View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3226_high_1 (Length: 845)
Name: NF3226_high_1
Description: NF3226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3226_high_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 823; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 823; E-Value: 0
Query Start/End: Original strand, 1 - 839
Target Start/End: Complemental strand, 23597375 - 23596537
Alignment:
| Q |
1 |
accccttggagcaggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597375 |
accccttggagcaggaggaatacccgacagctcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcaca |
23597276 |
T |
|
| Q |
101 |
ccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597275 |
ccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtct |
23597176 |
T |
|
| Q |
201 |
ccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccata |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597175 |
ccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccata |
23597076 |
T |
|
| Q |
301 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597075 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
23596976 |
T |
|
| Q |
401 |
acaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttgagct |
500 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596975 |
acaagaacaacatcatcaacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttgagct |
23596876 |
T |
|
| Q |
501 |
cttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctctt |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596875 |
cttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctctt |
23596776 |
T |
|
| Q |
601 |
agctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcacc |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596775 |
agctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcacc |
23596676 |
T |
|
| Q |
701 |
atcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaag |
800 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596675 |
atcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaag |
23596576 |
T |
|
| Q |
801 |
ttccaccaccaagatcgaaaataagaacgttcttctcac |
839 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596575 |
ttccaccaccaagatcgaaaataagaacgttcttctcac |
23596537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 659; E-Value: 0
Query Start/End: Original strand, 1 - 839
Target Start/End: Complemental strand, 23588523 - 23587685
Alignment:
| Q |
1 |
accccttggagcaggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcaca |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |||| |
|
|
| T |
23588523 |
accccttggagcaggagggatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttcgccttcatagacttgaatcaacaca |
23588424 |
T |
|
| Q |
101 |
ccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtct |
200 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||||||||| |||||||| |||| |
|
|
| T |
23588423 |
ccaggttgattatcagagtaggttgaaaacacttgctccttcttggtaggaatggttgtgtttctaggaatcaatacagtcatgacacctcctgcggtct |
23588324 |
T |
|
| Q |
201 |
ccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccata |
300 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| || || |||||||||||||||||||| || || ||||| |
|
|
| T |
23588323 |
ccaaaccaagggagagaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagcttggacggctgccccata |
23588224 |
T |
|
| Q |
301 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
400 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
23588223 |
tgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccacca |
23588124 |
T |
|
| Q |
401 |
acaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttgagct |
500 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
23588123 |
acaagaacaacatcatggacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaacagatccatgttgagct |
23588024 |
T |
|
| Q |
501 |
cttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctctt |
600 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
23588023 |
cttcaaaacgagcccgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctctt |
23587924 |
T |
|
| Q |
601 |
agctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcacc |
700 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587923 |
agctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcacc |
23587824 |
T |
|
| Q |
701 |
atcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaag |
800 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
23587823 |
atcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttgacctcaaagataccttcctcaatagtaagtagggaaacatcaaaag |
23587724 |
T |
|
| Q |
801 |
ttccaccaccaagatcgaaaataagaacgttcttctcac |
839 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587723 |
ttccaccaccaagatcgaaaataagaacgttcttctcac |
23587685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 89 - 833
Target Start/End: Original strand, 54395889 - 54396633
Alignment:
| Q |
89 |
tgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactc |
188 |
Q |
| |
|
||||||| ||||||||||||||||| || || || || || | |||||||||||| |||||||| || ||||| || ||||| || ||||| || | |
|
|
| T |
54395889 |
tgaatcaaaacaccaggttggttatctgagtaagttgagaaaatctgctccttcttcgtaggaatcgtcgtgttccttggaatcaaagtcgtcataacac |
54395988 |
T |
|
| Q |
189 |
ctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggac |
288 |
Q |
| |
|
| || ||||| ||||| || | ||||||||||||||| ||||||| |||||| || || || |||| ||||| ||||||||||| || ||||| || |
|
|
| T |
54395989 |
caccagcagtttccaaccccaaactaagaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaac |
54396088 |
T |
|
| Q |
289 |
tgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatccta |
388 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| || ||||| ||||| || |||||| |||||||||| |||||||| |||||||| || |||||||| |
|
|
| T |
54396089 |
agcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatcctt |
54396188 |
T |
|
| Q |
389 |
gtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagat |
488 |
Q |
| |
|
