197
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaa 860  Q
    |||||||||||| |||| ||||||||||||| ||| ||||||| | ||| ||||| ||||||||| | |||| |||| |||| |||||    
T  4779111 attctacttgaaactataatttgtagctttttattttagaattta-tttataaactcaaatttattgctcaattcacatttacatgaa 4779197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 859
Target Start/End: Original strand, 13912785 - 13912875
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatga 859  Q
    |||| ||||||| ||||||||  |||||||  |||| ||||||||||| | |||||| |||||||||||  |||||||||| ||||| ||||    
T  13912785 aatttattctacatgaagctagaatttgtaattttttattctagaatt-aatttttacacacaaatttaccgttcaactcatttttacatga 13912875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 791 - 854
Target Start/End: Original strand, 32596012 - 32596074
Alignment:
Q  791 atttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||| |||||||||||| |||||| |||||| | ||||||| ||| |||||||||||||||    
T  32596012 atttgtaacttttgattctaaaattga-tttttacatacaaattcataattcaactcactttta 32596074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 862
Target Start/End: Complemental strand, 4894244 - 4894151
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    ||||||||| ||||||| |||  | | |||||||||||||||| |||||| || ||| || |||||||||  ||||| ||||||||| |||||||    
T  4894244 aattgattcaacttgaaactagaaatcgtagcttttgattctataattga-ttattatactcaaatttattattcaagtcacttttaaatgaatg 4894151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 822
Target Start/End: Original strand, 7630216 - 7630245
Alignment:
Q  793 ttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||||||||||||||||||||||    
T  7630216 ttgtagcttttgattctagaattgattttt 7630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 805
Target Start/End: Original strand, 37561689 - 37561742
Alignment:
Q  753 tgattttgcctccataattgattct-acttgaagctatgatttgtagcttttga 805  Q
    |||||||||||| |||||||||||| ||||||| ||| |||||||| |||||||    
T  37561689 tgattttgcctctataattgattctaacttgaaactacgatttgtaccttttga 37561742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 3e-26; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 771 - 862
Target Start/End: Original strand, 30557505 - 30557593
Alignment:
Q  771 tgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  30557505 tgattctagttgaagctaggatttgtagtttttgattctagaattgatttt---cacacaaatttatagttcaactcacttttatatgaatg 30557593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 772 - 854
Target Start/End: Original strand, 11049252 - 11049333
Alignment:
Q  772 gattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||    
T  11049252 gattctacttgaagctaggatttgtagcttttgattctaaaattga-tttttacacacaaatttatagttcaagtcactttta 11049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 748 - 862
Target Start/End: Original strand, 1514321 - 1514434
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactc 847  Q
    |||| ||||| || ||||| |||| |||||||||||||||| |||||||||||||| ||| || |||||| |||||| |||||||||||| |||||||||    
T  1514321 aaaactgattctgtctccaaaatttattctacttgaagctaggatttgtagctttttattatataattga-tttttacacacaaatttattgttcaactc 1514419  T
Q  848 acttttatatgaatg 862  Q
    | ||||| |||||||    
T  1514420 atttttacatgaatg 1514434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 768 - 854
Target Start/End: Complemental strand, 7790729 - 7790644
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||||||||||| |||||||||||| ||| ||||||| ||||||| ||||| |||||||||||| ||||||||||||||||    
T  7790729 aattgattctacttgaagttatgatttgtagatttagattctataattgat-ttttacacacaaatttattgttcaactcactttta 7790644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 777 - 854
Target Start/End: Original strand, 7524120 - 7524196
Alignment:
Q  777 tacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||| || |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||    
T  7524120 tacttgaagttaggatttgtagcttttgattatagaattga-tttttacacacaaatttatagttcaactcactttta 7524196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 753 - 861
Target Start/End: Complemental strand, 28083990 - 28083883
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||| || | ||||||||||||||||||||||  |||||||||||||||||||| |||| | |||||| ||||||||||  |||||| ||||||||    
T  28083990 tgattttgtcttcgtaattgattctacttgaagctagaatttgtagcttttgattctataatt-aatttttacacacaaatttcaagttcagctcacttt 28083892  T
Q  853 tatatgaat 861  Q
    || ||||||    
T  28083891 tacatgaat 28083883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 757 - 867
