View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3229_high_90 (Length: 289)

Name: NF3229_high_90
Description: NF3229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3229_high_90
NF3229_high_90
[»] chr2 (58 HSPs)
chr2 (1-116)||(7640337-7640452)
chr2 (5-116)||(25516512-25516622)
chr2 (1-111)||(43929337-43929447)
chr2 (1-117)||(3603002-3603118)
chr2 (1-116)||(3390450-3390565)
chr2 (1-116)||(25771463-25771578)
chr2 (5-114)||(27191321-27191429)
chr2 (5-114)||(27841135-27841243)
chr2 (1-116)||(5930441-5930556)
chr2 (1-116)||(27024120-27024235)
chr2 (5-116)||(43566894-43567003)
chr2 (5-116)||(6089911-6090020)
chr2 (5-116)||(44167695-44167805)
chr2 (1-116)||(26491321-26491435)
chr2 (5-116)||(36507949-36508059)
chr2 (1-87)||(16879946-16880032)
chr2 (1-87)||(16992079-16992165)
chr2 (1-115)||(41841969-41842081)
chr2 (1-116)||(42105733-42105848)
chr2 (5-94)||(38822115-38822202)
chr2 (8-116)||(3464977-3465083)
chr2 (1-116)||(29734207-29734323)
chr2 (1-116)||(25623026-25623141)
chr2 (10-116)||(29812604-29812711)
chr2 (1-116)||(40125407-40125522)
chr2 (1-95)||(9715525-9715619)
chr2 (8-117)||(19953587-19953696)
chr2 (1-116)||(10589056-10589172)
chr2 (1-105)||(11930943-11931047)
chr2 (12-95)||(15673953-15674036)
chr2 (1-116)||(37883671-37883786)
chr2 (1-116)||(19580983-19581099)
chr2 (1-95)||(7443547-7443641)
chr2 (57-131)||(11550588-11550663)
chr2 (1-116)||(25237307-25237422)
chr2 (214-273)||(33867136-33867195)
chr2 (23-95)||(41176902-41176976)
chr2 (216-273)||(667575-667632)
chr2 (217-273)||(4481511-4481567)
chr2 (217-273)||(25425211-25425267)
chr2 (54-116)||(34479974-34480036)
chr2 (54-114)||(2251379-2251439)
chr2 (1-95)||(35353682-35353776)
chr2 (54-116)||(44441404-44441466)
chr2 (1-94)||(13268613-13268705)
chr2 (217-273)||(4290104-4290160)
chr2 (217-273)||(23232190-23232246)
chr2 (217-273)||(38620846-38620902)
chr2 (218-273)||(17249292-17249347)
chr2 (52-95)||(22651994-22652037)
chr2 (218-273)||(31440239-31440294)
chr2 (61-95)||(24500558-24500592)
chr2 (2-95)||(3397961-3398054)
chr2 (220-273)||(15234478-15234531)
chr2 (217-273)||(13142173-13142229)
chr2 (217-273)||(15149826-15149882)
chr2 (217-273)||(20937513-20937569)
chr2 (55-95)||(32909088-32909128)
[»] chr4 (80 HSPs)
chr4 (1-114)||(23067829-23067942)
chr4 (1-116)||(9661871-9661986)
chr4 (1-116)||(42972056-42972171)
chr4 (1-114)||(46716875-46716988)
chr4 (1-117)||(12519673-12519789)
chr4 (1-104)||(9474520-9474623)
chr4 (8-116)||(54420701-54420808)
chr4 (1-116)||(4634301-4634416)
chr4 (1-95)||(2945176-2945270)
chr4 (8-114)||(53903630-53903735)
chr4 (1-104)||(31601339-31601443)
chr4 (5-95)||(20961490-20961578)
chr4 (1-116)||(41486593-41486708)
chr4 (2-132)||(9549467-9549599)
chr4 (15-116)||(52555716-52555817)
chr4 (1-105)||(14542493-14542597)
chr4 (1-133)||(15729962-15730095)
chr4 (1-117)||(44375245-44375361)
chr4 (1-112)||(32189004-32189113)
chr4 (1-114)||(38434618-38434732)
chr4 (1-116)||(34115632-34115748)
chr4 (1-133)||(40859650-40859779)
chr4 (1-116)||(16991890-16992005)
chr4 (1-104)||(28990328-28990431)
chr4 (1-116)||(37869398-37869513)
chr4 (20-115)||(51646112-51646207)
chr4 (1-116)||(46728901-46729015)
chr4 (217-271)||(34459218-34459272)
chr4 (1-116)||(28588579-28588695)
chr4 (15-94)||(38170154-38170233)
chr4 (1-64)||(50003157-50003220)
chr4 (1-114)||(9526320-9526433)
chr4 (1-116)||(30416602-30416718)
chr4 (1-116)||(43156795-43156909)
chr4 (1-114)||(23926061-23926174)
chr4 (1-102)||(1657547-1657648)
chr4 (220-273)||(33983604-33983657)
chr4 (217-273)||(29148603-29148659)
chr4 (217-273)||(32655106-32655162)
chr4 (217-273)||(42755808-42755864)
chr4 (217-272)||(652703-652758)
chr4 (214-273)||(14577255-14577314)
chr4 (215-273)||(12186240-12186298)
chr4 (1-87)||(44021552-44021638)
chr4 (59-116)||(1645980-1646037)
chr4 (216-273)||(2720821-2720878)
chr4 (218-271)||(52596014-52596067)
chr4 (8-116)||(6408458-6408569)
chr4 (217-273)||(42052854-42052910)
chr4 (217-273)||(52180361-52180417)
chr4 (36-95)||(29474370-29474429)
chr4 (215-273)||(12188234-12188292)
chr4 (59-116)||(3169058-3169115)
chr4 (8-105)||(46775844-46775941)
chr4 (217-273)||(1757622-1757678)
chr4 (217-273)||(3094564-3094620)
chr4 (217-273)||(3386813-3386869)
chr4 (54-114)||(3673643-3673703)
chr4 (10-116)||(4622699-4622807)
chr4 (54-114)||(5388535-5388595)
chr4 (1-81)||(7242750-7242830)
chr4 (217-273)||(25938824-25938880)
chr4 (217-273)||(28928207-28928263)
chr4 (1-104)||(33020906-33021009)
chr4 (10-102)||(35338426-35338518)
chr4 (217-273)||(52801799-52801855)
chr4 (217-273)||(53141090-53141146)
chr4 (218-273)||(2073220-2073274)
chr4 (223-273)||(21246306-21246355)
chr4 (217-271)||(46030670-46030724)
chr4 (54-95)||(1124981-1125022)
chr4 (55-116)||(11817090-11817151)
chr4 (220-273)||(21076293-21076346)
chr4 (220-273)||(23147872-23147925)
chr4 (8-84)||(23963759-23963835)
chr4 (1-86)||(36804538-36804623)
chr4 (217-273)||(8066424-8066480)
chr4 (217-273)||(22312955-22313011)
chr4 (61-105)||(46386814-46386858)
chr4 (217-273)||(54932332-54932388)
[»] chr8 (52 HSPs)
chr8 (1-111)||(41996568-41996678)
chr8 (1-117)||(32104819-32104935)
chr8 (1-116)||(9270039-9270154)
chr8 (1-106)||(8054788-8054894)
chr8 (1-112)||(36545762-36545873)
chr8 (5-116)||(16996873-16996982)
chr8 (1-116)||(31874102-31874217)
chr8 (1-116)||(9992683-9992800)
chr8 (1-105)||(44295345-44295449)
chr8 (1-116)||(5989648-5989763)
chr8 (1-116)||(32412809-32412923)
chr8 (2-111)||(5327989-5328099)
chr8 (1-116)||(32256702-32256817)
chr8 (12-116)||(3680941-3681045)
chr8 (29-116)||(16808896-16808982)
chr8 (1-116)||(16937320-16937435)
chr8 (5-100)||(31147786-31147881)
chr8 (214-273)||(1667612-1667671)
chr8 (5-95)||(37129659-37129746)
chr8 (1-116)||(37658984-37659099)
chr8 (1-95)||(10042811-10042905)
chr8 (4-114)||(15237622-15237731)
chr8 (1-114)||(7269445-7269558)
chr8 (1-114)||(7281108-7281221)
chr8 (1-114)||(11655891-11656004)
chr8 (1-102)||(13864391-13864492)
chr8 (217-273)||(2620557-2620613)
chr8 (20-116)||(15665557-15665653)
chr8 (5-52)||(5457153-5457200)
chr8 (54-116)||(2628932-2628993)
chr8 (12-114)||(16938263-16938365)
chr8 (217-271)||(25500509-25500563)
chr8 (217-273)||(6110080-6110136)
chr8 (217-273)||(19643111-19643167)
chr8 (1-117)||(26937542-26937658)
chr8 (1-114)||(1215320-1215433)
chr8 (1-116)||(12244197-12244313)
chr8 (219-273)||(24789971-24790025)
chr8 (217-273)||(3616464-3616520)
chr8 (8-116)||(5917730-5917836)
chr8 (217-273)||(24891045-24891101)
chr8 (227-273)||(2472059-2472105)
chr8 (1-47)||(14115809-14115855)
chr8 (1-47)||(17019205-17019251)
chr8 (1-47)||(17549642-17549688)
chr8 (219-271)||(7058029-7058081)
chr8 (15-114)||(32920672-32920771)
chr8 (55-102)||(23766772-23766819)
chr8 (2-81)||(37719905-37719983)
chr8 (4-73)||(6833541-6833610)
chr8 (54-95)||(7954516-7954557)
chr8 (221-273)||(30801705-30801757)
[»] chr1 (78 HSPs)
chr1 (1-116)||(23320458-23320573)
chr1 (1-116)||(44562730-44562845)
chr1 (5-133)||(1767968-1768095)
chr1 (1-114)||(5832253-5832367)
chr1 (1-115)||(21326492-21326606)
chr1 (5-116)||(4564536-4564646)
chr1 (1-116)||(22344893-22345008)
chr1 (1-114)||(630765-630879)
chr1 (1-116)||(15276431-15276546)
chr1 (5-116)||(45659060-45659171)
chr1 (1-114)||(23257108-23257221)
chr1 (8-133)||(40992332-40992462)
chr1 (5-104)||(15698230-15698329)
chr1 (1-114)||(40488378-40488491)
chr1 (1-116)||(10877364-10877479)
chr1 (8-106)||(14717230-14717329)
chr1 (1-116)||(38646602-38646717)
chr1 (1-94)||(38644778-38644871)
chr1 (12-116)||(6212878-6212982)
chr1 (20-116)||(8893311-8893407)
chr1 (1-96)||(36621390-36621485)
chr1 (1-103)||(32539171-32539273)
chr1 (2-116)||(35077872-35077986)
chr1 (15-114)||(900142-900241)
chr1 (8-117)||(33177585-33177693)
chr1 (217-273)||(19506840-19506896)
chr1 (1-93)||(52839571-52839663)
chr1 (1-104)||(29067080-29067182)
chr1 (1-116)||(52752046-52752156)
chr1 (1-94)||(33703491-33703583)
chr1 (2-95)||(44513971-44514064)
chr1 (217-273)||(2978874-2978930)
chr1 (1-105)||(12148029-12148133)
chr1 (1-81)||(27469689-27469769)
chr1 (217-273)||(28221424-28221480)
chr1 (1-116)||(49651853-49651977)
chr1 (58-116)||(17579786-17579844)
chr1 (1-94)||(22032072-22032164)
chr1 (217-273)||(9222700-9222756)
chr1 (217-273)||(13313192-13313248)
chr1 (216-263)||(2974840-2974887)
chr1 (218-265)||(21260345-21260392)
chr1 (215-273)||(25814925-25814983)
chr1 (1-98)||(2350658-2350755)
chr1 (217-273)||(27783957-27784013)
chr1 (217-273)||(32835106-32835162)
chr1 (221-273)||(38491878-38491930)
chr1 (217-273)||(42068721-42068777)
chr1 (214-273)||(29054196-29054255)
chr1 (1-87)||(37662257-37662343)
chr1 (36-116)||(37685111-37685192)
chr1 (36-116)||(37700326-37700407)
chr1 (54-101)||(48655100-48655147)
chr1 (8-82)||(13969631-13969705)
chr1 (54-103)||(30853816-30853865)
chr1 (216-269)||(43634131-43634183)
chr1 (217-273)||(2433668-2433724)
chr1 (217-273)||(4892875-4892931)
chr1 (217-273)||(20415436-20415492)
chr1 (217-273)||(25059558-25059614)
chr1 (1-116)||(28213069-28213181)
chr1 (217-273)||(29185556-29185612)
chr1 (217-273)||(33362478-33362534)
chr1 (14-117)||(46589193-46589295)
chr1 (218-273)||(236972-237027)
chr1 (82-133)||(10264761-10264812)
chr1 (12-86)||(34566736-34566810)
chr1 (54-116)||(13691792-13691854)
chr1 (215-261)||(14106782-14106828)
chr1 (54-92)||(26199635-26199672)
chr1 (217-271)||(30490119-30490173)
chr1 (216-273)||(28192035-28192092)
chr1 (216-273)||(35978102-35978159)
chr1 (217-273)||(7843012-7843068)
chr1 (217-265)||(10786665-10786713)
chr1 (1-45)||(12967713-12967757)
chr1 (3-86)||(27356744-27356827)
chr1 (217-273)||(44327527-44327582)
[»] chr7 (63 HSPs)
chr7 (1-116)||(30992804-30992919)
chr7 (1-115)||(26017639-26017753)
chr7 (1-116)||(47749752-47749867)
chr7 (5-116)||(24470413-24470523)
chr7 (1-116)||(25855201-25855316)
chr7 (1-116)||(40775285-40775400)
chr7 (1-117)||(23732374-23732490)
chr7 (1-116)||(42490720-42490836)
chr7 (1-104)||(135126-135229)
chr7 (5-112)||(8611608-8611714)
chr7 (5-116)||(24475361-24475471)
chr7 (1-116)||(43807131-43807246)
chr7 (5-115)||(49166946-49167055)
chr7 (4-114)||(35661544-35661654)
chr7 (1-106)||(13008654-13008759)
chr7 (8-115)||(37399645-37399752)
chr7 (1-115)||(9933866-9933980)
chr7 (1-95)||(43483639-43483733)
chr7 (1-106)||(7985920-7986025)
chr7 (8-116)||(39090133-39090242)
chr7 (1-115)||(15123961-15124076)
chr7 (1-115)||(22751458-22751571)
chr7 (1-115)||(44681481-44681593)
chr7 (5-102)||(40476741-40476837)
chr7 (5-93)||(47156435-47156521)
chr7 (20-104)||(19895651-19895735)
chr7 (1-95)||(8319354-8319448)
chr7 (4-115)||(35141735-35141848)
chr7 (1-116)||(5025037-5025152)
chr7 (28-116)||(10250489-10250577)
chr7 (4-116)||(23177567-23177677)
chr7 (1-116)||(28015374-28015490)
chr7 (217-273)||(33067076-33067132)
chr7 (1-115)||(35135164-35135278)
chr7 (5-105)||(11001875-11001973)
chr7 (1-116)||(38649338-38649454)
chr7 (1-114)||(29804656-29804770)
chr7 (216-273)||(12920591-12920648)
chr7 (1-94)||(46918441-46918533)
chr7 (217-273)||(43224782-43224838)
chr7 (217-273)||(43702004-43702060)
chr7 (8-116)||(41748487-41748597)
chr7 (219-273)||(46181677-46181731)
chr7 (217-273)||(16568031-16568087)
chr7 (217-273)||(16597575-16597631)
chr7 (216-272)||(31455357-31455413)
chr7 (8-116)||(33530456-33530564)
chr7 (213-273)||(36073629-36073689)
chr7 (217-273)||(39415029-39415085)
chr7 (8-114)||(21552443-21552549)
chr7 (217-273)||(9478026-9478082)
chr7 (1-81)||(14707636-14707716)
chr7 (1-116)||(16263405-16263520)
chr7 (217-273)||(17171801-17171857)
chr7 (217-273)||(42284969-42285025)
chr7 (214-273)||(35092330-35092389)
chr7 (2-80)||(772497-772575)
chr7 (220-273)||(19805490-19805543)
chr7 (217-266)||(26299904-26299953)
chr7 (217-273)||(3551135-3551191)
chr7 (54-114)||(21329330-21329390)
chr7 (217-269)||(27399057-27399109)
chr7 (217-273)||(46783532-46783588)
[»] chr6 (37 HSPs)
chr6 (1-116)||(19759806-19759921)
chr6 (1-106)||(23843405-23843510)
chr6 (1-116)||(20845026-20845141)
chr6 (1-104)||(13234089-13234192)
chr6 (5-114)||(16913348-16913457)
chr6 (1-116)||(548847-548961)
chr6 (1-116)||(32804312-32804428)
chr6 (1-116)||(15128134-15128245)
chr6 (1-116)||(32457664-32457779)
chr6 (5-114)||(12576465-12576572)
chr6 (4-117)||(7049264-7049375)
chr6 (5-104)||(8633176-8633273)
chr6 (4-106)||(31747986-31748087)
chr6 (5-105)||(11425973-11426071)
chr6 (2-117)||(1944113-1944228)
chr6 (12-115)||(8644264-8644367)
chr6 (217-273)||(7808220-7808276)
chr6 (21-116)||(891606-891701)
chr6 (9-116)||(4663809-4663916)
chr6 (1-116)||(33194623-33194738)
chr6 (12-81)||(31804301-31804370)
chr6 (23-87)||(20745047-20745111)
chr6 (20-95)||(903496-903571)
chr6 (1-116)||(10744597-10744716)
chr6 (217-273)||(28770247-28770303)
chr6 (217-273)||(33329053-33329109)
chr6 (217-273)||(33332065-33332121)
chr6 (8-95)||(12652188-12652275)
chr6 (216-273)||(31071246-31071303)
chr6 (217-273)||(1221295-1221351)
chr6 (1-45)||(5417179-5417223)
chr6 (217-273)||(24446702-24446758)
chr6 (54-114)||(33541563-33541623)
chr6 (1-83)||(5544759-5544840)
chr6 (217-271)||(13532530-13532584)
chr6 (216-273)||(6337650-6337707)
chr6 (217-273)||(1329158-1329214)
[»] scaffold0722 (1 HSPs)
scaffold0722 (1-102)||(5507-5608)
[»] chr3 (59 HSPs)
chr3 (1-116)||(1165377-1165492)
chr3 (5-116)||(14741310-14741421)
chr3 (1-116)||(43029701-43029816)
chr3 (5-133)||(47914578-47914708)
chr3 (5-116)||(3088648-3088758)
chr3 (1-116)||(21803548-21803663)
chr3 (1-116)||(29182589-29182704)
chr3 (1-106)||(43839499-43839604)
chr3 (1-116)||(20201039-20201154)
chr3 (1-116)||(20203221-20203336)
chr3 (5-116)||(41882394-41882504)
chr3 (1-133)||(29776671-29776801)
chr3 (1-116)||(35501740-35501855)
chr3 (5-115)||(22286735-22286844)
chr3 (1-115)||(25374051-25374165)
chr3 (5-105)||(28995293-28995391)
chr3 (12-116)||(33076330-33076434)
chr3 (5-95)||(33977909-33977997)
chr3 (22-116)||(50519808-50519901)
chr3 (3-132)||(39340201-39340330)
chr3 (1-70)||(54240150-54240219)
chr3 (20-116)||(2598101-2598197)
chr3 (1-116)||(20251670-20251790)
chr3 (12-104)||(32089922-32090014)
chr3 (214-273)||(11672183-11672242)
chr3 (4-116)||(34766998-34767115)
chr3 (1-116)||(40461976-40462091)
chr3 (23-117)||(26412349-26412443)
chr3 (1-116)||(22893696-22893810)
chr3 (217-273)||(5040653-5040709)
chr3 (217-273)||(25467943-25467999)
chr3 (9-116)||(53426822-53426923)
chr3 (8-83)||(21585950-21586025)
chr3 (3-94)||(36540656-36540746)
chr3 (8-95)||(42106151-42106238)
chr3 (4-116)||(45664247-45664351)
chr3 (1-95)||(32237977-32238070)
chr3 (60-117)||(1220255-1220312)