|| ||||| |||||||||||||| | || ||| ||||||| |||||||||||||| | ||||||||||||||| |||||||| |||||||| | || |
|
|
| T |
54396189 |
gttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaat |
54396288 |
T |
|
| Q |
489 |
ccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagagga |
588 |
Q |
| |
|
|||| || | |||||||| | || | ||||| || | || || ||||| || |||||||||||||||||||| || || || |||||||| || || |
|
|
| T |
54396289 |
ccatattcaattcttcaaatctcgcccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaaga |
54396388 |
T |
|
| Q |
589 |
aagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaaca |
688 |
Q |
| |
|
||| || |||||||||||||||||||| ||||| || || || | ||| |||| ||| ||||||||||| |||||||| |||||| | || || |||| |
|
|
| T |
54396389 |
aagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaaca |
54396488 |
T |
|
| Q |
689 |
aaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtg |
788 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| || | ||| ||||||||||| ||||||||||| || ||||| ||||| |||||||||||||| | |
|
|
| T |
54396489 |
aaatgattcaccattctgttatcaaaatcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagag |
54396588 |
T |
|
| Q |
789 |
aaacatcaaaagttccaccaccaagatcgaaaataagaacgttct |
833 |
Q |
| |
|
||||||| ||||||||||| || | || |||||||| ||||||| |
|
|
| T |
54396589 |
aaacatcgaaagttccacctcccaagtcaaaaataagcacgttct |
54396633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 277 - 444
Target Start/End: Original strand, 35132110 - 35132278
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
|||||| || ||||| || |||||||| ||||||||||| ||||| |||||||| || | |||||||| |||| || | |||||| || || || || |
|
|
| T |
35132110 |
agcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcact |
35132209 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacac-tgttcttatccatcttagcatc |
444 |
Q |
| |
|
||||||||||||| || || |||||||||||||||| ||| || | || |||| |||||||||||||| |
|
|
| T |
35132210 |
ttgggaatcctagaagaccctccaacaagaacaacatcatctacccttgctcttgtccatcttagcatc |
35132278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 269 - 410
Target Start/End: Complemental strand, 9336413 - 9336272
Alignment:
| Q |
269 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagtt |
368 |
Q |
| |
|
||||||||||||||||| || || || |||||||||||||||||||| |||||||| | | | | | ||||||||| |||| || ||| |||| |||| |
|
|
| T |
9336413 |
ctcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgatacccatgaataattccttccccttgaaaaattctagcaatagtt |
9336314 |
T |
|
| Q |
369 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaa |
410 |
Q |
| |
|
||| || || |||||||||| ||| || || |||||||||| |
|
|
| T |
9336313 |
cttgcactttcggaatcctagacgagccacccacaagaacaa |
9336272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 770 - 819
Target Start/End: Original strand, 35132595 - 35132644
Alignment:
| Q |
770 |
tcctcaatagtaagaagtgaaacatcaaaagttccaccaccaagatcgaa |
819 |
Q |
| |
|
|||| ||||||||| | ||||||||||||||| ||||||||||||||||| |
|
|
| T |
35132595 |
tccttaatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaa |
35132644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 423
Target Start/End: Original strand, 30774930 - 30775052
Alignment:
| Q |
301 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
400 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| || | ||||||||| ||||||||| |||| |||| || || ||||||||||||| || || || |
|
|
| T |
30774930 |
agcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccg |
30775029 |
T |
|
| Q |
401 |
acaagaacaacattatcgacact |
423 |
Q |
| |
|
|||||||||| || ||| ||||| |
|
|
| T |
30775030 |
acaagaacaatatcatctacact |
30775052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 14 - 839
Target Start/End: Original strand, 8102058 - 8102883
Alignment:
| Q |
14 |
ggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcacaccaggttggttat |
113 |
Q |
| |
|
|||||||| || || | ||||||||| |||||||| |||||||| || || ||||| || ||||| || || || |||| |||||||||||||| | |
|
|
| T |
8102058 |
ggaggaattccggaaagctcaaacttacccaacaagttgttatccttggttctggttctctcaccttcataaacttggatcaaaacaccaggttggttgt |
8102157 |
T |
|
| Q |
114 |
cagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtctccaaaccaaggga |
213 |
Q |
| |
|
| ||||| || || || || |||||||||||||| ||||| || ||||| || ||||| || ||||||||||| |||||||||||||||||||| | || |
|
|
| T |
8102158 |
ctgaatacgtagagaaaacttgctccttcttggttggaatggtagtgttccttggaatcaatacagtcatgacacctcctgcagtctccaaaccttgaga |
8102257 |
T |
|
| Q |
214 |
aagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctca |
313 |
Q |
| |
|
| || || ||||||| | ||| | ||| || || |||||||| ||||| || ||||| ||||||||||| || || || ||||||||||||||||| |
|
|
| T |
8102258 |
caatggggtgacatccaaaagcaacaaatcttgaaccttctcatttccttcaccactcaagatagcagcttgaacagcggcaccataagcaacagcctcg |
8102357 |
T |
|
| Q |
314 |
tcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacat |
413 |
Q |
| |
|
|| ||||||||||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||||||||||||| || || |||||||||||||||| |
|
|
| T |
8102358 |
tcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagttgctgaactttgggaatcctagttgaaccaccaacaagaacaacat |
8102457 |
T |
|
| Q |
414 |
tatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagc |
513 |
Q |
| |
|
|| || || |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| || || ||||| | || |
|
|
| T |
8102458 |
catgaactgtgctcttgtccatcttagcatctctcaaacacttctcaacaggctccatacacttcctgaacagatccatgttaagttcctcaaatctggc |
8102557 |
T |
|
| Q |
514 |
gcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaa |
613 |
Q |
| |
|
|| || || || |||||||| |||| ||||||||||||||||||||| |||||||| ||||| || || || || ||||| ||||| ||||||||||| |
|
|
| T |
8102558 |
acgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcggttgatgagagagttctcttcgctctctcacat |
8102657 |
T |
|
| Q |
614 |
gcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaa |
713 |
Q |
| |
|
|| |||||||| || ||||| ||||| || ||||| |||||||| ||||| ||||||||||| || ||||||||||||||| | ||||| |||||||||| |
|
|
