View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3226_low_46 (Length: 236)

Name: NF3226_low_46
Description: NF3226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3226_low_46
NF3226_low_46
[»] chr7 (58 HSPs)
chr7 (7-157)||(45277863-45278026)
chr7 (1-158)||(21715071-21715241)
chr7 (7-167)||(21716515-21716688)
chr7 (1-164)||(31392051-31392227)
chr7 (1-166)||(8230061-8230239)
chr7 (7-160)||(40028454-40028620)
chr7 (7-160)||(31393555-31393721)
chr7 (1-88)||(32881198-32881285)
chr7 (7-85)||(45276494-45276572)
chr7 (7-156)||(8231530-8231692)
chr7 (1-158)||(40029919-40030089)
chr7 (1-88)||(4675687-4675774)
chr7 (17-87)||(32882621-32882691)
chr7 (30-85)||(46245207-46245262)
chr7 (30-84)||(14774598-14774652)
chr7 (30-84)||(15225051-15225105)
chr7 (30-84)||(15135464-15135518)
chr7 (30-84)||(11747478-11747532)
chr7 (98-158)||(37133649-37133709)
chr7 (98-158)||(46246575-46246635)
chr7 (98-165)||(12178475-12178542)
chr7 (100-158)||(706742-706800)
chr7 (99-161)||(32882716-32882777)
chr7 (98-159)||(45276408-45276468)
chr7 (98-158)||(12180639-12180699)
chr7 (98-158)||(13420286-13420346)
chr7 (98-158)||(21914638-21914698)
chr7 (30-85)||(30792749-30792804)
chr7 (41-84)||(31734685-31734728)
chr7 (98-157)||(46245122-46245181)
chr7 (100-158)||(708154-708212)
chr7 (30-84)||(15136859-15136912)
chr7 (98-164)||(37131828-37131894)
chr7 (98-159)||(3704396-3704457)
chr7 (105-158)||(15136946-15136999)
chr7 (98-159)||(25008090-25008151)
chr7 (100-165)||(41591507-41591572)
chr7 (98-142)||(4675796-4675840)
chr7 (98-154)||(11671286-11671342)
chr7 (98-158)||(28848557-28848617)
chr7 (100-160)||(32429872-32429932)
chr7 (33-85)||(37131920-37131972)
chr7 (33-85)||(46246497-46246549)
chr7 (116-159)||(30792854-30792897)
chr7 (115-158)||(43546747-43546790)
chr7 (31-81)||(9532534-9532584)
chr7 (31-85)||(12180559-12180613)
chr7 (103-168)||(9532625-9532690)
chr7 (100-157)||(11669841-11669898)
chr7 (46-87)||(11748887-11748928)
chr7 (48-85)||(21914414-21914451)
chr7 (98-159)||(25009485-25009546)
chr7 (29-77)||(11669934-11669982)
chr7 (30-77)||(14781924-14781972)
chr7 (30-77)||(15231957-15232005)
chr7 (128-164)||(23966308-23966344)
chr7 (110-158)||(31734766-31734814)
chr7 (98-158)||(38758317-38758377)
[»] chr4 (48 HSPs)
chr4 (7-158)||(19994497-19994661)
chr4 (7-159)||(44251603-44251768)
chr4 (9-158)||(44253090-44253252)
chr4 (1-85)||(18597717-18597801)
chr4 (7-158)||(19995950-19996114)
chr4 (7-158)||(55948849-55949013)
chr4 (8-158)||(55947359-55947522)
chr4 (8-85)||(53355185-53355262)
chr4 (98-165)||(48713462-48713529)
chr4 (98-163)||(42978919-42978984)
chr4 (99-159)||(18597855-18597915)
chr4 (98-159)||(42977196-42977257)
chr4 (98-157)||(32082633-32082692)
chr4 (99-158)||(54123546-54123605)
chr4 (98-164)||(10337097-10337163)
chr4 (98-159)||(18597630-18597691)
chr4 (30-85)||(10338087-10338142)
chr4 (100-159)||(38157018-38157077)
chr4 (98-165)||(42889810-42889877)
chr4 (30-85)||(42977283-42977338)
chr4 (98-160)||(10338170-10338232)
chr4 (98-155)||(48711860-48711917)
chr4 (101-154)||(54534981-54535034)
chr4 (98-165)||(21354776-21354844)
chr4 (98-154)||(22309138-22309194)
chr4 (7-87)||(39637352-39637432)
chr4 (98-149)||(9561854-9561905)
chr4 (30-85)||(16880408-16880463)
chr4 (98-157)||(24919052-24919111)
chr4 (30-85)||(32082552-32082607)
chr4 (30-85)||(42978838-42978893)
chr4 (30-85)||(54121912-54121967)
chr4 (30-85)||(54123464-54123519)
chr4 (98-156)||(33609344-33609402)
chr4 (100-165)||(4906121-4906186)
chr4 (98-159)||(54536697-54536758)
chr4 (99-155)||(53355100-53355156)
chr4 (98-153)||(7499360-7499415)
chr4 (30-85)||(16879243-16879298)
chr4 (98-165)||(33607460-33607527)
chr4 (30-85)||(48713381-48713436)
chr4 (98-160)||(39929354-39929416)
chr4 (30-84)||(48711944-48711998)
chr4 (98-157)||(54121825-54121886)
chr4 (100-157)||(4931998-4932055)
chr4 (102-159)||(4933335-4933392)
chr4 (102-159)||(29756270-29756327)
chr4 (98-158)||(22307670-22307730)
[»] chr8 (23 HSPs)
chr8 (1-157)||(25265795-25265964)
chr8 (7-158)||(25264339-25264503)
chr8 (7-88)||(33294022-33294103)
chr8 (17-158)||(33295352-33295505)
chr8 (98-158)||(3158037-3158097)
chr8 (98-160)||(39884613-39884675)
chr8 (99-160)||(22714050-22714111)
chr8 (98-158)||(39886076-39886136)
chr8 (100-159)||(36899896-36899955)
chr8 (100-158)||(17707450-17707508)
chr8 (98-159)||(33293937-33293998)
chr8 (14-77)||(45447099-45447162)
chr8 (106-156)||(15279641-15279691)
chr8 (106-156)||(15460010-15460060)
chr8 (100-158)||(17706164-17706222)
chr8 (100-158)||(357976-358034)
chr8 (98-160)||(1650210-1650272)
chr8 (102-156)||(2552408-2552462)
chr8 (100-158)||(36901179-36901237)
chr8 (102-158)||(26720252-26720308)
chr8 (99-155)||(31819051-31819107)
chr8 (105-157)||(31916971-31917023)
chr8 (105-157)||(45448499-45448551)
[»] chr1 (47 HSPs)
chr1 (1-165)||(16673146-16673323)
chr1 (1-157)||(33259262-33259431)
chr1 (1-157)||(33279421-33279590)
chr1 (7-160)||(33257878-33258043)
chr1 (7-160)||(33278050-33278215)
chr1 (1-158)||(36145343-36145513)
chr1 (7-158)||(7655160-7655324)
chr1 (7-165)||(28919075-28919246)
chr1 (1-166)||(7653677-7653855)
chr1 (8-158)||(28920552-28920715)
chr1 (17-88)||(16672737-16672808)
chr1 (1-88)||(19057757-19057844)
chr1 (18-85)||(36146819-36146886)
chr1 (16-81)||(1969636-1969701)
chr1 (98-156)||(16592022-16592080)
chr1 (99-157)||(41668273-41668331)
chr1 (98-157)||(24438948-24439007)
chr1 (106-158)||(19249319-19249371)
chr1 (98-168)||(44269074-44269144)
chr1 (98-172)||(50317050-50317124)
chr1 (98-154)||(13211112-13211168)
chr1 (98-158)||(31321008-31321068)
chr1 (98-165)||(24437066-24437133)
chr1 (98-149)||(36146912-36146962)
chr1 (14-77)||(46605825-46605888)
chr1 (99-157)||(46604439-46604497)
chr1 (100-158)||(50315317-50315375)
chr1 (8-77)||(33485222-33485291)
chr1 (32-85)||(41668358-41668411)
chr1 (98-158)||(7184322-7184382)
chr1 (30-78)||(22684069-22684117)
chr1 (100-160)||(31815772-31815832)
chr1 (110-154)||(44268891-44268935)
chr1 (98-158)||(46652781-46652841)
chr1 (98-157)||(7185856-7185915)
chr1 (100-159)||(8323441-8323500)
chr1 (110-161)||(10708026-10708077)
chr1 (100-159)||(28251929-28251988)
chr1 (100-159)||(32847812-32847871)
chr1 (30-85)||(50316969-50317024)
chr1 (105-155)||(33485329-33485379)
chr1 (98-155)||(19251162-19251219)
chr1 (100-156)||(9626469-9626525)
chr1 (98-146)||(19057867-19057915)
chr1 (98-158)||(22684150-22684210)
chr1 (17-77)||(24085604-24085664)
chr1 (110-158)||(33981503-33981551)
[»] chr3 (31 HSPs)
chr3 (7-159)||(33732963-33733128)
chr3 (8-159)||(53529431-53529595)
chr3 (7-160)||(53527967-53528133)
chr3 (7-85)||(33734398-33734476)
chr3 (30-85)||(31796753-31796808)
chr3 (30-85)||(40499171-40499226)
chr3 (30-85)||(41083189-41083244)
chr3 (30-85)||(48568449-48568504)
chr3 (99-163)||(31656947-31657011)
chr3 (98-166)||(41081793-41081861)
chr3 (98-160)||(33734502-33734564)
chr3 (98-167)||(40499252-40499321)
chr3 (30-85)||(31657039-31657094)
chr3 (98-159)||(48566994-48567055)
chr3 (98-158)||(41083271-41083331)
chr3 (99-154)||(22942339-22942394)
chr3 (98-157)||(31796834-31796893)
chr3 (100-158)||(32558918-32558976)
chr3 (98-159)||(30700294-30700355)
chr3 (115-159)||(8391399-8391443)
chr3 (33-85)||(31795458-31795510)
chr3 (33-85)||(41081887-41081939)
chr3 (33-85)||(48567081-48567133)
chr3 (100-163)||(3026883-3026946)
chr3 (98-157)||(31795373-31795432)
chr3 (100-163)||(32615648-32615711)
chr3 (99-157)||(48568531-48568589)
chr3 (100-157)||(31199249-31199306)
chr3 (100-157)||(32613883-32613941)
chr3 (98-154)||(41879927-41879983)
chr3 (115-159)||(45981405-45981449)
[»] chr2 (42 HSPs)
chr2 (1-159)||(13947746-13947916)
chr2 (1-159)||(14088935-14089105)
chr2 (1-159)||(1840155-1840326)
chr2 (7-157)||(1841651-1841814)
chr2 (30-88)||(40303375-40303433)
chr2 (30-85)||(45499390-45499445)
chr2 (98-159)||(28563374-28563435)
chr2 (7-85)||(13948491-13948573)
chr2 (7-85)||(14089698-14089780)
chr2 (98-167)||(45499295-45499364)
chr2 (98-158)||(44421342-44421402)
chr2 (98-158)||(45493032-45493092)
chr2 (98-158)||(45500774-45500834)
chr2 (33-88)||(28563458-28563513)
chr2 (98-157)||(40304762-40304821)
chr2 (99-162)||(44465091-44465154)
chr2 (101-167)||(18161046-18161112)
chr2 (100-165)||(18224847-18224912)
chr2 (99-167)||(16142216-16142284)
chr2 (98-158)||(40303292-40303352)
chr2 (98-164)||(38730062-38730129)
chr2 (98-156)||(22060480-22060538)
chr2 (100-165)||(10345149-10345214)
chr2 (115-167)||(18159885-18159937)
chr2 (107-167)||(18308182-18308242)
chr2 (100-160)||(22054331-22054391)
chr2 (99-159)||(35588125-35588185)
chr2 (33-85)||(40304684-40304736)
chr2 (99-159)||(44097354-44097414)
chr2 (33-85)||(45492954-45493006)
chr2 (33-85)||(45500696-45500748)
chr2 (98-157)||(20587039-20587098)
chr2 (100-159)||(43516396-43516455)
chr2 (115-157)||(20588476-20588518)
chr2 (98-160)||(38728182-38728243)
chr2 (98-159)||(6842713-6842774)
chr2 (98-155)||(7317392-7317449)
chr2 (98-158)||(6844097-6844157)
chr2 (98-158)||(16143596-16143656)
chr2 (98-158)||(28165657-28165717)
chr2 (98-158)||(34591724-34591784)
chr2 (98-158)||(44492311-44492371)
[»] chr5 (31 HSPs)
chr5 (1-157)||(1418826-1418995)
chr5 (7-157)||(30332283-30332446)
chr5 (8-155)||(25916175-25916335)
chr5 (7-83)||(25914577-25914653)
chr5 (7-160)||(30333904-30334069)
chr5 (7-85)||(1417496-1417574)
chr5 (30-88)||(38624798-38624856)
chr5 (33-84)||(17554925-17554976)
chr5 (98-159)||(16308563-16308624)
chr5 (34-85)||(11772623-11772674)
chr5 (99-157)||(8874275-8874333)
chr5 (98-155)||(8872522-8872579)
chr5 (98-155)||(36619546-36619603)
chr5 (98-158)||(39103411-39103471)
chr5 (98-158)||(27756785-27756845)
chr5 (107-163)||(39101709-39101765)
chr5 (98-159)||(38624714-38624775)
chr5 (30-82)||(39101803-39101855)
chr5 (33-88)||(36619627-36619682)
chr5 (30-81)||(36621145-36621196)
chr5 (105-158)||(36621233-36621286)
chr5 (98-159)||(38626170-38626231)
chr5 (30-87)||(39103330-39103387)
chr5 (30-86)||(8872604-8872659)
chr5 (33-84)||(17552056-17552108)
chr5 (33-85)||(38626092-38626144)
chr5 (116-167)||(16182608-16182659)
chr5 (99-157)||(17555004-17555063)
chr5 (98-156)||(18201345-18201403)
chr5 (33-85)||(8874196-8874248)
chr5 (33-85)||(11771283-11771335)
[»] chr6 (20 HSPs)
chr6 (1-87)||(19082749-19082835)
chr6 (7-82)||(19084016-19084091)
chr6 (98-164)||(1258440-1258506)
chr6 (98-160)||(1256711-1256773)
chr6 (98-164)||(8752800-8752866)
chr6 (98-157)||(8745432-8745491)
chr6 (98-159)||(7678647-7678708)
chr6 (98-156)||(2956235-2956293)
chr6 (98-156)||(19084120-19084178)
chr6 (30-85)||(2956154-2956209)
chr6 (30-85)||(8745517-8745572)
chr6 (33-88)||(1256796-1256851)
chr6 (30-88)||(1258358-1258417)
chr6 (99-158)||(10707675-10707734)
chr6 (100-167)||(11065656-11065723)
chr6 (99-157)||(1443417-1443475)
chr6 (8-77)||(7678540-7678609)
chr6 (31-84)||(8752720-8752773)
chr6 (105-158)||(19597984-19598037)
chr6 (130-158)||(19082696-19082724)
[»] scaffold0489 (3 HSPs)
scaffold0489 (7-88)||(5461-5544)
scaffold0489 (7-158)||(6711-6875)
scaffold0489 (101-166)||(5366-5433)
[»] scaffold0633 (2 HSPs)
scaffold0633 (99-157)||(6895-6953)
scaffold0633 (48-85)||(6831-6868)
[»] scaffold1176 (1 HSPs)
scaffold1176 (98-167)||(2041-2110)
[»] scaffold0280 (1 HSPs)
scaffold0280 (98-158)||(12130-12190)
[»] scaffold0369 (1 HSPs)
scaffold0369 (115-165)||(8287-8337)
[»] scaffold0129 (1 HSPs)
scaffold0129 (100-158)||(4259-4317)
[»] scaffold0524 (1 HSPs)
scaffold0524 (98-154)||(7701-7757)


Alignment Details
Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 45277863 - 45278026
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||       
T  45277863 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttaaaacaaa 45277962  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
        ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45277963 aaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 45278026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 21715241 - 21715071
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  21715241 taccacgtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatagggattgttttaa 21715142  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
     ||       |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  21715141 aacaaaaaaagatacagggacgaaaatcaaaaacacgccaaattacagggacgatttacatatttaagcct 21715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 21716515 - 21716688
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||             ||       
T  21716515 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacaaa 21716614  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
        ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  21716615 aaaagatacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaagcctaatttttat 21716688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31392227 - 31392051
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||                