chr3 (1-78)||(27831168-27831245)
chr3 (1-116)||(40797050-40797166)
chr3 (217-273)||(44792236-44792292)
chr3 (28-95)||(913324-913391)
chr3 (214-273)||(49360405-49360464)
chr3 (217-271)||(50508489-50508543)
chr3 (1-116)||(22844069-22844185)
chr3 (217-273)||(23297926-23297982)
chr3 (217-273)||(41924423-41924479)
chr3 (217-271)||(48080498-48080552)
chr3 (216-273)||(13735241-13735298)
chr3 (224-273)||(39952957-39953006)
chr3 (1-70)||(40365290-40365359)
chr3 (54-95)||(50460231-50460272)
chr3 (217-273)||(19619139-19619195)
chr3 (217-273)||(24987005-24987061)
chr3 (221-273)||(50480671-50480723)
chr3 (20-114)||(31628949-31629042)
chr3 (1-82)||(25939460-25939541)
chr3 (217-273)||(50809258-50809314)
chr3 (217-273)||(50866548-50866604)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-117)||(1122-1238)
[»] chr5 (48 HSPs)
chr5 (5-116)||(28618622-28618732)
chr5 (1-116)||(31645847-31645962)
chr5 (5-102)||(4726913-4727010)
chr5 (1-114)||(5378322-5378435)
chr5 (1-117)||(41063377-41063493)
chr5 (1-116)||(6887159-6887274)
chr5 (1-116)||(19646022-19646137)
chr5 (14-115)||(28500736-28500837)
chr5 (1-116)||(29310335-29310445)
chr5 (5-116)||(4070572-4070681)
chr5 (1-116)||(2415418-2415533)
chr5 (5-104)||(32390632-32390731)
chr5 (8-116)||(15710560-15710668)
chr5 (1-75)||(10924114-10924188)
chr5 (1-95)||(33486550-33486644)
chr5 (1-117)||(9034923-9035045)
chr5 (8-87)||(35906344-35906423)
chr5 (11-116)||(6647904-6648009)
chr5 (8-116)||(34893904-34894012)
chr5 (1-116)||(37425011-37425129)
chr5 (12-116)||(41554504-41554609)
chr5 (1-116)||(8812132-8812248)
chr5 (217-273)||(18595818-18595874)
chr5 (217-273)||(29456248-29456304)
chr5 (12-116)||(34843934-34844038)
chr5 (9-105)||(34866456-34866552)
chr5 (1-95)||(22397529-22397622)
chr5 (1-87)||(28423784-28423870)
chr5 (54-95)||(14910698-14910739)
chr5 (1-106)||(41358067-41358172)
chr5 (217-273)||(7978489-7978545)
chr5 (217-273)||(14645774-14645830)
chr5 (216-273)||(31149295-31149352)
chr5 (60-117)||(41988201-41988258)
chr5 (217-273)||(15718791-15718847)
chr5 (217-273)||(41617034-41617090)
chr5 (54-117)||(29154272-29154334)
chr5 (58-95)||(13007724-13007761)
chr5 (58-95)||(13079177-13079214)
chr5 (20-116)||(18472725-18472821)
chr5 (217-273)||(1061418-1061474)
chr5 (54-106)||(6074770-6074822)
chr5 (217-273)||(34718365-34718421)
chr5 (217-273)||(41692049-41692105)
chr5 (64-115)||(34873880-34873931)
chr5 (218-271)||(10937895-10937948)
chr5 (58-95)||(13080185-13080222)
chr5 (54-114)||(17326211-17326271)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-115)||(36548-36662)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-105)||(12184-12288)
[»] scaffold0340 (1 HSPs)
scaffold0340 (3-116)||(11761-11873)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-114)||(244656-244769)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-104)||(137039-137143)
[»] scaffold0045 (1 HSPs)
scaffold0045 (54-116)||(9682-9744)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-115)||(11038-11147)
scaffold0011 (217-271)||(250677-250731)
[»] scaffold0005 (1 HSPs)
scaffold0005 (214-273)||(240061-240120)
[»] scaffold0164 (2 HSPs)
scaffold0164 (217-273)||(6706-6762)
scaffold0164 (217-273)||(14587-14643)
[»] scaffold0665 (1 HSPs)
scaffold0665 (1-47)||(1108-1154)
[»] scaffold1294 (1 HSPs)
scaffold1294 (28-105)||(809-886)
[»] scaffold0230 (1 HSPs)
scaffold0230 (217-273)||(27105-27161)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-47)||(10292-10338)


Alignment Details
Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7640337 - 7640452
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  7640337 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagt 7640436  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  7640437 tagaggggtgattttg 7640452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 25516622 - 25516512
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25516622 aaccaacgtcgcacgaagacgaagaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaatgagttaga 25516524  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  25516523 ggggtgattttg 25516512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43929337 - 43929447
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||| ||||    
T  43929337 aacaaaccaatgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaacatatgtgaaaatgacttatttcaataaaagggaaatacaaaaacgagt 43929436  T
Q  101 tagaggagtga 111  Q
    |||||||||||    
T  43929437 tagaggagtga 43929447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3603118 - 3603002
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||||||||| |||||| ||| |||||||  |||    
T  3603118 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgaaatagatatgaaaatcacttatttcaagaaaaggaaaagagaaaaacaagt 3603019  T
Q  101 tagaggagtgattttga 117  Q
    |||||| ||||||||||    
T  3603018 tagaggggtgattttga 3603002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3390565 - 3390450
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||  ||||||  |||    
T  3390565 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacaagt 3390466  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  3390465 tagaggggtgattttg 3390450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25771578 - 25771463
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||  ||||||  |||    
T  25771578 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacaagt 25771479  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  25771478 tagaggggtgattttg 25771463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 27191321 - 27191429
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  27191321 aaccaacgtcgtacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttaga 27191419  T
Q  105 ggagtgattt 114  Q
    || |||||||    
T  27191420 ggggtgattt 27191429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 27841135 - 27841243
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  27841135 aaccaacgtcgtacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttaga 27841233  T
Q  105 ggagtgattt 114  Q
    || |||||||    
T  27841234 ggggtgattt 27841243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5930556 - 5930441
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||  ||||||||||||| ||||||| ||||    
T  5930556 aacaaaccaacatcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttattgaaataaaagggaaacagaaaaacgagt 5930457  T
Q  101 tagaggagtgattttg 116  Q
    ||||||  ||||||||    
T  5930456 tagagggatgattttg 5930441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27024120 - 27024235
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||  ||||||  |||    
T  27024120 aacaaaccaatgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacaagt 27024219  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  27024220 tagaggggtgattttg 27024235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 43567003 - 43566894
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  |||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  43567003 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtg-aaatcacttatttcaataaaaaggaaatagaaaaacgagttaga 43566905  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  43566904 gg-gtgattttg 43566894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 6090020 - 6089911
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||| |||||||||||||| |||||||||||||||||  || ||  |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  6090020 aaccaacatcgcacgaagacgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgaattaga 6089923  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  6089922 ggggtgattttg 6089911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 44167695 - 44167805
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  |||||| |||| |||||||||||| ||||| ||||||||||| ||||||||    
T  44167695 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtg-aaattacttatttcaattaaaggaaaatagaaaaacgagttaga 44167793  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  44167794 ggggtgattttg 44167805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26491435 - 26491321
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| ||||||| |||||||| ||| |||||| | ||  ||||||||| |||||||||||||||||||||||||||||||||||||    
T  26491435 aacaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaaatgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaatgagt 26491337  T
Q  101 tagaggagtgattttg 116  Q
    || ||| |||||||||    
T  26491336 taaaggggtgattttg 26491321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 36508059 - 36507949
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||  |||||| |||| |||||||||||||||||| |||||||||||||||| |||    
T  36508059 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtg-aaattacttatttcaataaaaggaaaatagaaaaatgagtcaga 36507961  T
Q  105 ggagtgattttg 116  Q
    |  |||||||||    
T  36507960 gaggtgattttg 36507949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16879946 - 16880032
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaa 87  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  ||   |||||||||||||||||||||||||||||||||    
T  16879946 aacaaaccaacgtcgcacgaagacgatgaaatcacaagataaaaaacaaaataaatgtgaaaatcacttatttcaataaaagggaaa 16880032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16992079 - 16992165
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaa 87  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  ||   |||||||||||||||||||||||||||||||||    
T  16992079 aacaaaccaacgtcgcacgaagacgatgaaatcacaagataaaaaacaaaataaatgtgaaaatcacttatttcaataaaagggaaa 16992165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 41842081 - 41841969
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||| ||||||| ||||||||||||  | ||||| ||  |||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  41842081 aacaaaccaacgtcgcactaagacgacgaaatcacaaaa--agaaacgaaatagatgtgaaaatcgcttatttcaataaaagggaaagagaaaaacgagt 41841984  T
Q  101 tagaggagtgatttt 115  Q
    || ||| ||||||||    
T  41841983 taaaggggtgatttt 41841969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 42105733 - 42105848
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| |||||| | || ||||||| |||||||||||| |||||||  ||  ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  42105733 aacaaaacaacgttgtactaagacgacgaaatcacaaaagaaaaaacaaaatagatgtgaaagtcacttatttcaataaaagggaaatagaaaaacgagt 42105832  T
Q  101 tagaggagtgattttg 116  Q
    |||||  |||||||||    
T  42105833 tagagtggtgattttg 42105848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 38822202 - 38822115
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    |||||||||||||||||||||| |||||||||||||||||  || ||  ||||||||||||||||||||||| |||||||||||||||||    
T  38822202 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaacaaaagggaaatagaaaa 38822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 3465083 - 3464977
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||  ||||||||  |||||||||||||||||||| ||||||||||| ||||||| |      
T  3465083 caacgtcgcacaaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaa--tcacttatttcaataaaaggaaaatagaaaaacgagttagtgtg 3464986  T
Q  108 gtgattttg 116  Q
    |||||||||    
T  3464985 gtgattttg 3464977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29734323 - 29734207
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaataga-aaaatgag 99  Q
    |||||| ||||||| ||| |||||||  ||||||| ||| ||||| || ||  | |||||||||||||||||||||||||||||||||||| |||| |||    
T  29734323 aacaaaacaacgtcacactaagacgacaaaatcacgaaagaaaaagcgaaataggtgtgaaaatcacttatttcaataaaagggaaatagaaaaaacgag 29734224  T
Q  100 ttagaggagtgattttg 116  Q
    |||||||||||||||||    
T  29734223 ttagaggagtgattttg 29734207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25623026 - 25623141
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||| ||||||| ||||||| |||||||| ||| |||||||  ||  |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  25623026 aacaaaacaatgtcgcactaagacgacgaaatcacgaaagaaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 25623125  T
Q  101 tagaggagtgattttg 116  Q
    || | | |||||||||    
T  25623126 tatatgggtgattttg 25623141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 29812604 - 29812711
Alignment:
Q  10 acgtcgcacgaagacgatgaaatcacaaaataaaaaa-cgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggag 108  Q
    ||||||||| ||||||| |||||||| ||| |||||| || ||  |||||| ||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  29812604 acgtcgcactaagacgacgaaatcacgaaagaaaaaaacgaaatagatgtggaaatcacttatttcaataaaaggtaaagagaaaaatgagttagagggg 29812703  T
Q  109 tgattttg 116  Q
    ||||||||    
T  29812704 tgattttg 29812711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40125522 - 40125407
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| |||||| |||| |||| ||  |||||||||||||||||||  ||  |||||||||||||| |||||||||||||| ||||||||||||  |||    
T  40125522 aacaaaacaacgttgcactaagatgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcacgtatttcaataaaagagaaatagaaaaacaagt 40125423  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  40125422 tagaggggtgattttg 40125407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9715525 - 9715619
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||| |||||| | || ||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| ||| |||||||    
T  9715525 aacaaatcaacgttgtactaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaaggaaaaaagaaaaa 9715619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 19953696 - 19953587
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    |||||||| || ||||||| ||||| || ||| |||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||       
T  19953696 caacgtcgtactaagacgacgaaattacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagttagatag 19953597  T
Q  108 gtgattttga 117  Q
    ||||||||||    
T  19953596 gtgattttga 19953587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10589172 - 10589056
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaataga-aaaatgag 99  Q
    |||||| ||||||| ||| ||||||  |||||||| |||  ||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||  ||    
T  10589172 aacaaaacaacgtcacactaagacggagaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaaacaag 10589073  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  10589072 ttagaggggtgattttg 10589056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11931047 - 11930943
