View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3229_high_85 (Length: 304)

Name: NF3229_high_85
Description: NF3229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3229_high_85
NF3229_high_85
[»] chr5 (35 HSPs)
chr5 (22-171)||(2610396-2610545)
chr5 (244-297)||(38396178-38396231)
chr5 (244-297)||(39761373-39761426)
chr5 (244-297)||(41411819-41411872)
chr5 (245-297)||(4843684-4843736)
chr5 (245-297)||(36810832-36810884)
chr5 (243-297)||(12736296-12736350)
chr5 (244-302)||(42341148-42341206)
chr5 (244-297)||(459491-459544)
chr5 (244-297)||(4912560-4912613)
chr5 (244-297)||(5575077-5575130)
chr5 (244-297)||(6844963-6845016)
chr5 (244-297)||(8407403-8407456)
chr5 (244-297)||(9475201-9475254)
chr5 (244-297)||(11445863-11445916)
chr5 (244-297)||(12403581-12403634)
chr5 (244-297)||(12799121-12799174)
chr5 (244-297)||(13306355-13306408)
chr5 (244-297)||(17526860-17526913)
chr5 (244-297)||(21639933-21639986)
chr5 (244-297)||(26395410-26395463)
chr5 (244-297)||(27257041-27257094)
chr5 (244-297)||(32273161-32273214)
chr5 (244-297)||(38465871-38465924)
chr5 (244-297)||(38482976-38483029)
chr5 (244-297)||(39048497-39048550)
chr5 (244-297)||(39406080-39406133)
chr5 (244-297)||(39760591-39760644)
chr5 (244-297)||(40459499-40459552)
chr5 (245-297)||(1830200-1830252)
chr5 (245-297)||(17587256-17587308)
chr5 (245-297)||(25481868-25481919)
chr5 (245-297)||(38395404-38395456)
chr5 (245-297)||(40196022-40196074)
chr5 (245-297)||(40315667-40315719)
[»] chr4 (33 HSPs)
chr4 (245-296)||(40131037-40131088)
chr4 (244-297)||(1194955-1195008)
chr4 (244-297)||(13994533-13994586)
chr4 (244-297)||(6259064-6259117)
chr4 (244-297)||(18436409-18436461)
chr4 (244-297)||(26477125-26477178)
chr4 (244-297)||(34825469-34825522)
chr4 (244-297)||(55602007-55602060)
chr4 (245-297)||(40132558-40132610)
chr4 (246-297)||(22731859-22731910)
chr4 (244-294)||(6644949-6644999)
chr4 (244-302)||(32859946-32860004)
chr4 (244-297)||(3886177-3886229)
chr4 (244-297)||(6194142-6194195)
chr4 (244-297)||(13993748-13993801)
chr4 (244-297)||(18436665-18436718)
chr4 (244-297)||(22525301-22525354)
chr4 (244-297)||(23466410-23466463)
chr4 (244-297)||(28255952-28256005)
chr4 (244-297)||(29245450-29245503)
chr4 (244-297)||(30357280-30357333)
chr4 (244-297)||(33821107-33821160)
chr4 (244-297)||(36928484-36928537)
chr4 (244-297)||(37998805-37998858)
chr4 (244-297)||(41744915-41744968)
chr4 (244-297)||(41790219-41790272)
chr4 (244-297)||(41903995-41904048)
chr4 (244-297)||(45895387-45895440)
chr4 (244-297)||(50181273-50181326)
chr4 (244-297)||(50182056-50182109)
chr4 (245-297)||(28255170-28255222)
chr4 (245-297)||(42591932-42591984)
chr4 (244-288)||(53572754-53572798)
[»] chr3 (34 HSPs)
chr3 (244-304)||(53627201-53627261)
chr3 (244-295)||(883397-883448)
chr3 (247-297)||(38598890-38598940)
chr3 (244-297)||(23323229-23323282)
chr3 (244-297)||(40782674-40782727)
chr3 (244-297)||(45078354-45078407)
chr3 (244-302)||(9717935-9717993)
chr3 (244-302)||(10120702-10120760)
chr3 (244-302)||(19961534-19961592)
chr3 (247-297)||(52961693-52961743)
chr3 (244-297)||(10435435-10435488)
chr3 (244-297)||(11653834-11653887)
chr3 (244-297)||(13342398-13342451)
chr3 (244-297)||(13737764-13737817)
chr3 (245-297)||(23336779-23336831)
chr3 (244-297)||(23581744-23581797)
chr3 (244-297)||(24086114-24086167)
chr3 (244-297)||(25068354-25068407)
chr3 (244-297)||(33305174-33305227)
chr3 (245-302)||(34940938-34940995)
chr3 (244-297)||(34941715-34941768)
chr3 (244-297)||(36791775-36791828)
chr3 (244-297)||(39172536-39172589)
chr3 (244-297)||(40066603-40066656)
chr3 (244-297)||(40163060-40163112)
chr3 (244-297)||(42856816-42856869)
chr3 (244-297)||(46651190-46651243)
chr3 (244-297)||(49256452-49256505)
chr3 (245-297)||(20495327-20495378)
chr3 (245-297)||(23324012-23324064)
chr3 (245-297)||(36259392-36259444)
chr3 (244-296)||(43727826-43727878)
chr3 (245-297)||(50672638-50672690)
chr3 (245-297)||(52170952-52171004)
[»] chr1 (40 HSPs)
chr1 (244-303)||(29674318-29674377)
chr1 (245-297)||(4470259-4470311)
chr1 (244-297)||(29330093-29330146)
chr1 (244-297)||(30751150-30751203)
chr1 (244-297)||(30752961-30753014)
chr1 (244-297)||(35894087-35894140)
chr1 (244-297)||(51619431-51619484)
chr1 (245-297)||(11992789-11992841)
chr1 (245-297)||(13158852-13158904)
chr1 (245-297)||(22776200-22776252)
chr1 (245-297)||(28437914-28437966)
chr1 (247-297)||(38456598-38456648)
chr1 (244-297)||(3898463-3898516)
chr1 (244-297)||(8384157-8384210)
chr1 (244-297)||(11201920-11201973)
chr1 (244-297)||(18054495-18054548)
chr1 (244-297)||(20898536-20898589)
chr1 (244-297)||(20899317-20899370)
chr1 (244-297)||(24253139-24253192)
chr1 (244-297)||(24982667-24982720)
chr1 (244-297)||(25859638-25859691)
chr1 (244-297)||(27234254-27234307)
chr1 (244-297)||(28297333-28297386)
chr1 (244-297)||(29329312-29329365)
chr1 (244-297)||(29358414-29358467)
chr1 (244-297)||(32074723-32074775)
chr1 (244-297)||(32815105-32815158)
chr1 (244-297)||(36723306-36723358)
chr1 (244-297)||(37587020-37587073)
chr1 (244-297)||(37612853-37612906)
chr1 (244-297)||(37613634-37613687)
chr1 (244-297)||(38457376-38457429)
chr1 (244-297)||(38617979-38618032)
chr1 (244-297)||(43680386-43680439)
chr1 (244-297)||(52869680-52869733)
chr1 (246-302)||(22775463-22775519)
chr1 (245-297)||(31676444-31676496)
chr1 (245-297)||(42246958-42247010)
chr1 (245-297)||(44396488-44396540)
chr1 (245-297)||(49596001-49596053)
[»] scaffold0196 (1 HSPs)
scaffold0196 (244-297)||(1854-1907)
[»] scaffold0031 (1 HSPs)
scaffold0031 (244-297)||(104520-104573)
[»] chr8 (32 HSPs)
chr8 (244-297)||(2657616-2657669)
chr8 (244-297)||(10443080-10443133)
chr8 (244-297)||(28776805-28776858)
chr8 (245-297)||(11650770-11650822)
chr8 (244-296)||(31918604-31918656)
chr8 (244-294)||(9737171-9737221)
chr8 (244-302)||(11651481-11651539)
chr8 (244-302)||(39132755-39132813)
chr8 (244-297)||(355196-355249)
chr8 (244-297)||(355976-356029)
chr8 (244-297)||(5794603-5794656)
chr8 (244-297)||(11856034-11856087)
chr8 (244-297)||(12383096-12383149)
chr8 (244-297)||(14053210-14053263)
chr8 (244-297)||(14053989-14054042)
chr8 (244-297)||(15211566-15211619)
chr8 (244-297)||(17733943-17733996)
chr8 (244-297)||(18809591-18809644)
chr8 (244-297)||(20831812-20831864)
chr8 (244-297)||(24573294-24573347)
chr8 (244-297)||(28776022-28776075)
chr8 (244-297)||(29100646-29100699)
chr8 (244-297)||(31127697-31127750)
chr8 (244-297)||(32989155-32989208)
chr8 (244-297)||(37747194-37747247)
chr8 (244-297)||(43284982-43285035)
chr8 (244-297)||(43433702-43433755)
chr8 (244-297)||(44444830-44444883)
chr8 (245-297)||(26431601-26431653)
chr8 (245-297)||(29119892-29119944)
chr8 (245-297)||(32989937-32989989)
chr8 (245-297)||(43432923-43432975)
[»] chr2 (27 HSPs)
chr2 (245-297)||(4356723-4356775)
chr2 (244-302)||(22487154-22487212)
chr2 (244-297)||(7777482-7777535)
chr2 (244-300)||(3106170-3106226)
chr2 (245-297)||(3435199-3435251)
chr2 (245-297)||(20463712-20463764)
chr2 (245-297)||(40650773-40650825)
chr2 (244-297)||(122281-122334)
chr2 (244-297)||(5439077-5439130)
chr2 (244-297)||(5440116-5440169)
chr2 (244-297)||(6166983-6167036)
chr2 (244-297)||(9707889-9707942)
chr2 (244-297)||(12177950-12178003)
chr2 (244-297)||(16057293-16057346)
chr2 (244-297)||(17816251-17816304)
chr2 (244-297)||(19223667-19223720)
chr2 (244-297)||(22482108-22482161)
chr2 (244-297)||(33869647-33869700)
chr2 (247-296)||(35058207-35058256)
chr2 (244-297)||(36566219-36566272)
chr2 (244-297)||(37224478-37224531)
chr2 (244-297)||(41727139-41727192)
chr2 (244-297)||(42793815-42793868)
chr2 (244-297)||(44258008-44258061)
chr2 (245-297)||(9708993-9709045)
chr2 (245-297)||(25992629-25992681)
chr2 (245-297)||(44258703-44258755)
[»] scaffold0498 (1 HSPs)
scaffold0498 (244-297)||(11371-11424)
[»] scaffold0343 (1 HSPs)
scaffold0343 (244-297)||(10149-10202)
[»] chr7 (37 HSPs)
chr7 (244-297)||(18928105-18928158)
chr7 (244-297)||(24212327-24212380)
chr7 (244-297)||(26303305-26303358)
chr7 (244-297)||(37231455-37231508)
chr7 (244-297)||(38170923-38170976)
chr7 (244-297)||(39402804-39402857)
chr7 (244-297)||(40667946-40667999)
chr7 (244-297)||(47170206-47170259)
chr7 (247-297)||(21175986-21176036)
chr7 (247-297)||(37007080-37007130)
chr7 (244-297)||(3627958-3628011)
chr7 (244-297)||(5668267-5668320)
chr7 (244-297)||(8640920-8640973)
chr7 (245-302)||(9491252-9491309)
chr7 (247-304)||(15753334-15753391)
chr7 (244-297)||(16083001-16083054)
chr7 (244-297)||(17271804-17271857)
chr7 (244-297)||(17272586-17272639)
chr7 (244-297)||(17775332-17775385)
chr7 (244-297)||(19495892-19495945)
chr7 (244-297)||(24181897-24181950)
chr7 (244-297)||(30890234-30890287)
chr7 (244-297)||(33697369-33697422)
chr7 (244-297)||(34959178-34959231)
chr7 (244-297)||(35500638-35500691)
chr7 (244-297)||(36644054-36644107)
chr7 (244-297)||(38353992-38354045)
chr7 (244-297)||(39628396-39628449)
chr7 (244-297)||(43082185-43082238)
chr7 (244-297)||(45154931-45154984)
chr7 (245-297)||(5198248-5198300)
chr7 (244-296)||(14102837-14102889)