T  31392227 taccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttggcgggagggacgaaaatcaaaaagttattaacttataggggttgttttag 31392128  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttt 164  Q
     ||       ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  31392127 aacaaaaaaagatacagggacgaaaaccaaaaacacgtcaaattacagggacgatttacatatttaagccttctttt 31392051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 8230239 - 8230061
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||                
T  8230239 taccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgagagggacgaaaataaaaaagttattaacttataggggttgttttag 8230140  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttta 166  Q
     ||       |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||    
T  8230139 aacaaaaaaagatacagggacgaaaaccaaaaacacaccaaattacagggacgatttacatatttaagcctttttttta 8230061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 40028620 - 40028454
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||             ||       
T  40028620 gtcatcttctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaacttataggggttgttttagaacaaa 40028521  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
        ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  40028520 aaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacctta 40028454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 31393555 - 31393721
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||             ||       
T  31393555 gtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttacaggggttgttttataacaaa 31393654  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
        |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31393655 aaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctta 31393721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32881285 - 32881198
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32881285 taccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttatag 32881198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 45276572 - 45276494
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45276572 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 45276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 8231530 - 8231692
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||             ||       
T  8231530 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagtgacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaa 8231629  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
        ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  8231630 aaaagatacagggacaaaaaccaaaaacaagccaaattacagggacgatttacatatttaagc 8231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 40029919 - 40030089
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||                
T  40029919 taccacgtcatccttcgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttactaacttatagaggttgttttag 40030018  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
     ||        ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  40030019 aacaaaaaaatatacagggatgaaaacaaaaaacacgccaaattacagggacgatttacatatttaagcct 40030089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4675687 - 4675774
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    ||||| |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4675687 taccacgtcatcctctgtttgccgcatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 4675774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 32882621 - 32882691
Alignment:
Q  17 gtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttata 87  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  32882621 gtttgccacatgtgcgtttttgtaacggaagttgacggaagggacgaaaatcaaaaagtcattaacttata 32882691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 46245262 - 46245207
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46245262 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 46245207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 14774652 - 14774598
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14774652 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 14774598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 15225105 - 15225051
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15225105 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 15225051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 15135518 - 15135464
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  15135518 gcgtttttgtaacaaaagttgacgggagggacgaaaatcaaaaagttattaactt 15135464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 11747532 - 11747478
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  11747532 gcgtttttgtaacggaagtagacgggagggacggaaatcaaaaaattattaactt 11747478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 37133649 - 37133709
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||| ||||||||||||||||||||  | |||| ||||||||||||||||||||||||    
T  37133649 gatacagtgacgaaaaccaaaaacacgcgaacttacggggacgatttacatatttaagcct 37133709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 46246575 - 46246635
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||||||||||||||  | ||||||||||  |||||||||||||||||    
T  46246575 gatacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcct 46246635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 12178542 - 12178475
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    ||||||||||||||||||||||||||||  | ||| ||||||  |||||||||||||||||| |||||    
T  12178542 gatacagggacgaaaaccaaaaacacgcgaacttagagggaccttttacatatttaagcctttttttt 12178475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 706800 - 706742
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||| ||||||||||||||||  ||||||||||||  |||||||||||||||||    
T  706800 tacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagcct 706742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 32882716 - 32882777
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttat 161  Q
    ||||| |||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  32882716 atacatggacaaaaaccaaaaacatgca-aattacagggacgatttacatatttaagccttat 32882777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 45276468 - 45276408
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||||| |||||||||||| |||| ||||||| ||||||| ||||||||||||||||    
T  45276468 gatacagggacaaaaaccaaaaactcgccaaattaca-ggacgatctacatatttaagcctt 45276408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 12180639 - 12180699
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||||||||||||||  | |||||||||| ||| |||||||| |||||    
T  12180639 gatacagggacgaaaaccaaaaacacgcgaacttacagggacaattaacatattttagcct 12180699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 13420286 - 13420346
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||| ||||||||||||||||  | |||||||| | ||||||||||||||||||    
T  13420286 gatacagggactaaaaccaaaaacacgcaaacttacaggggccatttacatatttaagcct 13420346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 21914638 - 21914698
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||| ||||||||||||||||||||| || ||||||||||||| ||| ||||| |||||||    
T  21914638 gatatagggacgaaaaccaaaaacacaccaaattacagggacggtttgcatatgtaagcct 21914698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 30792749 - 30792804
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||||||||||  |  ||||||||||||||||||| ||||||||||||||||||    
T  30792749 gcgtttttgtaacaaagtttgacgggagggacgaaaagcaaaaagttattaactta 30792804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 31734685 - 31734728
Alignment:
Q  41 acggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  31734685 acggaagttgacgggaggaacgaaaatcaaaaatttattaactt 31734728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 46245181 - 46245122
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||| ||||||||||||||||||||||  | ||||||||||  ||||||||||||||||    
T  46245181 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcc 46245122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 708154 - 708212
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||| |||| ||||||||||||||||  ||||||||||||  |||||||||||||||||    
T  708154 tacatggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagcct 708212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 15136859 - 15136912
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    |||||||| |||| |||||||||||| |||| |||||||||||||||||||||||    
T  15136859 gcgtttttttaacagaagttgacggg-gggatgaaaatcaaaaagttattaactt 15136912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 37131894 - 37131828
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttt 164  Q
    |||||||| |||||||||||| ||||||  | ||||  ||||||||||||||||||||| |||||||    
T  37131894 gatacaggaacgaaaaccaaacacacgcgaacttacgtggacgatttacatatttaagctttatttt 37131828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 3704457 - 3704396
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||| |||||||||||||||||||| ||  | ||||| ||||||||||| ||||||||||||    
T  3704457 gataaagggacgaaaaccaaaaacaagcgaacttacatggacgatttacctatttaagcctt 3704396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 15136946 - 15136999
Alignment:
Q  105 ggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||| |||||||||||  | |||||||||||||||| ||||||||||||    
T  15136946 ggacgaaaatcaaaaacacgcgaatttacagggacgatttatatatttaagcct 15136999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 25008151 - 25008090
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||||    |||||||||||  ||||||||||||| ||||||||||||||||||    
T  25008151 gatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagcctt 25008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 41591572 - 41591507
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    ||||||||||||||| |||||  |||  ||||||||||||  ||||||||||||||||||| ||||    
T  41591572 tacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaagccttaatttt 41591507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 4675796 - 4675840
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgat 142  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||    
T  4675796 gatacatggacgaaaatcaaaaacacgccaaattacagggacgat 4675840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 11671286 - 11671342
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaa 154  Q
    |||||| |||||||||| ||||||||||  | |||| ||||||||||||||||||||    
T  11671286 gatacatggacgaaaacaaaaaacacgcgaacttacggggacgatttacatatttaa 11671342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 28848617 - 28848557
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||    |||||||||||  ||||||||||||| |||||||||||||||||    
T  28848617 gatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagcct 28848557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 32429872 - 32429932
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    ||||||||| |||||||||||| |||| | ||||||||||  ||||| |||||||||||||    
T  32429872 tacagggactaaaaccaaaaacgcgccaacttacagggactttttacttatttaagcctta 32429932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 37131972 - 37131920
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  |||||||    
T  37131972 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataactta 37131920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 46246497 - 46246549
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  46246497 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaactta 46246549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 30792854 - 30792897
Alignment:
Q  116 aaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||||| |||||||| | |||||||||||||||||||||    
T  30792854 aaaaacacgccaaattacagagtcgatttacatatttaagcctt 30792897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 43546747 - 43546790
Alignment:
Q  115 caaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||  ||||||||||||| |||||||||||||||||    
T  43546747 caaaaacacgcgaaattacagggacgttttacatatttaagcct 43546790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 9532534 - 9532584
Alignment:
Q  31 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaa 81  Q
    |||||||||||| ||  |||| |||||||||||||| ||||||||||||||    
T  9532534 cgtttttgtaacagagtttgatgggagggacgaaaagcaaaaagttattaa 9532584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 12180559 - 12180613
Alignment:
Q  31 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||||||||| || | |||||||||||||||||||||||| |||  |||||||    
T  12180559 cgtttttgtaacagatgctgacgggagggacgaaaatcaaaacgtttgtaactta 12180613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 9532625 - 9532690
Alignment:
Q  103 agggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttatg 168  Q
    |||| |||||| |||||| ||| | ||||||| |||||| |||||||||||||||| | |||||||    
T  9532625 agggccgaaaatcaaaaatacgtcaaattacaaggacgacttacatatttaagcctaaattttatg 9532690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 11669898 - 11669841