Target Start/End: Complemental strand, 48549110 - 48549003
Alignment:
Q  757 tttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttata 856  Q
    |||||||||| |||||||||||||||||||||  | ||||||||| |||||||||||||||| |||||||| |  |||||| |||||||||||||||| |    
T  48549110 tttgcctccaaaattgattctacttgaagctagaaattgtagcttctgattctagaattgat-ttttaaactc--atttattgttcaactcacttttaca 48549014  T
Q  857 tgaatgcatca 867  Q
    | |||| ||||    
T  48549013 taaatgtatca 48549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 753 - 854
Target Start/End: Original strand, 6021787 - 6021887
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||| | ||| ||||||||||||||||| ||| ||||||||||||||||| ||| || |||||| || ||| ||||| ||||||||||||||    
T  6021787 tgattttgcctctagaatcgattctacttgaagctaggatatgtagcttttgattctataataga-tttttacactcaagtttatggttcaactcacttt 6021885  T
Q  853 ta 854  Q
    ||    
T  6021886 ta 6021887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 766 - 862
Target Start/End: Original strand, 3016158 - 3016253
Alignment:
Q  766 ataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||||||||  ||  ||||||||||||||||||||||||||| | |||| ||| |||||||  |||||||||||||||| |||||||    
T  3016158 ataattgattctacttgaacttagaatttgtagcttttgattctagaattga-tgtttacacataaatttacggttcaactcacttttacatgaatg 3016253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 771 - 862
Target Start/End: Complemental strand, 30850483 - 30850393
Alignment:
Q  771 tgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||| ||| ||||||||| |||| ||| |||||||||||||  | | ||||||||||||||||||||||||||| |||||||    
T  30850483 tgattctacttgaaactaggatttgtagtttttaattttagaattgatttta-acatacaaatttatagttcaactcacttttacatgaatg 30850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 759 - 854
Target Start/End: Complemental strand, 38797725 - 38797631
Alignment:
Q  759 tgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||| ||||||||| ||||||||| ||||||||||| ||| | | || |||||||| |||| | |||||||||||||||||||||||||||||    
T  38797725 tgcctccttaattgattatacttgaagttatgatttgtaacttctaaatcaagaattga-ttttcacacacaaatttatagttcaactcactttta 38797631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 793 - 866
Target Start/End: Complemental strand, 213599 - 213527
Alignment:
Q  793 ttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgcatc 866  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| | |||||||||||||||| |||||||||||    
T  213599 ttgtggcttttgattctagaattgattttt-aaactcaaatttgttgttcaactcacttttacatgaatgcatc 213527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 753 - 861
Target Start/End: Complemental strand, 47322008 - 47321902
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| ||| || |||||||||| ||||||||||||  ||||| || |||| |||||||||||||||||  | ||||||||||||||||||| |||||||    
T  47322008 tgattctgcttctataattgattatacttgaagctagaatttgcag-ttttaattctagaattgattttc-atacacaaatttatagttcaattcacttt 47321911  T
Q  853 tatatgaat 861  Q
    || ||||||    
T  47321910 tacatgaat 47321902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 768 - 858
Target Start/End: Original strand, 3416078 - 3416167
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatg 858  Q
    |||||||| ||||| ||| || ||||||||| |||| ||| |||||||||||||| | |||||||||||||||| |||||| |||||||||    
T  3416078 aattgattatacttaaagttaagatttgtagttttttattttagaattgattttt-acacacaaatttatagtttaactcaattttatatg 3416167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 768 - 854
Target Start/End: Complemental strand, 28287423 - 28287338
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||| ||||||||||||| | |||||||||||||||||| ||||||||| |||| | || ||||||||| |||||||| |||||||    
T  28287423 aattggttctacttgaagcaaggatttgtagcttttgattttagaattga-ttttaacactcaaatttattgttcaactaactttta 28287338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 773 - 862
Target Start/End: Original strand, 34915069 - 34915157
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||| ||||||||||  |||||||||||||||||||||||||| || | | |||| | |||||| ||||||||||||||| |||||||    
T  34915069 attctagttgaagctattctttgtagcttttgattctagaattga-ttctaacacaccattttataattcaactcacttttacatgaatg 34915157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 753 - 822
Target Start/End: Complemental strand, 31362303 - 31362238
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||||||||||||||||||||||    |||| ||  ||||||||||||||||||||||||||||||||    