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| | ||    |||||||| || ||||||||||| |||||||| ||||||| ||||    
T  11931047 aacaaaccaacgtcacactaagacgatgaaatcacaaaataaaaaatgaaatacttgtgaaaaacatttatttcaatacaagggaaaaagaaaaacgagt 11930948  T
Q  101 tagag 105  Q
    |||||    
T  11930947 tagag 11930943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 15673953 - 15674036
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||| |||||||||||||||||||| || ||||| ||  |||| | |||||||||||||||||||||||||||||||||||    
T  15673953 gtcgcactaagacgatgaaatcacaaaaaaagaaacgaaatagatgggtaaatcacttatttcaataaaagggaaatagaaaaa 15674036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37883786 - 37883671
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| ||||| | |||| ||| ||| |||||||| ||  ||||| |||||||||||||| ||||||| ||||||||||||| || |    
T  37883786 aacaaaacaacgtcgcactaagacaacgaaaccacgaaagaaaaaacgaaatagatgttaaaatcacttattttaataaaaaggaaatagaaaaacgaat 37883687  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  37883686 tagaggggtgattttg 37883671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19580983 - 19581099
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaat-agaaaaatgag 99  Q
    |||||| ||| ||||||| |||||||  ||||||| ||| |||||| | ||  ||| ||||||||||||||||||||||||||||||| | ||||| |||    
T  19580983 aacaaaacaatgtcgcactaagacgacaaaatcacgaaagaaaaaatgaaatagatatgaaaatcacttatttcaataaaagggaaataaaaaaaacgag 19581082  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  19581083 ttagaggggtgattttg 19581099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 7443547 - 7443641
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||| ||||||||||| ||||||  |||||||| |||  ||||||| ||  ||||||||||| |||||||||||||||||| |||||||||||    
T  7443547 aacaaaacaacgtcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatgtgaaaattacttatttcaataaaaggaaaatagaaaaa 7443641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 11550588 - 11550663
Alignment:
Q  57 gtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgatttt-gaccctaaatcacccc 131  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||| ||| |||| ||||||||||| ||||    
T  11550588 gtgaaaatcacttatttcaataaaatgtaaaaagaaaaatgagttagaggggtggttttggaccctaaatcccccc 11550663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25237307 - 25237422
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| ||||||| |||||||  ||| |||||||| ||  ||||||||||| ||||||||||| ||||||||||  ||||||  |||    
T  25237307 aacaaaacaacgtcgcactaagacgacgaaatcatgaaagaaaaaacgaaatagatgtgaaaataacttatttcaacaaaagggaaagggaaaaacaagt 25237406  T
Q  101 tagaggagtgattttg 116  Q
    | |||  |||||||||    
T  25237407 tcgagaggtgattttg 25237422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 33867136 - 33867195
Alignment:
Q  214 atctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  33867136 atctagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 33867195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 41176976 - 41176902
Alignment:
Q  23 acgatgaaatcacaaaataaaaaacgtaactgatgtgaaa--atcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||| ||||||||||||||||||||| ||  |||||||||  |||||||||||||||||||| ||||||||||||    
T  41176976 acgaagaaatcacaaaataaaaaacgaaatagatgtgaaatcatcacttatttcaataaaagagaaatagaaaaa 41176902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 667575 - 667632
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  667575 ctagggatggcaattggactcaggcccaatggatactcgcataaaatacccacaatgg 667632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 4481567 - 4481511
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  4481567 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 4481511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 25425267 - 25425211
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  25425267 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 25425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 34480036 - 34479974
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||| | | |||||||||    
T  34480036 gatgtgaaaatcacttatttcaataaaagggaaagagaaaattgtgttataagggtgattttg 34479974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 2251379 - 2251439
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattt 114  Q
    |||||||||||||||||||| |||| |||||||  ||||||| || |||||||||||||||    
T  2251379 gatgtgaaaatcacttatttaaatagaagggaaggagaaaaacgatttagaggagtgattt 2251439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 35353776 - 35353682
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||| ||||||||||| ||||||| |||||||| ||| ||||| | ||| | ||||| |||||||||||||| ||||||||||||  |||||||    
T  35353776 aacaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaacc-taattcgatgtaaaaatcacttatttaaataaaagggaaggagaaaaa 35353682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 44441466 - 44441404
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    ||||||||||||||||||||| ||||||| |||| | ||||| ||||||||  ||||||||||    
T  44441466 gatgtgaaaatcacttatttcgataaaagagaaagataaaaacgagttagataagtgattttg 44441404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13268705 - 13268613
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    |||||| ||||||||||| |||||||  ||| ||| ||| ||||| || ||  ||||||||||||||||||||||| ||||||| || ||||||    
T  13268705 aacaaaacaacgtcgcactaagacgacaaaaccacgaaagaaaaa-cgaaatagatgtgaaaatcacttatttcaacaaaagggcaagagaaaa 13268613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 4290160 - 4290104
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  4290160 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 4290104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 23232246 - 23232190
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| |||||||||  ||||| |||||||||    
T  23232246 tagggatggcaattggacccagacccaatggatacccgcaacaaatatccacaatgg 23232190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 38620902 - 38620846
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| ||||||| ||| ||||| |||||| ||| |||||    
T  38620902 tagggatggcaattggacccagatccaatggatatccgcaaaaaatatccataatgg 38620846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 17249347 - 17249292
Alignment:
Q  218 agggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||| |||||| ||||| ||||||||  |||||||| ||||||||||||||||    
T  17249347 agggatgacaattgaacccaagtccaatgggtacccgcaaaaaatacccacaatgg 17249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 22651994 - 22652037
Alignment:
Q  52 ctgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||    
T  22651994 ctgatgtaaaaatcacttatttaaataaaagggaaaaagaaaaa 22652037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 31440239 - 31440294
Alignment:
Q  218 agggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||| ||  | |||||||||| ||| ||||||||||||||||    
T  31440239 agggatggcaattggacctagaccaaatgaatacctgcaaaaaatacccacaatgg 31440294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 95
Target Start/End: Complemental strand, 24500592 - 24500558
Alignment:
Q  61 aaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||||||||||||| |||||||||||||    
T  24500592 aaatcacttatttcaataaaatggaaatagaaaaa 24500558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 3397961 - 3398054
Alignment:
Q  2 acaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||| ||| ||||||| ||||||| |||||||| ||| ||||| |  |  ||||||||| |||||||| || ||||||||||||  |||||||    
T  3397961 acaaaacaatgtcgcacaaagacgacgaaatcacgaaagaaaaatctaatttgatgtgaagatcacttacttaaataaaagggaaggagaaaaa 3398054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 15234531 - 15234478
Alignment:
Q  220 ggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||| |||| |||   ||||||| ||||||||||||||||    
T  15234531 ggatggcaattggacccatgtccgatgggcacccgcaaaaaatacccacaatgg 15234478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 13142173 - 13142229
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   ||||  |||||| || ||||||||||||||||    
T  13142173 tagggatggcaattggacccagactcaatagatacccacaaaaaatacccacaatgg 13142229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 15149826 - 15149882
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| ||||||||| |||  |||||| |||||||||||||||| ||| |||||    
T  15149826 tagggatgacaattggactcagacccaatggatacccgcataaaatatccataatgg 15149882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 20937569 - 20937513
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||| || |||||  || ||||| |||||| |||||||||    
T  20937569 tagggatggcaattggacccacgttcaatgggtatccgcaaaaaatatccacaatgg 20937513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 32909128 - 32909088
Alignment:
Q  55 atgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||| |||||||||||||||||||||||| | ||||||    
T  32909128 atgtgaacatcacttatttcaataaaagggaattcgaaaaa 32909088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23067829 - 23067942
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  23067829 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagt 23067928  T
Q  101 tagaggagtgattt 114  Q
    |||||| |||||||    
T  23067929 tagaggggtgattt 23067942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9661986 - 9661871
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| |||||||  |||    
T  9661986 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaagaaaaacaagt 9661887  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  9661886 tagaggggtgattttg 9661871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42972171 - 42972056
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||  |||    
T  42972171 aacaaaccaacgtcgcacgaagacgacgaaaccacaaaataaaaaacgtaacaaatgtgaaaatcacttatttcaataaaagcaaaatagaaaaacaagt 42972072  T
Q  101 tagaggagtgattttg 116  Q
    |||| |||||||||||    
T  42972071 tagatgagtgattttg 42972056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 46716875 - 46716988
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  46716875 aacaaaccaacgtcgcacgaagatgacgaaatcacaaaataaaaaacgtaatagatgcgaaaatcacttatttcaataaaaggaaaatagaaaaacgagt 46716974  T
Q  101 tagaggagtgattt 114  Q
    |||||  |||||||    
T  46716975 tagagaggtgattt 46716988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 12519789 - 12519673
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12519789 aacaaaccaacgtcgcactaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 12519690  T
Q  101 tagaggagtgattttga 117  Q
    |||| || |||||||||    
T  12519689 tagatgattgattttga 12519673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9474520 - 9474623
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  9474520 aacaaaccaacgtcgcacgaatacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaaaggaaagagaaaaatgagt 9474619  T
Q  101 taga 104  Q
    ||||    
T  9474620 taga 9474623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 54420701 - 54420808
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||| ||||||||||| |||||||||||    
T  54420701 caacgtcgcacaaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaaggaaaatagaaaaacgagttagagga 54420799  T
Q  108 gtgattttg 116  Q
    |||||||||    
T  54420800 gtgattttg 54420808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4634416 - 4634301
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||  ||  ||||||||||||||||||||||||||||||||||  ||||||  |||    
T  4634416 aacaaaccaacgtcgcacgaagacgacgaaatcacaaattaaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacaagt 4634317  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  4634316 tagaggggtgattttg 4634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2945270 - 2945176
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| |||||||    
T  2945270 aacaaaccaacgtcgcactatgacgatgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaa 2945176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 53903735 - 53903630
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    |||||||| |||||||||| ||||||||||||||||||| | ||  ||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  53903735 caacgtcgtacgaagacgacgaaatcacaaaataaaaaatgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttagagga 53903637  T
Q  108 gtgattt 114  Q
    |||||||    
T  53903636 gtgattt 53903630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31601339 - 31601443
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaa-cgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| || ||  ||||||||||||||||||||||||||||||||||||| |||| |||    
T  31601339 aacaaaccaacgtcgcaagaagacgacgaaatcacaaaataaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaatagcaaaacgag 31601438  T
Q  100 ttaga 104  Q
    |||||    
T  31601439 ttaga 31601443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 20961578 - 20961490
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||  ||||||||||||||||||||||||||||||||||||||||||    
T  20961578 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 20961490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41486708 - 41486593
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||| |||||| |||||||  |||||||||||||||||||| ||  |||||||||||| |||||||||||| |||||||| ||||||| ||||    
T  41486708 aacaaaccaacatcgcacaaagacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatctcttatttcaatataagggaaagagaaaaacgagt 41486609  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  41486608 tagaggggtgattttg 41486593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 9549599 - 9549467
Alignment:
Q  2 acaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtt 101  Q
    |||||||||||| |||||| ||||| ||||||| ||||||||||||| ||  |||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  9549599 acaaaccaacgtagcacgacgacgacgaaatcaaaaaataaaaaacgaaatagatgtggaaatcacttatttcaataaaaggaaaagagaaaaacgagtt 9549500  T
Q  102 agaggagtgatttt--gaccctaaatcacccct 132  Q
    ||| | ||||||||  |||| ||||||||||||    
T  9549499 agaagtgtgattttgggaccttaaatcacccct 9549467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 52555716 - 52555817
Alignment:
Q  15 gcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattt 114  Q
    ||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||| |||||||||  |||||||    
T  52555716 gcacgaagacgacaaaatcacaaaataaaaaacgtaaaagatgtgaaaatcacttatttcaataaaagataaatagaaaaacgagttagagaggtgattt 52555815  T
Q  115 tg 116  Q
    ||    
T  52555816 tg 52555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14542493 - 14542597
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||| |||||  ||||||  |||    