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||| |||||||||||||||||| ||  | ||||||||||  ||||||||||||||||    
T  11669898 tacatggacgaaaaccaaaaacatgcgaacttacagggaccgtttacatatttaagcc 11669841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 11748887 - 11748928
Alignment:
Q  46 agttgacgggagggacgaaaatcaaaaagttattaacttata 87  Q
    ||||||||| |||||||||| |||||||||||| ||||||||    
T  11748887 agttgacggtagggacgaaattcaaaaagttatcaacttata 11748928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 21914451 - 21914414
Alignment:
Q  48 ttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  21914451 ttgacgggaggaacgaaaaacaaaaagttattaactta 21914414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 25009485 - 25009546
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||||    |||||||||||  ||||||||||||| |||||||||| |||||||    
T  25009485 gatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatattaaagcctt 25009546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 11669982 - 11669934
Alignment:
Q  29 tgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 77  Q
    ||||||||||||||||||||| |||  |||||| |||||||||| ||||    
T  11669982 tgcgtttttgtaacggaagttaacgttagggactaaaatcaaaaggtta 11669934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 14781924 - 14781972
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaa-atcaaaaagtta 77  Q
    |||||||| |||| |||||||||| ||||||||||| ||||||||||||    
T  14781924 gcgtttttttaacagaagttgacgagagggacgaaatatcaaaaagtta 14781972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 15231957 - 15232005
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaa-atcaaaaagtta 77  Q
    |||||||| |||| |||||||||| ||||||||||| ||||||||||||    
T  15231957 gcgtttttttaacagaagttgacgagagggacgaaatatcaaaaagtta 15232005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 23966344 - 23966308
Alignment:
Q  128 aattacagggacgatttacatatttaagccttatttt 164  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  23966344 aattacagggacggtttgcatatttaagccttatttt 23966308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 31734766 - 31734814
Alignment:
Q  110 aaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||  | ||||| ||||||||||||| |||||||||    
T  31734766 aaaaccaaaaacacgcgaacttacaaggacgatttacatgtttaagcct 31734814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 38758317 - 38758377
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||| |||||||||||| |||  | ||||||||||  ||||| |||||||||||    
T  38758317 gatacagggactaaaaccaaaaacgcgctaacttacagggaccttttacttatttaagcct 38758377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 8e-45; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 19994661 - 19994497
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||       
T  19994661 gtcatggtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaa 19994562  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
        ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19994561 aaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 19994497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 44251768 - 44251603
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta------------tag-acnnn 93  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||| ||       
T  44251768 gtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaagggttgttttagaacaaa 44251669  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
        |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44251668 aaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctt 44251603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 44253090 - 44253252
Alignment:
Q  9 catcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnnnn 95  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||             ||         
T  44253090 catcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagagacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaa 44253189  T
Q  96 nngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
      |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  44253190 aagatatagggacgaaaaccaaaaacacgccaaattaaagggacgatttacatatttaagcct 44253252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18597801 - 18597717
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18597801 taccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 18597717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 19995950 - 19996114
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||             ||       
T  19995950 gtcatcatccatttgccacatgtgcgtttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaa 19996049  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
        ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19996050 aaaagatacagggaccaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 19996114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 55948849 - 55949013
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||             ||       
T  55948849 gtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggaagaaaatccaaaagttattaacttacaggggttgttttagaacaaa 55948948  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
        ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  55948949 aaaagatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagcct 55949013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 55947522 - 55947359
Alignment:
Q  8 tcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnnn 94  Q
    ||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||             ||        
T  55947522 tcatcctccatttgccacatgtgcatttttataacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggctgttttataacaaaa 55947423  T
Q  95 nnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
       ||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  55947422 aaagatacagggacgaaaaccaaaaatacgtcaaattacagggacgatttacatatttaagcct 55947359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 53355262 - 53355185
Alignment:
Q  8 tcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53355262 tcatcctccgtttgccacatgtgcgtttttgtaacggcagttgacgggagggacgaaaatcaaaaagttattaactta 53355185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 48713462 - 48713529
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  48713462 gatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccttaatttt 48713529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 42978919 - 42978984
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattt 163  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42978919 gatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagccttattt 42978984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 18597855 - 18597915
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18597855 atacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctt 18597915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 42977257 - 42977196
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  42977257 gatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagcctt 42977196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 32082633 - 32082692
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  32082633 gatacagggacgaaaaccaaaaacacgccaaattacacggacgatttacatatttaagcc 32082692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 54123546 - 54123605
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  54123546 atacagggacgaaaaccaaaaacatgccaaattacagggacgatttacatatttaagcct 54123605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 10337163 - 10337097
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttt 164  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  10337163 gatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagtctaatttt 10337097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 18597691 - 18597630
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||||||    
T  18597691 gatacagggacgaaaaccaaaaacacggcaaattacatggacgatttaaatatttaagcctt 18597630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 10338087 - 10338142
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||    
T  10338087 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaactta 10338142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 38157077 - 38157018
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||||||||||||||||||||  | ||||||||| ||||||||||||||| ||||    
T  38157077 tacagggacgaaaaccaaaaacacgcgaacttacagggatgatttacatatttaaacctt 38157018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 42889810 - 42889877
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    |||||| |||||||||| |||||||||   | |||||||||||||||||||||||||||||| |||||    
T  42889810 gatacaaggacgaaaacaaaaaacacgtgaacttacagggacgatttacatatttaagcctttttttt 42889877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 42977338 - 42977283
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||    
T  42977338 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaactta 42977283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 10338170 - 10338232
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    ||||||| ||| ||||||||||||||||  ||||||| ||||||||||||||||||| |||||    
T  10338170 gatacagagacaaaaaccaaaaacacgcaaaattacatggacgatttacatatttaaacctta 10338232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 48711917 - 48711860
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
    |||||| |||||||||| ||||||||||  ||||||| ||||||||||||||||||||    
T  48711917 gatacaaggacgaaaacaaaaaacacgcaaaattacaaggacgatttacatatttaag 48711860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 54535034 - 54534981
Alignment:
Q  101 acagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaa 154  Q
    |||||||||||||||||||||||||  | ||||| |||||||||||||||||||    
T  54535034 acagggacgaaaaccaaaaacacgcgaacttacatggacgatttacatatttaa 54534981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 21354776 - 21354844
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaa-ttacagggacgatttacatatttaagccttattttt 165  Q
    |||||||||||||||| |||||||||||  || |||||||||   ||||||||||||||||||||||||    
T  21354776 gatacagggacgaaaatcaaaaacacgcgaaacttacagggatcttttacatatttaagccttattttt 21354844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 22309138 - 22309194
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaa 154  Q
    ||||||||||| ||||||||||||||||  | |||||||||| ||||||||||||||    
T  22309138 gatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 22309194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 39637432 - 39637352
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttata 87  Q
    |||||| || |||| |||||||||||||||| |||| |||| | || ||||||||||||||||||| ||||  ||||||||    
T  39637432 gtcatcctcagtttaccacatgtgcgtttttataacagaagctaacaggagggacgaaaatcaaaaggttaacaacttata 39637352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 9561905 - 9561854
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacata 149  Q
    ||||||| ||||||||||||||||||||  | ||||||||||||||||||||    
T  9561905 gatacagagacgaaaaccaaaaacacgcgaacttacagggacgatttacata 9561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 16880408 - 16880463
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  |||||||||||||||| || ||||||||||||||||||    
T  16880408 gcgtttttgtaacagagtttgacgggagggacgataagcaaaaagttattaactta 16880463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 24919111 - 24919052
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||||| ||||| |||||||||||||  | ||||||| ||||||||||||||||||||    
T  24919111 gatacaggaacgaagaccaaaaacacgcaaacttacaggtacgatttacatatttaagcc 24919052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 32082552 - 32082607
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||| ||||||||||||| ||||||||||||||||||    
T  32082552 gcgtttttgtaacagagtttgacaggagggacgaaaagcaaaaagttattaactta 32082607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 42978838 - 42978893
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||||||||||||||||| |||||| |||||||||||    
T  42978838 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaaattattaactta 42978893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 54121967 - 54121912
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  || |||||||||||||||| ||||||||||||||||||    
T  54121967 gcgtttttgtaacagagtttaacgggagggacgaaaagcaaaaagttattaactta 54121912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 54123464 - 54123519
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||||||| || ||  ||||||||||||||||||| ||||||||||||||||||    
T  54123464 gcgtttttgttacagagtttgacgggagggacgaaaagcaaaaagttattaactta 54123519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 33609344 - 33609402
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    |||||| |||||||||||||||||||||  | ||||||||||  |||||||||||||||    