T  31362303 tgattttgcctccataattgattct----gaagttagaatttgtagcttttgattctagaattgattttt 31362238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 774 - 822
Target Start/End: Complemental strand, 51500915 - 51500867
Alignment:
Q  774 ttctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  51500915 ttctacttgaacctaggatttgtagcttttgattctagaattgattttt 51500867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 755 - 854
Target Start/End: Complemental strand, 10325038 - 10324940
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||||||| | |||||| ||||||||||| ||  | |||||||||||||||||| ||||||| ||||| || ||||||||| |||  |||||||||||    
T  10325038 attttgcctctagaattgagtctacttgaagatagaaattgtagcttttgattctataattgat-ttttacactcaaatttattgttatactcactttta 10324940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 768 - 866
Target Start/End: Original strand, 47553935 - 47554033
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttg-attctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgcatc 866  Q
    ||||||||||| ||||||||||| ||||||| ||||  ||||||||||| | |||||| | | | ||||||||||||||||| ||||||| |||||||||    
T  47553935 aattgattctatttgaagctatgctttgtagtttttttattctagaatt-agtttttacatatacatttatagttcaactcatttttataagaatgcatc 47554033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 793 - 862
Target Start/End: Complemental strand, 26373603 - 26373538
Alignment:
Q  793 ttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||||||||||||||||||    ||||||||||| | |||| |||||||||| |||||||    
T  26373603 ttgtagcttttgattctagaattgatttt----acacaaatttaaaattcatctcacttttacatgaatg 26373538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 768 - 854
Target Start/End: Complemental strand, 11817403 - 11817319
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    |||||| ||||||| |||| | |||||| |||  |||||| || |||||||||||||  |||||||||||||||||||| |||||||    
T  11817403 aattgaatctacttaaagcaaagatttgcagccattgattttaaaattgatttttta--cacaaatttatagttcaactaactttta 11817319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 772 - 822
Target Start/End: Original strand, 3515820 - 3515870
Alignment:
Q  772 gattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||||||||||||||  | ||||||||||| ||||||||||||||||||    
T  3515820 gattctacttgaagctagaaattgtagcttttcattctagaattgattttt 3515870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 776 - 822
Target Start/End: Original strand, 27849145 - 27849191
Alignment:
Q  776 ctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  27849145 ctacttgaagctacgatgtgtagcttttgatactagaattgattttt 27849191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 768 - 846
Target Start/End: Original strand, 30996040 - 30996117
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaact 846  Q
    |||||||||||||||||| ||||||| |||| |||| ||| ||||||| | ||||||  |||| |||||||||||||||    
T  30996040 aattgattctacttgaagttatgattagtagttttttattatagaatt-agtttttacccacacatttatagttcaact 30996117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 762 - 862
Target Start/End: Complemental strand, 2099781 - 2099681
Alignment:
Q  762 ctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactca-cttttatatgaa 860  Q
    ||||| |||||||| || ||||||||  ||||||||| ||||| || ||||||||| |||| | ||| |||||||||| ||||||||  |||||||||||    
T  2099781 ctccagaattgattgtaattgaagctgagatttgtagattttggttatagaattga-ttttcacacataaatttatagctcaactcattttttatatgaa 2099683  T
Q  861 tg 862  Q
    ||    
T  2099682 tg 2099681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 768 - 857
Target Start/End: Original strand, 8381964 - 8382052
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatat 857  Q
    |||||||||||||||||||||  | ||||||| | |  |||||||||||| |||||| |  ||| ||||| |||||||||||||||||||    
T  8381964 aattgattctacttgaagctagaaattgtagcctctagttctagaattga-tttttacattcaagtttattgttcaactcacttttatat 8382052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 821
Target Start/End: Complemental strand, 30220312 - 30220243
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagct-tttgattctagaattgatttt 821  Q
    ||||||||| |  |||||||||||||||||||||||| |||||||| | |||| ||||| ||||||||||    
T  30220312 tgattttgcttgtataattgattctacttgaagctataatttgtagttctttgcttctacaattgatttt 30220243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 750 - 839
Target Start/End: Complemental strand, 34387798 - 34387710
Alignment:
Q  750 aaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatag 839  Q
    ||||||| ||| || ||||||||||| ||||||||| |  || ||| |||||||||||||| |||||| |||| | ||||||||||||||    