| T |
8102658 |
gcggttctcaatctcctaagtgccctagggtttccgctaatatccttcttgttcttcctcttaaactcttgaacaaaatgggtaaccattctgttatcaa |
8102757 |
T |
|
| Q |
714 |
aatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaagttccaccaccaag |
813 |
Q |
| |
|
|||||||||| || | ||| |||||||| || ||||| || || ||||| ||||| || ||||||||||||||||| ||||||||||| |||||||| | |
|
|
| T |
8102758 |
aatcttcaccaccaagatgggtatcacctgcagtagccttaacttcaaatataccctcttcaatagtaagaagtgacacatcaaaagtaccaccacccaa |
8102857 |
T |
|
| Q |
814 |
atcgaaaataagaacgttcttctcac |
839 |
Q |
| |
|
||| || || | ||||||||||||| |
|
|
| T |
8102858 |
atcaaagatcaacacgttcttctcac |
8102883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 92 - 807
Target Start/End: Complemental strand, 8018112 - 8017397
Alignment:
| Q |
92 |
atcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctc |
191 |
Q |
| |
|
|||| |||||||||||||||||| || || || || || || |||||||||||||| |||||||| ||||| || |||||||| ||||||||||| || | |
|
|
| T |
8018112 |
atcaacacaccaggttggttatctgagtaagtagagaaaacttgctccttcttggttggaattgtggtgttccttggaattaatacagtcatgacaccac |
8018013 |
T |
|
| Q |
192 |
ctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgc |
291 |
Q |
| |
|
| ||||| || | ||| || || | ||||| ||||||| | || | ||| || || || ||||||||||| || |||||||| || ||||| || || |
|
|
| T |
8018012 |
cagcagtttctagacccagagacaatggagtgacatccaaaagcagcaaatcttgaaccttttcattgccttcaccactcaaaattgctgcttgtacagc |
8017913 |
T |
|
| Q |
292 |
agcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtc |
391 |
Q |
| |
|
|| ||||||||||||||||| || |||||||| ||||| ||||| || || ||| |||||||||||||||| ||||| ||||| |||||||| ||||| |
|
|
| T |
8017912 |
ggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaagaaatcttgcaacagttgctgaactttgggaattctagtt |
8017813 |
T |
|
| Q |
392 |
gatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatcca |
491 |
Q |
| |
|
|| ||||||||||||||||||| || ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| || || ||||||| |
|
|
| T |
8017812 |
gaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttagcatctctcaaacacttctcaacaggctccatacactttctgaacagatcca |
8017713 |
T |
|
| Q |
492 |
tgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaag |
591 |
Q |
| |
|
|||| || || ||||| | || || || || || |||||||| |||| ||||||||||||||||||||| |||||||| ||||| |||||||| || || |
|
|
| T |
8017712 |
tgttaagttcctcaaatcttgcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagtagaagagag |
8017613 |
T |
|
| Q |
592 |
agtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaa |
691 |
Q |
| |
|
||| ||||| |||||||||||||| || |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || || ||||||||| |
|
|
| T |
8017612 |
agttctcttcgctctctcacaagctgtcctcaacctcctaagtgctctagggtttccactaatatccttcttgttcttcctcttaaactcctgaacaaaa |
8017513 |
T |
|
| Q |
692 |
tggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaa |
791 |
Q |
| |
|
|| || ||||| ||||| |||||||||||||| || | ||| ||||||||||| ||||| || || ||||| ||||| || |||||||||||||| || | |
|
|
| T |
8017512 |
tgattaaccattctgttgtcaaaatcttcaccaccaagatgggtatcaccagcagtagccttaacttcaaaaataccctcttcaatagtaagaagagaca |
8017413 |
T |
|
| Q |
792 |
catcaaaagttccacc |
807 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
8017412 |
catcaaaagtaccacc |
8017397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 11 - 813
Target Start/End: Original strand, 39985034 - 39985836
Alignment:
| Q |
11 |
gcaggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcacaccaggttggt |
110 |
Q |
| |
|
||||||||||| || || | ||||||||||||||||||||||| || | || ||||| || |||||||| | || || |||| ||| ||||| |||| |
|
|
| T |
39985034 |
gcaggaggaatgccggaaagttcaaacttgcccaacaaattgttgtctcttgttcttgtcctctctccttcaaaaacttggatcaacacgccaggctggt |
39985133 |
T |
|
| Q |
111 |
tatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtctccaaaccaag |
210 |
Q |
| |
|
| |||||||| || || || ||||| || ||||| || ||||| || || || || || || | ||||||||| || || || ||||||||||||||||| |
|
|
| T |
39985134 |
tgtcagaatatgtagagaaaacctgttctttctttgttggaatagtggtattccttgggataagcacagtcatcacaccaccagcagtctccaaaccaag |
39985233 |
T |
|
| Q |
211 |
ggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcc |
310 |
Q |
| |
|
|| ||||| || ||||||| | | ||||||||| || ||||||||||| || || ||||| |||||||| || || ||||| ||||| ||||||||| |
|
|
| T |
39985234 |
agatagaggggtgacatccaaaaggagaagatcctgaaccttctcattgccctcaccactcaagatagcagcctgaacagcagcaccatatgcaacagcc |
39985333 |
T |
|
| Q |
311 |
tcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaa |
410 |
Q |
| |
|
|||||||| || |||||||| || || ||||| || | ||||||||||||||||||||||||||||| ||||| || || || || || ||||| |||| |
|
|
| T |
39985334 |
tcatcaggatttatgctcttgcatagctcctttccgttaaagaaatcttgcaaaagttgttgaacctttggaattctggtagaacctcctacaaggacaa |
39985433 |
T |
|
| Q |
411 |
cattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacg |
510 |
Q |
| |
|
||| | |||||| ||||| |||||||| ||||| |||||||| |||||||| ||||||||||| || ||||| ||||||||||||||||| ||||| | |
|
|
| T |
39985434 |
catcgtggacacttttcttgtccatcttggcatctctcaaacatttctcaactggctccatacattttctaaagagatccatgttgagctcctcaaatct |
39985533 |
T |
|
| Q |
511 |
agcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctca |
610 |
Q |
| |
|
|| |||||||||| | ||| || ||||| || ||||| | ||||||||||||||||||||| || |||||||| || ||||| ||||| ||||| ||| |
|
|
| T |
39985534 |
tgcacgagtaatgggggagtagaaatcaattccttcaaaaagagaatcaatttcaatggtggtctgggcagtagaagagagagttctcttcgctctttca |
39985633 |
T |
|
| Q |
611 |
caagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttat |
710 |
Q |
| |
|
|||||||| |||||||| |||||||| || || || ||||| || || ||||| ||||| |||||||| ||||||||||| ||||||||||| ||||| | |
|
|
| T |
39985634 |
caagcagtcctcaacctcctaagagctctggggttgccactgatgtccttcttgttctttctcttgaactcttgaacaaagtggttcaccattctgttgt |
39985733 |
T |
|
| Q |
711 |
caaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaagttccaccacc |
810 |
Q |
| |
|
||||||| |||||||| | ||| || || || ||||| |||||||||||||||||||| || |||||||| || | || ||||||||||| |||||||| |