T  33609344 gatacaaggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagc 33609402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 4906186 - 4906121
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    |||||||||||||||||||||  |||  | ||||||||||  |||||||||||||||||| |||||    
T  4906186 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcctttttttt 4906121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 54536697 - 54536758
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||| |||| |||||||| |||||||  | ||||||||||||||||||||||||| ||||    
T  54536697 gatacatggacaaaaaccaagaacacgcgaatttacagggacgatttacatatttaaacctt 54536758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 53355156 - 53355100
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
    |||||| ||| ||||| |||||||| || |||||||||||| |||||||||||||||    
T  53355156 atacagagacaaaaacaaaaaacacaccaaattacagggacaatttacatatttaag 53355100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 7499415 - 7499360
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatattta 153  Q
    |||||||||||||||| |||||||||| | || |||| ||||| ||||||||||||    
T  7499415 gatacagggacgaaaagcaaaaacacgtcaaactacaaggacgctttacatattta 7499360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 16879298 - 16879243
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||| ||||||| ||||    
T  16879298 gcgtttttgtaacagattttgacgggagggacgaaaagcaaaaggttattacctta 16879243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 33607527 - 33607460
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    |||||| |||||||||||||||||||||  | |||||| |||  ||||||||||||| |||| |||||    
T  33607527 gatacaaggacgaaaaccaaaaacacgcgaacttacagagaccttttacatatttaaacctttttttt 33607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 48713381 - 48713436
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||| ||||||||||||| ||||| ||||||||||||    
T  48713381 gcgtttttgtaacagagtttgactggagggacgaaaagcaaaaggttattaactta 48713436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 39929354 - 39929416
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    |||||||||||||    |||||||||||  ||||||| ||||| |||||||||||||||||||    
T  39929354 gatacagggacgatttgcaaaaacacgcgaaattacatggacgttttacatatttaagcctta 39929416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 48711998 - 48711944
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||| ||||| |||||    
T  48711998 gcgtttttgtaaccgagtttgacgggaaggacgaaaatcaaaatgttatcaactt 48711944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 54121886 - 54121825
Alignment:
Q  98 gatacagggacgaaaaccaaaaacac--gccgaattacagggacgatttacatatttaagcc 157  Q
    ||||||||||||||||| ||||| |   | | ||||||||||||||||||||||||||||||    
T  54121886 gatacagggacgaaaacaaaaaaaaaatgtcaaattacagggacgatttacatatttaagcc 54121825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 4932055 - 4931998
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||||||||||||||||||  |||  | ||||||||||  ||||||||||||||||    
T  4932055 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcc 4931998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 4933335 - 4933392
Alignment:
Q  102 cagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||||||||||  |||  | ||||||||||  ||||||||||||||||||    
T  4933335 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcctt 4933392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 29756327 - 29756270
Alignment:
Q  102 cagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||||||||||  |||  | ||||||||||  ||||||||||||||||||    
T  29756327 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcctt 29756270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 22307730 - 22307670
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||| ||||||||||||| ||  | ||||||||||  ||| |||||||||||||    
T  22307730 gatacagggactaaaaccaaaaacatgcgaacttacagggaccttttgcatatttaagcct 22307670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 5e-43; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 25265795 - 25265964
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  25265795 taccacgtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatagggattgttttaa 25265894  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
     ||       ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  25265895 aacaaaaaaagatacagggacgaaaacaaaaaacacgccaaattacagagacgatttacatatttaagcc 25265964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 25264503 - 25264339
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||             ||       
T  25264503 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaatttacagggattgttttaaaacaaa 25264404  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
        |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25264403 aaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 25264339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 33294103 - 33294022
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33294103 gtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaatttatag 33294022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 33295352 - 33295505
Alignment:
Q  17 gtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta------------tagacnnnnnnngatacag 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||            ||||        |||||||    
T  33295352 gtttgccacatgtgcgtttttgtaacggaagttgacgggagggacggaaatcaaaaagttattaacttacaagggttgttttagaacaaaaaagatacag 33295451  T
Q  105 ggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  33295452 ggacaaaaacaaaaaacacgccaaattacagagacgatttacatatttaagcct 33295505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 3158037 - 3158097
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  3158037 gatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcct 3158097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 39884675 - 39884613
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    ||||||||||| ||||||||||||||||  | |||||||||| ||||||||||||||||||||    
T  39884675 gatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaagcctta 39884613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 22714050 - 22714111
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    ||||||||||||||||||||||||| |  | |||||||| ||||||||||||||||||||||    
T  22714050 atacagggacgaaaaccaaaaacacacgaacttacaggggcgatttacatatttaagcctta 22714111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 39886076 - 39886136
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||| ||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  39886076 gatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaagcct 39886136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 36899955 - 36899896
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||| ||||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  36899955 tacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagcctt 36899896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 17707450 - 17707508
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||||||||||||||||||    
T  17707450 tacagggactaaaaccaaaaacacgctaaattacatggaccatttacatatttaagcct 17707508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 33293998 - 33293937
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||| ||||||||||||||||| || | ||||||| |||||||||| |||||||||||||    
T  33293998 gatacaaggacgaaaaccaaaaacgcgtcaaattacaaggacgatttatatatttaagcctt 33293937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 45447162 - 45447099
Alignment:
Q  14 tccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 77  Q
    |||||| ||||||||||||||||| ||||||| | |||||| |||||||||  |||||||||||    
T  45447162 tccgttagccacatgtgcgtttttttaacggatggtgacggcagggacgaatttcaaaaagtta 45447099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 15279641 - 15279691
Alignment:
Q  106 gacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||||||||    
T  15279641 gacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaagc 15279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 15460010 - 15460060
Alignment:
Q  106 gacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||||||||    
T  15460010 gacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaagc 15460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 17706222 - 17706164
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||| |||| ||||||||||||||||  ||||||||||||  |||||||||||||||||    
T  17706222 tacaaggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagcct 17706164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 358034 - 357976
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||||||||||  |||  | ||||||||||  |||||||||||||||||    
T  358034 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 357976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 1650210 - 1650272
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    |||||| | |||||||| ||||||||||  | ||||| ||||| |||||||||||||||||||    
T  1650210 gatacatgaacgaaaactaaaaacacgcgaacttacaaggacggtttacatatttaagcctta 1650272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 2552462 - 2552408
Alignment:
Q  102 cagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    ||||||||| || |||||||||||  | |||||| ||||||||||||||||||||    
T  2552462 cagggacgataatcaaaaacacgcaaacttacagagacgatttacatatttaagc 2552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 36901179 - 36901237
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||| ||| |||| |||||||||||  ||||||||||||  |||||||||||||||||    
T  36901179 tacagagactaaaaacaaaaacacgctaaattacagggaccttttacatatttaagcct 36901237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 26720252 - 26720308
Alignment:
Q  102 cagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||||||||||  | |||  ||||  ||||||||||||||||||    
T  26720252 cagggacgaaaaccaaaaacacgcgaacttatggggattatttacatatttaagcct 26720308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 31819107 - 31819051
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
    |||||| |||||||||||||||||| |  ||||| ||||||||||||  ||||||||    
T  31819107 atacagtgacgaaaaccaaaaacacacaaaattatagggacgatttatttatttaag 31819051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 31917023 - 31916971
Alignment:
Q  105 ggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||||||  |||||||| || ||||||| ||||||| ||||||||||||||    
T  31917023 ggacgaaaataaaaaacacaccaaattacatggacgatatacatatttaagcc 31916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 45448499 - 45448551
Alignment:
Q  105 ggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||||||||||||||||||  | ||| ||||||  ||||||||||||||||    
T  45448499 ggacgaaaaccaaaaacacgcgaacttagagggaccttttacatatttaagcc 45448551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 16673146 - 16673323
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  16673146 taccacgtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttag 16673245  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
     ||       ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||    
T  16673246 aacaaaaaaagatacagggacgaaaaccaaaaacacgcaaaattacagggacgatttacatatttaagcctttttttt 16673323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 33259262 - 33259431
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||                
T  33259262 taccacgtcatcgtccgtttgccacatgtgcatttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttaa 33259361  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
     ||       ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  33259362 aacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagcc 33259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 33279421 - 33279590
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||                
T  33279421 taccacgtcatcgtccgtttgccacatgtgcatttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttaa 33279520  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
     ||       ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  33279521 aacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagcc 33279590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 33258043 - 33257878
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------acnnnn 94  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            ||        
T  33258043 gtcatcctccgtttgccacatttgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggttgttttagaacaaaa 33257944  T
Q  95 nnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
       |||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33257943 aaagatacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctta 33257878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 33278215 - 33278050
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------acnnnn 94  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            ||        