chr7 (244-296)||(14412854-14412906)
chr7 (245-297)||(22113892-22113944)
chr7 (245-297)||(36786663-36786715)
chr7 (245-297)||(40341230-40341282)
chr7 (245-297)||(40525497-40525549)
[»] chr6 (18 HSPs)
chr6 (244-297)||(22505003-22505056)
chr6 (244-297)||(23767778-23767831)
chr6 (244-297)||(748654-748706)
chr6 (244-297)||(749425-749478)
chr6 (247-304)||(1562920-1562977)
chr6 (244-297)||(8940169-8940222)
chr6 (244-297)||(13209099-13209152)
chr6 (244-297)||(14394694-14394747)
chr6 (244-297)||(15146580-15146633)
chr6 (244-297)||(20857515-20857568)
chr6 (244-297)||(25404097-25404150)
chr6 (244-297)||(26610460-26610513)
chr6 (244-297)||(32628686-32628739)
chr6 (245-297)||(1155411-1155463)
chr6 (245-297)||(2317713-2317765)
chr6 (247-303)||(8748734-8748790)
chr6 (245-297)||(15145799-15145851)
chr6 (245-297)||(17994078-17994130)
[»] scaffold0608 (1 HSPs)
scaffold0608 (244-297)||(1733-1786)
[»] scaffold0320 (1 HSPs)
scaffold0320 (244-297)||(16273-16326)
[»] scaffold0057 (1 HSPs)
scaffold0057 (244-297)||(76973-77026)
[»] scaffold0036 (2 HSPs)
scaffold0036 (244-297)||(12313-12366)
scaffold0036 (244-297)||(13096-13149)
[»] scaffold0022 (1 HSPs)
scaffold0022 (247-296)||(120652-120701)
[»] scaffold0008 (1 HSPs)
scaffold0008 (244-297)||(239184-239237)
[»] scaffold0001 (1 HSPs)
scaffold0001 (244-297)||(185619-185672)
[»] scaffold0945 (1 HSPs)
scaffold0945 (245-297)||(1186-1238)


Alignment Details
Target: chr5 (Bit Score: 142; Significance: 2e-74; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 2610545 - 2610396
Alignment:
Q  22 tcagaactcagaagaatcaattaaaacaaagtccgaagaagaagcggaaatggaaattataaaattcccgaactttctcaactcaaaatatatccgccac 121  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2610545 tcagaactcagaagaatcaatgaaaacaaagtccgaagaagaagcggaaatggaaattacaaaattcccgaactttctcaactcaaaatatatccgccac 2610446  T
Q  122 gtgtacaacagatggcgtaatctagccaaatatctttcaatttttctatt 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2610445 gtgtacaacagatggcgtaatctagccaaatatctttcaatttttctatt 2610396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 38396231 - 38396178
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||| ||||||| || | |||||||||||| ||||||||    
T  38396231 ctgaaattgtaagtttcatcgattacccccctgaaattaacaaaacttcaatta 38396178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 39761426 - 39761373
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  39761426 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 39761373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 41411819 - 41411872
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||  | |||||||||||||||||||||    
T  41411819 ctgaaattgtaagtttcatcaattacctctctgaaattaacaaaatttcaatta 41411872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 4843684 - 4843736
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  4843684 tgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 4843736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 36810832 - 36810884
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| | || |||||||||||||||||||||    
T  36810832 tgaaattgtaagtttcatcaattaccccattgaaattaacaaaatttcaatta 36810884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 12736296 - 12736350
Alignment:
Q  243 actgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||| ||||||| |  | |||||||||||| ||||||||    
T  12736296 actgaaattgtaagtttcatcgattacccctctgaaattaacaaaacttcaatta 12736350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 42341148 - 42341206
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||||||  |||||| || | |||||||||||| |||||||| ||||    
T  42341148 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccctc 42341206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 459491 - 459544
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  459491 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 459544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 4912613 - 4912560
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  4912613 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 4912560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 5575130 - 5575077
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  5575130 ctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 5575077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 6844963 - 6845016
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  6844963 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 6845016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 8407403 - 8407456
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  8407403 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 8407456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 9475201 - 9475254
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  9475201 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 9475254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 11445916 - 11445863
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  11445916 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 11445863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 12403581 - 12403634
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  12403581 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 12403634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 12799121 - 12799174
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||| ||||||| |  | |||||||||||| ||||||||    
T  12799121 ctgaaattgtaagtttcatcgattacccctctgaaattaacaaaacttcaatta 12799174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 13306355 - 13306408
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | || ||||||||| ||||||||    
T  13306355 ctgaaattgtaagtttcatcaattacctccctgaagttaacaaaacttcaatta 13306408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 17526913 - 17526860
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  17526913 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 17526860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 21639933 - 21639986
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  21639933 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 21639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 26395410 - 26395463
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| | || |||||||||||| ||||||||    
T  26395410 ctgaaattgtaagtttcatcaattacccctttgaaattaacaaaacttcaatta 26395463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 27257041 - 27257094
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| | || || ||||||||||||||||||    
T  27257041 ctgaaattgtaagtttcatcaattacccctttgaagttaacaaaatttcaatta 27257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 32273214 - 32273161
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||  ||| |||||||||||| ||||||||    
T  32273214 ctgaaattgtaagtttcatcaattaccctcttgaaattaacaaaacttcaatta 32273161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 38465924 - 38465871
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  38465924 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 38465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 38482976 - 38483029
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  38482976 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 38483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 39048550 - 39048497
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  39048550 ctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 39048497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 39406080 - 39406133
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  39406080 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 39406133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 39760591 - 39760644
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  39760591 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 39760644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 40459499 - 40459552
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  40459499 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 40459552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 1830252 - 1830200
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  ||||||||  | |||||||||||| ||||||||    
T  1830252 tgaaattgtaagtttcatcaattacctctctgaaattaacaaaacttcaatta 1830200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 17587256 - 17587308
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  ||||||||| | |||||||||||| || |||||    
T  17587256 tgaaattgtaagtttcatcaattacctccctaaaattaacaaaactttaatta 17587308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 25481868 - 25481919
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||| |||| ||||||| ||| |||||||||||| ||||||||    
T  25481868 tgaaattgtaagttacattaattacct-cttgaaattaacaaaacttcaatta 25481919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 38395404 - 38395456
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  38395404 tgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 38395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 40196074 - 40196022