T  14542493 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaaaggaaaaggaaaaacaagt 14542592  T
Q  101 tagag 105  Q
    |||||    
T  14542593 tagag 14542597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 15729962 - 15730095
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatag-aaaaatgag 99  Q
    |||||| ||| ||||||| ||||||| |||||||||||| || ||||| ||  || ||| |||||||||||||||||||||||||||||| |||||  ||    
T  15729962 aacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagaagtgtaaatcacttatttcaataaaagggaaatagaaaaaacaag 15730061  T
Q  100 ttagaggagtgattttgaccctaaatcacccctc 133  Q
     |||||| ||||||||||||| ||||||||||||    
T  15730062 atagaggggtgattttgacccaaaatcacccctc 15730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44375245 - 44375361
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| | ||  ||||||||||| ||||||||||| ||||    |||||||||| || |    
T  44375245 aacaaacgaacgtcgcacgaagacgacgaaatcacaaaataaaaaaagaaatagatgtgaaaattacttatttcaaaaaaataataatagaaaaacgaat 44375344  T
Q  101 tagaggagtgattttga 117  Q
    |||||||||||||||||    
T  44375345 tagaggagtgattttga 44375361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 32189113 - 32189004
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaat-aaaagggaaatagaaaaatgag 99  Q
    |||||||||||||||||||||||||| ||||||||||   |||||||| ||  |||||||||||||||||||||||| |||||||||| ||||||| ||     
T  32189113 aacaaaccaacgtcgcacgaagacgacgaaatcacaa---aaaaaacgaaatagatgtgaaaatcacttatttcaataaaaagggaaaaagaaaaacgaa 32189017  T
Q  100 ttagaggagtgat 112  Q
    ||||||| |||||    
T  32189016 ttagaggggtgat 32189004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38434732 - 38434618
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||||| ||||||||||| ||||||| |||||||||||| ||||||   || | |||||||||||||||||||| |||||||| |||||||||||| |||    
T  38434732 aacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaaaaaataaaatagatgtgaaaatcacttattttaataaaagagaaatagaaaaacgag 38434633  T
Q  100 ttagaggagtgattt 114  Q
    ||||||| |||||||    
T  38434632 ttagaggggtgattt 38434618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34115632 - 34115748
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaat-aaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||| ||  ||| | |||||||||| ||||||||||||||||| ||||||| ||     
T  34115632 aacataccaacgtcgcacgaagacgacgaaatcacaaaataaaaaaacgaaatagatataaaaatcacttctttcaataaaagggaaagagaaaaacgaa 34115731  T
Q  100 ttagaggagtgattttg 116  Q
     |||||| |||||||||    
T  34115732 ctagaggggtgattttg 34115748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 40859779 - 40859650
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatga-g 99  Q
    |||||| ||||||||||| ||||||  |||||||| |||  ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||  | |    
T  40859779 aacaaaacaacgtcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaaacaag 40859680  T
Q  100 ttagaggagtgattttgaccctaaatcacccctc 133  Q
    ||||||| ||    ||||||||||||||||||||    
T  40859679 ttagaggtgt----ttgaccctaaatcacccctc 40859650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16992005 - 16991890
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||| ||| || |||  |||| ||| |||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16992005 aacaaaacaacgtcacactaaaacggggaaaccacgaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagt 16991906  T
Q  101 tagaggagtgattttg 116  Q
    |||| | |||||||||    
T  16991905 tagatgggtgattttg 16991890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28990431 - 28990328
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||| | |||||  ||||| |||||||||||||  ||  ||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  28990431 aacaaaccaacgtcgcactatgacgacaaaatcccaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagagaaagagaaaaacgagt 28990332  T
Q  101 taga 104  Q
    ||||    
T  28990331 taga 28990328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37869398 - 37869513
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||| ||||||||  |||||||| |||| ||||   ||  |||||||||||||||||||||||||||||||||| | ||||| ||||    
T  37869398 aacaaaccaacgtcgcaagaagacgacaaaatcacataatacaaaataaaatagatgtgaaaatcacttatttcaataaaagggaaagataaaaacgagt 37869497  T
Q  101 tagaggagtgattttg 116  Q
    ||||||  ||||||||    
T  37869498 tagagggatgattttg 37869513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 51646207 - 51646112
Alignment:
Q  20 aagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgatttt 115  Q
    ||||||| |||||||| ||| |||||||| ||  |||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||    
T  51646207 aagacgacgaaatcacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaataaaaaaacgaattagaggggtgatttt 51646112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 46728901 - 46729015
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||| ||||||| ||||||| |||||||||||| || ||||| ||  || ||| |||||||||||||||||||||||||||||||||||  | |    
T  46728901 aacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcacttatttcaataaaagggaaatagaaaaacaaat 46729000  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  46729001 tagagg-gtgattttg 46729015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 34459218 - 34459272
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34459218 tagggatggcaattggacccaggtccaatggatacccgcataaaatacccacaat 34459272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28588695 - 28588579
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaat-aaaagggaaatagaaaaatgag 99  Q
    |||||| ||||||||||| ||||| | |||||||| ||| |||||| | ||  |||| |||||||| |||||||||| |||||||||| ||||||| |||    
T  28588695 aacaaaacaacgtcgcactaagacaaagaaatcacgaaagaaaaaatgaaatagatgcgaaaatcatttatttcaataaaaagggaaagagaaaaacgag 28588596  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  28588595 ttagaggggtgattttg 28588579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 38170154 - 38170233
Alignment:
Q  15 gcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    |||| |||||||||||||||| |||||||||||| ||   ||||||||||||||||||||||| ||||||||| ||||||    
T  38170154 gcactaagacgatgaaatcacgaaataaaaaacgaaataaatgtgaaaatcacttatttcaatgaaagggaaaaagaaaa 38170233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50003157 - 50003220
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaat 64  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||||    
T  50003157 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 50003220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9526320 - 9526433
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| |||||||| || ||| |||  ||||| ||||| |||||||  ||  |||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  9526320 aacaaaacaacgtcgtactaaggcgacaaaatcgcaaaagaaaaaacaaaatagatgtgaaaatcacttatttcaatcaaagggaaagagaaaaacgagt 9526419  T
Q  101 tagaggagtgattt 114  Q
    || | |||||||||    
T  9526420 taaatgagtgattt 9526433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30416602 - 30416718
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatag-aaaaatgag 99  Q
    |||||| ||||||||||| |||||   |||||||| ||| |||||    ||  ||||||||||||||||||||||||||||||||||||| |||||  ||    
T  30416602 aacaaaacaacgtcgcactaagacagcgaaatcacgaaagaaaaacaaaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaaacaag 30416701  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  30416702 ttagaggtgtgattttg 30416718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43156909 - 43156795
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| |||||| |||| ||||||| |||||||||||  |||||||  |   |||||||||||||||||||||||||||| |||||||  |||| | ||    
T  43156909 aacaaaacaacgttgcactaagacgacgaaatcacaaagaaaaaaacaaagtagatgtgaaaatcacttatttcaataaaaaggaaata-taaaacgtgt 43156811  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  43156810 tagaggggtgattttg 43156795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23926174 - 23926061
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||||| ||||| ||||| ||||||| |||||||| ||| ||||| | ||||| |||||||||||||||||||| |||| |||||||  |||||||  ||    
T  23926174 aacaaaacaacgccgcactaagacgacgaaatcacgaaagaaaaacc-taactcgatgtgaaaatcacttatttaaatagaagggaaggagaaaaacaag 23926076  T
Q  100 ttagaggagtgattt 114  Q
    ||||||| |||||||    
T  23926075 ttagaggggtgattt 23926061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1657547 - 1657648
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||| ||||||| ||||||| |||||||||||| ||||| || ||  ||||||||||||||| ||||  |||||| | ||||||||||| ||||    
T  1657547 aacaaaacaatgtcgcactaagacgacgaaatcacaaaagaaaaagcgaaatagatgtgaaaatcactaatttttataaaaagtaaatagaaaaacgagt 1657646  T
Q  101 ta 102  Q
    ||    
T  1657647 ta 1657648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 33983657 - 33983604
Alignment:
Q  220 ggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  33983657 ggatggcaattggacccaggcccaatggatacccgcataaaatacctacaatgg 33983604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 29148603 - 29148659
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  29148603 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 29148659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 32655106 - 32655162
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  32655106 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 32655162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 42755864 - 42755808
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||    
T  42755864 tagggatggcaattagacccagatccaatggatacccgcaaaaaatacccacaatgg 42755808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 652758 - 652703
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatg 272  Q
    ||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||    
T  652758 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatg 652703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 14577314 - 14577255
Alignment:
Q  214 atctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||||| ||||||| |||||| || |||||| |||||||||    
T  14577314 atctagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgg 14577255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 12186298 - 12186240
Alignment:
Q  215 tctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||||| ||||||| |||||| || |||||| |||||||||    
T  12186298 tctagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgg 12186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44021552 - 44021638
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaa 87  Q
    |||||||||||||| ||  |||||||  ||||||||||||||||||||  |  ||||||||||||||||||| |||  |||||||||    
T  44021552 aacaaaccaacgtcacattaagacgacaaaatcacaaaataaaaaacgatatagatgtgaaaatcacttattgcaacgaaagggaaa 44021638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 1645980 - 1646037
Alignment:
Q  59 gaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||||||| ||||||||||||||| |||| ||||||| |||||||||| |||||||||    
T  1645980 gaaaatcatttatttcaataaaagagaaagagaaaaacgagttagaggggtgattttg 1646037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 2720821 - 2720878
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||| ||||||| |||||| || |||||| |||||||||    
T  2720821 ctagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgg 2720878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 52596067 - 52596014
Alignment:
Q  218 agggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  52596067 agggatggcaattggacccagatccaatggatacccgcaaaaaatactcacaat 52596014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 6408569 - 6408458
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaa-cgtaact--gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||||||| ||||||  |||||||| ||| |||||| || || |  ||||||||||||| ||||||||| |||||||||||| ||||| |||||| |    
T  6408569 caacgtcgcaccaagacgtcgaaatcacgaaagaaaaaaacgaaattttgatgtgaaaatcaattatttcaacaaaagggaaatataaaaacgagttaaa 6408470  T
Q  105 ggagtgattttg 116  Q
    |  |||||||||    
T  6408469 gaggtgattttg 6408458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 42052854 - 42052910
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||| ||||||  |||||| ||||||||| ||||||||||||||||    
T  42052854 tagggatggcaattgaacccagacccaatggatacccgcaaaaaatacccacaatgg 42052910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 52180361 - 52180417
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  52180361 tagggatgacaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 52180417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 29474370 - 29474429
Alignment:
Q  36 aaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||| |||||||| ||  ||| || |||||||||||||||||||||||||||||||||||    
T  29474370 aaaaaaaaaaacgaaatagatatgtaaatcacttatttcaataaaagggaaatagaaaaa 29474429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 12188292 - 12188234
Alignment:
Q  215 tctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| ||||||||||||||| ||||||| |||||| || |||||| |||||||||    
T  12188292 tctagggacggcaattggacccagatccaatggatacccacaaaaaatatccacaatgg 12188234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 3169115 - 3169058
Alignment:
Q  59 gaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||||||| ||||||||||||||| |||| | ||||| |||||||||| |||||||||    
T  3169115 gaaaatcatttatttcaataaaagagaaagaaaaaaacgagttagaggggtgattttg 3169058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 46775844 - 46775941
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagag 105  Q
    ||||||| ||| ||||||| |||||||||||| |||||||  ||  || || | ||| |||||||||||| ||||||||| ||||||| ||| |||||    
T  46775844 caacgtcacactaagacgacgaaatcacaaaagaaaaaacaaaatagaggtaacaattacttatttcaattaaagggaaagagaaaaacgagatagag 46775941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 1757622 - 1757678
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||| ||| |||||||||| |||||    
T  1757622 tagggatggcaattggacccagacccaatggatacctgcaaaaaatacccataatgg 1757678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3094564 - 3094620
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||| ||||||  ||||||  |||||||| ||||||||||||||||    
T  3094564 tagggatggcaattgaacccagacccaatgggtacccgcaaaaaatacccacaatgg 3094620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3386813 - 3386869
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||| ||   |||||| ||||||||| ||||||||||||||||    