T  33278215 gtcatcctccgtttgccacatttgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggttgttttagaacaaaa 33278116  T
Q  95 nnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
       |||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33278115 aaagatacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctta 33278050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 36145513 - 36145343
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||                
T  36145513 taccacgtcatcctccgtttgccacatgtgcatttttgtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttag 36145414  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
     ||       ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  36145413 aacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagcct 36145343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 7655160 - 7655324
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||             ||       
T  7655160 gtcatcctctgtttgccacatgtgcgtttttgtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaa 7655259  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
        ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  7655260 aaaagatacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaagcct 7655324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 28919246 - 28919075
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||             ||       
T  28919246 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacggaagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaa 28919147  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
        |||||||||| ||||| |||||||||||| |||||||||||| ||||| ||||||||||||| |||||    
T  28919146 aaaagatacagggatgaaaatcaaaaacacgccaaattacagggacaatttatatatttaagcctttttttt 28919075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 7653855 - 7653677
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||                
T  7653855 taccacgtcatcctccgtttgccacatgtgcatttttgtaatggaagttgacgggagggacaaaaatcaaaaagttattaacttataggggctgttttag 7653756  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttta 166  Q
     ||       ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||  |||||||    
T  7653755 aacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagccaaattttta 7653677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 28920552 - 28920715
Alignment:
Q  8 tcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnnn 94  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||             ||        
T  28920552 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaggttattaacttacaggggttgttttagaacaaaa 28920651  T
Q  95 nnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
       ||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  28920652 aaagatacagggacaaaaacaaaaaacacgccaaattacagggacgacttacatatttaagcct 28920715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 16672808 - 16672737
Alignment:
Q  17 gtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16672808 gtttgccacatgtgcgtttttgtaacggaagttgacgggagggacggaaatcaaaaagttattaacttatag 16672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19057757 - 19057844
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  19057757 taccacgtcatcctccgtttgccacatgtgcgtttttgtaacagaagttgacggaagggacgaaaataaaaaagttattaacttatag 19057844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 36146819 - 36146886
Alignment:
Q  18 tttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36146819 tttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 36146886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 1969701 - 1969636
Alignment:
Q  16 cgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1969701 cgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaa 1969636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 16592080 - 16592022
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  16592080 gatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagc 16592022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 41668331 - 41668273
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  41668331 atacagagacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaagcc 41668273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 24438948 - 24439007
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||| ||||    
T  24438948 gatacagggacgaaaaccaaaaacacgcgaatttacagggacgatttacatattttagcc 24439007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 19249371 - 19249319
Alignment:
Q  106 gacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  19249371 gacgaaaaccaaaaacaatccaaattacagggacgatttacatatttaagcct 19249319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 44269074 - 44269144
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttatg 168  Q
    |||| ||||| ||||| |||||||||||  | |||||| ||||||||||||||||||||| ||||||||||    
T  44269074 gatatagggatgaaaatcaaaaacacgcgaatttacagagacgatttacatatttaagccatatttttatg 44269144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 50317050 - 50317124
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttatggtaa 172  Q
    |||||||||||||||| |||||||||||  | ||||| ||||||||||||||||||| |||| || |||| ||||    
T  50317050 gatacagggacgaaaatcaaaaacacgcgaacttacatggacgatttacatatttaaacctttttattattgtaa 50317124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 13211112 - 13211168
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaa 154  Q
    |||||||||||||||||||||||||| |  | ||||||||| |||||||||||||||    
T  13211112 gatacagggacgaaaaccaaaaacacacaaacttacagggaagatttacatatttaa 13211168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 31321068 - 31321008
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||||||||||||||  | ||||||||| ||||||  |||||||||||    
T  31321068 gatacagggacgaaaaccaaaaacacgcgaacttacagggatgatttaactatttaagcct 31321008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 24437133 - 24437066
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    ||||||| ||||||||| ||||||||||  | ||||||||||  |||||||||||||||||| |||||    
T  24437133 gatacagtgacgaaaacaaaaaacacgcgaacttacagggaccttttacatatttaagcctttttttt 24437066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 36146912 - 36146962
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacata 149  Q
    |||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  36146912 gatacagg-acgaaaaccaaaaacacgtcaaattacagggacgatttacata 36146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 46605825 - 46605888
Alignment:
Q  14 tccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 77  Q
    |||||| ||||||||||||||||| ||||||| | |||||| |||||||||  |||||||||||    
T  46605825 tccgttagccacatgtgcgtttttttaacggatggtgacggcagggacgaatttcaaaaagtta 46605888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 46604497 - 46604439
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||| |||||||||||||||||||||  | ||||||||||  ||||||||||||||||    
T  46604497 atacaaggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagcc 46604439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 50315375 - 50315317
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||| ||||||||||||||||||||  | ||||||||||  |||||||||||||||||    
T  50315375 tacagagacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcct 50315317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 33485222 - 33485291
Alignment:
Q  8 tcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 77  Q
    ||||| |||||| ||||||||| ||||||||||||  ||| | |||||||||||||||| ||||| ||||    
T  33485222 tcatcctccgttagccacatgtacgtttttgtaacacaagctaacgggagggacgaaaagcaaaacgtta 33485291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 41668411 - 41668358
Alignment:
Q  32 gtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||| ||  |||||||||| |||||||| ||||||||||||||||||    
T  41668411 gtttttgtaacagagtttgacgggagagacgaaaagcaaaaagttattaactta 41668358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 7184382 - 7184322
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||| ||||||||||||||||||||  | ||||| | || ||||||||||||||||||    
T  7184382 gatacagagacgaaaaccaaaaacacgcgaacttacaagaacaatttacatatttaagcct 7184322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 22684069 - 22684117
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttat 78  Q
    |||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  22684069 gcgtttttttaacagaagttgacggtagggacgaaattcaaaaagttat 22684117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 31815772 - 31815832
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    |||||||||||||||||||||  |||  | ||||||||||  |||||||||||||||||||    
T  31815772 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcctta 31815832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 44268935 - 44268891
Alignment:
Q  110 aaaaccaaaaacacgccgaattacagggacgatttacatatttaa 154  Q
    ||||||||||||||||  | |||||||||||||||||||||||||    
T  44268935 aaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 44268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 46652781 - 46652841
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||    |||||||||||  ||||||||||||| |||||||||||||||||    
T  46652781 gatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagcct 46652841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 7185856 - 7185915
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||||||||||||||| ||||||| ||  | ||||| ||||||||| ||||||||||||    
T  7185856 gatacagggacgaaaacaaaaaacatgcaaacttacaaggacgatttgcatatttaagcc 7185915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 8323441 - 8323500
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||||||||||||  |||  | ||||||||||  ||||||||||||||||||    
T  8323441 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcctt 8323500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 10708077 - 10708026
Alignment:
Q  110 aaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttat 161  Q
    ||||||||||||||||  | ||||||||||  ||||||||||||||||||||    
T  10708077 aaaaccaaaaacacgcgaacttacagggactttttacatatttaagccttat 10708026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 28251988 - 28251929
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||||||||||||  |||  ||||||||||||  ||| ||||||||||||||    
T  28251988 tacagggacgaaaaccaaaaatgcgctaaattacagggaccttttgcatatttaagcctt 28251929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 32847871 - 32847812
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||| |||||||||||| |||| | ||||||||||  ||||| ||||||||||||    
T  32847871 tacagggactaaaaccaaaaacgcgccaacttacagggaccttttacttatttaagcctt 32847812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 50316969 - 50317024
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| || | |||||||||||||||||||||||| |||  |||||||    
T  50316969 gcgtttttgtaacagatgctgacgggagggacgaaaatcaaaacgtttgtaactta 50317024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 33485329 - 33485379
Alignment:
Q  105 ggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
    ||||||||| ||||||||| |  ||||||||| ||||||||||||||||||    
T  33485329 ggacgaaaaacaaaaacacactaaattacaggaacgatttacatatttaag 33485379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 19251162 - 19251219
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
    |||| |||||| || || ||||||||||  || |||||||||||||||||||||||||    
T  19251162 gatatagggacaaacacaaaaaacacgcaaaaatacagggacgatttacatatttaag 19251219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 9626525 - 9626469
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    ||||||||||||||| ||||| ||||  | ||||||||||  |||||||||||||||    
T  9626525 tacagggacgaaaacaaaaaatacgcgaacttacagggaccttttacatatttaagc 9626469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 19057867 - 19057915
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttac 146  Q
    |||||| | |||||||| ||||||||||| |||||||| ||||||||||    
T  19057867 gatacatgaacgaaaactaaaaacacgccaaattacagagacgatttac 19057915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 22684150 - 22684210
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||| |||||||||||||||||||||  | ||||| ||||  |||||||||| ||||||    
T  22684150 gatacatggacgaaaaccaaaaacacgcgaacttacaaggaccttttacatattaaagcct 22684210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 24085664 - 24085604
Alignment:
Q  17 gtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 77  Q
    |||||||||||||| ||||||||||| |||| | ||  |||||| ||||||||||| ||||    
T  24085664 gtttgccacatgtgtgtttttgtaacagaagctaacaagagggatgaaaatcaaaaggtta 24085604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 33981551 - 33981503
Alignment:
Q  110 aaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||| |  | ||| |||||||||||||||||||||||||    
T  33981551 aaaaccaaaaacacacgaacttatagggacgatttacatatttaagcct 33981503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 33733128 - 33732963