|
|
| T |
39985734 |
caaaatcctcacctccaagatgggtgtctccggctgtggctttcacctcaaagataccctcttcaatagttagcaaagagacatcaaaagtaccaccacc |
39985833 |
T |
|
| Q |
811 |
aag |
813 |
Q |
| |
|
||| |
|
|
| T |
39985834 |
aag |
39985836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 277 - 476
Target Start/End: Original strand, 17259895 - 17260094
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
|||||| || || ||||| ||||||||||||||||||||||||||||||||||| || | |||||| || |||||||||| ||||| ||||| || || |
|
|
| T |
17259895 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcact |
17259994 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
476 |
Q |
| |
|
|| |||||||||| ||||| |||||||| ||||||| ||| | ||| |||| || |||||| |||| || | ||||||||||||| |||||| |||| |
|
|
| T |
17259995 |
ttcggaatcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaacaatctccatgcact |
17260094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 277 - 444
Target Start/End: Original strand, 8575980 - 8576147
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||| |||| | || || || || ||| || |
|
|
| T |
8575980 |
agcagcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcact |
8576079 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatc |
444 |
Q |
| |
|
|| |||||||||| || || |||||||| ||||||| ||| ||||| ||||| |||||||||||||| |
|
|
| T |
8576080 |
ttaggaatcctagaagaaccaccaacaaggacaacatcatctacactattcttgtccatcttagcatc |
8576147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 277 - 476
Target Start/End: Original strand, 17267593 - 17267792
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
|||||| || || ||||| ||||||||||||||||||||||||||||| || || || | ||||||||| ||||||| | ||||| ||||| || || |
|
|
| T |
17267593 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcact |
17267692 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
476 |
Q |
| |
|
|| |||||||||| || || |||||||| ||||||| ||| || ||| |||| || ||||||||||| || | ||||||||||||| |||||| |||| |
|
|
| T |
17267693 |
ttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaacaatctccatgcact |
17267792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 277 - 443
Target Start/End: Original strand, 8590292 - 8590458
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
||||||||| || || || |||||||||||||||||||| || |||||||| || |||| |||||||| | || || |||||||| || || || || |
|
|
| T |
8590292 |
agcagcttgaacagctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcact |
8590391 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcat |
443 |
Q |
| |
|
||||||||||||| || || |||||||| ||||||| ||| ||| ||||||| ||||||||||||| |
|
|
| T |
8590392 |
ttgggaatcctagaagaaccaccaacaagtacaacatcatctacaatgttcttgtccatcttagcat |
8590458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 587 - 816
Target Start/End: Complemental strand, 8383080 - 8382851
Alignment:
| Q |
587 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
686 |
Q |
| |
|
||||| ||||| || || ||||| ||||| ||||| ||||||||||||||| |||| || |||||||| || || |||| |||||||||||| || | || |
|
|
| T |
8383080 |
gaaagtgtcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaa |
8382981 |
T |
|
| Q |
687 |
caaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaag |
786 |
Q |
| |
|
|||| | ||||| || |||||||| || ||||||||||| | ||| || || || || || || ||||| |||||| | | || ||| || || || |
|
|
| T |
8382980 |
caaagtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaattgtgaggag |
8382881 |
T |
|
| Q |
787 |
tgaaacatcaaaagttccaccaccaagatc |
816 |
Q |
| |
|
|| |||||||||||||||||||||||||| |
|
|
| T |
8382880 |
agacacatcaaaagttccaccaccaagatc |
8382851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 8636856 - 8636791
Alignment:
| Q |
278 |
gcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttc |
343 |
Q |
| |
|
||||| |||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
8636856 |
gcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttc |
8636791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 444
Target Start/End: Original strand, 8609571 - 8609738
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| |||| | ||||| ||| |||| || ||||||| || || | || |
|
|
| T |
8609571 |
agcagcctggacagcagcaccataagcaaccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcact |
8609670 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatc |
444 |
Q |
| |
|
|| |||||||||| || || |||||||||||||||| ||| || | ||||||||||| | |||||| |
|
|
| T |
8609671 |
ttcggaatcctagaagaacctccaacaagaacaacatcatctacggttttcttatccatttcagcatc |
8609738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 277 - 483
Target Start/End: Original strand, 8601628 - 8601834
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||| |||| ||||||| | |||| || |||| || | |||||| || |
|
|
| T |
8601628 |
agcagcttgaactgctgcgccataggcaactgcctcatcaggattgatgctcacgcaaatgtccttccaattgaaaaattctttcagtaattgttgcact |
8601727 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
476 |
Q |
| |
|
||||||||||||| || ||||||||||| ||| ||| ||| ||||| |||| || |||| |||||| || | ||| | ||||||| ||| ||||||| |
|
|
| T |
8601728 |
ttgggaatcctagaagaaccgccaacaaggacagcatcatccacactactcttttcgatctgagcatcactaagacaactttcaacagtctctatacact |
8601827 |
T |
|
| Q |
477 |
tcctaaa |
483 |
Q |
| |
|
|| |||| |
|
|
| T |
8601828 |
tcttaaa |
8601834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 266 - 351
Target Start/End: Original strand, 8537679 - 8537764
Alignment:
| Q |
266 |
ccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaa |
351 |
Q |
| |
|
|||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||| ||||| |
|
|
| T |
8537679 |
ccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaa |
8537764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 587 - 728
Target Start/End: Original strand, 8581664 - 8581805
Alignment:
| Q |
587 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
686 |
Q |
| |
|
||||| ||||| || ||||||||||||||||| ||||||||||||| || ||||||||||| |||| || | |||| || |||||||| || | |