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||| ||||||||||  ||||||||| | |||||||||||| ||||||||    
T  40196074 tgaaattataagtttcatcaattacctccctaaaattaacaaaacttcaatta 40196022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 40315719 - 40315667
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  ||||||||  | |||||||||||| ||||||||    
T  40315719 tgaaattgtaagtttcatcaattacctctctgaaattaacaaaacttcaatta 40315667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 40131037 - 40131088
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatt 296  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  40131037 tgaaattgtaagtttcattaattacctccttgaaattaacaaaatttcaatt 40131088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 1194955 - 1195008
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| ||||||||    
T  1194955 ctgaaattgtaagtttcatcaattacctccttgaaattaacaaaacttcaatta 1195008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 13994586 - 13994533
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||||||||||||    
T  13994586 ctgaaattgtaagtttcatcaattacctccctgaaattaacaaaatttcaatta 13994533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 6259064 - 6259117
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||| |||||| || | |||||||||||| ||||||||    
T  6259064 ctgaaattgtaagtttcattaattacccccctgaaattaacaaaacttcaatta 6259117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 18436409 - 18436461
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||||||||||||    
T  18436409 ctgaaattgtaagtttcatcaattacctcc-tgaaattaacaaaatttcaatta 18436461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 26477178 - 26477125
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||| ||||||||    
T  26477178 ctgaaattgtaagtttcatcaattaccttcttgaaattaacaaaacttcaatta 26477125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 34825522 - 34825469
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  34825522 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 34825469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 55602060 - 55602007
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||| |||||||   | |||||||||||||||||||||    
T  55602060 ctgaaattgtaagtttcattaattacctttctgaaattaacaaaatttcaatta 55602007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 40132610 - 40132558
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  40132610 tgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 40132558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 22731910 - 22731859
Alignment:
Q  246 gaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  22731910 gaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 22731859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 6644999 - 6644949
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaa 294  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||| |||||    
T  6644999 ctgaaattgtaagtttcgtcaattacctccttgaaattaacaaaacttcaa 6644949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 32859946 - 32860004
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||||||  |||||| || | |||||||||||| |||||||| ||||    
T  32859946 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccctc 32860004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 3886229 - 3886177
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  3886229 ctgaaattgtaagtttcatcaattacc-ccttgaaattaacaaaacttcaatta 3886177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 6194142 - 6194195
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  6194142 ctgaaattgtaagtttcatcaattaccaccctgaaattaacaaaacttcaatta 6194195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 13993748 - 13993801
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  13993748 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 13993801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 18436718 - 18436665
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  18436718 ctgaaattgtaagtttcatcaattacccccgtgaaattaacaaaacttcaatta 18436665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 22525354 - 22525301
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  ||||||||| | |||||||||||| ||||||||    
T  22525354 ctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaatta 22525301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 23466463 - 23466410
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||||  || |||||||||||| ||||||||    
T  23466463 ctgaaattgtaagtttcatcaattacctttttgaaattaacaaaacttcaatta 23466410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 28256005 - 28255952
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  28256005 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 28255952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 29245450 - 29245503
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||| | | ||||||||||||||| |||||    
T  29245450 ctgaaattgtaagtttcatcaattaccttcctgaaattaacaaaatttaaatta 29245503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 30357333 - 30357280
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  30357333 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 30357280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 33821107 - 33821160
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| || |||||    
T  33821107 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaactttaatta 33821160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 36928537 - 36928484
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  ||||||||| | |||||||||||| ||||||||    
T  36928537 ctgaaattgtaagtttcgtcaattacctccctaaaattaacaaaacttcaatta 36928484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 37998858 - 37998805
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||| | || | |||||||||||||||||||||    
T  37998858 ctgaaattgtaagtttcatcaattatccccctgaaattaacaaaatttcaatta 37998805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 41744968 - 41744915
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||| || || |||||||||||| ||||||||    
T  41744968 ctgaaattgtaagtttcatcaattacttctttgaaattaacaaaacttcaatta 41744915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 41790272 - 41790219
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||  ||| |||||||||||| ||||||||    
T  41790272 ctgaaattgtaagtttcatcaattaccctcttgaaattaacaaaacttcaatta 41790219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 41903995 - 41904048
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| || |||||| || | |||||||||||| ||||||||    
T  41903995 ctgaaattgtaagtttcgttaattacccccctgaaattaacaaaacttcaatta 41904048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 45895387 - 45895440
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  45895387 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 45895440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 50181273 - 50181326
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||| | || | |||||||||||||||||||||    
T  50181273 ctgaaattgtaagtttcatcaattatccccctgaaattaacaaaatttcaatta 50181326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 50182109 - 50182056
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  50182109 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 50182056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 28255170 - 28255222
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  28255170 tgaaattgtaagtttcatcaattaccaccctgaaattaacaaaacttcaatta 28255222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 42591932 - 42591984
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||| |||| | |||||||||||| ||||||||    
T  42591932 tgaaattgtaagtttcatcaattatctccatgaaattaacaaaacttcaatta 42591984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 53572754 - 53572798
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaa 288  Q
    |||||||||||||||||||  |||||||| || ||||||||||||    
T  53572754 ctgaaattgtaagtttcatcaattacctcattgaaattaacaaaa 53572798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 53627201 - 53627261
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctctt 304  Q
    |||||||||||||||||||  |||||||| || ||||||||||||||||||||| ||||||    
T  53627201 ctgaaattgtaagtttcatcaattacctctttgaaattaacaaaatttcaattatcctctt 53627261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 883397 - 883448
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaat 295  Q
    |||||||||||||||||||  |||||| |||| |||||||||||||||||||    
T  883397 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaatttcaat 883448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 38598890 - 38598940
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||  ||||||||||| |||||||||||| ||||||||    
T  38598890 aaattgtaagtttcatcaattacctccttgaaattaacaaaacttcaatta 38598940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 23323229 - 23323282
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||||||||||||    