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||             ||       
T  33733128 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggaaggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaa 33733029  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
         ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33733028 aaaaaatacaggaacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctt 33732963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 53529431 - 53529595
Alignment:
Q  8 tcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnnn 94  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||        
T  53529431 tcatcctccgtttgccacatgtgcatttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggctattttagaacaaaa 53529530  T
Q  95 nnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
       ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  53529531 aaagatacagggacgaaaactaaaaatacgccaaattacagggacgatttacatatttaagcctt 53529595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 53528133 - 53527967
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||             ||       
T  53528133 gtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggagttgttttagaacaaa 53528034  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
        ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  53528033 aaaagatacagggacgaaaaccaaaaacacgccaaattaaagggacgatttacacatttaagcctta 53527967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 33734398 - 33734476
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33734398 gtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaactta 33734476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 31796753 - 31796808
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31796753 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 31796808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 40499171 - 40499226
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40499171 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 40499226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 41083189 - 41083244
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41083189 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 41083244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 48568449 - 48568504
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48568449 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 48568504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 31657011 - 31656947
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattt 163  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  31657011 atacaaggacgaaaaccaaaaacatgccaaattacagggacgatttacatatttaatccttattt 31656947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 41081861 - 41081793
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttta 166  Q
    ||||||||||||||||||||||||||||  | ||||||||||  |||||||||||||||||| ||||||    
T  41081861 gatacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagccttgttttta 41081793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 33734502 - 33734564
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    |||||||| || ||||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  33734502 gatacaggaaccaaaaccaaaaacacgctaaattacagggacgatttacatatttaaacctta 33734564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 40499252 - 40499321
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    ||||| ||||||||||||||||||||||  | ||||||||||  |||||||||||||||||||| |||||    
T  40499252 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagccttatatttat 40499321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 31657094 - 31657039
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||    
T  31657094 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaactta 31657039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 48567055 - 48566994
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||| ||||||||||||||||||||  | ||||||||||  ||||||||||||||||||    
T  48567055 gatacagtgacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagcctt 48566994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 41083271 - 41083331
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||| ||||||||||||||||||||||  | ||||||||||  |||||||||||||||||    
T  41083271 gatacggggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagcct 41083331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 22942394 - 22942339
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaa 154  Q
    ||||||||| |||||||||||||| ||  | |||||||||||||||||||||||||    
T  22942394 atacagggatgaaaaccaaaaacaagcgaacttacagggacgatttacatatttaa 22942339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 31796834 - 31796893
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||| ||||||||||||||||||||||  | ||||||||||  ||||||||||||||||    
T  31796834 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcc 31796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 32558976 - 32558918
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||| ||||||||||  | ||||||||||  |||||||||||||||||    
T  32558976 tacagggacgaaaacaaaaaacacgcgaacttacagggaccttttacatatttaagcct 32558918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 30700355 - 30700294
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||| |||||||||||||||||||||  | ||| || |||||||||||||||||| ||||    
T  30700355 gatacaaggacgaaaaccaaaaacacgcgaacttaaagagacgatttacatatttaaacctt 30700294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 8391443 - 8391399
Alignment:
Q  115 caaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||    
T  8391443 caaaaacacgcgaaattacagggacgttttacatatttaagcctt 8391399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 31795510 - 31795458
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  31795510 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaactta 31795458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 41081939 - 41081887
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  41081939 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaactta 41081887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 48567133 - 48567081
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  48567133 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaactta 48567081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 3026883 - 3026946
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattt 163  Q
    ||||||||| ||||||||||||  ||| | ||||||||||  ||||| ||||||||||||||||    
T  3026883 tacagggactaaaaccaaaaacgtgccaacttacagggaccttttacttatttaagccttattt 3026946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 31795432 - 31795373
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||||||| ||||||||||||||||||  | ||||||||||  ||||| ||||||||||    
T  31795432 gatacagggccgaaaaccaaaaacacgcgaacttacagggaccttttacgtatttaagcc 31795373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 32615648 - 32615711
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattt 163  Q
    ||||||||| ||||| ||||||||||  | ||||||||||  ||||||||||||| ||||||||    
T  32615648 tacagggacaaaaacaaaaaacacgcgaacttacagggaccttttacatatttaaaccttattt 32615711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 48568531 - 48568589
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||| ||||||||||||||||||||||  | |||||| |||  ||||||||||||||||    
T  48568531 atacggggacgaaaaccaaaaacacgcgaacttacagagaccttttacatatttaagcc 48568589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 31199306 - 31199249
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||||||||||||| |||| ||||  ||||||||||||  |||||||||| |||||    
T  31199306 tacagggacgaaaacctaaaatacgcgaaattacagggaccttttacatattcaagcc 31199249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 32613941 - 32613883
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaa--ttacagggacgatttacatatttaagcc 157  Q
    ||||||||||||||||||||||||| ||||  ||||| ||||  ||||||||||||||||    
T  32613941 tacagggacgaaaaccaaaaacacg-cgaactttacaaggaccttttacatatttaagcc 32613883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 41879983 - 41879927
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaa 154  Q
    ||||||| |||||||||||||||||| |  | ||||||  |||||||||||||||||    
T  41879983 gatacagagacgaaaaccaaaaacacacgaacttacagaaacgatttacatatttaa 41879927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 45981449 - 45981405
Alignment:
Q  115 caaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||  ||||||| ||||| ||||||||||||||||||    
T  45981449 caaaaacacgcgaaattacaaggacgttttacatatttaagcctt 45981405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 13947916 - 13947746
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  13947916 taccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttag 13947817  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
     ||       |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  13947816 aacaaaaaaagataca-ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacctt 13947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 14089105 - 14088935
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  14089105 taccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttag 14089006  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
     ||       |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  14089005 aacaaaaaaagataca-ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacctt 14088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 1840326 - 1840155
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  1840326 taccacgtcatcctctgtttgccacatgtgtgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttag 1840227  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
     ||       |||||| | || ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1840226 aacaaaaaaagatacaagaacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctt 1840155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 1841651 - 1841814
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||             ||       
T  1841651 gtcatccttcgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaacttacaggggttgttttagaacaaa 1841750  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
        ||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  1841751 aaaagatacagggacaaaaaccaaaaacacgccaaatttcagggacgatttacatatttaagcc 1841814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 40303433 - 40303375
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40303433 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 40303375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 45499445 - 45499390
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45499445 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 45499390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 28563435 - 28563374
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28563435 gatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctt 28563374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 13948491 - 13948573
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttt----tgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||| || ||||| ||||||||||||||    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13948491 gtcatcctctgtttgtcacatgtgcgttttaatttgtaacggaagttgacaggagggacgaaaataaaaaagttattaactta 13948573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 14089698 - 14089780
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttt----tgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||| || ||||| ||||||||||||||    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  14089698 gtcatcctctgtttgtcacatgtgcgttttaatttgtaacggaagttgacaggagggacgaaaataaaaaagttattaactta 14089780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 45499364 - 45499295
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    ||||| ||||||||||||||||||||||  | ||||||||||  |||||||||||||||||||| |||||    
T  45499364 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagccttatctttat 45499295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 44421342 - 44421402
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||| |||||||||| ||||||||||| | ||||||||| |||||||||||||||||||    
T  44421342 gatacaaggacgaaaacaaaaaacacgccaatttacagggatgatttacatatttaagcct 44421402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 45493032 - 45493092
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||||||||||||||  | ||||||||||  |||||||||||||||||    
T  45493032 gatacagggacgaaaaccaaaaacacgcgaatttacagggaccttttacatatttaagcct 45493092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 45500774 - 45500834
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||||||||||||||  | ||||||||||  |||||||||||||||||    
