View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3229_high_15 (Length: 459)

Name: NF3229_high_15
Description: NF3229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3229_high_15
NF3229_high_15
[»] chr7 (17 HSPs)
chr7 (252-445)||(45967666-45967859)
chr7 (16-168)||(45968010-45968163)
chr7 (166-272)||(45967866-45967973)
chr7 (376-435)||(48392868-48392927)
chr7 (386-435)||(9503975-9504024)
chr7 (389-445)||(23736068-23736124)
chr7 (389-444)||(30404980-30405035)
chr7 (384-433)||(28321819-28321868)
chr7 (396-435)||(12171681-12171720)
chr7 (369-435)||(3498289-3498355)
chr7 (396-446)||(8379159-8379209)
chr7 (389-435)||(12307832-12307878)
chr7 (389-443)||(24211566-24211620)
chr7 (389-430)||(27042184-27042225)
chr7 (396-445)||(33471512-33471561)
chr7 (386-434)||(23092434-23092482)
chr7 (406-438)||(32490621-32490653)
[»] chr4 (30 HSPs)
chr4 (373-435)||(33520620-33520683)
chr4 (377-434)||(34936307-34936364)
chr4 (386-445)||(55131548-55131607)
chr4 (389-435)||(5289717-5289763)
chr4 (376-446)||(11511670-11511740)
chr4 (385-435)||(11511747-11511797)
chr4 (381-435)||(42184718-42184772)
chr4 (396-445)||(11583776-11583825)
chr4 (396-445)||(13743880-13743929)
chr4 (376-445)||(37381120-37381189)
chr4 (396-445)||(43635858-43635907)
chr4 (396-445)||(44639815-44639864)
chr4 (376-444)||(16200169-16200237)
chr4 (370-445)||(23329439-23329514)
chr4 (396-443)||(25856032-25856079)
chr4 (396-443)||(46779365-46779412)
chr4 (396-443)||(50038472-50038519)
chr4 (396-443)||(50045694-50045741)
chr4 (367-445)||(22393807-22393885)
chr4 (389-443)||(46996545-46996599)
chr4 (377-435)||(55131615-55131673)
chr4 (386-435)||(16391444-16391493)
chr4 (386-435)||(16392195-16392244)
chr4 (396-445)||(26206663-26206712)
chr4 (386-435)||(39017522-39017571)
chr4 (386-435)||(50459362-50459411)
chr4 (389-445)||(19754230-19754286)
chr4 (389-445)||(19785520-19785576)
chr4 (389-445)||(31914397-31914453)
chr4 (403-443)||(49806387-49806427)
[»] chr8 (19 HSPs)
chr8 (373-445)||(29730686-29730758)
chr8 (384-443)||(5918242-5918301)
chr8 (376-445)||(34188320-34188389)
chr8 (389-444)||(42835693-42835748)
chr8 (389-443)||(44872280-44872334)
chr8 (396-445)||(43483954-43484003)
chr8 (389-445)||(29110332-29110388)
chr8 (386-445)||(5040080-5040139)
chr8 (376-435)||(34188397-34188456)
chr8 (380-435)||(44282344-44282399)
chr8 (403-445)||(35063529-35063571)
chr8 (376-445)||(7256889-7256958)
chr8 (376-445)||(13832077-13832146)
chr8 (396-445)||(34194582-34194631)
chr8 (396-445)||(38884015-38884064)
chr8 (396-445)||(40716768-40716817)
chr8 (396-444)||(17911421-17911469)
chr8 (389-429)||(35972386-35972426)
chr8 (389-445)||(41178027-41178083)
[»] chr1 (23 HSPs)
chr1 (373-445)||(15013656-15013728)
chr1 (376-432)||(47293186-47293242)
chr1 (386-445)||(28237084-28237143)
chr1 (377-433)||(34598943-34598999)
chr1 (370-445)||(12993520-12993595)
chr1 (376-435)||(23392616-23392675)
chr1 (396-446)||(26423492-26423542)
chr1 (376-442)||(40328944-40329010)
chr1 (389-443)||(45239006-45239060)
chr1 (377-445)||(47293252-47293321)
chr1 (399-443)||(8426799-8426843)
chr1 (396-444)||(39181071-39181119)
chr1 (386-445)||(1252143-1252202)
chr1 (376-435)||(40341809-40341868)
chr1 (380-435)||(47293352-47293407)
chr1 (389-435)||(42835604-42835650)
chr1 (386-443)||(3606273-3606330)
chr1 (400-445)||(4682963-4683008)
chr1 (386-435)||(11249313-11249362)
chr1 (396-445)||(37255148-37255197)
chr1 (400-436)||(7230035-7230071)
chr1 (376-424)||(15013747-15013795)
chr1 (403-443)||(42914607-42914647)
[»] chr6 (14 HSPs)
chr6 (373-444)||(31872847-31872918)
chr6 (386-435)||(15467585-15467634)
chr6 (384-445)||(26498603-26498664)
chr6 (377-432)||(3586010-3586066)
chr6 (386-445)||(30669087-30669146)
chr6 (377-443)||(13397487-13397553)
chr6 (369-433)||(7109011-7109075)
chr6 (389-445)||(21478568-21478624)
chr6 (377-435)||(8029436-8029494)
chr6 (389-443)||(17181362-17181416)
chr6 (389-443)||(26295389-26295443)
chr6 (376-424)||(3586094-3586143)
chr6 (404-445)||(6048025-6048066)
chr6 (384-435)||(6047965-6048017)
[»] chr5 (17 HSPs)
chr5 (376-435)||(36137017-36137076)
chr5 (377-435)||(25257072-25257130)
chr5 (377-435)||(25320862-25320920)
chr5 (370-411)||(16137930-16137971)
chr5 (373-435)||(12165282-12165345)
chr5 (389-435)||(35969056-35969102)
chr5 (389-435)||(39916300-39916346)
chr5 (389-433)||(8409744-8409788)
chr5 (381-443)||(5243337-5243398)
chr5 (389-435)||(20367323-20367369)
chr5 (395-445)||(31947471-31947521)
chr5 (396-442)||(39126086-39126132)
chr5 (389-435)||(42487369-42487415)
chr5 (373-433)||(5243410-5243470)
chr5 (376-440)||(9984923-9984987)
chr5 (389-445)||(15966658-15966714)
chr5 (389-445)||(36329095-36329151)
[»] chr3 (10 HSPs)
chr3 (389-445)||(35760808-35760864)
chr3 (396-445)||(32589337-32589386)
chr3 (370-445)||(8126336-8126411)
chr3 (389-435)||(22995711-22995757)
chr3 (389-439)||(51256582-51256632)
chr3 (400-445)||(4979676-4979721)
chr3 (396-445)||(34205632-34205681)
chr3 (396-445)||(42595806-42595855)
chr3 (405-445)||(13083902-13083942)
chr3 (376-432)||(26043252-26043308)
[»] chr2 (15 HSPs)
chr2 (389-445)||(5144337-5144393)
chr2 (389-445)||(42579034-42579090)
chr2 (389-435)||(27743695-27743741)
chr2 (389-443)||(42579090-42579144)
chr2 (384-433)||(4283701-4283750)
chr2 (389-445)||(2795325-2795381)
chr2 (373-445)||(6006681-6006753)
chr2 (389-445)||(30905139-30905195)
chr2 (376-435)||(20195291-20195350)
chr2 (389-435)||(9436499-9436545)
chr2 (389-435)||(29771733-29771779)
chr2 (389-443)||(36490495-36490548)
chr2 (370-435)||(2795389-2795454)
chr2 (396-445)||(8554693-8554742)
chr2 (388-445)||(13477196-13477253)
[»] scaffold1786 (1 HSPs)
scaffold1786 (376-435)||(512-571)
[»] scaffold0063 (1 HSPs)
scaffold0063 (377-435)||(54637-54695)
[»] scaffold0011 (1 HSPs)
scaffold0011 (376-435)||(13582-13641)
[»] scaffold0622 (1 HSPs)
scaffold0622 (376-438)||(361-423)
[»] scaffold0224 (1 HSPs)
scaffold0224 (389-435)||(22685-22731)
[»] scaffold0236 (1 HSPs)
scaffold0236 (389-445)||(13710-13766)
[»] scaffold0047 (1 HSPs)
scaffold0047 (376-424)||(63528-63576)


Alignment Details
Target: chr7 (Bit Score: 170; Significance: 5e-91; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 252 - 445