T  34387798 aaatgatcttgtcttcataattgattttacttgaagttgggaattgcagcttttgattctataattga-ttttcacacacaaatttatag 34387710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 862
Target Start/End: Complemental strand, 32370112 - 32370025
Alignment:
Q  774 ttctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||| ||  |||||||  |||| ||||||||||| |||||||| ||||||||||||| || ||||  |||||| |||||||    
T  32370112 ttctacttgaagttagaatttgtaattttttattctagaatt-attttttacacacaaatttataattgaacttgcttttacatgaatg 32370025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 768 - 844
Target Start/End: Original strand, 50571282 - 50571357
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaa 844  Q
    |||||||||||||||||| || ||||||||| |||| ||||||||| ||| | || | ||||||| |||||||||||    
T  50571282 aattgattctacttgaagttaggatttgtagttttttattctagaactga-tgttcagacacaaagttatagttcaa 50571357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 846
Target Start/End: Complemental strand, 40663061 - 40662991
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaact 846  Q
    ||||||||| ||||||  |||||||||||||||||| ||||||||||    | ||||||||||||| |||||||    
T  40663061 attctacttaaagctagtatttgtagcttttgattcaagaattgatta---acacacaaatttataattcaact 40662991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 771 - 821
Target Start/End: Complemental strand, 47892472 - 47892422
Alignment:
Q  771 tgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||||||||| ||||||  | ||| |||||||||||||||||||||||||    
T  47892472 tgattctacttaaagctagaaattgaagcttttgattctagaattgatttt 47892422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 755 - 840
Target Start/End: Complemental strand, 15986321 - 15986237
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagt 840  Q
    |||||||||||| |||||||| || ||||| ||| |||||  || |||| ||||||||||||| | || | |||||||||||||||    
T  15986321 attttgcctccagaattgattatagttgaaactaggatttcaagttttttattctagaattga-tattcacacacaaatttatagt 15986237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 770 - 822
Target Start/End: Original strand, 33693020 - 33693073
Alignment:
Q  770 ttgattcta-cttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||| ||||||||||  | |||||||||||||||||| |||||||||||    
T  33693020 ttgattctaacttgaagctagaaattgtagcttttgattctataattgattttt 33693073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 773 - 821
Target Start/End: Complemental strand, 36780199 - 36780150
Alignment:
Q  773 attctacttgaagctatgattt-gtagcttttgattctagaattgatttt 821  Q
    ||||||||||||| || ||||| ||||||||||||| |||||||||||||    
T  36780199 attctacttgaagttaggattttgtagcttttgattatagaattgatttt 36780150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 768 - 861
Target Start/End: Complemental strand, 220691 - 220597
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt-taaacacaaatttatagttcaactcacttttatatgaat 861  Q
    ||||||||||||||||||||||| |||| || |||||||||||||||||||||||  | ||| ||||||||||||||| ||||||||||||||||    
T  220691 aattgattctacttgaagctatgttttgcagtttttgattctagaattgatttttagatacaaaaatttatagttcaattcacttttatatgaat 220597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 6e-24; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 753 - 862
Target Start/End: Original strand, 40491561 - 40491669
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||||||||| || |||||| ||||||||||| || | ||||||||||||||||||||||||||  ||||| ||||||||||| |||| ||||||||||    
T  40491561 tgattttgccttcagaattgactctacttgaagttaagttttgtagcttttgattctagaattga-cttttacacacaaatttaaagtttaactcacttt 40491659  T
Q  853 tatatgaatg 862  Q
    || |||||||    
T  40491660 tacatgaatg 40491669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 768 - 853
Target Start/End: Complemental strand, 41386902 - 41386818
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttt 853  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||| | |||| ||||||||||||| ||||||||||||||    
T  41386902 aattgattctacttgaagctaggatttgtagcttttaattctagaattga-tatttacacacaaatttataattcaactcactttt 41386818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 768 - 862
Target Start/End: Complemental strand, 38123753 - 38123660
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||||||||||  | ||||||||| | |||||||||||||| ||||| || ||||||||| | |||||||||||||| |||||||    
T  38123753 aattgattctacttgaagctagaaattgtagcttctaattctagaattgat-ttttacactcaaatttattggtcaactcacttttacatgaatg 38123660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 768 - 809