|
|
| T |
8581664 |
gaaagtgtccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgaca |
8581763 |
T |
|
| Q |
687 |
caaaatggttcaccatcctgttatcaaaatcttcacctccca |
728 |
Q |
| |
|
|||| || |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
8581764 |
caaagtgattcaccattctgttatcaaaatcttcccctccca |
8581805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 277 - 444
Target Start/End: Original strand, 8545287 - 8545454
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
|||||| ||||| || || |||||||||||||||||||||||||| |||||||| || | ||||||||| | || || || || || || ||| || |
|
|
| T |
8545287 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcact |
8545386 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatc |
444 |
Q |
| |
|
|| |||||||||| || ||||||||||| ||||||| ||| ||||| ||| |||||||||||||| |
|
|
| T |
8545387 |
ttaggaatcctagaagaaccgccaacaaggacaacatcatctacactacccttgtccatcttagcatc |
8545454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 8581367 - 8581422
Alignment:
| Q |
290 |
gcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttccc |
345 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
8581367 |
gcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttccc |
8581422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 413
Target Start/End: Original strand, 6789156 - 6789302
Alignment:
| Q |
267 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaag |
366 |
Q |
| |
|
||||||| | |||||| ||||| || || || |||||||||||||||||||||||||||||| | || | ||||| || |||| | |||||||| || |
|
|
| T |
6789156 |
cgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatag |
6789255 |
T |
|
| Q |
367 |
ttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacat |
413 |
Q |
| |
|
|||||| || |||||||| |||| || || |||||||| ||||||| |
|
|
| T |
6789256 |
ttgttgcactttgggaattctagaagacccaccaacaaggacaacat |
6789302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 277 - 498
Target Start/End: Complemental strand, 8383390 - 8383169
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||||| ||||| || |||||| |||||| ||||||| | |||| || | |||||| || | ||| || |
|
|
| T |
8383390 |
agcagctttaactgctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcact |
8383291 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
476 |
Q |
| |
|
||||||||||| | || || || | |||||||||| ||| ||||| |||| | |||||||||||| | | ||| ||||||||| ||||||||||| |
|
|
| T |
8383290 |
ttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctcaacagtctccatacact |
8383191 |
T |
|
| Q |
477 |
tcctaaatagatccatgttgag |
498 |
Q |
| |
|
| |||||| ||||| ||||| |
|
|
| T |
8383190 |
tttcaaataggtccatattgag |
8383169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 444
Target Start/End: Complemental strand, 7878228 - 7878080
Alignment:
| Q |
296 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
395 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| | |||| |||||||| | || || || ||||| || || || || ||| ||||||||| |||| |
|
|
| T |
7878228 |
ccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatc |
7878129 |
T |
|
| Q |
396 |
cgccaacaagaacaacattatcgacactgttcttatccatcttagcatc |
444 |
Q |
| |
|
| |||||||| ||||||| ||| ||| ||||||| |||||| ||||||| |
|
|
| T |
7878128 |
caccaacaagtacaacatcatctacattgttcttgtccatcatagcatc |
7878080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 593 - 714
Target Start/End: Complemental strand, 7877931 - 7877810
Alignment:
| Q |
593 |
gtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaat |
692 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||| ||||| ||||| || ||||||| ||| || |||||||||||||| || || || |||| |
|
|
| T |
7877931 |
gtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaat |
7877832 |
T |
|
| Q |
693 |
ggttcaccatcctgttatcaaa |
714 |
Q |
| |
|
|||||| ||| ||||||||||| |
|
|
| T |
7877831 |
ggttcaacattctgttatcaaa |
7877810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 587 - 660
Target Start/End: Original strand, 8609881 - 8609954
Alignment:
| Q |
587 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatcttt |
660 |
Q |
| |
|
||||| |||||||| || |||||||||||||| |||||||| ||||||||||| | || ||||| |||||||| |
|
|
| T |
8609881 |
gaaagtgtcctctttgccctctcacaagcagtcctcaacctcctaagagccctcgagttcccactgatatcttt |
8609954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 29582336 - 29582243
Alignment:
| Q |
296 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctag |
389 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | || | |||||||| |||| || |||||||| || || || || |||||||| |||| |
|
|
| T |
29582336 |
ccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgggaattctag |
29582243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 3146918 - 3146974
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttaca |
333 |
Q |
| |
|
||||||||| || || || ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
3146918 |
agcagcttgcacagctgcaccataagcaacggcctcatcagggttgatgctgttaca |
3146974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 8654096 - 8654151
Alignment:
| Q |
269 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
324 |
Q |
| |
|
|||||||||||||| || || ||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
8654096 |
ctcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgat |
8654151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 10494896 - 10494841
Alignment:
| Q |
269 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
324 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| |
|
|
| T |
10494896 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
10494841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 13333890 - 13333835
Alignment:
| Q |
269 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
324 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| |
|
|
| T |
13333890 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
13333835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 782 - 816
Target Start/End: Original strand, 8602133 - 8602167