Target Start/End: Complemental strand, 45967859 - 45967666
Alignment:
Q  252 aaaaattaaagagttatgcttgaatgtaaatggaaataactttttacaccaacaatacatattcatgaatctcatgcagtttagttataatttccaacaa 351  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |    
T  45967859 aaaaaataaagagttatgcttgaatgtaaatggaaataactttttacaccaacaatacatattcatgaatctgatgcagtttagttatcatttccaacga 45967760  T
Q  352 acactaaaatcgtaagtttattctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45967759 acactaaaatcgtaagtttattctctccgttgtcaattataaacaaatttaactttttaaattcatttaattagtgatgtatgttgttcatatt 45967666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 45968163 - 45968010
Alignment:
Q  16 atgtcaatggataagtataggaagagaaaatgtttacattgagggccaagattctatttctcgccgcagaatccctactgttcaaatttcttc-nnnnnn 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||           
T  45968163 atgtcaatggataagtataggaagagaaaatgtttacattgagggccaagattctatttctcgccgcataatccctactgttcaaatttcttcttttttt 45968064  T
Q  115 ngcccatttagcaaacaacttattttagattttgtggtgaatcatccggatcta 168  Q
     |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  45968063 tgcccatttggcaaacaacttattttagattttgtggtgaatcattcggatcta 45968010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 272
Target Start/End: Complemental strand, 45967973 - 45967866
Alignment:
Q  166 ctacactttcatgctaaaattgttttacatataaacaaatataattacccaacgtaataaaaga-tttatgtaaccgtcattgtttgaaaaattaaagag 264  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  45967973 ctacactttcatggtaaaattgttttacatataaacaaatacaattccccaacgtaataaaagattttatgtacccgtcattgtttgaaaaattaaagag 45967874  T
Q  265 ttatgctt 272  Q
    ||| ||||    
T  45967873 ttacgctt 45967866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 435
Target Start/End: Original strand, 48392868 - 48392927
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| | ||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  48392868 ctccgtttttaattataagcaaattttactttttagattcatttaattagtgatgtatgt 48392927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 435
Target Start/End: Complemental strand, 9504024 - 9503975
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  9504024 aattataagcaaatttaactttttagattcatttaattaatgatgtatgt 9503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 23736124 - 23736068
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| |||| |||||||||||| |||||||||||| |||||||||| |||||||||    
T  23736124 tataagtaaaattaactttttaggttcatttaattaatgatgtatgtagttcatatt 23736068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 30404980 - 30405035
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatat 444  Q
    ||||| ||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  30404980 tataagtaaatttaactttttaggttcattcaattaatgatgtatgtggttcatat 30405035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 28321819 - 28321868
Alignment:
Q  384 tcaattataaataaatttaactttttagattcatttaattagtgatgtat 433  Q
    ||||||||||| |||||| ||||||||  |||||||||||||||||||||    
T  28321819 tcaattataaacaaatttcactttttaagttcatttaattagtgatgtat 28321868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Original strand, 12171681 - 12171720
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  12171681 aaattttactttttagattcatttaattaatgatgtatgt 12171720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 3498289 - 3498355
Alignment:
Q  369 ttattctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||| ||||||| | || |||||  |||||| |||||||||||||||| ||||| ||||||||||    
T  3498289 ttattccctccgttttaaaatataagcaaattttactttttagattcattcaattaatgatgtatgt 3498355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 8379159 - 8379209
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatattg 446  Q
    |||||||||||||||| |||||| ||||| |||||||||| || |||||||    
T  8379159 aaatttaactttttaggttcattcaattaatgatgtatgtggtccatattg 8379209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 12307832 - 12307878
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||||||| || |||||||||||||||||| ||| ||||||||||    
T  12307832 tataaataaaattgactttttagattcatttatttaatgatgtatgt 12307878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 24211566 - 24211620
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    ||||| ||||||| |||||||||||||||| ||||| | |||||||| |||||||    
T  24211566 tataagtaaattttactttttagattcattcaattaataatgtatgtggttcata 24211620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Complemental strand, 27042225 - 27042184
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatg 430  Q
    ||||||||||||| |||||||||||||||| ||||| |||||    
T  27042225 tataaataaatttgactttttagattcattcaattaatgatg 27042184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 33471512 - 33471561
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| | |||||||||||||| ||||| |||||||||| |||||||||    
T  33471512 aaattttattttttagattcattcaattaatgatgtatgtggttcatatt 33471561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 23092482 - 23092434
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatg 434  Q
    ||||||||  ||||||||||||||| | ||||||||||| |||||||||    
T  23092482 aattataagcaaatttaactttttacaatcatttaattaatgatgtatg 23092434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 438
Target Start/End: Original strand, 32490621 - 32490653
Alignment:
Q  406 ttttagattcatttaattagtgatgtatgttgt 438  Q
    ||||||||||||||||||| |||||||||||||    
T  32490621 ttttagattcatttaattaatgatgtatgttgt 32490653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 435
Target Start/End: Complemental strand, 33520683 - 33520620
Alignment:
Q  373 tctctccgttgtcaattataaataaattt-aactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  33520683 tctctccgttgtcgattataaataaattttaactttttagattcatttaattaatgatgtatgt 33520620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 34936364 - 34936307
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatg 434  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||    
T  34936364 tccgttgtcaattataaataaatttaactttttagattcattcagttaatgatgtatg 34936307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 55131548 - 55131607