Target Start/End: Original strand, 17111855 - 17111896
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattct 809  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17111855 aattgattctacttgaagctatgatttgtagcttttgattct 17111896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 761 - 822
Target Start/End: Complemental strand, 30182390 - 30182329
Alignment:
Q  761 cctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    |||||| |||||||||||||||||||||  | ||||||||||||||||||||||| ||||||    
T  30182390 cctccaaaattgattctacttgaagctaaaaattgtagcttttgattctagaattaattttt 30182329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 748 - 861
Target Start/End: Complemental strand, 15903637 - 15903527
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactc 847  Q
    |||| |||||||||||||| |||||||| ||||||||| |  ||||||||||||||||  ||  ||||||||||    |||||| ||| |||||||| ||    
T  15903637 aaaattgattttgcctccaaaattgattatacttgaagttgggatttgtagcttttgaagcttcaattgatttt---cacacaagtttctagttcaaatc 15903541  T
Q  848 acttttatatgaat 861  Q
    |||||| |||||||    
T  15903540 acttttctatgaat 15903527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 768 - 862
Target Start/End: Original strand, 45557363 - 45557456
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||| | || |||||||  || |||||||||| ||||||| |||||||||| | |||||||||| ||| |||||||||||||| |||||||    
T  45557363 aattgattttgctagaagctagaatctgtagcttttaattctaggattgattttt-acacacaaatttgtagctcaactcacttttacatgaatg 45557456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 789 - 847
Target Start/End: Original strand, 45997706 - 45997764
Alignment:
Q  789 tgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactc 847  Q
    |||||| ||||||||||||||| |||| ||||||  |||||||||||||||||||||||    
T  45997706 tgatttatagcttttgattctataatttatttttacaacacaaatttatagttcaactc 45997764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 768 - 821
Target Start/End: Original strand, 22195862 - 22195915
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||    
T  22195862 aattgattttactttaagctatgatttgtaacttttgattctaaaattgatttt 22195915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 821
Target Start/End: Original strand, 27571845 - 27571913
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||||| |||| | |||||||||||||||||| ||  | ||| |||||||||||||||||||||||||    
T  27571845 tgattttacctcaagaattgattctacttgaagttagaaattggagcttttgattctagaattgatttt 27571913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 760 - 819
Target Start/End: Complemental strand, 28725147 - 28725088
Alignment:
Q  760 gcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatt 819  Q
    |||||||  ||||||| ||||||||||||  |||||||||||||||||||| ||||||||    
T  28725147 gcctccaatattgattatacttgaagctagaatttgtagcttttgattctataattgatt 28725088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 755 - 821
Target Start/End: Complemental strand, 5489946 - 5489880
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||||||||||| |||||||||||||||| ||||  | ||| ||||||||||| || ||||||||||    
T  5489946 attttgcctccaaaattgattctacttgatgctagaaattggagcttttgattatataattgatttt 5489880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 766 - 860
Target Start/End: Original strand, 24109455 - 24109548
Alignment:
Q  766 ataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaa 860  Q
    |||||||||||| |||||||||||||||||||| ||||| ||  | || ||| |||| | |||||||| |||||| || |||||||||| |||||    
T  24109455 ataattgattctgcttgaagctatgatttgtagattttggttacaaaaatga-ttttcacacacaaatctatagtccagctcacttttacatgaa 24109548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 821
Target Start/End: Complemental strand, 44856909 - 44856843
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    ||||||| |||||| ||||||| |||||||||  |||||||| || | |||||||||||||||||||||    
T  44856909 tgattttccctccaaaattgatactacttgaa--tatgatttataacatttgattctagaattgatttt 44856843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 755 - 850
Target Start/End: Original strand, 1410947 - 1411041
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcact 850  Q
    |||||||||  | ||||||||||| |||||| ||| |||||||| ||||| || ||||||||| |||| | || |||||||| | |||||||||||    
T  1410947 attttgcctttagaattgattctatttgaagttataatttgtagattttgtttttagaattga-ttttcacacgcaaatttacaattcaactcact 1411041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 795 - 862
Target Start/End: Original strand, 25156225 - 25156291
Alignment:
Q  795 gtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||| |||| |||||||||||||||||| | ||| ||||| |||  ||||||||||||||||||||||    
T  25156225 gtagttttttattctagaattgattttt-acacataaattaataaatcaactcacttttatatgaatg 25156291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 802
Target Start/End: Complemental strand, 26984567 - 26984533
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttt 802  Q
    ||||||||||||||||||||| |||||||||||||    
T  26984567 aattgattctacttgaagctaagatttgtagcttt 26984533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 818
Target Start/End: Original strand, 45005003 - 45005068
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgat 818  Q
    ||||||||||| || |||||||||||||||||||||  | ||| ||  ||||||| ||||||||||    
T  45005003 tgattttgccttcagaattgattctacttgaagctaaaaattggaggctttgattatagaattgat 45005068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 4e-22; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 768 - 854
Target Start/End: Original strand, 52364049 - 52364134
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||| ||||||| |||||||||||||||||    
T  52364049 aattgtttctacttgaagctatgatttatagcttttgattctataattga-ttttcaaacataaatttacagttcaactcactttta 52364134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 754 - 860
Target Start/End: Complemental strand, 32523442 - 32523336
Alignment:
Q  754 gattttgcctccataattgattctacttg-aagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||||||||||||||||  ||||||||| ||| || ||||||||||||||||||||| ||||||| ||||| ||||||||||| |||| |||||||||     
T  32523442 gattttgcctccataattatttctacttggaagttaggatttgtagcttttgattctaaaattgat-ttttacacacaaatttagagtttaactcactta 32523344  T
Q  853 tatatgaa 860  Q
    || |||||    
T  32523343 tacatgaa 32523336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 777 - 862
Target Start/End: Complemental strand, 31708317 - 31708233
Alignment:
Q  777 tacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||| |||||||  ||||||||||||||||||||||||||| || | | ||||||||||||| ||||||||||||||| |||||||    
T  31708317 tactcgaagctactatttgtagcttttgattctagaattga-ttctaacacacaaatttataattcaactcacttttacatgaatg 31708233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 768 - 854
Target Start/End: Original strand, 4526130 - 4526215
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||||||| ||| | |||| ||||||| ||||||||| || ||||||||||| | |||||||||||||||||||| ||||||||    
T  4526130 aattgattctatttgtacctataatttgtaacttttgattttaaaattgattttt-acacacaaatttatagttcaacacactttta 4526215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 753 - 862
Target Start/End: Complemental strand, 25359676 - 25359568
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    ||||| |||||||| |||||||||||||||||| ||  |||||||| |||| |||||| |||||| |||| | ||||| |||||| ||| || ||||||     
T  25359676 tgattctgcctccagaattgattctacttgaagttagaatttgtagttttttattctataattga-ttttcacacacatatttattgttaaaatcacttc 25359578  T
Q  853 tatatgaatg 862  Q
    ||||||||||    
T  25359577 tatatgaatg 25359568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 753 - 857
Target Start/End: Original strand, 35058344 - 35058448
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaat-ttatagttcaactcactt 851  Q
    |||||||||||| | ||||||||||||||| |||||  | ||  ||||||||||||||||||||| |||| | || ||||| |||| |||||||||||||    
T  35058344 tgattttgcctcaagaattgattctacttggagctagaaattcgagcttttgattctagaattga-ttttaacactcaaatattattgttcaactcactt 35058442  T
Q  852 ttatat 857  Q
    ||||||    
T  35058443 ttatat 35058448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 766 - 821
Target Start/End: Original strand, 35058063 - 35058118
Alignment:
Q  766 ataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||||||||||||| |||||||| |||||||||||||| ||| |||||||||||||    
T  35058063 ataattgattctacatgaagctaggatttgtagcttttaattatagaattgatttt 35058118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 783 - 862
Target Start/End: Complemental strand, 52141320 - 52141242
Alignment:
Q  783 aagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||| |||||||||| || |||||||||||| |||||  | ||||| | |||||||||||||||||||||||||||||    
T  52141320 aagctaggatttgtagcattcgattctagaattaattttc-acacacataattatagttcaactcacttttatatgaatg 52141242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 748 - 862
Target Start/End: Complemental strand, 37335141 - 37335028
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactc 847  Q