Alignment:
| Q |
782 |
agaagtgaaacatcaaaagttccaccaccaagatc |
816 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8602133 |
agaagagaaacatcaaaagttccaccaccaagatc |
8602167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 330
Target Start/End: Complemental strand, 27846597 - 27846567
Alignment:
| Q |
300 |
aagcaacagcctcatcagggttgatgctctt |
330 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27846597 |
aagcaacagcctcatcagggttgatgctctt |
27846567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 127; Significance: 4e-65; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 287 - 813
Target Start/End: Complemental strand, 17717191 - 17716665
Alignment:
| Q |
287 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
386 |
Q |
| |
|
||||| || ||||| |||||||||||||| || || |||||||| || || ||||| | | |||||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
17717191 |
actgccgcaccatatgcaacagcctcatcgggattaatgctcttgcatagctcctttctgttaaagaaatcctgcaatagttgttgaacctttggaattc |
17717092 |
T |
|
| Q |
387 |
tagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
486 |
Q |
| |
|
| || || || || ||||| ||||||| || |||||| || | |||| ||||| |||||||| |||||||| |||||||||| | ||| || || |
|
|
| T |
17717091 |
tggtagaacctcctacaaggacaacatcatggacacttcctttgtacatcccagcatggctcaaacatttctcaacttgctccatacattccctgaagag |
17716992 |
T |
|
| Q |
487 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
586 |
Q |
| |
|
||||| ||||||||||||||| | || |||||||||| || || || ||||| |||||||| | | ||||||||||||||||||| || |||||||| |
|
|
| T |
17716991 |
atccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggcagtagat |
17716892 |
T |
|
| Q |
587 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
686 |
Q |
| |
|
|| |||| ||||| || |||||||||||||| |||||||| ||||||| ||||| || |||||||| || ||||| ||||| |||||||| ||| ||| |
|
|
| T |
17716891 |
gatagagctctcttcgccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactctcgaa |
17716792 |
T |
|
| Q |
687 |
caaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaag |
786 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||| | ||| | || || ||||||||||| |||| |||| ||| || |||||||| || | |
|
|
| T |
17716791 |
caaagtggttcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagttagcaa |
17716692 |
T |
|
| Q |
787 |
tgaaacatcaaaagttccaccaccaag |
813 |
Q |
| |
|
|| ||||||||||| ||||||||||| |
|
|
| T |
17716691 |
agagacatcaaaagtaccaccaccaag |
17716665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 287 - 726
Target Start/End: Complemental strand, 17648545 - 17648106
Alignment:
| Q |
287 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
386 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || ||||| || || || ||||| || |||||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
17648545 |
actgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcaatagttgttgaacctttggaattc |
17648446 |
T |
|
| Q |
387 |
tagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
486 |
Q |
| |
|
| || || ||||| ||||| |||| || || |||||| || || |||||| ||||||| |||||||| ||||||| |||||||||| |||||||| || |
|
|
| T |
17648445 |
ttgtagaaccgcctacaaggacaatatcatggacactttttttgtccatcctagcatctctcaaacatatctcaacttgctccatacatttcctaaagag |
17648346 |
T |
|
| Q |
487 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
586 |
Q |
| |
|
||||||||||||||| ||||| | || |||||||||| | | | || ||||| ||||| || | | |||||||||||||||||||||| |||| | |
|
|
| T |
17648345 |
atccatgttgagctcctcaaatcttgcacgagtaatggaggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggagagtaaat |
17648246 |
T |
|
| Q |
587 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
686 |
Q |
| |
|
|| ||||| ||||| || ||||||||||||| |||||||| ||||||| ||||| || |||||||| || ||||| ||||| |||||||| |||||| |
|
|
| T |
17648245 |
gatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaacacttgaa |
17648146 |
T |
|
| Q |
687 |
caaaatggttcaccatcctgttatcaaaatcttcacctcc |
726 |
Q |
| |
|
|||| || |||||||| ||||||| |||||| |||||||| |
|
|
| T |
17648145 |
caaagtgattcaccattctgttattaaaatcctcacctcc |
17648106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 287 - 726
Target Start/End: Complemental strand, 17622449 - 17622010
Alignment:
| Q |
287 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
386 |
Q |
| |
|
|||||||| ||| | ||||||||||| || || || ||||| || || || ||||| || | |||||||| ||||| | |||||||||||| ||||| | |
|
|
| T |
17622449 |
actgcagcaccacacgcaacagcctcgtcgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattc |
17622350 |
T |
|
| Q |
387 |
tagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
486 |
Q |
| |
|
| || || || || ||||| ||||||| || |||||| | || |||||| |||||| |||||||| |||||||| |||||||||| |||||||| || |
|
|
| T |
17622349 |
tggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcatttctcaaacatttctcaacttgctccatacatttcctaaagag |
17622250 |
T |
|
| Q |
487 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
586 |
Q |
| |
|
|||||||||||||| |||||| || |||||||||| | | | || ||||| ||||| || | | |||||||||||||||||||||| ||||| | |
|
|
| T |
17622249 |
atccatgttgagcttttcaaatgtggcacgagtaatgggggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggacagtaaat |
17622150 |
T |
|
| Q |
587 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
686 |
Q |
| |
|
|| ||||| ||||| || ||||||||||||| |||||||| ||||||| ||||| || ||||| || || ||||| ||||| |||||||| ||||||| |
|
|
| T |
17622149 |
gatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactgatgtccttcttgttctttctcttgaactcttgaa |
17622050 |
T |
|
| Q |
687 |
caaaatggttcaccatcctgttatcaaaatcttcacctcc |
726 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||| |
|
|
| T |
17622049 |
caaagtggttcaccattctgttattaaaatcctcacctcc |
17622010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 287 - 813
Target Start/End: Complemental strand, 17718455 - 17717926
Alignment:
| Q |
287 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