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||| |||||| ||||||||| |||||| ||||| |||||||||||||| |||||    
T  55131548 aattataaacaaatttgactttttaggttcattcaattaatgatgtatgttgtttatatt 55131607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 5289717 - 5289763
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  5289717 tataaataaattttactttttagattcattcaattaatgatgtatgt 5289763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 446
Target Start/End: Original strand, 11511670 - 11511740
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatattg 446  Q
    ||||||||  ||||||||  |||||||||||||||||||| |||||||| |||||||| | ||| ||||||    
T  11511670 ctccgttgctaattataaggaaatttaactttttagattcgtttaattaatgatgtatatggtttatattg 11511740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 11511797 - 11511747
Alignment:
Q  385 caattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||||||  |||||||||||||||| |||||||||||| ||||||||||    
T  11511797 caattataagcaaatttaactttttaggttcatttaattaatgatgtatgt 11511747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 435
Target Start/End: Complemental strand, 42184772 - 42184718
Alignment:
Q  381 ttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||| |||||||||||||||||| |||||||||||||| ||||| | ||||||||    
T  42184772 ttgttaattataaataaatttaattttttagattcattcaattaataatgtatgt 42184718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 11583825 - 11583776
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  11583825 aaatttgactttttagattcattcaattaatgatgtatgtagttcatatt 11583776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 13743880 - 13743929
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||||||||| |||||||||| || ||||||    
T  13743880 aaattttactttttagattcatttaattaatgatgtatgtggtccatatt 13743929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 445
Target Start/End: Complemental strand, 37381189 - 37381120
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||| | |||||||||||||||| ||||||||||||| || ||||| |||| ||||| ||| |||||    
T  37381189 ctccgttattaattataaataaatttgactttttagattcgttcaattaatgatatatgtggtttatatt 37381120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 43635858 - 43635907
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  43635858 aaattttactttttagattcattcaattaatgatgtatgtggttcatatt 43635907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 44639864 - 44639815
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  44639864 aaatttcactttttagattcattcaattaatgatgtatgtggttcatatt 44639815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 16200169 - 16200237
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatat 444  Q
    |||||||  |||||||||  |||||||||||||||| |||||| | ||| |||||||||| ||||||||    
T  16200169 ctccgttaccaattataagcaaatttaactttttaggttcattcagttaatgatgtatgtggttcatat 16200237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 445
Target Start/End: Complemental strand, 23329514 - 23329439
Alignment:
Q  370 tattctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||||||   || ||||| ||||||| ||||||||| |||||| ||||| |||||||||| || ||||||    
T  23329514 tattctctccgtttcaaaatataagtaaattttactttttaggttcattcaattattgatgtatgtggtccatatt 23329439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 443
Target Start/End: Original strand, 25856032 - 25856079
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||| |||||||||||||||||||| | |||||||||| |||||||    
T  25856032 aaattttactttttagattcatttaatcaatgatgtatgtggttcata 25856079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 443
Target Start/End: Complemental strand, 46779412 - 46779365
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||| | |||||||||||||||||||| |||||||||| |||||||    
T  46779412 aaattttattttttagattcatttaattaatgatgtatgtggttcata 46779365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 443
Target Start/End: Original strand, 50038472 - 50038519
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||    
T  50038472 aaattttactttttagattcattcaattaatgatgtatgtggttcata 50038519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 443
Target Start/End: Original strand, 50045694 - 50045741
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||    
T  50045694 aaattttactttttagattcattcaattaatgatgtatgtggttcata 50045741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 445
Target Start/End: Original strand, 22393807 - 22393885
Alignment:
Q  367 gtttattctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||||||||||  |||| |||  ||||||  |||||||  |||||||||||| ||||||||||  ||||||||    
T  22393807 gtttattctctccgttgctaattttaagcaaatttggctttttatgttcatttaattaatgatgtatgtgattcatatt 22393885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 46996599 - 46996545
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||| |||||| ||||||||| |||||||||||| |||| ||||| |||||||    
T  46996599 tataaacaaattttactttttaggttcatttaattaatgatttatgtagttcata 46996545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 435
Target Start/End: Complemental strand, 55131673 - 55131615
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||||| ||||||||  |||||||||||||||| |||||| ||||| | ||||||||    
T  55131673 tccgttgttaattataagcaaatttaactttttaggttcattcaattaattatgtatgt 55131615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 16391444 - 16391493
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||| |||||||| |||||||||||||| ||||| ||||| ||||    
T  16391444 aattataaacaaatttaattttttagattcattcaattaatgatgcatgt 16391493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 16392195 - 16392244
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||||||||||||||| |||||| |||||||  |||| ||||||||||    
T  16392195 aattataaataaatttaattttttaaattcattcgattaatgatgtatgt 16392244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 26206712 - 26206663
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| ||||||||| |||||||||||| |||||||||| || ||||||    
T  26206712 aaattttactttttaggttcatttaattaatgatgtatgtggtccatatt 26206663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 39017522 - 39017571
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||  ||||||||||||||| |||||||| |||| ||||||||||    