T  3386813 tagggatggcaattggacacaaacccaatggatacccgcaaaaaatacccacaatgg 3386869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 3673703 - 3673643
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattt 114  Q
    |||||||||||||||||||| ||||||| ||||  ||||||| || ||||||| |||||||    
T  3673703 gatgtgaaaatcacttatttaaataaaaaggaaggagaaaaacgatttagaggggtgattt 3673643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 4622699 - 4622807
Alignment:
Q  10 acgtcgcacgaagacgatgaaatcacaaaataaaa-aacgtaactgatgtgaaaatcacttatttcaataa-aagggaaatagaaaaatgagttagagga 107  Q
    ||||||||| ||||||| ||||||||||||||||| |||| ||   ||||| ||||||||||||| ||||| || ||||| ||||||| ||| || ||      
T  4622699 acgtcgcactaagacgacgaaatcacaaaataaaagaacgaaataaatgtggaaatcacttattttaataagaaaggaaagagaaaaacgagatacagag 4622798  T
Q  108 gtgattttg 116  Q
    |||||||||    
T  4622799 gtgattttg 4622807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 5388595 - 5388535
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattt 114  Q
    |||||||||||||||||||| ||||| ||||||  ||||||| || ||||||| |||||||    
T  5388595 gatgtgaaaatcacttatttaaataagagggaaggagaaaaacgatttagaggggtgattt 5388535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7242750 - 7242830
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaa 81  Q
    |||||| | ||||||||| |||||||  | |||||| ||||||||| | ||  |||||||||||| |||||||||||||||    
T  7242750 aacaaatcgacgtcgcactaagacgacaatatcacagaataaaaaatgaaatagatgtgaaaatcgcttatttcaataaaa 7242830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 25938880 - 25938824
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| | ||||| ||||||  | ||||||||||||||||    
T  25938880 tagggatggcaattggacccagattcaatggatacccataaaaaatacccacaatgg 25938824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 28928207 - 28928263
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||| | || | |||||| |||||||||||||||| |||||||||    
T  28928207 tagggatggcaattgggcacatgcccaatggatacccgcataaaatatccacaatgg 28928263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33020906 - 33021009
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||||| || |||||||| |||| |||||||||||||||  || | | ||| | |||||||||||||||||||| |||| |||||||  ||||||||||     
T  33020906 aacaaaacagcgtcgcactaagatgatgaaatcacaaaaggaata-cataattcgatgtgaaaatcacttatttaaatagaagggaagaagaaaaatgat 33021004  T
Q  100 ttaga 104  Q
    |||||    
T  33021005 ttaga 33021009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 35338518 - 35338426
Alignment:
Q  10 acgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtta 102  Q
    ||||| ||| |||||||| |||||| ||||||||||||| ||   | || || |||||||||||||| | |||||||| |||| |||||||||    
T  35338518 acgtcccactaagacgataaaatcataaaataaaaaacgaaatacaagtaaacatcacttatttcaacataagggaaagagaagaatgagtta 35338426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 52801799 - 52801855
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  52801799 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 52801855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 53141146 - 53141090
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  53141146 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 53141090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 2073220 - 2073274
Alignment:
Q  218 agggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||| ||| |||||| |||| ||||||||||||| |||||||    
T  2073220 agggatggcaattggacc-aggcccaatggatacgcgcataaaatacctacaatgg 2073274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 21246355 - 21246306
Alignment:
Q  223 tggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||||    
T  21246355 tggcaattggacccaggtccaatgggtacccg-aaaaaatacccacaatgg 21246306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 46030724 - 46030670
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    |||||||||||||||||||||| | ||||| ||||||||  |||| |||||||||    
T  46030724 tagggatggcaattggacccagattcaatggatacccgctaaaaaaacccacaat 46030670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 1125022 - 1124981
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||||||||||||||||  |||||||| ||||    
T  1125022 gatgtgaaaatcacttatttcaataaataggaaataggaaaa 1124981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 11817151 - 11817090
Alignment:
Q  55 atgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    ||||||||||||||||||| || |||||||||  ||||||| ||  |||||| |||||||||    
T  11817151 atgtgaaaatcacttatttaaacaaaagggaaggagaaaaacgatgtagaggggtgattttg 11817090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 21076346 - 21076293
Alignment:
Q  220 ggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||  ||||||  |||||||| |||||| |||||||||    
T  21076346 ggatggcaattggacccagacccaatgggtacccgcaaaaaatatccacaatgg 21076293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 23147925 - 23147872
Alignment:
Q  220 ggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||   |||||| ||||||||| |||||| |||||||||    
T  23147925 ggatggcaattggacccaaacccaatggatacccgcaaaaaatatccacaatgg 23147872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 23963835 - 23963759
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaaggg 84  Q
    |||| |||||| ||||||||||||||| |||| ||||||| ||||| ||||||||||  |||| ||| ||||||||||    
T  23963835 caacatcgcacaaagacgatgaaatcataaaagaaaaaac-taactagatgtgaaaacaacttctttaaataaaaggg 23963759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36804538 - 36804623
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaa 86  Q
    |||||| ||| | ||||| ||||||| |||||||||||| |||||||  ||   || |||||||||||||||| ||||||| ||||    
T  36804538 aacaaaacaatgccgcactaagacgacgaaatcacaaaagaaaaaaccaaatatatatgaaaatcacttatttaaataaaaaggaa 36804623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 8066480 - 8066424
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||||| |||| || ||||  |||||||| ||||||||||||||||    
T  8066480 tagggatgacaattggatccagatctaatgggtacccgcaaaaaatacccacaatgg 8066424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 22312955 - 22313011
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||  ||||||| ||||| | |||| |||||||||||||||| |||||||||    
T  22312955 tagggatgataattggatccaggcctaatggatacccgcataaaatatccacaatgg 22313011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 46386814 - 46386858
Alignment:
Q  61 aaatcacttatttcaataaaagggaaatagaaaaatgagttagag 105  Q
    |||||| |||||||||||||||||||| |||||||  ||||||||    
T  46386814 aaatcatttatttcaataaaagggaaagagaaaaacaagttagag 46386858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 54932332 - 54932388
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| |||||||  ||| | || |||||||| |||||||    
T  54932332 tagggatggcaattggacccagatccaatgggtacactcaaaaaatacctacaatgg 54932388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41996678 - 41996568
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  41996678 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaagggaaatacaaaaacgagt 41996579  T
Q  101 tagaggagtga 111  Q
    |||||| ||||    
T  41996578 tagaggtgtga 41996568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32104819 - 32104935
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||| || |    
T  32104819 aacaaaccaacgtcgtacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaaaagaaatagaaaaacgaat 32104918  T
Q  101 tagaggagtgattttga 117  Q
    |||||||| ||||||||    
T  32104919 tagaggagagattttga 32104935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9270154 - 9270039
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  9270154 aacaaaccaacgtcgcacgaagacaacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 9270055  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  9270054 tagaggggtgattttg 9270039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8054788 - 8054894
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaa-aacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| |||    
T  8054788 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaaacgtaacagatgtgaaaatcacttatttcaatataagggaaatagaaaaacgag 8054887  T
Q  100 ttagagg 106  Q
    |||||||    
T  8054888 ttagagg 8054894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36545762 - 36545873
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  36545762 aacaaaccaacgtcgcacaaagacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 36545861  T
Q  101 tagaggagtgat 112  Q
    |||||| |||||    
T  36545862 tagaggggtgat 36545873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 16996873 - 16996982
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||| |||||| |||| ||||||||    
T  16996873 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtg-aaatcacttatttcaataaaaggaaaatag-aaaacgagttaga 16996970  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  16996971 ggggtgattttg 16996982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31874217 - 31874102
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||| |||| |||||||  |||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||  |||||| ||||    
T  31874217 aacaaaccaacgttgcacaaagacgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacgagt 31874118  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  31874117 tagaggggtgattttg 31874102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9992800 - 9992683
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaa--taaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatga 98  Q
    |||||||||||||||||||||||||| |||||||||| |  || |||| | ||  |||||||||||||||||||||||||||||||||| ||||||| ||    
T  9992800 aacaaaccaacgtcgcacgaagacgacgaaatcacaagagatacaaaatgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacga 9992701  T
Q  99 gttagaggagtgattttg 116  Q
    |||||||| |||||||||    
T  9992700 gttagaggggtgattttg 9992683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 44295449 - 44295345
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||| |||||  ||||||  |||    
T  44295449 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaaaggaaaaggaaaaacaagt 44295350  T
Q  101 tagag 105  Q
    |||||    
T  44295349 tagag 44295345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5989763 - 5989648
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||| ||||||||||||| || ||||  |||||||||||||||||||| ||  ||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  5989763 aacataccaacgtcgcactaaaacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcataaaaagggaaagagaaaaacgagt 5989664  T
Q  101 tagaggagtgattttg 116  Q
    |||||  |||||||||    
T  5989663 tagagatgtgattttg 5989648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32412923 - 32412809
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||  ||   |||||||||||||||||||||||||||||||||  | |||| ||||    
T  32412923 aacaaaccaacgtcgcacgaagacgacgaaatcacaagataaaaaacaaaataaatgtgaaaatcacttatttcaataaaagggaaa-gggaaaacgagt 32412825  T
Q  101 tagaggagtgattttg 116  Q
     ||||| |||||||||    
T  32412824 gagaggggtgattttg 32412809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 5328099 - 5327989
Alignment:
Q  2 acaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcactta-tttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||| ||||| || | ||||||||||||||||||||  ||  ||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  5328099 acaaaccaacgtcggacgaaaacaaagaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttattttcaataatagggaaagagaaaaatgagt 5328000  T
Q  101 tagaggagtga 111  Q
    |||||| ||||    
T  5327999 tagaggggtga 5327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32256702 - 32256817
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| |||| |||||| ||||||  |||||||| |||  ||||||| ||  |||||||||||||||||||||||||||||||||||| |||||  |||    
T  32256702 aacaaaacaacatcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaataaaaaaacaagt 32256801  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  32256802 tagaggggtgattttg 32256817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 3681045 - 3680941
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtga 111  Q
    ||||||| || ||||  |||||||||||||||||||| ||  ||||||||||||| |||||||||||||||| ||| |||||||  |||||||| |||||    
T  3681045 gtcgcactaaaacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcatttatttcaataaaaggaaaagagaaaaacaagttagagaagtga 3680946  T
Q  112 ttttg 116  Q
    |||||    
T  3680945 ttttg 3680941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 16808982 - 16808896
Alignment:
Q  29 aaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||||||||||||||||||| ||  ||||||| |||||||||||||||||||| ||||| |||||||||||||||| | |||||||||    
T  16808982 aaatcacaaaataaaaaacgaaatagatgtgataatcacttatttcaataaaa-ggaaagagaaaaatgagttagatgggtgattttg 16808896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16937320 - 16937435
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||| ||||||| ||||||| |||||||||||| || ||||| ||  |||||| ||||||||||||| | |||||||||||||||||||  |||    
T  16937320 aacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttaagtaaaagggaaatagaaaaacaagt 16937419  T
Q  101 tagaggagtgattttg 116  Q
    ||||||  ||||||||    
T  16937420 tagagggatgattttg 16937435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 31147786 - 31147881
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||| |||||| ||||||| |||||||||||||||||| || ||  |||||||||||||||||| ||||||||||||||  ||||||| ||||    
T  31147786 aaccaacctcgcactaagacgacgaaatcacaaaataaaaagcgaaatagatgtgaaaatcacttatgtcaataaaagggaacgagaaaaacgagt 31147881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 1667671 - 1667612
Alignment:
Q  214 atctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  1667671 atctagggatggcaattggacccaggcccaatggatacccgcataaattacccacaatgg 1667612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 37129659 - 37129746
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||| ||||||| |||||||||||||||||  || ||  |||||||||||||||||||||||||||||  |||||||||||    
T  37129659 aaccaacgtcgcac-aagacgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaagaaaaatagaaaaa 37129746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37659099 - 37658984
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||| ||||||| ||||| | |||||||||||| || ||||| ||  || ||| ||||||||||||||||||||||||||||| |||||  | |    
T  37659099 aacaaaacaaggtcgcactaagacaacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcacttatttcaataaaagggaaatataaaaacaaat 37659000  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  37658999 tagaggggtgattttg 37658984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10042905 - 10042811