386 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || |||||||| || || ||||| || | |||| ||| ||| | |||||||||||||| ||||| |
|
|
| T |
17718455 |
actgcagcaccatatgcaacagcctcatcgggattaatgctcttgcatagatcctttccgttaaagacatcctgccatagttgttgaacctttggaattt |
17718356 |
T |
|
| Q |
387 |
tagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
486 |
Q |
| |
|
| || || || || ||||| ||||||| || |||||| || | |||| |||| |||||||| |||||||| |||||||||| | ||| || || |
|
|
| T |
17718355 |
tggtagaacctcctacaaggacaacatcatggacacttcctttgttcatcccagcacgtctcaaacatttctcaacttgctccatacattccctgaagag |
17718256 |
T |
|
| Q |
487 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
586 |
Q |
| |
|
||||| ||||||||||||||| | || |||||||||| || || || ||||| |||||||| | | ||||||||||||||||||| || | |||||| |
|
|
| T |
17718255 |
atccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggaagtagat |
17718156 |
T |
|
| Q |
587 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
686 |
Q |
| |
|
|| |||| ||||| || |||||||||||||| |||||| | ||||||| ||||| || |||||||| || ||||| ||||| |||||||| ||||||| |
|
|
| T |
17718155 |
gatagagctctcttcgccctctcacaagcagtcctcaacttcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttgaa |
17718056 |
T |
|
| Q |
687 |
caaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagta---ag |
783 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||| | ||| | || || ||||||||||| |||| |||| ||| || ||||||||| || |
|
|
| T |
17718055 |
caaagtggttcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagtagttag |
17717956 |
T |
|
| Q |
784 |
aagtgaaacatcaaaagttccaccaccaag |
813 |
Q |
| |
|
| || ||||||||||| ||||||||||| |
|
|
| T |
17717955 |
caaagagacatcaaaagtaccaccaccaag |
17717926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 350 - 780
Target Start/End: Complemental strand, 17667124 - 17666694
Alignment:
| Q |
350 |
aagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctca |
449 |
Q |
| |
|
|||||||| ||||| | |||||||||||| ||||| || || || || || ||||| ||||||| || |||||| | || ||||||||||||| |||| |
|
|
| T |
17667124 |
aagaaatcctgcaataattgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttcttttgtccatcttagcatttctca |
17667025 |
T |
|
| Q |
450 |
aacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaa |
549 |
Q |
| |
|
|||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||| || ||||||||| | | | || ||||| ||||| || |
|
|
| T |
17667024 |
aacatttctcaacttgctccatacatttcctaaagagatccatgttgagctcttcaaatgtggcacgagtaatgaaggagcagaaatcaattccctcgaa |
17666925 |
T |
|
| Q |
550 |
caaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttcca |
649 |
Q |
| |
|
| | | ||||||||||||||||| ||||||||||| || |||| ||||| || |||||||||||||| | |||||| ||||||| ||||| || ||| |
|
|
| T |
17666924 |
tagacattcaatttcaatggtggtctgagcagtagatgatagagctctcttcgccctctcacaagcagtccccaacctcataagagctcttgggttgcca |
17666825 |
T |
|
| Q |
650 |
ctaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtag |
749 |
Q |
| |
|
|| || || || || ||||| || ||||| ||||||||||| || |||||||| ||||||| |||||| |||||||| | ||| | || || | ||||| |
|
|
| T |
17666824 |
ctgatgtccttgttgttctttcttttgaactcttgaacaaagtgattcaccattctgttattaaaatcctcacctccaagatgggggtctccggttgtag |
17666725 |
T |
|
| Q |
750 |
ctttcacctcaaagataccttcctcaatagt |
780 |
Q |
| |
|
|||| ||| ||| |||||| || |||||||| |
|
|
| T |
17666724 |
ctttaaccccaatgataccctcttcaatagt |
17666694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 350 - 726
Target Start/End: Complemental strand, 17704496 - 17704120
Alignment:
| Q |
350 |
aagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctca |
449 |
Q |
| |
|
|||||||| ||||| |||||||||||||| ||||| || || || || || ||||| ||||||| || |||||| | || |||||| ||||| |||| |
|
|
| T |
17704496 |
aagaaatcctgcaatagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcaaatctca |
17704397 |
T |
|
| Q |
450 |
aacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaa |
549 |
Q |
| |
|
|| ||||| |||| ||||||||| ||| |||| ||||||||||||||||||||||| | || ||||||||| | ||| | || || || |||| || |
|
|
| T |
17704396 |
aaagtttctcgacagtctccatacatttcataaagagatccatgttgagctcttcaaatctggcacgagtaatgatggtgaagaaatccattcccttgaa |
17704297 |
T |
|
| Q |
550 |
caaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttcca |
649 |
Q |
| |
|
||| || ||||||||||||||||||| |||| | || ||||| ||||| || ||||||||||||| |||||||| ||||||| ||| | | ||| |
|
|
| T |
17704296 |
taaacaaacaatttcaatggtggtttggagagtaaatgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctctttggtcgcca |
17704197 |
T |
|
| Q |
650 |
ctaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcc |
726 |
Q |
| |
|
|| || || ||| | ||||| |||||||| ||||||||||| | ||||||||| ||||||| |||||| |||||||| |
|
|
| T |
17704196 |
ctgatgtccttcctgttctttctcttgaactcttgaacaaagtagttcaccattctgttattaaaatcctcacctcc |
17704120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 287 - 507
Target Start/End: Complemental strand, 17706216 - 17705997
Alignment:
| Q |
287 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
386 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || ||||| || || || ||||| || |||||||| |||| | ||| ||||||||| ||||| | |
|
|
| T |
17706216 |
actgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcata-gtttttgaacctttggaattc |
17706118 |
T |
|
| Q |
387 |
tagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
486 |
Q |
| |
|
| || || || || ||||| ||||||| || |||||| || || |||||||||||||| |||||||| |||||||| |||||||||| |||||||| || |
|
|
| T |
17706117 |
tggtagaacctcctacaaggacaacatcatggacactttttttgtccatcttagcatctctcaaacatttctcaacttgctccatacatttcctaaagag |
17706018 |
T |
|
| Q |
487 |
atccatgttgagctcttcaaa |
507 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
17706017 |
atccatgttgagctcttcaaa |
17705997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 606 - 726
Target Start/End: Complemental strand, 17705923 - 17705803
Alignment:
| Q |
606 |
tctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcct |
705 |
Q |
| |
|
||||||||||||| ||| ||| ||||||| | ||| || |||||||| || ||||| ||||| |||||||| |||| |||||| ||||||||||| || |