T  23323229 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaatta 23323282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 40782674 - 40782727
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||||| || |||||||||||| ||||||||    
T  40782674 ctgaaattgtaagtttcatcaattacctctttgaaattaacaaaacttcaatta 40782727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 45078354 - 45078407
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||| ||||||| || | |||||||||||| ||||||||    
T  45078354 ctgaaattgtaagtttcatcgattacccccctgaaattaacaaaacttcaatta 45078407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 9717935 - 9717993
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||||||  ||||||| | | |||||||||||| |||||||| ||||    
T  9717935 ctgaaattgtaagtttcatcaattacctacctgaaattaacaaaacttcaattaccctc 9717993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 10120760 - 10120702
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||||||  |||||| || | |||||||||||| |||||||| ||||    
T  10120760 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccctc 10120702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 19961534 - 19961592
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||| |||||||| ||||    
T  19961534 ctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattaccctc 19961592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 52961743 - 52961693
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  52961743 aaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 52961693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 10435435 - 10435488
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  10435435 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 10435488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 11653887 - 11653834
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  11653887 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 11653834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 13342451 - 13342398
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  13342451 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 13342398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 13737817 - 13737764
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||| | | |||||||||||| ||||||||    
T  13737817 ctgaaattgtaagtttcatcaattaccttcctgaaattaacaaaacttcaatta 13737764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 23336831 - 23336779
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttc-aaattaacaaaatttcaatta 297  Q
    |||||||||||||||| || |||||| ||||| |||||||||||||||||||||    
T  23336831 tgaaattgtaagtttcgttaattacc-ccttcgaaattaacaaaatttcaatta 23336779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 23581744 - 23581797
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  23581744 ctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaatta 23581797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 24086114 - 24086167
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||  |||| |||||||||||| ||||||||    
T  24086114 ctgaaattgtaagtttcatcaattactcccttgaaattaacaaaacttcaatta 24086167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 25068407 - 25068354
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  25068407 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 25068354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 33305174 - 33305227
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  33305174 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 33305227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 34940938 - 34940995
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    ||||||||||||||||||  |||| | |||| |||||||||||| |||||||| ||||    
T  34940938 tgaaattgtaagtttcatcaattatccccttgaaattaacaaaacttcaattaccctc 34940995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 34941768 - 34941715
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  34941768 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 34941715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 36791828 - 36791775
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  36791828 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 36791775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 39172589 - 39172536
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  39172589 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 39172536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 40066656 - 40066603
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  40066656 ctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 40066603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 40163060 - 40163112
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||| ||||| |||||||||||| ||||||||    
T  40163060 ctgaaattgtaagtttcatcaattac-tccttgaaattaacaaaacttcaatta 40163112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 42856869 - 42856816
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | ||||||| |||| ||||||||    
T  42856869 ctgaaattgtaagtttcatcaattacctccctgaaattaataaaacttcaatta 42856816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 46651243 - 46651190
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  46651243 ctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 46651190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 49256505 - 49256452
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  49256505 ctgaaattgtaagtttcatcaattacccccatgaaattaacaaaacttcaatta 49256452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 20495327 - 20495378
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||| |||||  |||||||||||||||||||||    
T  20495327 tgaaattgtaagtttcatcaattatctcctg-aaattaacaaaatttcaatta 20495378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 23324064 - 23324012
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| ||||||||||||  |||||||    
T  23324064 tgaaattgtaagtttcatcaattacccccttgaaattaacaaaacatcaatta 23324012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 36259392 - 36259444
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||| ||  ||||||||||| ||||||| |||| ||||||||    
T  36259392 tgaaattgtaagttttatcaattacctccttgaaattaataaaacttcaatta 36259444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 43727878 - 43727826
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatt 296  Q
    |||||||||||||||||||  ||||||  | | ||||||||||||||||||||    
T  43727878 ctgaaattgtaagtttcatcaattacccacctgaaattaacaaaatttcaatt 43727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 50672690 - 50672638
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| |  |||||| || | |||||||||||||||||||||    
T  50672690 tgaaattgtaagtttcgtcaattacccccctgaaattaacaaaatttcaatta 50672638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 52170952 - 52171004
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  52170952 tgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 52171004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 29674318 - 29674377
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctct 303  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| |||||||| |||||    
T  29674318 ctgaaattgtaagtttcatcaattacctccttgaaattaacaaaacttcaattaccctct 29674377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 4470311 - 4470259
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| |||||||||||||||||||||    
T  4470311 tgaaattgtaagtttcatcaattacccccttgaaattaacaaaatttcaatta 4470259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 29330146 - 29330093
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  29330146 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 29330093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 30751150 - 30751203
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||| ||||||||||  ||||||||| | |||||||||||||||||||||    
T  30751150 ctgaaattataagtttcatcaattacctccctgaaattaacaaaatttcaatta 30751203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 30752961 - 30753014
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||| ||||||||||  ||||||||| | |||||||||||||||||||||    
T  30752961 ctgaaattataagtttcatcaattacctccctgaaattaacaaaatttcaatta 30753014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 35894087 - 35894140
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  35894087 ctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaatta 35894140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 51619431 - 51619484
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||||||||||||    
T  51619431 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaatta 51619484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 11992841 - 11992789
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  11992841 tgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaatta 11992789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 13158904 - 13158852
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  13158904 tgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 13158852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 22776252 - 22776200