    |||| |||||||||||| | |||||||| |||| |||| ||  | | |||||||||||||||||||||||||||| | ||   |||| || |||||||||    
T  37335141 aaaattgattttgcctcgagaattgattttactagaagttagaaatcgtagcttttgattctagaattgattttt-acacttgaattcattgttcaactc 37335043  T
Q  848 acttttatatgaatg 862  Q
    | |||||||||||||    
T  37335042 atttttatatgaatg 37335028  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 748 - 857
Target Start/End: Complemental strand, 40736644 - 40736537
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactc 847  Q
    |||| ||||||||| |||  ||||||||||||||||| |||| |||||| |||||||||||||||  | | |||| | ||||||||||||| ||||| |     
T  40736644 aaaattgattttgcatccgaaattgattctacttgaaactataatttgtcgcttttgattctaga--ttaattttcacacacaaatttataattcaatta 40736547  T
Q  848 acttttatat 857  Q
    | ||||||||    
T  40736546 atttttatat 40736537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 773 - 866
Target Start/End: Original strand, 31013021 - 31013113
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgcatc 866  Q
    |||||||||||| |||  ||||||||| ||||| ||||||||||| || | | ||||||||||| | |||||||||||| || |||||||||||    
T  31013021 attctacttgaacctactatttgtagcctttgaatctagaattga-ttctaacacacaaatttagaattcaactcacttgtacatgaatgcatc 31013113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 755 - 820
Target Start/End: Complemental strand, 40147950 - 40147885
Alignment:
Q  755 attttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattt 820  Q
    |||||| || || |||||||||||||| ||||||  ||||| ||||||||||||||||||||||||    
T  40147950 attttgtcttcagaattgattctacttcaagctagaatttggagcttttgattctagaattgattt 40147885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 809
Target Start/End: Complemental strand, 7717423 - 7717367
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattct 809  Q
    |||||||||||||| |||||||||||||||||||||  | ||||||||| |||||||    
T  7717423 tgattttgcctccagaattgattctacttgaagctagaaattgtagcttctgattct 7717367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 753 - 812
Target Start/End: Complemental strand, 1441483 - 1441424
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctaga 812  Q
    |||||||| ||| ||||| || |||||||||| ||| |||||||||||||||||||||||    
T  1441483 tgattttgtctctataatcgactctacttgaaactaggatttgtagcttttgattctaga 1441424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 787 - 854
Target Start/End: Complemental strand, 46853602 - 46853536
Alignment:
Q  787 tatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 854  Q
    ||||||| | ||||||||||||||||||||| |||| | || ||||||||| ||||||||||||||||    
T  46853602 tatgattcggagcttttgattctagaattga-ttttaacactcaaatttattgttcaactcactttta 46853536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 756 - 822
Target Start/End: Original strand, 44771680 - 44771746
Alignment:
Q  756 ttttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||  |||||||||||| | || |||  |||||||||||||||||||| |||||||||||    
T  44771680 ttttgcctccggaattgattctacctaaatctagaatttgtagcttttgattctaaaattgattttt 44771746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 773 - 822
Target Start/End: Original strand, 42375528 - 42375577
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  42375528 attctacttgaagctataatttgtagcgtttgatcatagaattgattttt 42375577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 773 - 822
Target Start/End: Original strand, 42404242 - 42404291
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttt 822  Q
    ||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  42404242 attctacttgaagctataatttgtagcgtttgatcatagaattgattttt 42404291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 773 - 844
Target Start/End: Original strand, 31492770 - 31492839
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaa 844  Q
    |||||| ||||||| |  |||||||||||||||||||||||||||  ||| | ||||||||||||| |||||    
T  31492770 attctatttgaagcaactatttgtagcttttgattctagaattga--tttaacacacaaatttataattcaa 31492839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 821
Target Start/End: Complemental strand, 44958708 - 44958640
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||||||||||||| | ||||||||||| || ||||  | ||| ||||||||||||||||| |||||||    
T  44958708 tgattttgcctccagagttgattctactcgatgctagaaattggagcttttgattctagaaatgatttt 44958640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 862
Target Start/End: Original strand, 5406889 - 5406995
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||||||| | ||| ||||||||| |||||||  | | ||||||| ||||| ||||||||||||||   | |||||||||   ||||| |||||||    