|
|
| T |
17705923 |
tctcacaagcagtcctcgaccacataagagctcatgggttgccactaatgtccttcttcttctttctcttgaactcttaaacaaagtggttcaccattct |
17705824 |
T |
|
| Q |
706 |
gttatcaaaatcttcacctcc |
726 |
Q |
| |
|
||||| |||||| |||||||| |
|
|
| T |
17705823 |
gttattaaaatcctcacctcc |
17705803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 410
Target Start/End: Complemental strand, 12245920 - 12245787
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
||||||||| || || || ||||||||||||||||| |||||||| |||||||| || | ||||||||| |||| || || || || || ||||| || |
|
|
| T |
12245920 |
agcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggact |
12245821 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaa |
410 |
Q |
| |
|
||||||||||||| ||||| |||||||| |||| |
|
|
| T |
12245820 |
ttgggaatcctagaagatccaccaacaagtacaa |
12245787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 16662506 - 16662429
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaa |
354 |
Q |
| |
|
||||||||| || || || ||||||||||||||||||||||||||||||||||| || | ||||||||| ||||||| |
|
|
| T |
16662506 |
agcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
16662429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 43625058 - 43625116
Alignment:
| Q |
269 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgct |
327 |
Q |
| |
|
|||||||||||||| ||||| || || |||||||||||||||||||||||||| ||||| |
|
|
| T |
43625058 |
ctcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgct |
43625116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 277 - 413
Target Start/End: Original strand, 11999062 - 11999197
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
||||||||| || || || |||||||| ||||||||||||||||| |||||||| || | |||||||| |||| || || || || || ||||| || |
|
|
| T |
11999062 |
agcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggact |
11999161 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacat |
413 |
Q |
| |
|
||||| ||||||| ||||| |||||||| ||||||| |
|
|
| T |
11999162 |
ttggg-atcctagaagatccaccaacaagtacaacat |
11999197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 444
Target Start/End: Original strand, 12234364 - 12234510
Alignment:
| Q |
297 |
cataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatcc |
396 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||| || || |||||||| |||| ||||| ||||| ||||| || || ||||||||||||| || || |
|
|
| T |
12234364 |
cataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggaccc |
12234462 |
T |
|
| Q |
397 |
gccaacaagaacaacattatcgacactgttcttatccatcttagcatc |
444 |
Q |
| |
|
||||| ||| ||||| | ||| || || | || |||||||||||||| |
|
|
| T |
12234463 |
gccaataaggacaacttcatccaccctacttttgtccatcttagcatc |
12234510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 296 - 477
Target Start/End: Original strand, 12528177 - 12528358
Alignment:
| Q |
296 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | | ||||| || |||| || || ||||| || || | || ||||||||||||| ||| | |
|
|
| T |
12528177 |
ccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagc |
12528276 |
T |
|
| Q |
396 |
cgccaacaagaacaacattatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacactt |
477 |
Q |
| |
|
| |||||||| |||| || ||| ||||| |||| |||||||||||||| ||||||| | ||||| | |||||||||||| |
|
|
| T |
12528277 |
caccaacaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttcaacggtctccatacactt |
12528358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 444
Target Start/End: Original strand, 15594688 - 15594855
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
|||||| ||||| || || ||||||||||||||||||||||||||||||||| | || | |||||| || ||| ||||| | ||| |||||||| || |
|
|
| T |
15594688 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcact |
15594787 |
T |
|
| Q |
377 |
ttgggaatcctagtcgatccgccaacaagaacaacattatcgacactgttcttatccatcttagcatc |
444 |
Q |
| |
|
||||||||||||| || || ||||||| |||| || || ||||| |||||| |||||||||||| |
|
|
| T |
15594788 |
ttgggaatcctagaagacccaccaacaatgacaatatcatttacactactcttattcatcttagcatc |
15594855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 4679081 - 4679018
Alignment:
| Q |
267 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctctt |
330 |
Q |
| |
|
||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
4679081 |
cgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactctt |
4679018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 34467302 - 34467190
Alignment:
| Q |
277 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaacc |
376 |
Q |
| |
|
||||||||| || || ||| ||||||| ||||||||||||||||||||||| || || || ||||| ||| |||| || || |||| || || || || |
|
|
| T |
34467302 |
agcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcact |
34467203 |
T |
|
| Q |
377 |
ttgggaatcctag |
389 |
Q |
| |
|
||||||||||||| |
|
|
| T |
34467202 |
ttgggaatcctag |
34467190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 593 - 678
Target Start/End: Complemental strand, 34466991 - 34466906
Alignment:
| Q |
593 |
gtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaa |
678 |
Q |
| |
|
|||||||| || |||| || |||||||||||||| || | ||| || || |||||||||||||| || |||| |||||||||||| |
|
|
| T |
34466991 |
gtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaa |
34466906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 413
Target Start/End: Original strand, 28219591 - 28219708
Alignment:
| Q |
296 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccactgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
395 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| | ||||||||| | || || || |||| |||||||| || || ||||| |||| || | |
|
|
| T |
28219591 |
ccataagcaacagcctcatcagggttaatgctcttacacaattccttccctccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagc |
28219690 |
T |
|
| Q |
396 |
cgccaacaagaacaacat |
413 |
Q |
| |
|
| |||||||||||||||| |
|
|
| T |
28219691 |
ctccaacaagaacaacat |
28219708 |
T |
|
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