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| || | |||||||||||||||||||||    
T  22776252 tgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaatta 22776200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 28437966 - 28437914
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||| |||||||  |||||| |||| |||||||||||||||||||||    
T  28437966 tgaaattgtaggtttcatcaattacccccttgaaattaacaaaatttcaatta 28437914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 38456598 - 38456648
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  38456598 aaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 38456648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 3898516 - 3898463
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  3898516 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 3898463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 8384210 - 8384157
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  8384210 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 8384157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 11201920 - 11201973
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  11201920 ctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 11201973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 18054548 - 18054495
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  18054548 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 18054495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 20898536 - 20898589
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  20898536 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 20898589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 20899370 - 20899317
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  20899370 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 20899317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 24253192 - 24253139
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| ||||||||||||| |||||||    
T  24253192 ctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaatta 24253139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 24982667 - 24982720
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  24982667 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 24982720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 25859691 - 25859638
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  25859691 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 25859638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 27234254 - 27234307
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  ||||||||| | |||||||||||| ||||||||    
T  27234254 ctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaatta 27234307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 28297386 - 28297333
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| ||||||||||||| |||||||    
T  28297386 ctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaatta 28297333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 29329312 - 29329365
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| | || |||||||||||| ||||||||    
T  29329312 ctgaaattgtaagtttcatcaattacccctttgaaattaacaaaacttcaatta 29329365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 29358467 - 29358414
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  29358467 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 29358414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 32074775 - 32074723
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||| ||||||||    
T  32074775 ctgaaattgtaagtttcatcaattacct-cttgaaattaacaaaacttcaatta 32074723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 32815158 - 32815105
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  32815158 ctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 32815105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 36723306 - 36723358
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||||||||||||    
T  36723306 ctgaaattgtaagtttcgtcaattacc-ccttgaaattaacaaaatttcaatta 36723358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 37587020 - 37587073
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||  |||| |||||||||||| ||||||||    
T  37587020 ctgaaattgtaagtttcatcaattactcccttgaaattaacaaaacttcaatta 37587073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 37612853 - 37612906
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  37612853 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 37612906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 37613687 - 37613634
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||| | |||| |||||||||||| ||||||||    
T  37613687 ctgaaattgtaagtttcatcaattatccccttgaaattaacaaaacttcaatta 37613634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 38457429 - 38457376
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||| |||||||||||  |||||| |||| |||||||||||| ||||||||    
T  38457429 ctgaaatggtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 38457376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 38618032 - 38617979
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||  ||| |||||||||||| ||||||||    
T  38618032 ctgaaattgtaagtttcatcaattaccctcttgaaattaacaaaacttcaatta 38617979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 43680386 - 43680439
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  43680386 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 43680439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 52869680 - 52869733
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| ||||||||||||| |||||||    
T  52869680 ctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaatta 52869733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 22775463 - 22775519
Alignment:
Q  246 gaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||||  ||||| ||  | ||||||||||||||||||||| ||||    
T  22775463 gaaattgtaagtttcatcaattacttctctgaaattaacaaaatttcaattaccctc 22775519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 31676496 - 31676444
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  31676496 tgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 31676444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 42247010 - 42246958
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |  | |||||||||||||||||||||    
T  42247010 tgaaattgtaagtttcatcaattacccctctgaaattaacaaaatttcaatta 42246958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 44396488 - 44396540
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  44396488 tgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 44396540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 49596001 - 49596053
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||| ||||| |  ||||||||||| |||||||||||| ||||||||    
T  49596001 tgaaattgtaggtttcgtcaattacctccttgaaattaacaaaacttcaatta 49596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 1854 - 1907
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||    
T  1854 ctgaaattgtaagtttcatcgattacccccttgaaattaacaaaacttcaatta 1907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 104573 - 104520
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| ||||||||    
T  104573 ctgaaattgtaagtttcatcaattacctccttgaaattaacaaaacttcaatta 104520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 2657669 - 2657616
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| ||||||||    
T  2657669 ctgaaattgtaagtttcatcaattacctccttgaaattaacaaaacttcaatta 2657616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 10443080 - 10443133
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  10443080 ctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaatta 10443133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 28776858 - 28776805
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||| ||||||||    
T  28776858 ctgaaattgtaagtttcatcaattaccttcttgaaattaacaaaacttcaatta 28776805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 11650770 - 11650822
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||| |||  ||||||||||| |||||||||||| ||||||||    
T  11650770 tgaaattgtaagttccatcaattacctccttgaaattaacaaaacttcaatta 11650822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 31918656 - 31918604
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatt 296  Q
    |||||||||||||||||||  ||||||||| | |||||||||||| |||||||    
T  31918656 ctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaatt 31918604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 9737221 - 9737171
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaa 294  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| |||||    
T  9737221 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaa 9737171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 11651539 - 11651481
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||| ||| |||||| || | |||||||||||| |||||||| ||||    