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||| |||||| |||| ||||||| |||||||  ||| |||||||| ||  || |||||||||||||||||||||||||||||| ||||||||    
T  10042905 aacaaaacaacgttgcactaagacgacgaaatcatgaaagaaaaaacgaaatagaagtgaaaatcacttatttcaataaaagggaattagaaaaa 10042811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 15237622 - 15237731
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttag 103  Q
    |||||||| ||| || ||||||| ||||| ||||||||||||  | |||  |||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  15237622 aaaccaacatcgtactaagacgaagaaataacaaaataaaaacag-aacatatgtgaaaatcacttacttcaataaaagggaaagagaaaaacgagttag 15237720  T
Q  104 aggagtgattt 114  Q
    | | |||||||    
T  15237721 atgggtgattt 15237731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7269445 - 7269558
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||| | |||||  |||||||||||||||||||  ||  ||||||||||||||||||| |||| ||| ||||| | ||||  ||||    
T  7269445 aacaaaccaacgtcgcactatgacgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttattacaattaaaaggaaagaaaaaagcgagt 7269544  T
Q  101 tagaggagtgattt 114  Q
    |||| | |||||||    
T  7269545 tagaagggtgattt 7269558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7281108 - 7281221
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| ||||||| | ||||  ||||||||||||||||||||  ||  |||||||||||||||||||||||| ||| | ||||| ||||  ||||    
T  7281108 aacaaaccaatgtcgcactatgacggcgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaattaaaagaaaataaaaaagcgagt 7281207  T
Q  101 tagaggagtgattt 114  Q
    |||| | |||||||    
T  7281208 tagatgggtgattt 7281221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 11655891 - 11656004
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| |||| ||| ||||||||||| |||||| | ||  |||| |||||||||||||||| |||||| ||||  ||||||| ||||    
T  11655891 aacaaaacaacgtcgcactaagatgataaaatcacaaaagaaaaaatgaaatagatgagaaaatcacttatttcgataaaaaggaacgagaaaaacgagt 11655990  T
Q  101 tagaggagtgattt 114  Q
    | || |||||||||    
T  11655991 tggaagagtgattt 11656004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13864492 - 13864391
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| ||| |||   |||||| ||  |||||||| ||  |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  13864492 aacaaaacaacgtcgcactaaggcgacagaatcacgaacgaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaataaaaaaacgagt 13864393  T
Q  101 ta 102  Q
    ||    
T  13864392 ta 13864391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 2620557 - 2620613
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  2620557 tagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgg 2620613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 15665653 - 15665557
Alignment:
Q  20 aagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    ||||||| |||||||  ||| |||||||| ||  ||||||||||| ||||||||||||||||| |||| |||||||  ||||||||| |||||||||    
T  15665653 aagacgacgaaatcatgaaagaaaaaacgaaatagatgtgaaaattacttatttcaataaaagtgaaagagaaaaacaagttagaggggtgattttg 15665557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 5457200 - 5457153
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaac 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  5457200 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaac 5457153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 2628993 - 2628932
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||    
T  2628993 gatgtgaaaatcacttatttcaataaaagggaaatag-aaaacgagttagatgggtgattttg 2628932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 16938263 - 16938365
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtga 111  Q
    ||||||| ||||||| |||||||  ||| |||||||  ||  ||||||||||||||||||||||| |||||||||| |||||||  ||||| |||| |||    
T  16938263 gtcgcactaagacgacgaaatcatgaaagaaaaaacaaaatagatgtgaaaatcacttatttcaacaaaagggaaagagaaaaacaagttaaaggaatga 16938362  T
Q  112 ttt 114  Q
    |||    
T  16938363 ttt 16938365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 25500563 - 25500509
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  25500563 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaat 25500509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 6110136 - 6110080
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||    
T  6110136 tagggatggcaattggacccatgttcaatggatacctgcataaaatacccacaatgg 6110080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 19643111 - 19643167
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||| |||||||||    
T  19643111 tagggatggcaattggacccatgcccaatggatacccgcataaaatatccacaatgg 19643167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26937658 - 26937542
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||| ||||| |||||||  |||||| ||   || ||||  ||  ||||||| ||| |||||||||||||||||||||| || |||| ||||    
T  26937658 aacaaaccaacgacgcactaagacgacaaaatcataatcaaagaaactaaatagatgtgagaattacttatttcaataaaagggaaaaaggaaaacgagt 26937559  T
Q  101 tagaggagtgattttga 117  Q
    |||||| ||||||||||    
T  26937558 tagaggggtgattttga 26937542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1215320 - 1215433
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||||| ||||||| ||| ||||||| ||||||||||||  |||| | ||| | |||||||||||||||||||| |||||||| |||  ||||||||||     
T  1215320 aacaaaacaacgtcacactaagacgacgaaatcacaaaaggaaaacc-taattcgatgtgaaaatcacttatttaaataaaagagaaggagaaaaatgat 1215418  T
Q  100 ttagaggagtgattt 114  Q
    ||||||  |||||||    
T  1215419 ttagagcggtgattt 1215433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12244197 - 12244313
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaataga--aaaatga 98  Q
    |||||| ||||||||||| |||| || |||||||| ||| |||||||| ||   || |||||||||||||| |||| |||||||||| |||  |||| ||    
T  12244197 aacaaaacaacgtcgcactaagatgacgaaatcacgaaagaaaaaacgaaataaatttgaaaatcacttatatcaacaaaagggaaa-agatgaaaacga 12244295  T
Q  99 gttagaggagtgattttg 116  Q
    |||| |||||||||||||    
T  12244296 gttaaaggagtgattttg 12244313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 24790025 - 24789971
Alignment:
Q  219 gggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||  |||||||||||||||| |||||| |||||||||    
T  24790025 gggatggcaattggacccagacccaatgaatacccgcaaaaaatatccacaatgg 24789971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3616464 - 3616520
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  ||||||  |||||||| ||||||||||||||||    
T  3616464 tagggatggcaattggacccagacccaatgggtacccgcaaaaaatacccacaatgg 3616520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 5917730 - 5917836
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    ||||||||||| ||||||| |||||||| ||| |||||||| ||  |||||||||||||  ||||| ||| ||||||||| || |||| ||| ||||||     
T  5917730 caacgtcgcactaagacgacgaaatcacgaaagaaaaaacgaaatagatgtgaaaatca-atattttaattaaagggaaagag-aaaacgagctagaggg 5917827  T
Q  108 gtgattttg 116  Q
    |||||||||    
T  5917828 gtgattttg 5917836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 24891045 - 24891101
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||| ||| |||||||||||||| |||| | ||||||||||||||||||||||||||    
T  24891045 taggcatgacaattggacccaggcccaacggatacccgcataaaatacccacaatgg 24891101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 2472059 - 2472105
Alignment:
Q  227 aattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||    
T  2472059 aattggatccaggtccaatggatacccgcataaaatatccacaatgg 2472105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14115809 - 14115855
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaac 47  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||    
T  14115809 aacaaaccaacgtcacacgaagatgacgaaatcacaaaataaaaaac 14115855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17019251 - 17019205
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaac 47  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||    
T  17019251 aacaaaccaacgtcgcactaagacgaccaaatcacaaaataaaaaac 17019205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17549688 - 17549642
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaac 47  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||    
T  17549688 aacaaaccaacgtcgcactaagacgaccaaatcacaaaataaaaaac 17549642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 7058081 - 7058029
Alignment:
Q  219 gggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    ||||||| |||||||||||||||| |||  |||||||| ||||||||||||||    
T  7058081 gggatggtaattggacccaggtccgatgggtacccgcaaaaaatacccacaat 7058029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 32920771 - 32920672
Alignment:
Q  15 gcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgatt 113  Q
    |||| ||||||| |||||||||||| ||||| | ||| | |||||||||||||||||||| ||||||| ||||  ||||||| || ||||||  ||||||    
T  32920771 gcactaagacgacgaaatcacaaaagaaaaacc-taattcgatgtgaaaatcacttatttaaataaaaaggaaggagaaaaacgatttagagcggtgatt 32920673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 23766819 - 23766772
Alignment:
Q  55 atgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtta 102  Q
    ||||||||||||||||||| ||||||| | ||||||||||| ||||||    
T  23766819 atgtgaaaatcacttattttaataaaatgaaaatagaaaaacgagtta 23766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 37719983 - 37719905
Alignment:
Q  2 acaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaa 81  Q
    ||||| ||||||||||| ||||||| |||||||| ||| |||||  | ||  ||||||||||||| ||||||||||||||    
T  37719983 acaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaat-gaaatagatgtgaaaatcatttatttcaataaaa 37719905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 6833610 - 6833541
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttattt 73  Q
    |||||||| |||||| ||||| |  |||||||||||||||||||  ||  ||||| ||||||||||||||    
T  6833610 aaaccaacatcgcactaagacaacaaaatcacaaaataaaaaacaaaatagatgtaaaaatcacttattt 6833541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 7954557 - 7954516
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||||||||| ||||||||||||  |||||||    
T  7954557 gatgtgaaaatcacttatttaaataaaagggaaggagaaaaa 7954516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 30801757 - 30801705
Alignment:
Q  221 gatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||| |||||||||| ||| |||| |||| |||||| |||||||||    
T  30801757 gatggcaattgaacccaggtccgatggatactcgcaaaaaatatccacaatgg 30801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23320573 - 23320458
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  23320573 aacaaaccaacgtcacacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatgacttatttcaataaaagggaaatagaaaaacgagt 23320474  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  23320473 tagaggggtgattttg 23320458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44562730 - 44562845
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||||||||| || |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  44562730 aacaaaccaacgtcgcacgaagatgacgaaatcacaaaatataaaacgtaacagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagt 44562829  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  44562830 tagaggggtgattttg 44562845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 1768095 - 1767968
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||| ||||||| || |||||    
T  1768095 aaccaacgtcacacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcatttatttcaataaaagggaaagagaaaaacgaattaga 1767996  T
Q  105 ggagtgattttgaccctaaatcacccctc 133  Q
    |||||||||| | ||||||||||||||||    
T  1767995 ggagtgatttag-ccctaaatcacccctc 1767968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5832367 - 5832253
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaa-cgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  5832367 aacaaaccaacgtcgcaagaagacgacgaaatcacaaaataaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgag 5832268  T
Q  100 ttagaggagtgattt 114  Q
    ||||||| |||||||    
T  5832267 ttagaggggtgattt 5832253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 21326606 - 21326492
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| ||| ||||||||||| ||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  21326606 aacaaaccaatgtcacacgaagacgacgaaatcgtaaaataaaaaacgcaacagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagt 21326507  T
Q  101 tagaggagtgatttt 115  Q
    |||||| ||||||||    
T  21326506 tagaggggtgatttt 21326492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 4564646 - 4564536
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  4564646 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagagaaatagaaaaacgagttaga 4564548  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  4564547 ggggtgattttg 4564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22344893 - 22345008
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||  ||||||  |||    
T  22344893 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacaagt 22344992  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  22344993 tagaggggtgattttg 22345008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 630765 - 630879
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaa-cgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  630765 aacaaaccaacgtcgcaagaagacgacgaaatcacaaaataaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgag 630864  T
Q  100 ttagaggagtgattt 114  Q
    ||||| | |||||||    
T  630865 ttagatgggtgattt 630879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15276431 - 15276546
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  15276431 aacaaaccaacgtcgcacgaaaacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 15276530  T
Q  101 tagaggagtgattttg 116  Q
     ||| | |||||||||    
T  15276531 gagatgggtgattttg 15276546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 45659171 - 45659060
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||| ||||||| ||||||||||||||||||| | ||  |||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  45659171 aaccaacgtcgcacaaagacgacgaaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaaggtaaagagaaaaacgagttaga 45659072  T
Q  105 ggagtgattttg 116  Q
    | ||||||||||    
T  45659071 gcagtgattttg 45659060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23257221 - 23257108
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  ||   |||||||||||||||||||||||||||||||||  |||||| ||||    