T  39017522 aattataagcaaatttaactttttatattcatttcattaatgatgtatgt 39017571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 50459362 - 50459411
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||||||||||||||| | |||| ||||||||||||| |||| |||||    
T  50459362 aattataaataaatttaattatttaaattcatttaattaatgatatatgt 50459411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 19754230 - 19754286
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| ||||||| |||||||||||||||| ||||| |||| ||||| || ||||||    
T  19754230 tataagtaaattttactttttagattcattcaattaatgatatatgtggtccatatt 19754286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 19785576 - 19785520
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| ||||||| |||||||||||||||| ||||| |||| ||||| || ||||||    
T  19785576 tataagtaaattttactttttagattcattcaattaatgatatatgtggtccatatt 19785520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 31914453 - 31914397
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| |||| || |||||||||||||||||| ||| |||||||||| || ||||||    
T  31914453 tataagtaaaattgactttttagattcatttatttaatgatgtatgtggtacatatt 31914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 49806387 - 49806427
Alignment:
Q  403 actttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||||||||||||||||||| |||||||| | |||||||    
T  49806387 actttttagattcatttaattaatgatgtatatagttcata 49806427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 29730686 - 29730758
Alignment:
Q  373 tctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||| ||||||||||  |||||||| ||||| |||||||||||||| |||||||||| || ||||||    
T  29730686 tctctccgttctcaattataagcaaatttaattttttggattcatttaattaatgatgtatgtggtccatatt 29730758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 5918301 - 5918242
Alignment:
Q  384 tcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||||||||||||||| ||||||||| |||||| ||||| |||||||||| |||||||    
T  5918301 tcaattataaataaatttgactttttagcttcattaaattaatgatgtatgtggttcata 5918242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 445
Target Start/End: Original strand, 34188320 - 34188389
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||| | || ||||||||||||| ||||||||| |||||| ||||| ||||||||||| ||||||||    
T  34188320 ctccgttttaaaatataaataaatttgactttttaggttcattcaattaatgatgtatgttattcatatt 34188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 42835693 - 42835748
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatat 444  Q
    |||||| |||||| ||||||||| |||||||||||| |||||||||| ||||||||    
T  42835693 tataaagaaattttactttttaggttcatttaattaatgatgtatgtggttcatat 42835748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 44872280 - 44872334
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||||||| ||||||||||||||||||| | |||||||| ||||| |||||||    
T  44872280 tataaataaaattaactttttagattcattcatttagtgatatatgtggttcata 44872334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 43483954 - 43484003
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  43483954 aaatttcactttttagattcattcaattaatgatgtatgtggttcatatt 43484003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 29110388 - 29110332
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||||||| |||||||||||| ||| ||||| ||||||||||  ||||||||    
T  29110388 tataaataaattttactttttagatttattcaattaatgatgtatgtgattcatatt 29110332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 5040080 - 5040139
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||| ||||||| || ||||||||||||| ||||| |||||||||| || ||||||    
T  5040080 aattataagtaaatttgacattttagattcattcaattaatgatgtatgtggtccatatt 5040139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 34188456 - 34188397
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| | || ||||||||||||| ||||||||| |||||| ||||| ||||||||||    
T  34188456 ctccgttcttaaatataaataaattttactttttaggttcattcaattaatgatgtatgt 34188397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 435
Target Start/End: Complemental strand, 44282399 - 44282344
Alignment:
Q  380 gttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||| |||||||||  |||||||| |||||||||||||| ||||| ||||||||||    
T  44282399 gttgccaattataagcaaatttaattttttagattcattcaattaatgatgtatgt 44282344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 35063571 - 35063529
Alignment:
Q  403 actttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||| |||||||||||| |||||||||| |||||||||    
T  35063571 actttttaggttcatttaattaatgatgtatgtggttcatatt 35063529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 445
Target Start/End: Original strand, 7256889 - 7256958
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||| | || |||||| |||||| |||||||||||||||| ||||| | |||||||| || ||||||    
T  7256889 ctccgttttgaaatataaacaaattttactttttagattcattcaattaataatgtatgtggtccatatt 7256958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 445
Target Start/End: Complemental strand, 13832146 - 13832077
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||| | || ||||||||||||| |||| ||| ||||||| ||||| |||| ||||| |||||||||    
T  13832146 ctccgtttttaaatataaataaatttgacttcttaaattcattcaattaatgatatatgtggttcatatt 13832077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 34194582 - 34194631
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| || ||||||    
T  34194582 aaattttactttttagattcattcaattaatgatgtatgtggtccatatt 34194631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 38884064 - 38884015
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| ||||||||| |||||| ||||| ||||||||||||| ||||||    
T  38884064 aaattttactttttaggttcattcaattaatgatgtatgttgtccatatt 38884015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 40716768 - 40716817
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| || ||||||    
T  40716768 aaattttactttttagattcattcaattaatgatgtatgtggtacatatt 40716817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 17911469 - 17911421
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatat 444  Q
    |||||| ||||||||| |||||| |||||||||||||||| || |||||    
T  17911469 aaattttactttttaggttcattcaattagtgatgtatgtggtccatat 17911421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 429