T  11651539 ctgaaattgtaagtttaattaattacccccctgaaattaacaaaacttcaattaccctc 11651481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 39132755 - 39132813
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||||||  |||||| || | |||||||||||| |||||||| ||||    
T  39132755 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccctc 39132813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 355196 - 355249
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  355196 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 355249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 356029 - 355976
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  356029 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 355976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 5794603 - 5794656
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||  | | |||||||||||||||||||||    
T  5794603 ctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaatttcaatta 5794656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 11856034 - 11856087
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||| | || | |||||||||||||||||||||    
T  11856034 ctgaaattgtaagtttcatcaattatccccctgaaattaacaaaatttcaatta 11856087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 12383096 - 12383149
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  12383096 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 12383149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 14053210 - 14053263
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||  | | |||||||||||||||||||||    
T  14053210 ctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaatttcaatta 14053263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 14054042 - 14053989
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  14054042 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 14053989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 15211619 - 15211566
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||| | | |||||||||||| ||||||||    
T  15211619 ctgaaattgtaagtttcatcaattaccttcctgaaattaacaaaacttcaatta 15211566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 17733996 - 17733943
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||  |  ||||||||||| |||||||||||| ||||||||    
T  17733996 ctgaaattgtaagttttgtcaattacctccttgaaattaacaaaacttcaatta 17733943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 18809591 - 18809644
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  18809591 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 18809644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 20831812 - 20831864
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  20831812 ctgaaattgtaagtttcatcaattacctcc-tgaaattaacaaaacttcaatta 20831864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 24573294 - 24573347
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||| | |||| |||||||||||| ||||||||    
T  24573294 ctgaaattgtaagtttcatcaattatccccttaaaattaacaaaacttcaatta 24573347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 28776022 - 28776075
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  28776022 ctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaatta 28776075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 29100646 - 29100699
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  29100646 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 29100699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 31127750 - 31127697
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  31127750 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 31127697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 32989155 - 32989208
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| ||  ||||||||| | |||||||||||| ||||||||    
T  32989155 ctgaaattgtaagttttatcaattacctccctgaaattaacaaaacttcaatta 32989208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 37747247 - 37747194
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  37747247 ctgaaattgtaagtttcgtaaattacccccttgaaattaacaaaacttcaatta 37747194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 43285035 - 43284982
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||  | | |||||||||||||||||||||    
T  43285035 ctgaaattgtaagtttcatcaattaccctcatgaaattaacaaaatttcaatta 43284982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 43433755 - 43433702
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  43433755 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 43433702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 44444830 - 44444883
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  ||||||||| | ||||||||||||| |||||||    
T  44444830 ctgaaattgtaagtttcgtcaattacctccataaaattaacaaaatgtcaatta 44444883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 26431653 - 26431601
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| |  |||| ||| || |||||||||||||||||||||    
T  26431653 tgaaattgtaagtttcgtcaattatctctttgaaattaacaaaatttcaatta 26431601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 29119944 - 29119892
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||| | | || |||||||||||||||||||||    
T  29119944 tgaaattgtaagtttcatcaattatccctttgaaattaacaaaatttcaatta 29119892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 32989989 - 32989937
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  ||||| ||| | |||||||||||| ||||||||    
T  32989989 tgaaattgtaagtttcatcaattacttccctgaaattaacaaaacttcaatta 32989937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 43432923 - 43432975
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| | || |||||||||||| ||||||||    
T  43432923 tgaaattgtaagtttcatcaattacccctttgaaattaacaaaacttcaatta 43432975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 4356723 - 4356775
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| |||||||||||||||||||||    
T  4356723 tgaaattgtaagtttcatcaattacccccttgaaattaacaaaatttcaatta 4356775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 22487154 - 22487212
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| |||||||| ||||    
T  22487154 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaattatcctc 22487212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 7777482 - 7777535
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||| ||||||||    
T  7777482 ctgaaattgtaagtttcatcaattaccttcttgaaattaacaaaacttcaatta 7777535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 3106170 - 3106226
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacc 300  Q
    |||||||||||||||||||  |||||| | || |||||||||||| |||||||||||    
T  3106170 ctgaaattgtaagtttcatcaattaccccattgaaattaacaaaacttcaattaacc 3106226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 3435251 - 3435199
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  3435251 tgaaattgtaagtttcatcaattacccccttaaaattaacaaaacttcaatta 3435199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 20463764 - 20463712
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  20463764 tgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 20463712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 40650773 - 40650825
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  40650773 tgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 40650825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 122334 - 122281
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  122334 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 122281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 5439130 - 5439077
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  ||||||||| | |||||||||||| ||||||||    
T  5439130 ctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaatta 5439077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 5440116 - 5440169
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  5440116 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 5440169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 6167036 - 6166983
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  6167036 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 6166983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 9707889 - 9707942
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  9707889 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 9707942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 12177950 - 12178003
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |  | |||||||||||||||||||||    
T  12177950 ctgaaattgtaagtttcatcaattacccctctgaaattaacaaaatttcaatta 12178003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 16057293 - 16057346
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  16057293 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 16057346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 17816304 - 17816251
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| ||||||||||||| |||||||    
T  17816304 ctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaatta 17816251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 19223720 - 19223667
