View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3226_1D_low_7 (Length: 421)
Name: NF3226_1D_low_7
Description: NF3226_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3226_1D_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 22 - 411
Target Start/End: Original strand, 26031611 - 26031997
Alignment:
| Q |
22 |
aatgacttcaacaaacttagcaaaataccagatcaggtagctcacaagcatgggtcgaaatagtttccgatttgataaatagatctttaaaattgttaat |
121 |
Q |
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| T |
26031611 |
aatgacttcaacaaacttagcaaaataccagatcaggtagctcacaagcattggtcgaaatagtt-ccgatttgataaatagatctttaaaattgttaat |
26031709 |
T |
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| Q |
122 |
ttcatccaaaatggtccatccgttgacttctactattggagctatgatgtggcacgttaacgggatatactacattgcatgttgatctcacattaaggtc |
221 |
Q |
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| T |
26031710 |
ttcatccaaaatggtccatccgttgacttctactattggagctatgacgtggaacattaaccaaatatgctacattgcatgttcatcccacgttgacgtc |
26031809 |
T |
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| Q |
222 |
atccaactagtgcctatgaaattcaggtcttcttaaggataaatttgtcggtaattattgataaatcagtccgtaagaaacctaaacttcatagacagac |
321 |
Q |
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|||| | ||||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||| || |
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| T |
26031810 |
atcccattagtgcctatgaaattcaggtcttcttggggacaaatttgtcagtaattattggtaaatcagtcggtaagaaacctaaacttgatagac--ac |
26031907 |
T |
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| Q |
322 |
gtcaattcgcaatgtggggacatttatgtgggatcaacgtggaagggtcatatatttaataaacgtgtcacatggtactaattggaactc |
411 |
Q |
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||||||||||||| || ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| |
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| T |
26031908 |
gtcaattcgcaatttgatgacatttatgtgggatcaatgtggaagggccatgtatttaataaacgtgtcacatcatactaattggaactc |
26031997 |
T |
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