Target Start/End: Original strand, 35972386 - 35972426
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgat 429  Q
    ||||||||||||| |||||||||||||||| ||||| ||||    
T  35972386 tataaataaatttgactttttagattcattcaattaatgat 35972426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 41178083 - 41178027
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||| |||||||||||||||| ||||| ||||| |||| ||| |||||    
T  41178083 tataaacaaatttgactttttagattcattcaattaatgatgcatgtggtttatatt 41178027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 15013656 - 15013728
Alignment:
Q  373 tctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||| ||||| | |||||| | |||||||||    
T  15013656 tctctccgttttcaattataagtaaatttgactttttagattcattcaattaataatgtatttggttcatatt 15013728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 47293186 - 47293242
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgta 432  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  47293186 ctccgttgccaattataagtaaatttaattttttagattcatttaattaatgatgta 47293242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 28237084 - 28237143
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||||||||| ||||||||||||||||| |||| |||||||||| | |||||||    
T  28237084 aattataaataaatttgactttttagattcattttattaatgatgtatgtgggtcatatt 28237143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 34598999 - 34598943
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtat 433  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||| ||||||||    
T  34598999 tccgttttcaattataagtaaatttgactttttagattcattcaattaatgatgtat 34598943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 445
Target Start/End: Original strand, 12993520 - 12993595
Alignment:
Q  370 tattctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| ||||||| | || ||||||||||||| | ||||||| |||||| ||||| |||||||||| |||||||||    
T  12993520 tattccctccgttctaaaatataaataaatttgattttttaggttcattcaattaatgatgtatgtggttcatatt 12993595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 23392675 - 23392616
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| | ||||||||  |||||| |||||||||||||||||||||| ||||||||||    
T  23392675 ctccgtttttaattataagcaaattttactttttagattcatttaattattgatgtatgt 23392616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 26423542 - 26423492
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatattg 446  Q
    |||||||| || ||||||||||||||||| |||||||||| ||||||||||    
T  26423542 aaatttaatttcttagattcatttaattaatgatgtatgtggttcatattg 26423492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 442
Target Start/End: Complemental strand, 40329010 - 40328944
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcat 442  Q
    ||||||| | || |||||| |||||| |||||||||||||||| ||||| |||||||||| ||||||    
T  40329010 ctccgtttttaaatataaacaaattttactttttagattcattcaattaatgatgtatgtagttcat 40328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 45239006 - 45239060
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    ||||| ||||||| |||||||||||||||||||| | |||||||||| |||||||    
T  45239006 tataagtaaattttactttttagattcatttaatcaatgatgtatgtggttcata 45239060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 445
Target Start/End: Original strand, 47293252 - 47293321
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttt-tagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||||| |||||| |||||| | |||| |||||||||| ||||| |||||||||| |||||||||    
T  47293252 tccgttgtcaactataaacaaatttgatttttttagattcattcaattaatgatgtatgtggttcatatt 47293321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 443
Target Start/End: Complemental strand, 8426843 - 8426799
Alignment:
Q  399 tttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||||||||||||||||||||||| |||||||| | |||||||    
T  8426843 tttaactttttagattcatttaattaatgatgtatttggttcata 8426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 444
Target Start/End: Original strand, 39181071 - 39181119
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatat 444  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||||    
T  39181071 aaattttactttttagattcattcaattaatgatgtatgtggttcatat 39181119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 1252143 - 1252202
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||  ||| |||||||||||| |||||| ||||| |||||||||| |||||||||    
T  1252143 aattataagcaaaattaactttttaggttcattcaattaatgatgtatgtggttcatatt 1252202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 40341868 - 40341809
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| | || |||||| |||||| ||||| |||||||||||||||| ||||||||||    
T  40341868 ctccgtttttaaatataaacaaattttactttatagattcatttaattaatgatgtatgt 40341809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 435
Target Start/End: Complemental strand, 47293407 - 47293352
Alignment:
Q  380 gttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||||  |||||||||||||||||||||||  |||| | ||||||||    
T  47293407 gttgtcaattataagcaaatttaactttttagattcattcgattaattatgtatgt 47293352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 42835604 - 42835650
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||| | |||||||||||||||||||| | ||||||||    
T  42835604 tataaataaattttattttttagattcatttaattaataatgtatgt 42835650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 3606273 - 3606330
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    ||||||||  ||| || |||||||||||||||| ||||| |||||||||| |||||||    
T  3606273 aattataagcaaaattgactttttagattcattcaattaatgatgtatgtggttcata 3606330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 445
Target Start/End: Original strand, 4682963 - 4683008
Alignment:
Q  400 ttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||||||||| ||| ||||| |||||||||| |||||||||    
T  4682963 ttaactttttagatttattcaattaatgatgtatgtggttcatatt 4683008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 11249313 - 11249362
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||||||||||||||| ||||||| || || ||||| ||||    
T  11249313 aattataaataaatttaactttttatattcattcaactaatgatgcatgt 11249362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 37255148 - 37255197
