View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3226_high_43 (Length: 237)
Name: NF3226_high_43
Description: NF3226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3226_high_43 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 34953690 - 34953898
Alignment:
| Q |
18 |
tataccgccaccttctccactaaacggttcatctacaccaccttctccagtactagatggttcatctccaccaccttctccacttgatggttcaactctt |
117 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
34953690 |
tataccgccaccttctccactaaacggttcatctacaccaccttctccagtactagatggttcatctccaccaccttctccgcttgatggttcaactctt |
34953789 |
T |
|
| Q |
118 |
actccaccacctgttcagcaagtcggttcatctccaccaccactagggactgatgtgacaaatccaattactccaactcaatctcctgtttcagaacctc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34953790 |
actccaccacctgttcagcaagtcggttcatctccaccaccactagggactgatgtgacaaatccaattactccaactcaatctcctgtttcagaacctc |
34953889 |
T |
|
| Q |
218 |
ctcctccta |
226 |
Q |
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||||||||| |
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| T |
34953890 |
ctcctccta |
34953898 |
T |
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