T  45500774 gatacagggacgaaaaccaaaaacacgcgaatttacagggaccttttacatatttaagcct 45500834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 28563513 - 28563458
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    |||||||||| ||  ||||||||||||||||||| |||||||||||||||||||||    
T  28563513 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttatag 28563458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 40304762 - 40304821
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||||||||||||||||||||||||||  | ||||||||||  ||||||||||||||||    
T  40304762 gatacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcc 40304821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 44465091 - 44465154
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatt 162  Q
    ||||| |||||| ||||||||||||||  | |||||||||||||||||||||||||| ||||||    
T  44465091 atacaaggacgagaaccaaaaacacgcgaacttacagggacgatttacatatttaagtcttatt 44465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 18161046 - 18161112
Alignment:
Q  101 acagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    ||||| ||||||| |||||||||||| ||||| | ||||||||||||||||||| ||| ||||||||    
T  18161046 acaggtacgaaaagcaaaaacacgccaaattatatggacgatttacatatttaaacctaatttttat 18161112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 18224847 - 18224912
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    ||||||||| |||||||||||||| |  ||||||||||||  |||||||||||||||||| |||||    
T  18224847 tacagggactaaaaccaaaaacacactaaattacagggaccttttacatatttaagcctttttttt 18224912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 16142284 - 16142216
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    |||||| ||||||||||||||||||||  | ||||| ||||||||||||||||| |||| || ||||||    
T  16142284 atacagagacgaaaaccaaaaacacgcgaacttacaaggacgatttacatattttagccataattttat 16142216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 40303352 - 40303292
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||| ||||||||||||||||||||||  | ||||||||||  |||||||||||||||||    
T  40303352 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcct 40303292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 38730062 - 38730129
Alignment:
Q  98 gatacagggacgaaaa-ccaaaaacacgccgaattacagggacgatttacatatttaagccttatttt 164  Q
    |||||||||||||||| ||||||||||||  | ||||| ||| |||||| ||||||||||||||||||    
T  38730062 gatacagggacgaaaaaccaaaaacacgcgaacttacaaggatgatttatatatttaagccttatttt 38730129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 22060480 - 22060538
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    |||| |||||||||||||||||||||||  | ||||||||||  |||||||||||||||    
T  22060480 gatatagggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagc 22060538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 10345149 - 10345214
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    ||||||||||||||| |||||  |||  |||||||||||  |||||||||||||| ||||||||||    
T  10345149 tacagggacgaaaacaaaaaatgcgcaaaattacagggatcatttacatatttaaaccttattttt 10345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 18159885 - 18159937
Alignment:
Q  115 caaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    |||||||||||| ||||| | ||||||||||||||||||| ||| ||||||||    
T  18159885 caaaaacacgccaaattatatggacgatttacatatttaaacctaatttttat 18159937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 18308242 - 18308182
Alignment:
Q  107 acgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    ||||||| |||||||||| | ||||| | ||||||||||||||||||| ||| ||||||||    
T  18308242 acgaaaaacaaaaacacgtcaaattatatggacgatttacatatttaaacctaatttttat 18308182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 22054391 - 22054331
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    |||||||||||||||||||||  |||  | ||||||||||  |||||||||||||||||||    
T  22054391 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcctta 22054331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 35588185 - 35588125
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||| ||||||||||||||| |||||  | ||||| ||||||||| ||||||||||||||    
T  35588185 atacatggacgaaaaccaaaagcacgcgaacttacatggacgatttccatatttaagcctt 35588125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 40304684 - 40304736
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  40304684 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaactta 40304736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 44097354 - 44097414
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||||||||||||||||||||  | |||||| |||  |||| |||||||||||||    
T  44097354 atacagggacgaaaaccaaaaacacgcgaacttacagagaccttttatatatttaagcctt 44097414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 45492954 - 45493006
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  45492954 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaactta 45493006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 45500696 - 45500748
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  45500696 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaactta 45500748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 20587098 - 20587039
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||||||||||    |||||||||||  ||||||||||||| ||||||||||||||||    
T  20587098 gatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagcc 20587039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 43516455 - 43516396
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||||||||| |||||  |||  ||||||||||||  ||||||||||||||||||    
T  43516455 tacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaagcctt 43516396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 20588476 - 20588518
Alignment:
Q  115 caaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  20588476 caaaaacacgcgaaattacagggacgttttacatatttaagcc 20588518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 38728243 - 38728182
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    |||||| ||||||||||||||||| ||   | |||||||||||| ||||||||||||||||||    
T  38728243 gatacatggacgaaaaccaaaaactcgtgaacttacagggacga-ttacatatttaagcctta 38728182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 6842774 - 6842713
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||||||| |||||||||||||||||  | ||||||| ||  ||||||||||||| ||||    
T  6842774 gatacagggatgaaaaccaaaaacacgcaaacttacaggaaccttttacatatttaaacctt 6842713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 7317449 - 7317392
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
    |||||| |||||||||||||||||||||  | |||||||||   ||||||||||||||    
T  7317449 gatacaaggacgaaaaccaaaaacacgcgaacttacagggatcttttacatatttaag 7317392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 6844097 - 6844157
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||| ||| |||||||||||||||||  | ||||| ||||  |||||||||||||||||    
T  6844097 gatacaaggatgaaaaccaaaaacacgcgaacttacaaggaccttttacatatttaagcct 6844157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 16143596 - 16143656
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||||| |||||||||||    |||| |||||  |||||||||||||||||    
T  16143596 gatacagggacgaaaatcaaaaacacgcaagcttacggggaccttttacatatttaagcct 16143656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 28165717 - 28165657
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||| |||||||||||| |||  | ||||| ||||  |||||||||||||||||    
T  28165717 gatacagggactaaaaccaaaaacgcgctaacttacatggaccttttacatatttaagcct 28165657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 34591784 - 34591724
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||| |||||||||| ||||| || |  | ||||| |||||||||||||||||||||||    
T  34591784 gatacaaggacgaaaacaaaaaatacacaaacttacatggacgatttacatatttaagcct 34591724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 44492311 - 44492371
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||| |||||||||||||||||||||||  | ||||| |||   |||||||||||||||||    
T  44492311 gatagagggacgaaaaccaaaaacacgcaaacttacatggatcgtttacatatttaagcct 44492371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1418826 - 1418995
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag------------ 88  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  1418826 taccacgtcatcctccgtttgccgcatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttag 1418925  T
Q  89 -acnnnnnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
     ||       ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  1418926 aacaaaaaaagatacagggacgaaaacaaaaaacacgtcaaattacagggacgatttacatatttaagcc 1418995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 157
Target Start/End: Complemental strand, 30332446 - 30332283
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||             ||       
T  30332446 gtcatcctccgttttccacatgtgcgtttttgtaacggaagttgacaggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaa 30332347  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
        ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  30332346 aaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagcc 30332283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 25916175 - 25916335
Alignment:
Q  8 tcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnnn 94  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||             ||        
T  25916175 tcatcctccgtttaccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttagaacaaaa 25916274  T
Q  95 nnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
       ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  25916275 aaagatacagggacaaaaaccaaaaacacgccaaattacatggacgatttacatatttaag 25916335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 25914653 - 25914577
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaact 83  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25914653 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaact 25914577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 30333904 - 30334069
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||             ||       
T  30333904 gtcatcctccgtttgccacatgtgcgtttt-gtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaa 30334002  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
        ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  30334003 aaaagatacagggacaaaaaccaaaaacacgccaaattatagggacgacttacatatttaagcctta 30334069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 1417574 - 1417496
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1417574 gtcatcctccgtttgccacatgtgcggtattgtaacggaagttgacgggagggacgaaaataaaaaagttattaactta 1417496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 38624856 - 38624798
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38624856 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 38624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 17554925 - 17554976
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17554925 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 17554976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 16308624 - 16308563
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  16308624 gatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcctt 16308563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 11772623 - 11772674
Alignment:
Q  34 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11772623 ttttgtaacggaagttgacaggagggacgaaaatcaaaaagttattaactta 11772674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 8874275 - 8874333
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||    
T  8874275 atacagggacgaaaaccaaaaacaggtcaaattacagggacgatttacatatttaagcc 8874333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 8872579 - 8872522
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||    
T  8872579 gatacaggaacgaaaaccaaaaacacgccaaattacagggacgaattacatatttaag 8872522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 36619603 - 36619546
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaag 155  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  36619603 gatacagggacgaaaatcaaaaacacgccaaattatagggacgatttacatatttaag 36619546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 39103411 - 39103471
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||| || |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  39103411 gatactggaacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagcct 39103471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 27756785 - 27756845
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||| ||||||||||  | ||| |||||||||||||||||||||||||    
T  27756785 gatacagggacgaaaacaaaaaacacgcgaacttagagggacgatttacatatttaagcct 27756845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 39101765 - 39101709
Alignment:
Q  107 acgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttattt 163  Q
    ||||||||||||||| | || ||||||||||||||||||||||||||||| ||||||    