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| || ||||||    
T  37255148 aaattttactttttagattcattcaattaatgatgtatgtggtccatatt 37255197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 7230035 - 7230071
Alignment:
Q  400 ttaactttttagattcatttaattagtgatgtatgtt 436  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  7230035 ttaactttttagattcattcaattaatgatgtatgtt 7230071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 15013795 - 15013747
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaatta 424  Q
    ||||||||| ||||||||| |||||||||||||||| | |||| |||||    
T  15013795 ctccgttgttaattataaacaaatttaactttttaggtacattcaatta 15013747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 42914647 - 42914607
Alignment:
Q  403 actttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||||||||||||||| ||| |||||||||| |||||||    
T  42914647 actttttagattcatttatttaatgatgtatgtggttcata 42914607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 31872847 - 31872918
Alignment:
Q  373 tctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatat 444  Q
    ||||||| |||||||||||||  |||||||| ||||||| |||||| ||||| |||||||||| ||||||||    
T  31872847 tctctccattgtcaattataagaaaatttaaatttttaggttcattcaattaatgatgtatgtggttcatat 31872918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 15467585 - 15467634
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  15467585 aattataagtaaatttgactttttagattcatttaattattgatgtatgt 15467634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 26498603 - 26498664
Alignment:
Q  384 tcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||||||||||||||||||||| ||| || ||||| |||||||| | |||||||||    
T  26498603 tcaattataaataaatttaactttttaggttccttcaattaatgatgtatatggttcatatt 26498664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 3586010 - 3586066
Alignment:
Q  377 tccgttgtcaattataaataaattt-aactttttagattcatttaattagtgatgta 432  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||| |||||||    
T  3586010 tccgttgtcaattataaacaaattttaaatttttagattcatttaattaatgatgta 3586066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 30669087 - 30669146
Alignment:
Q  386 aattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||| ||| || | |||||||||||||||||||| |||||||||| |||||||||    
T  30669087 aattataaacaaaattgattttttagattcatttaattaatgatgtatgtggttcatatt 30669146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 443
Target Start/End: Complemental strand, 13397553 - 13397487
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||||||||||||||| |||||||| || |||| |||||| |||||  ||||||||| |||||||    
T  13397553 tccgttgtcaattataaacaaatttaaattcttaggttcattcaattaaagatgtatgtagttcata 13397487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 7109011 - 7109075
Alignment:
Q  369 ttattctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtat 433  Q
    |||||| ||||||| | || |||||| ||| ||||||||||||||||||| | ||||||||||||    
T  7109011 ttattccctccgtttttaaatataaacaaaattaactttttagattcattcatttagtgatgtat 7109075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 21478568 - 21478624
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| ||| || |||||||||||||||| ||||| |||||||||| |||||||||    
T  21478568 tataaacaaaattgactttttagattcattcaattaatgatgtatgtggttcatatt 21478624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 435
Target Start/End: Complemental strand, 8029494 - 8029436
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||| | ||||||||| |||||| |||||||||||||||| ||||| |||| |||||    
T  8029494 tccgttattaattataaaaaaatttgactttttagattcattcaattaatgatttatgt 8029436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 17181416 - 17181362
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||| |||||| |||||||||||||||| ||||| || ||||||| |||||||    
T  17181416 tataaacaaattttactttttagattcattcaattaatgttgtatgtagttcata 17181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 26295389 - 26295443
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    |||||| |||||| |||||||||||||||  ||||| |||||||||| |||||||    
T  26295389 tataaacaaattttactttttagattcatgcaattaatgatgtatgtggttcata 26295443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 3586143 - 3586094
Alignment:
Q  376 ctccgttgtcaattataaataaa-tttaactttttagattcatttaatta 424  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||| |||||    
T  3586143 ctccgttgtcaattataaataaattttaaatttttaggttcattcaatta 3586094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 445
Target Start/End: Complemental strand, 6048066 - 6048025
Alignment:
Q  404 ctttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||||||||| ||||| |||||||||| |||||||||    
T  6048066 ctttttagattcattcaattaatgatgtatgtggttcatatt 6048025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 435
Target Start/End: Original strand, 6047965 - 6048017
Alignment:
Q  384 tcaattataaataaattta-actttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||| ||||||  |||||||||||||||| ||||| ||||||||||    
T  6047965 tcaattataaacaaattttgactttttagattcattcaattaatgatgtatgt 6048017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 435
Target Start/End: Original strand, 36137017 - 36137076
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||||||  |||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  36137017 ctccgttgttgattataaacaaatttaactttttagattcattcaattaatgatgtatgt 36137076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 25257072 - 25257130
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||||||| | ||||||||    
T  25257072 tccgttgccaattataaacaaatttaacttttaagattcatttaattaattatgtatgt 25257130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 25320862 - 25320920
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||||||| | ||||||||    
T  25320862 tccgttgccaattataaacaaatttaacttttaagattcatttaattaattatgtatgt 25320920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 16137971 - 16137930
Alignment:
Q  370 tattctctccgttgtcaattataaataaatttaactttttag 411  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  16137971 tattctctccgttgttaattataaataaatttaactttttag 16137930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 435
Target Start/End: Original strand, 12165282 - 12165345