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  19223720 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 19223667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 22482161 - 22482108
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  22482161 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 22482108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 33869647 - 33869700
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||| | | |||||||||||| ||||||||    
T  33869647 ctgaaattgtaagtttcatcaattaccttcctgaaattaacaaaacttcaatta 33869700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 35058207 - 35058256
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatt 296  Q
    |||||||||||||| || |||||| |||| |||||||||||| |||||||    
T  35058207 aaattgtaagtttcgttaattacccccttaaaattaacaaaacttcaatt 35058256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 36566219 - 36566272
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||  ||| |||||||||||| ||||||||    
T  36566219 ctgaaattgtaagtttcatcaattaccctcttgaaattaacaaaacttcaatta 36566272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 37224478 - 37224531
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| ||  |||||| |||| |||||||||||| ||||||||    
T  37224478 ctgaaattgtaagttttatcaattacccccttgaaattaacaaaacttcaatta 37224531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 41727192 - 41727139
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  41727192 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 41727139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 42793868 - 42793815
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  42793868 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 42793815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 44258008 - 44258061
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  44258008 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 44258061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 9709045 - 9708993
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| |  |||||||| || |||||||||||| ||||||||    
T  9709045 tgaaattgtaagtttcgtcaattacctctttgaaattaacaaaacttcaatta 9708993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 25992681 - 25992629
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||| ||||||||||  ||||||||| | |||||||||||| ||||||||    
T  25992681 tgaaattttaagtttcatcaattacctccctgaaattaacaaaacttcaatta 25992629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 44258755 - 44258703
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  44258755 tgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaatta 44258703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 11424 - 11371
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  11424 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 11371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 10149 - 10202
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  10149 ctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaatta 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 18928105 - 18928158
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||||||||||||    
T  18928105 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaatta 18928158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 24212327 - 24212380
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| |||| |||||||||||||||||||||    
T  24212327 ctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaatttcaatta 24212380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 26303305 - 26303358
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  26303305 ctgaaattgtaagtttcatcaattacccccttaaaattaacaaaacttcaatta 26303358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 37231508 - 37231455
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  37231508 ctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaatta 37231455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 38170923 - 38170976
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  38170923 ctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaatta 38170976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 39402804 - 39402857
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||| |||||| | || |||||||||||| ||||||||    
T  39402804 ctgaaattgtaagtttcattaattacccctttgaaattaacaaaacttcaatta 39402857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 40667946 - 40667999
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||| ||||||| || | |||||||||||| ||||||||    
T  40667946 ctgaaattgtaagtttcatcgattacccccctgaaattaacaaaacttcaatta 40667999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 47170206 - 47170259
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||||||||||||    
T  47170206 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaatta 47170259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 21175986 - 21176036
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  21175986 aaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaatta 21176036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 37007080 - 37007130
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||  ||||| | ||| |||||||||||||||||||||    
T  37007080 aaattgtaagtttcatcaattactttcttaaaattaacaaaatttcaatta 37007130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 3627958 - 3628011
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  3627958 ctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaatta 3628011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 5668267 - 5668320
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  5668267 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 5668320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 8640920 - 8640973
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  8640920 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 8640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 9491252 - 9491309
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctc 302  Q
    |||||||||||||||  || |||||| |||| |||||||||||| |||||||| ||||    
T  9491252 tgaaattgtaagttttgttaattacccccttgaaattaacaaaacttcaattaccctc 9491309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 15753391 - 15753334
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctctt 304  Q
    |||||||||||||| || |||||||| |  |||||||||||| |||||||| ||||||    
T  15753391 aaattgtaagtttcgttaattacctcttcgaaattaacaaaacttcaattaccctctt 15753334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 16083001 - 16083054
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||| |||||||  ||||||||| | |||||||||||| ||||||||    
T  16083001 ctgaaattgtaggtttcatcaattacctccctgaaattaacaaaacttcaatta 16083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 17271804 - 17271857
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  17271804 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 17271857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 17272639 - 17272586
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||  | |||||||||||| ||||||||    
T  17272639 ctgaaattgtaagtttcatcaattacctctctgaaattaacaaaacttcaatta 17272586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 17775385 - 17775332
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||||| || |||||||||||| ||||||||    
T  17775385 ctgaaattgtaagtttcgtcaattacctctttgaaattaacaaaacttcaatta 17775332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 19495945 - 19495892
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  19495945 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 19495892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 24181897 - 24181950
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  24181897 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 24181950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 30890234 - 30890287
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||||| || || ||||||||| ||||||||    
T  30890234 ctgaaattgtaagtttcatcaattacctctttgaagttaacaaaacttcaatta 30890287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 33697422 - 33697369
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  |||||| || | |||||||||||||||||||||    
T  33697422 ctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaatttcaatta 33697369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 34959231 - 34959178
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| |  ||||||||| | |||||||||||| ||||||||    
T  34959231 ctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaatta 34959178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 35500691 - 35500638
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  35500691 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 35500638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 36644054 - 36644107
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||  | |||||||||||| ||||||||    