T  23257221 aacaaaccaacgtcgcacgaagacgatgaaatcacaagataaaaaacaaaataaatgtgaaaatcacttatttcaataaaagggaaagggaaaaacgagt 23257122  T
Q  101 tagaggagtgattt 114  Q
     ||||| |||||||    
T  23257121 gagaggggtgattt 23257108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 40992462 - 40992332
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcactta--tttcaataaaagggaaatagaaaaatgagttagag 105  Q
    |||||||||||||||| || ||||||||||||||||||||| ||   ||||||||||||||||  ||||||||||||||||| ||||||| |||||||||    
T  40992462 caacgtcgcacgaagatgacgaaatcacaaaataaaaaacgaaataaatgtgaaaatcacttatttttcaataaaagggaaagagaaaaacgagttagag 40992363  T
Q  106 gagtgattttg---accctaaatcacccctc 133  Q
    | |||||||||   |||||||||||||||||    
T  40992362 gggtgattttggataccctaaatcacccctc 40992332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 15698329 - 15698230
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  15698329 aaccaacgtcacacaaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagttaga 15698230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 40488378 - 40488491
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| ||||||| |||||||||||| |||||||| ||  ||||||||||||  |||||||||||||||||||| |||||||| |||    
T  40488378 aacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaaaaacgaaatagatgtgaaaatcgtttatttcaataaaagggaaagagaaaaataagt 40488477  T
Q  101 tagaggagtgattt 114  Q
    |||||| |||||||    
T  40488478 tagaggggtgattt 40488491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10877479 - 10877364
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| |||| || |||||||| ||| |||||||| ||  ||| |||||||||||| ||||||||||||||||| ||||||| ||||    
T  10877479 aacaaaacaacgtcgcactaagatgacgaaatcacgaaagaaaaaacgaaatagatatgaaaatcacttttttcaataaaagggaaagagaaaaacgagt 10877380  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  10877379 tagaggtgtgattttg 10877364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 14717230 - 14717329
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaa-taaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagg 106  Q
    ||||||||||| ||||||| |||||||||||| ||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  14717230 caacgtcgcacaaagacgacgaaatcacaaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaagaaaaacgagttagagg 14717329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38646717 - 38646602
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| | ||  ||||| |||||||||||||||||||||||  ||| ||||||| ||||    
T  38646717 aacaaaccaacgtcgcacgaagacgacaaaatcacaaaataaaaaatgaaatagatgttaaaatcacttatttcaataaaagaaaaagagaaaaacgagt 38646618  T
Q  101 tagaggagtgattttg 116  Q
    || | | |||||||||    
T  38646617 tacatgggtgattttg 38646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38644778 - 38644871
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| || | || ||||||||||||||||||| ||||| |||| ||||||    
T  38644778 aacaaaccaatgtcgcacgaagacgaagaaatcacaaaataaaaaacggaatttatttgaaaatcacttatttcaaaaaaagagaaaaagaaaa 38644871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 6212878 - 6212982
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtga 111  Q
    ||||||| ||||||| |||||| |||||||||||||   |  ||||||||||||||||||||||||||||||||||  |||||| |||||||||| ||||    
T  6212878 gtcgcacaaagacgacgaaatcccaaaataaaaaacaagatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacgagttagaggtgtga 6212977  T
Q  112 ttttg 116  Q
    |||||    
T  6212978 ttttg 6212982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 8893407 - 8893311
Alignment:
Q  20 aagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||||||||||||||| ||| |||| ||| ||  |||||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||    
T  8893407 aagacgatgaaatcacgaaagaaaagacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagttagaagggtgattttg 8893311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36621485 - 36621390
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaat 96  Q
    |||||||||||| |||||||||||||  ||||||||||| |||||||| ||  ||||||||| ||||||||||||||||||| |||| ||||||||    
T  36621485 aacaaaccaacgccgcacgaagacgacaaaatcacaaaacaaaaaacgaaatagatgtgaaagtcacttatttcaataaaagagaaagagaaaaat 36621390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32539171 - 32539273
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||| || |||||||  |||||||||||||||||||  ||  |||| |||||||||||||||||||||||  |||| ||||||||||||    
T  32539171 aacaaaccaacgtcgtactaagacgacaaaatcacaaaataaaaaacaaaatagatgcgaaaatcacttatttcaataaaaatgaaagagaaaaatgagt 32539270  T
Q  101 tag 103  Q
    |||    
T  32539271 tag 32539273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 35077872 - 35077986
Alignment:
Q  2 acaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtt 101  Q
    ||||| |||||||| || ||||||| |||||||| ||| |||||||| ||  ||||||||||||||||||||||||||||  |||| ||||||| |||||    
T  35077872 acaaaacaacgtcgtactaagacgacgaaatcacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaaatgaaagagaaaaacgagtt 35077971  T
Q  102 agaggagtgattttg 116  Q
    ||||  |||||||||    
T  35077972 agagaggtgattttg 35077986  T

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Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 900241 - 900142
Alignment:
Q  15 gcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaa-gggaaatagaaaaatgagttagaggagtgatt 113  Q
    |||| ||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||| | |||||||||||| ||| ||||||    
T  900241 gcacaaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaaagggaaaga-aaaaatgagttacaggggtgatt 900143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 33177585 - 33177693
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    ||||||||||| ||||| |||||||||| ||| |||||||| ||  |||||||||||||||||||||||||||| ||||| | ||||| |||||||| |     
T  33177585 caacgtcgcactaagacaatgaaatcacgaaagaaaaaacgaaatggatgtgaaaatcacttatttcaataaaaaggaaaga-aaaaaggagttagatgg 33177683  T
Q  108 gtgattttga 117  Q
     |||||||||    
T  33177684 atgattttga 33177693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 19506896 - 19506840
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  19506896 tagggatggcaattggacccaggcccaatggatacccgcataaaatacccacaatgg 19506840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 52839663 - 52839571
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaa 93  Q
    |||||| ||||||||||| |||||||  ||||||| ||| |||||||| ||   |||||||||||||||||||||||||||||||| ||||||    
T  52839663 aacaaaacaacgtcgcactaagacgacaaaatcacgaaagaaaaaacgaaataaatgtgaaaatcacttatttcaataaaagggaattagaaa 52839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29067182 - 29067080
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| |||| ||||||||||||||  ||| || | ||  ||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  29067182 aacaaaacaacgtcgcactaagaagatgaaatcacaaagaaaagaa-gaaatagatgtgagaatcacttatttcaataaaagggaaagagaaaaacgagt 29067084  T
Q  101 taga 104  Q
    ||||    
T  29067083 taga 29067080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 52752156 - 52752046
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||  ||  ||||||||     ||||||||||||||||||||| ||||||| ||||    
T  52752156 aacaaaccaatgtcgtacgaagacgacaaaatcacaaaataaaaaacaaaatagatgtgaa-----cttatttcaataaaagggaaaaagaaaaacgagt 52752062  T
Q  101 tagaggagtgattttg 116  Q
    |||||  |||||||||    
T  52752061 tagagaggtgattttg 52752046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33703491 - 33703583
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    |||||| ||||| || || ||||||| |||||||| ||| ||||| || ||  |||||||||||||||||||||||||||||||||||||||||    
T  33703491 aacaaaacaacgccgtactaagacgacgaaatcacgaaagaaaaa-cgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaa 33703583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 44513971 - 44514064
Alignment:
Q  2 acaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||| ||| ||||||| ||||||| ||| |||||||| || ||||  ||  |||||| |||||||||||||||||||||||||||||||||||    
T  44513971 acaaaacaaggtcgcactaagacgacgaattcacaaaaaaagaaacaaaatggatgtgtaaatcacttatttcaataaaagggaaatagaaaaa 44514064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 2978930 - 2978874
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  2978930 tagggatggcaattggacccaggtccaatggataaccgcataaaatacccataatgg 2978874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12148029 - 12148133
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||| ||| ||| ||||||| | |||||| ||| |||||||  ||  |||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  12148029 aacaaaacaaagtcacactaagacgacggaatcacgaaagaaaaaacaaaatagatgtgaaaatcacttatttgaataaaaaggaaatagaaaaacgagt 12148128  T
Q  101 tagag 105  Q
    |||||    
T  12148129 tagag 12148133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27469689 - 27469769
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaa 81  Q
    |||||| ||||||||||| ||||||| |||||||||||| |||||||| ||  ||||||||||| |||||||| |||||||    
T  27469689 aacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaaaaacgaaatagatgtgaaaataacttattttaataaaa 27469769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 28221480 - 28221424
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  28221480 tagggatggcaattggacccaggcccaatggatacccgcataaaatagccacaatgg 28221424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 49651977 - 49651853
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaa---------cgtaactgatgtgaaaatcacttatttcaataaaagggaaataga 91  Q
    ||||||| |||||| ||||||||||| |||||||||||||||||||         || ||  ||||||||| ||| |||||||||||||| |||||||||    
T  49651977 aacaaacgaacgtcacacgaagacgacgaaatcacaaaataaaaaataaaaaaaacgaaatagatgtgaaattcatttatttcaataaaaaggaaataga 49651878  T
Q  92 aaaatgagttagaggagtgattttg 116  Q
    |||| |||||||| | |||||||||    
T  49651877 aaaacgagttagatgtgtgattttg 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 17579844 - 17579786
Alignment:
Q  58 tgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||    
T  17579844 tgaaaatcacttatttcaattaaagggaaagagaaaaatgagttagagggatgattttg 17579786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22032072 - 22032164
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    ||||||||||| |||||| ||||| | ||||| ||||||||||||||  ||  |||||||||| ||||||||||||||||||| ||| ||||||    
T  22032072 aacaaaccaacatcgcactaagacaa-gaaattacaaaataaaaaacaaaagagatgtgaaaaacacttatttcaataaaaggaaaagagaaaa 22032164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 9222756 - 9222700
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  9222756 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 9222700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 13313248 - 13313192
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  13313248 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 13313192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 2974840 - 2974887
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaata 263  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  2974840 ctagggatggcaattggactcaggtccaatggatacccgcataaaata 2974887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 21260345 - 21260392
Alignment:
Q  218 agggatggcaattggacccaggtccaatgaatacccgcataaaatacc 265  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  21260345 agggatgggaattggacccaggcccaatgaatacccgcataaaatacc 21260392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 25814925 - 25814983
Alignment:
Q  215 tctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| |||||| |||||||||    
T  25814925 tctagggatggcaattagacccagatccaatggatacccgcaaaaaatatccacaatgg 25814983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2350755 - 2350658
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatga 98  Q
    |||||| ||||||||||| |||||||  |||||||||||  |||| |  |  ||||||||||||||||||||| ||||||| ||||  ||||||||||    
T  2350755 aacaaaacaacgtcgcactaagacgactaaatcacaaaaggaaaatctaatttgatgtgaaaatcacttatttaaataaaatggaagaagaaaaatga 2350658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 27784013 - 27783957
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| ||||||| |||||| || |||||| |||||||||    
T  27784013 tagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgg 27783957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 32835106 - 32835162
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||| ||| ||| |||||||||||| ||||||||||||||||||||    
T  32835106 tagggatgacaattgaacctaggcccaatgaatacctgcataaaatacccacaatgg 32835162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 38491930 - 38491878
Alignment:
Q  221 gatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||||    
T  38491930 gatggcaattggacccatacccaatggatacccgcataaaatacccacaatgg 38491878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 42068721 - 42068777
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||||||||||||    
T  42068721 tagggatggcaattggacccaaatccaatgggtacccgcaaaaaatacccacaatgg 42068777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 29054196 - 29054255
Alignment:
Q  214 atctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||| ||||||||||||  |||||||| |||||||| |||||||| |||||||    
T  29054196 atctagggatgacaattggacccatatccaatgagtacccgcaaaaaatacctacaatgg 29054255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37662343 - 37662257
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaa 87  Q
    |||||| ||||||||||| ||||| || ||||||||||| ||| ||| ||| | |||||||||||||||||||  |||||||||||||    
T  37662343 aacaaaacaacgtcgcactaagacaataaaatcacaaaa-aaacaacctaattcgatgtgaaaatcacttattaaaataaaagggaaa 37662257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 37685111 - 37685192
Alignment:
Q  36 aaaataaaaaacgtaactgatgtgaaaatcacttatttcaat--aaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||| |||||||| ||| | ||||||||||||||||||||||  |||| |||||||| |||| ||||||||||| ||||||||    
T  37685111 aaaaaaaaaaacgaaacaggtgtgaaaatcacttatttcaataaaaaaaggaaatag-aaaacgagttagaggattgattttg 37685192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 37700407 - 37700326
Alignment:
Q  36 aaaataaaaaacgtaactgatgtgaaaatcacttatttcaat--aaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||| |||||||| ||| | ||||||||||||||||||||||  |||| |||||||| |||| ||||||||||| ||||||||    
T  37700407 aaaaaaaaaaacgaaacaggtgtgaaaatcacttatttcaataaaaaaaggaaatag-aaaacgagttagaggattgattttg 37700326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 48655100 - 48655147
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtt 101  Q