Alignment:
Q  373 tctctccgttgtcaattataaataaattta-actttttagattcatttaattagtgatgtatgt 435  Q
    |||||||||||| ||||||||  ||||||  |||||||||||||||||||||| ||||||||||    
T  12165282 tctctccgttgttaattataagcaaattttgactttttagattcatttaattaatgatgtatgt 12165345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 35969056 - 35969102
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||||    
T  35969056 tataaacaaattttactttttagattcatttaattaatgatgtatgt 35969102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 39916300 - 39916346
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  39916300 tataagtaaattttactttttagattcatttaattattgatgtatgt 39916346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 433
Target Start/End: Complemental strand, 8409788 - 8409744
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtat 433  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||    
T  8409788 tataaataaattttactttttagattcattcaattaatgatgtat 8409744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 443
Target Start/End: Original strand, 5243337 - 5243398
Alignment:
Q  381 ttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    ||||| |||||||  ||||||||||||||| ||| ||||||||| |||||||||| |||||||    
T  5243337 ttgtcgattataagcaaatttaacttttta-atttatttaattaatgatgtatgtggttcata 5243398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 20367323 - 20367369
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||| |||||| |||||||||||||||| ||||| ||||||||||    
T  20367323 tataaacaaattttactttttagattcattcaattaatgatgtatgt 20367369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 31947471 - 31947521
Alignment:
Q  395 taaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||| |||||||||||||||| ||||| | |||||||| |||||||||    
T  31947471 taaatttgactttttagattcattcaattaattatgtatgtggttcatatt 31947521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 39126132 - 39126086
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcat 442  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||    
T  39126132 aaattttactttttagattcattcaattaatgatgtatgtggttcat 39126086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 42487369 - 42487415
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  42487369 tataaataaattttaatttttagaatcatttaattaatgatgtatgt 42487415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 5243470 - 5243410
Alignment:
Q  373 tctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtat 433  Q
    |||||||||||  ||||||||| |||||| |||||||| ||||||| ||||| | ||||||    
T  5243470 tctctccgttgcaaattataaacaaatttgactttttaaattcattcaattaattatgtat 5243410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 9984923 - 9984987
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttc 440  Q
    ||||||| | ||||||||  |||||| | ||||||| |||||||||||| |||||||||| ||||    
T  9984923 ctccgtttttaattataagcaaattttattttttaggttcatttaattaatgatgtatgtggttc 9984987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 15966658 - 15966714
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| |||| |||||||||||| |||||| ||||| |||||||||| ||| |||||    
T  15966658 tataagtaaaattaactttttaggttcattcaattaatgatgtatgtggtttatatt 15966714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 36329095 - 36329151
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||||||| | ||||||| |||||| ||||| |||| ||||| |||||||||    
T  36329095 tataaataaatttgattttttaggttcattcaattaatgatatatgtggttcatatt 36329151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 35760864 - 35760808
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| ||||||| |||||||||||||||||||||| | |||||||| |||||||||    
T  35760864 tataagtaaattttactttttagattcatttaattaataatgtatgtggttcatatt 35760808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 32589337 - 32589386
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  32589337 aaatttgactttttagattcattcaattaatgatgtatgtggttcatatt 32589386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 445
Target Start/End: Original strand, 8126336 - 8126411
Alignment:
Q  370 tattctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||||||   || |||||| |||||| ||||||||| |||||  ||||| |||||||||| |||||||||    
T  8126336 tattctctccgtttcaaaatataaacaaattttactttttaggttcatggaattaatgatgtatgtggttcatatt 8126411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 22995711 - 22995757
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||| ||||||| ||||||||| |||||||||||| ||||||||||    
T  22995711 tataagtaaattttactttttaggttcatttaattaatgatgtatgt 22995757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 439
Target Start/End: Original strand, 51256582 - 51256632
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgtt 439  Q
    |||||| |||||| ||||||||| |||||| ||||| ||||||||||||||    
T  51256582 tataaacaaattttactttttaggttcattcaattaatgatgtatgttgtt 51256632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 4979721 - 4979676
Alignment:
Q  400 ttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||||| |||||| |||||  |||||||||||||||||||    
T  4979721 ttaactttttaggttcattaaattaaggatgtatgttgttcatatt 4979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 34205681 - 34205632
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||| ||||||||||||||||| |||||||||| || ||||||    
T  34205681 aaattttacttcttagattcatttaattaatgatgtatgtggtccatatt 34205632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 42595855 - 42595806
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||| ||||| |||||||||| || ||||||    
T  42595855 aaattttactttttagattcattcaattaatgatgtatgtggtccatatt 42595806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 445
Target Start/End: Original strand, 13083902 - 13083942
Alignment:
Q  405 tttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||| |||||| ||||| ||||||||||||||||||||    
T  13083902 tttttaggttcattcaattaatgatgtatgttgttcatatt 13083942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 26043252 - 26043308
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgta 432  Q
    ||||||| | || ||||| ||||||| |||||||||||||||| ||||| |||||||    
T  26043252 ctccgtttttaaatataagtaaattttactttttagattcattgaattaatgatgta 26043308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 5144393 - 5144337