T  39101765 acgaaaaccaaaaacgcaccaaattacagggacgatttacatatttaagcattattt 39101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 38624775 - 38624714
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    ||||| ||||||||||||||||||||||  | ||||||||||  ||||||||||||||||||    
T  38624775 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcctt 38624714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 39101855 - 39101803
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaac 82  Q
    ||||||||||||| ||  ||||||||||||||||||| |||||||||||||||    
T  39101855 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaac 39101803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 36619682 - 36619627
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    |||||||||| ||  ||||||||||||||||||| ||||||| |||||||||||||    
T  36619682 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagctattaacttatag 36619627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 36621145 - 36621196
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaa 81  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||    
T  36621145 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaa 36621196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 36621233 - 36621286
Alignment:
Q  105 ggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||| || | || ||||||||| |||||||||||||||||||||    
T  36621233 ggacgaaaaccaaagacgcaccaaattacaggaacgatttacatatttaagcct 36621286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 38626170 - 38626231
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||| |||||||||||||||||| ||  | ||||||||||  ||||||||||||||||||    
T  38626170 gatacatggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctt 38626231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 39103330 - 39103387
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttata 87  Q
    ||||||||||||  ||  ||||||||||||||||||  ||||||||||||||||||||    
T  39103330 gcgtttttgtaatagagtttgacgggagggacgaaacgcaaaaagttattaacttata 39103387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 8872659 - 8872604
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttat 86  Q
    ||||||||||||| ||  |||||||| |||||||||| |||||||||||||||||||    
T  8872659 gcgtttttgtaacagagtttgacggg-gggacgaaaagcaaaaagttattaacttat 8872604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 17552108 - 17552056
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaa-atcaaaaagttattaactt 84  Q
    ||||| |||| |||||||||| ||||||||||| |||||||||||||||||||    
T  17552108 tttttttaacagaagttgacgagagggacgaaatatcaaaaagttattaactt 17552056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 38626092 - 38626144
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  38626092 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaactta 38626144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 16182608 - 16182659
Alignment:
Q  116 aaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    ||||||||||| ||||| |||||| |||||||||||||||||| | ||||||    
T  16182608 aaaaacacgccaaattatagggacaatttacatatttaagcctaaattttat 16182659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 17555004 - 17555063
Alignment:
Q  99 atacagggacgaaaa-ccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||||||||||||| ||||||||||||  | ||||| |||| |||||||||||||||||    
T  17555004 atacagggacgaaaaaccaaaaacacgcgaacttacatggacaatttacatatttaagcc 17555063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 18201345 - 18201403
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    |||||| | |||||||| ||||||||||  | |||||||||| ||||||||||||||||    
T  18201345 gatacaagaacgaaaacaaaaaacacgcaaacttacagggacaatttacatatttaagc 18201403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 8874196 - 8874248
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||||||| ||  |||||| ||||||| |||| ||||||||||||||||||    
T  8874196 tttttgtaacagagtttgacgagagggacaaaaagcaaaaagttattaactta 8874248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 11771335 - 11771283
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||| |||| ||||||||| | |||||||||| |||||||||||| ||||||    
T  11771335 tttttttaacagaagttgacagtagggacgaaattcaaaaagttatcaactta 11771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19082835 - 19082749
Alignment:
Q  1 taccaagtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttata 87  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19082835 taccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttata 19082749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 19084016 - 19084091
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaac 82  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19084016 gtcatcctccatttgccacatgtgcgttattgtaacggaagttgacgggagggacgaaaatcaaaaagttattaac 19084091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 1258440 - 1258506
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttt 164  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1258440 gatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccttatttt 1258506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 1256773 - 1256711
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctta 160  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1256773 gatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagcctta 1256711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 8752800 - 8752866
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttt 164  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  8752800 gatacagggacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaagtcttatttt 8752866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 8745491 - 8745432
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8745491 gatatagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 8745432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 7678647 - 7678708
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcctt 159  Q
    |||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  7678647 gatacaaggacaaaaagcaaaaacacgccaaattacagggacgatttacatatttaagcctt 7678708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 2956235 - 2956293
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    |||||| |||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  2956235 gatacaaggacgaaaaccaaaaacacatcaaattacagggacgatttacatatttaagc 2956293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 19084120 - 19084178
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagc 156  Q
    ||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||    
T  19084120 gatacagggacaaaaaccaaaaacacgctaaattacagggacggtttacatatttaagc 19084178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 2956154 - 2956209
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||    
T  2956154 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaactta 2956209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 8745572 - 8745517
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||    
T  8745572 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaactta 8745517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 1256851 - 1256796
Alignment:
Q  33 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag 88  Q
    |||||||||| ||  |||||||||||||||||||  ||||||||||||||||||||    
T  1256851 tttttgtaacagagtttgacgggagggacgaaaagtaaaaagttattaacttatag 1256796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 1258358 - 1258417
Alignment:
Q  30 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaag-ttattaacttatag 88  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||| |||||||| |||||    
T  1258358 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagtttattaacctatag 1258417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 10707734 - 10707675
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||||  ||||||||||  | |||||||||| ||||| ||||||||||||    
T  10707734 atacagggacgaaaataaaaaacacgcgaacttacagggacaatttatatatttaagcct 10707675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 11065656 - 11065723
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    |||||||||||||||||||||  |||  | ||||| ||||  |||||||||||||||||| |||||||    
T  11065656 tacagggacgaaaaccaaaaatgcgcgaacttacaaggaccttttacatatttaagccttgtttttat 11065723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 1443475 - 1443417
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    ||||||||||||||||||||||||||   | ||||||||||  || |||||||||||||    
T  1443475 atacagggacgaaaaccaaaaacacgtgaacttacagggacctttcacatatttaagcc 1443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 7678540 - 7678609
Alignment:
Q  8 tcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 77  Q
    ||||| |||||| ||||| |||  ||||||||||| |||| | |||||||||||||||| ||||| ||||    
T  7678540 tcatcatccgttagccacgtgtatgtttttgtaacagaagctaacgggagggacgaaaagcaaaacgtta 7678609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 8752720 - 8752773
Alignment:
Q  31 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 84  Q
    ||||||||||||  |  ||||||||||||||||||| ||||| |||||||||||    
T  8752720 cgtttttgtaacaaagtttgacgggagggacgaaaagcaaaaggttattaactt 8752773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 19597984 - 19598037
Alignment:
Q  105 ggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||| |||||||||||  ||| || |||||||||| ||||||||||||||||||    
T  19597984 ggaccaaaaccaaaaatgcgcggacttacagggaccatttacatatttaagcct 19598037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 19082724 - 19082696
Alignment:
Q  130 ttacagggacgatttacatatttaagcct 158  Q
    |||||||||||||||||||||||||||||    
T  19082724 ttacagggacgatttacatatttaagcct 19082696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 5544 - 5461
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaat-caaaaagtt-attaacttatag 88  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  5544 gtcatcctccgtttgtcacatgtgcgtttttgtaacggaagttgacgggagggacgaaaataaaaaaagttaattaacttatag 5461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 6711 - 6875
Alignment:
Q  7 gtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatag-------------acnnn 93  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| || ||             ||       
T  6711 gtcatcctccatttgccacatgtgcgttattgtaacggaagttgacgggagggtagaaaatcaaaaagttattaacatacaggggatattttagaacaaa 6810  T
Q  94 nnnngatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
        |||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  6811 aaaagatacaggaacaaaaaccaaaaacacgccaaattacagagacgatttacatatttaagcct 6875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 5433 - 5366
Alignment:
Q  101 acagggacgaaaaccaaaaac--acgccgaattacagggacgatttacatatttaagccttattttta 166  Q
    ||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||| ||||||    
T  5433 acagggacgaaaaccaaaaaacaacgccaaattacagggacgatttacatatttaagccttcttttta 5366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 6895 - 6953
Alignment:
Q  99 atacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcc 157  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  6895 atacagagacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaagcc 6953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 6831 - 6868
Alignment:
Q  48 ttgacgggagggacgaaaatcaaaaagttattaactta 85  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  6831 ttgacgggagagacgaaaagcaaaaagttattaactta 6868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 2110 - 2041
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagccttatttttat 167  Q
    |||||||||||| |||||||||||||||  | ||||| ||||  ||| |||||||||||||| |||||||    
T  2110 gatacagggacggaaaccaaaaacacgcgaacttacaaggacatttttcatatttaagccttgtttttat 2041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 12190 - 12130
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    ||||||||||||||||||||||||||||  | |||| || ||  |||||||||||||||||    
T  12190 gatacagggacgaaaaccaaaaacacgcgaacttaccggaaccttttacatatttaagcct 12130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 8287 - 8337
Alignment:
Q  115 caaaaacacgccgaattacagggacgatttacatatttaagccttattttt 165  Q
    |||||||||||  ||||||||||||| ||| |||||| |||||||||||||    
T  8287 caaaaacacgcgaaattacagggacgttttgcatattcaagccttattttt 8337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 4259 - 4317
Alignment:
Q  100 tacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaagcct 158  Q
    |||||||||||||||||||||  |||  | ||||||||||  |||||||||||||||||    
T  4259 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 4317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 7757 - 7701
Alignment:
Q  98 gatacagggacgaaaaccaaaaacacgccgaattacagggacgatttacatatttaa 154  Q
    |||||||||||||    |||||||||||  ||||||||||||| |||||||||||||    
T  7757 gatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaa 7701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University