T  5406889 tgattttgcctctagaatggattctactcgaagctagaaatggtagcttctgattatagaattgattttt---aaacaaatttactcttcaaatcacttt 5406985  T
Q  853 tatatgaatg 862  Q
    || |||||||    
T  5406986 tacatgaatg 5406995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 860
Target Start/End: Complemental strand, 27266876 - 27266790
Alignment:
Q  773 attctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaa 860  Q
    ||||||||||||||||  | ||||||||  |||||| |||||| | |||||| || ||||||||| |||||||| ||||||| |||||    
T  27266876 attctacttgaagctagaaattgtagctaatgattcaagaatt-aatttttacactcaaatttattgttcaactaacttttacatgaa 27266790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 857
Target Start/End: Original strand, 44463557 - 44463662
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattga--ttttttaaacacaaatttatagttcaactcact 850  Q
    ||||||||||| ||||||| ||||||||||||| |  || ||||| ||||||||| || |||| |  ||||||| |||||| | ||||| ||||||||||    
T  44463557 tgattttgccttcataattaattctacttgaagttgaga-ttgtaacttttgattttaaaattaattttttttacacacaactatatagctcaactcact 44463655  T
Q  851 tttatat 857  Q
    || ||||    
T  44463656 ttcatat 44463662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 821
Target Start/End: Original strand, 32111992 - 32112046
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagctttt-gattctagaattgatttt 821  Q
    |||||||||||||||||||||  ||||||||||||| | || |||||||||||||    
T  32111992 aattgattctacttgaagctacaatttgtagcttttggcttttagaattgatttt 32112046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 862
Target Start/End: Complemental strand, 35264513 - 35264405
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacac--aaatttatagttcaactcact 850  Q
    ||||| |||||||| |  |||||||||||||| |||  | ||  |||||||||||||||||||||||||   |||||  |||||||| |||||| ||| |    
T  35264513 tgattctgcctccaaatatgattctacttgaaactagaaattagagcttttgattctagaattgatttt---aacacttaaatttattgttcaagtcatt 35264417  T
Q  851 tttatatgaatg 862  Q
    |||| |||||||    
T  35264416 tttacatgaatg 35264405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 821
Target Start/End: Original strand, 40339224 - 40339278
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagc-ttttgattctagaattgatttt 821  Q
    |||||||||||||||||||||  ||||||||| ||||| ||||| ||||||||||    
T  40339224 aattgattctacttgaagctacaatttgtagctttttgcttctacaattgatttt 40339278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 821
Target Start/End: Complemental strand, 41115449 - 41115395
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagctttt-gattctagaattgatttt 821  Q
    |||||||||||||||||||||  ||||||||||||| | ||||| ||||||||||    
T  41115449 aattgattctacttgaagctagaatttgtagcttttggcttctacaattgatttt 41115395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 862
Target Start/End: Complemental strand, 41596211 - 41596143
Alignment:
Q  793 ttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||||  ||||||||| ||||| |||||| |||||||||  ||||||||||  |||||||    
T  41596211 ttgtagcttttgattaaagaattgat-ttttacacacaagtttatagtttgactcacttttccatgaatg 41596143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 748 - 821
Target Start/End: Original strand, 31804 - 31877
Alignment:
Q  748 aaaaatgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgatttt 821  Q
    |||| ||||| |||||||| |||||||| |||||||||||| |||||||||||||||||| | |||||||||||    
T  31804 aaaattgattctgcctccaaaattgattatacttgaagctaggatttgtagcttttgattattgaattgatttt 31877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 753 - 854
Target Start/End: Complemental strand, 23695 - 23595
Alignment:
Q  753 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 852  Q
    |||||||| |||||||| | ||||||  |||||||| |||||||||||||||| ||||||  ||| |||||| ||  ||||||||  |||||||||||||    
T  23695 tgattttgtctccataaataattctaactgaagctaggatttgtagcttttgaatctagacgtga-tttttagactaaaatttatcattcaactcacttt 23597  T
Q  853 ta 854  Q
    ||    
T  23596 ta 23595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 768 - 862
Target Start/End: Complemental strand, 14200 - 14108
Alignment:
Q  768 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatg 862  Q
    |||||||||||||||||||||  | |  |||||| |||||||||||||||| ||||| || |||||||||  ||||||||||||| | |||||||    
T  14200 aattgattctacttgaagctagcaatc-tagcttatgattctagaattgat-ttttacactcaaatttatttttcaactcactttcacatgaatg 14108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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