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||| || ||||||    
T  5144393 tataaataaattttactttttaggttcatttaattaatgatgtatgtggtccatatt 5144337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 42579034 - 42579090
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||| || ||||||    
T  42579034 tataaataaattttactttttaaattcatttaattaatgatgtatgtagtccatatt 42579090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 27743741 - 27743695
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  27743741 tataaataaattttactttttagattcattcaattaatgatgtatgt 27743695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 42579144 - 42579090
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    ||||| ||||||| |||||||||||||||| ||||| |||||||||| |||||||    
T  42579144 tataagtaaattttactttttagattcattcaattaatgatgtatgtggttcata 42579090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 4283701 - 4283750
Alignment:
Q  384 tcaattataaataaatttaactttttagattcatttaattagtgatgtat 433  Q
    ||||||||||| ||||||||||||||| ||||||||||||  ||||||||    
T  4283701 tcaattataaacaaatttaactttttaaattcatttaattgatgatgtat 4283750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 2795325 - 2795381
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| ||||| | |||||||| ||||||||||||| |||||||||| |||||||||    
T  2795325 tataagtaaatatgactttttaaattcatttaattaatgatgtatgtggttcatatt 2795381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 6006681 - 6006753
Alignment:
Q  373 tctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||||||| | || |||||||||| || |||||||||||||||| | ||| |||||||||| || ||||||    
T  6006681 tctctccgtttttaaatataaataaaattgactttttagattcattgatttaatgatgtatgtggtacatatt 6006753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 30905139 - 30905195
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||| ||||||||| |||||||||||| |||||||||| || ||||||    
T  30905139 tataaacaaattttactttttaggttcatttaattattgatgtatgtggtccatatt 30905195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 435
Target Start/End: Original strand, 20195291 - 20195350
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| | || ||||| ||||||| |||||||||||||||| ||||| ||||||||||    
T  20195291 ctccgttttaaaatataagtaaattttactttttagattcattcaattaatgatgtatgt 20195350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 9436545 - 9436499
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  9436545 tatagataaatttgactttttatattcatttaattaatgatgtatgt 9436499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 29771733 - 29771779
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    |||||| |||||| |||||||||||||||| ||||| ||||||||||    
T  29771733 tataaacaaattttactttttagattcattcaattaatgatgtatgt 29771779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 36490495 - 36490548
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcata 443  Q
    ||||||||| ||||| |||||||||||||| ||||| |||||||||| |||||||    
T  36490495 tataaataattttaa-tttttagattcattcaattaatgatgtatgtggttcata 36490548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 435
Target Start/End: Complemental strand, 2795454 - 2795389
Alignment:
Q  370 tattctctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||| | || |||||  |||||| ||||||||| |||||| ||||| ||||||||||    
T  2795454 tattctctccgttttaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgt 2795389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 8554693 - 8554742
Alignment:
Q  396 aaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||||||||||||||||||||| |||| ||||| || ||||||    
T  8554693 aaattttactttttagattcatttaattaatgatatatgtggtccatatt 8554742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 13477196 - 13477253
Alignment:
Q  388 ttataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    |||||| |||| || |||||||||||||||||||||| || |||||||  ||||||||    
T  13477196 ttataagtaaaattgactttttagattcatttaattaatgttgtatgtaattcatatt 13477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 435
Target Start/End: Original strand, 512 - 571
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| | ||||||||  |||||| |||||||||||||||||||||| ||||||||||    
T  512 ctccgtttttaattataagcaaattttactttttagattcatttaattattgatgtatgt 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 54637 - 54695
Alignment:
Q  377 tccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||||||||||||||||| ||||||  ||| || ||||| ||||||||||    
T  54637 tccgttgtcaattataaataaatttaattttttatgttcgttcaattaatgatgtatgt 54695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 435
Target Start/End: Original strand, 13582 - 13641
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||| | || ||||||||||||| | ||||||  |||||||||||||||||||||||    
T  13582 ctccgttttaaaatataaataaattttattttttatgttcatttaattagtgatgtatgt 13641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 438
Target Start/End: Complemental strand, 423 - 361
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaattagtgatgtatgttgt 438  Q
    ||||||| | || |||||| |||||| | ||||||| |||||||||||| |||||||||||||    
T  423 ctccgttttaaaatataaacaaattttattttttaggttcatttaattaatgatgtatgttgt 361  T

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Target: scaffold0224 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 22685 - 22731
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgt 435  Q
    ||||||||||||| | |||||||||||||||||||| | ||||||||    
T  22685 tataaataaattttattttttagattcatttaattaataatgtatgt 22731  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 13710 - 13766
Alignment:
Q  389 tataaataaatttaactttttagattcatttaattagtgatgtatgttgttcatatt 445  Q
    ||||| |||| || |||||||||||||||| ||||| |||||||||| || ||||||    
T  13710 tataagtaaaattgactttttagattcattcaattaatgatgtatgtggtccatatt 13766  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 63576 - 63528
Alignment:
Q  376 ctccgttgtcaattataaataaatttaactttttagattcatttaatta 424  Q
    ||||||| ||||||||||  |||||| ||||||||| ||||||||||||    
T  63576 ctccgttatcaattataagcaaatttgactttttaggttcatttaatta 63528  T

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