T  36644054 ctgaaattgtaagtttcatcaattacctcactaaaattaacaaaacttcaatta 36644107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 38353992 - 38354045
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| | || |||||||||||| ||||||||    
T  38353992 ctgaaattgtaagtttcatcaattaccccattgaaattaacaaaacttcaatta 38354045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 39628396 - 39628449
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  39628396 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 39628449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 43082185 - 43082238
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  43082185 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 43082238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 45154931 - 45154984
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  45154931 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 45154984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 5198248 - 5198300
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| || || |||  ||| |||||||||||||||||||||    
T  5198248 tgaaattgtaagtttcgttaatcaccctcttgaaattaacaaaatttcaatta 5198300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 14102837 - 14102889
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatt 296  Q
    |||||||||||||||||||  |||||| || | |||||||||||| |||||||    
T  14102837 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatt 14102889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 14412854 - 14412906
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatt 296  Q
    |||||||||||||||||||  |||||| || | |||||||||||| |||||||    
T  14412854 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatt 14412906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 22113892 - 22113944
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| |  |||||| | || |||||||||||||||||||||    
T  22113892 tgaaattgtaagtttcgtcaattaccactttgaaattaacaaaatttcaatta 22113944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 36786663 - 36786715
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||||   | |||||||||||||||||||||    
T  36786663 tgaaattgtaagtttcatcaattacctttctgaaattaacaaaatttcaatta 36786715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 40341282 - 40341230
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| | || |||||||||||| ||||||||    
T  40341282 tgaaattgtaagtttcatcaattacccctttgaaattaacaaaacttcaatta 40341230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 40525549 - 40525497
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| |  |||||| | || |||||||||||||||||||||    
T  40525549 tgaaattgtaagtttcgtcaattaccactttgaaattaacaaaatttcaatta 40525497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 22505056 - 22505003
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  22505056 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 22505003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 23767831 - 23767778
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  23767831 ctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatta 23767778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 748654 - 748706
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  ||||||||| | |||||||||||| ||||||||    
T  748654 ctgaaattgtaagtttcatcaattacctcc-tgaaattaacaaaacttcaatta 748706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 749478 - 749425
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  749478 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 749425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 1562920 - 1562977
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctctt 304  Q
    |||||||||||||| || |||||||| |  |||||||||||| |||||||| ||||||    
T  1562920 aaattgtaagtttcgttaattacctcttcgaaattaacaaaacttcaattaccctctt 1562977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 8940222 - 8940169
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  8940222 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 8940169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 13209099 - 13209152
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  13209099 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 13209152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 14394694 - 14394747
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  14394694 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 14394747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 15146633 - 15146580
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  15146633 ctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaatta 15146580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 20857568 - 20857515
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| | || |||||||||||| ||||||||    
T  20857568 ctgaaattgtaagtttcatcaattacccctttgaaattaacaaaacttcaatta 20857515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 25404097 - 25404150
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  25404097 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 25404150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 26610513 - 26610460
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  26610513 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 26610460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 32628739 - 32628686
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  32628739 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 32628686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 1155463 - 1155411
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  ||||||||| | |||| ||||||| ||||||||    
T  1155463 tgaaattgtaagtttcatcaattacctccctgaaatgaacaaaacttcaatta 1155411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 2317713 - 2317765
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  2317713 tgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 2317765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 8748734 - 8748790
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaattaacctct 303  Q
    ||||||||||||||||  |||||| || | |||||||||||| |||||||| |||||    
T  8748734 aaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccctct 8748790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 15145799 - 15145851
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||||  ||||||  | | |||||||||||||||||||||    
T  15145799 tgaaattgtaagtttcatcaattaccctcatgaaattaacaaaatttcaatta 15145851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 17994078 - 17994130
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| |  |||||||| || |||||||||||| ||||||||    
T  17994078 tgaaattgtaagtttcttcaattacctctttgaaattaacaaaacttcaatta 17994130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 1733 - 1786
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||| | || | |||||||||||||||||||||    
T  1733 ctgaaattgtaagtttcatcaattatccccctgaaattaacaaaatttcaatta 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 16326 - 16273
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  16326 ctgaaattgtaagtttcatcaattacccccatgaaattaacaaaacttcaatta 16273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 76973 - 77026
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| |  | |||||||||||||||||||||    
T  76973 ctgaaattgtaagtttcatcaattacccctctgaaattaacaaaatttcaatta 77026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 12313 - 12366
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  12313 ctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaatta 12366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 13149 - 13096
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  13149 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 13096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 120652 - 120701
Alignment:
Q  247 aaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatt 296  Q
    ||||||||||||||||  |||||| |||| |||||||||||| |||||||    
T  120652 aaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaatt 120701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 239184 - 239237
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    ||||||||||||||||| || |||||| || | |||||||||||| ||||||||    
T  239184 ctgaaattgtaagtttcgttaattacccccctgaaattaacaaaacttcaatta 239237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 185619 - 185672
Alignment:
Q  244 ctgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||||||  |||||| || | |||||||||||| ||||||||    
T  185619 ctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaatta 185672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0945 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0945
Description:

Target: scaffold0945; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 1186 - 1238
Alignment:
Q  245 tgaaattgtaagtttcattgattacctccttcaaattaacaaaatttcaatta 297  Q
    |||||||||||||||| |  |||||| |||| |||||||||||| ||||||||    
T  1186 tgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 1238  T

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