    ||||||||| |||||||||||||||||||||||| | |||||||||||    
T  48655100 gatgtgaaattcacttatttcaataaaagggaaagataaaaatgagtt 48655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 13969631 - 13969705
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaag 82  Q
    ||||||||||| |||||||||||||||  ||  |||||||| ||  |||||||| ||| ||||||||||||||||    
T  13969631 caacgtcgcactaagacgatgaaatcatgaagaaaaaaacgaaatagatgtgaagatcgcttatttcaataaaag 13969705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 30853816 - 30853865
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttag 103  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  30853816 gatgtgaaaatcatttatttcaatgaaagggaaagagaaaaatgacttag 30853865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 43634131 - 43634183
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccaca 269  Q
    ||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||||    
T  43634131 ctagggatggcaattggacccagatccaatggata-ccgcaaaaaatacccaca 43634183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 2433724 - 2433668
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||||| ||||  |||||| ||||||||| ||||||||||||||||    
T  2433724 tagggatgacaattggatccagacccaatggatacccgcaaaaaatacccacaatgg 2433668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 4892875 - 4892931
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  4892875 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 4892931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 20415492 - 20415436
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| ||| |||   ||||||| ||||||||||||||||    
T  20415492 tagggatggcaattggacccagatccgatgggcacccgcaaaaaatacccacaatgg 20415436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 25059614 - 25059558
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||||  ||||| |||| | ||||||||||| |||||||    
T  25059614 tagggatggcaattggacccaggctcaatggatactcacataaaatacctacaatgg 25059558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28213181 - 28213069
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||| |||| ||||| |||||||  |||||||||||||||||||| ||  |||||| ||||||||||||   || ||||| ||| ||||||| ||||    
T  28213181 aacaaactaacgccgcacaaagacgacaaaatcacaaaataaaaaacgaaatagatgtg-aaatcacttatt--cattaaaggaaaagagaaaaacgagt 28213085  T
Q  101 tagaggagtgattttg 116  Q
    |||  | |||||||||    
T  28213084 tagtagggtgattttg 28213069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 29185612 - 29185556
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  29185612 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 29185556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 33362478 - 33362534
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  33362478 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 33362534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 46589295 - 46589193
Alignment:
Q  14 cgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgat 112  Q
    ||||| ||||||| |||||||| ||| ||||||   || | |||||||||||||||||||| |||||||| ||||||  |||| |||||||||| |||||    
T  46589295 cgcacaaagacgacgaaatcacgaaagaaaaaaacaaagtagatgtgaaaatcacttattttaataaaagagaaata-taaaacgagttagagg-gtgat 46589198  T
Q  113 tttga 117  Q
    |||||    
T  46589197 tttga 46589193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 237027 - 236972
Alignment:
Q  218 agggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||| | || |||  |||||||| ||||||||||||||||    
T  237027 agggatggcaattggacccaagcccgatggttacccgcaaaaaatacccacaatgg 236972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 10264812 - 10264761
Alignment:
Q  82 gggaaatagaaaaatgagttagaggagtgattttgaccctaaatcacccctc 133  Q
    |||||| |||||||  | ||||||| ||||||||||||||||||||||||||    
T  10264812 gggaaagagaaaaacaaattagaggggtgattttgaccctaaatcacccctc 10264761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 34566810 - 34566736
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaa 86  Q
    ||||||| ||||||| ||||||||||||  |||| | ||| | |||||||||||||||||||| ||||||||||||    
T  34566810 gtcgcactaagacgacgaaatcacaaaaggaaaacc-taattcgatgtgaaaatcacttatttaaataaaagggaa 34566736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 13691792 - 13691854
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||||||||||||||||||| |||| ||| |||  ||||||| || ||||||| |||||||||    
T  13691792 gatgtgaaaatcacttatttaaatagaagtgaaggagaaaaacgatttagaggggtgattttg 13691854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 14106828 - 14106782
Alignment:
Q  215 tctagggatggcaattggacccaggtccaatgaatacccgcataaaa 261  Q
    |||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  14106828 tctagggatggcaattggacccaggtcctatggacacccgcaaaaaa 14106782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 26199672 - 26199635
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaa 92  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26199672 gatgtgaaaatcacttatttcaat-aaagggaaatagaa 26199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 30490173 - 30490119
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    |||||||||||||||||||||||| | |||   ||||||| ||||||||||||||    
T  30490173 tagggatggcaattggacccaggttcgatgggcacccgcaaaaaatacccacaat 30490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 28192035 - 28192092
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||||  || ||| | ||||||| ||||||||||| ||||    
T  28192035 ctagggatggcaattggacccagaccctatggacacccgcaaaaaatacccactatgg 28192092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 35978102 - 35978159
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||||  ||||||  |||||||| ||||||  ||||||||    
T  35978102 ctagggatggcaattggacccagacccaatgggtacccgcaaaaaatattcacaatgg 35978159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 7843068 - 7843012
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||| || || ||||| ||||||||| ||||||| || |||||    
T  7843068 tagggatggcaattggactcatgttcaatggatacccgcacaaaatactcataatgg 7843012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 10786713 - 10786665
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacc 265  Q
    |||||||||||||||||||||||||| |||  ||||||||  |||||||    
T  10786713 tagggatggcaattggacccaggtccgatgggtacccgcaacaaatacc 10786665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12967713 - 12967757
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaa 45  Q
    |||||||||||||||||||| || || | ||||||||||||||||    
T  12967713 aacaaaccaacgtcgcacgatgatgacggaatcacaaaataaaaa 12967757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 27356744 - 27356827
Alignment:
Q  3 caaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaa 86  Q
    |||| |||||| |||| |||| || |||||||| ||| ||||||| ||| | |||||||||||||||||||| ||||||| ||||    
T  27356744 caaaacaacgttgcactaagatgacgaaatcacgaaa-aaaaaacctaattcgatgtgaaaatcacttatttaaataaaaaggaa 27356827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 44327527 - 44327582
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||| |||||  |||||| ||| ||||| ||||||||||||||||    
T  44327527 tagggatggcaattgggcccagacccaatggata-ccgcaaaaaatacccacaatgg 44327582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30992804 - 30992919
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||    
T  30992804 aacaaatcaacgtcgcacgaagacgacaaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacaagt 30992903  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  30992904 tagaggggtgattttg 30992919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 26017639 - 26017753
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || |    
T  26017639 aacaaaccaacatcgcacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaagggaaataaaaaaacgaat 26017738  T
Q  101 tagaggagtgatttt 115  Q
    |||||| ||||||||    
T  26017739 tagaggggtgatttt 26017753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 47749867 - 47749752
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| |||     
T  47749867 aacaaaccaacgtcgcacgaagacaacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgaga 47749768  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  47749767 tagaggggtgattttg 47749752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 24470523 - 24470413
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  24470523 aaccaacgtcgcacgttgacgatgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttaga 24470425  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  24470424 ggggtgattttg 24470413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25855201 - 25855316
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  25855201 aacaaaccaacgtcgcacgaagacgacaaaatcacaaaataaaaaacgaaatagatatgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 25855300  T
Q  101 tagaggagtgattttg 116  Q
    ||||||  ||||||||    
T  25855301 tagagggatgattttg 25855316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40775400 - 40775285
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||  |||||| ||||    
T  40775400 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacgagt 40775301  T
Q  101 tagaggagtgattttg 116  Q
    || ||| |||||||||    
T  40775300 tataggggtgattttg 40775285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23732374 - 23732490
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||| |||||||||||||  |||| ||||||| ||||    
T  23732374 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacatatttcaataaaatagaaagagaaaaacgagt 23732473  T
Q  101 tagaggagtgattttga 117  Q
    ||||| |||||||||||    
T  23732474 tagagaagtgattttga 23732490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42490836 - 42490720
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtg-aaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| ||  |||||| ||||||||||||||| |||||||||||| ||||||| |||    
T  42490836 aacaaaccaacgtcacacgaagacgatgaaatcacaaaataaagaacgaaatagatgtgaaaaatcacttatttcgataaaagggaaaaagaaaaacgag 42490737  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  42490736 ttagaggggtgattttg 42490720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 135126 - 135229
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| | ||  |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  135126 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaatacaaaatgaaatagatgtgaaaatcacctatttcaataaaagggaaagagaaaaatgagt 135225  T
Q  101 taga 104  Q
    ||||    
T  135226 taga 135229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 8611608 - 8611714
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  8611608 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttaga 8611706  T
Q  105 ggagtgat 112  Q
    || |||||    
T  8611707 ggggtgat 8611714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 24475471 - 24475361
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||  ||||| ||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  24475471 aaccaacgtcgcacgtggacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttaga 24475373  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  24475372 ggggtgattttg 24475361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 43807131 - 43807246
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||||  ||||||| |||||||| |||||||||||| ||||    
T  43807131 aacaaaccaacatcgcacgaagacgacgaaatcacaaaataaaatacgtaacagatgtgaaaattgcttattttaataaaagagaaatagaaaaacgagt 43807230  T
Q  101 tagaggagtgattttg 116  Q
    |||||  |||||||||    
T  43807231 tagagaggtgattttg 43807246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 49167055 - 49166946
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  49167055 aaccaacgtcgcacgaagacgacgaaatcacgaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacaagttaga 49166957  T
Q  105 ggagtgatttt 115  Q
    || ||||||||    
T  49166956 ggggtgatttt 49166946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 35661654 - 35661544
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttag 103  Q
    ||||||||||||||||||||||| |||||||||||||||||||   ||  |||||||| |||||||||||||||||||||||||  |||||| |||||||    
T  35661654 aaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaataaaatagatgtgaagatcacttatttcaataaaagggaaaaggaaaaacgagttag 35661555  T
Q  104 aggagtgattt 114  Q
    || ||||||||    
T  35661554 agtagtgattt 35661544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13008654 - 13008759
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||  ||  ||||||||||||||||||||||||||||| |||| |||||||  |||    
T  13008654 aacaaaccaacgtcgcactaagacgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagagaaagagaaaaactagt 13008753  T
Q  101 tagagg 106  Q
    ||||||    
T  13008754 tagagg 13008759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 37399752 - 37399645
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    ||||||||||| ||||||| |||||| ||||||||||||   ||  ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||     
T  37399752 caacgtcgcacaaagacgacgaaatctcaaaataaaaaataaaatagatgtgaaaatcatttatttcaataaaagggaaagagaaaaacgagttagaggg 37399653  T
Q  108 gtgatttt 115  Q
    ||||||||    
T  37399652 gtgatttt 37399645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9933980 - 9933866
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||| ||||||  |||||||||||| |||||||| ||  ||||| |||||||||||||| ||||||||||||||||||| |  |||    
T  9933980 aacaaaacaacgtcgcactaagacggcgaaatcacaaaagaaaaaacgaaatagatgtaaaaatcacttattttaataaaagggaaatagaaatactagt 9933881  T
Q  101 tagaggagtgatttt 115  Q
    |||||| ||||||||    
T  9933880 tagaggggtgatttt 9933866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43483733 - 43483639
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||| ||||||||||| ||||||  ||||||||||||  ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  43483733 aacaaaacaacgtcgcactaagacggcgaaatcacaaaagcaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 43483639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7986025 - 7985920
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||| |||||||| || |||||||||||||| |||| | ||  ||||||||||||| ||||||||||| |||||||| ||||||| ||||    
T  7986025 aacaaaccaacgtcacacgaagatgacgaaatcacaaaatacaaaatgaaatagatgtgaaaatcatttatttcaatagaagggaaagagaaaaacgagt 7985926  T
Q  101 tagagg 106  Q
    ||||||    
T  7985925 tagagg 7985920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 39090242 - 39090133
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaataga-aaaatgagttagagg 106  Q
    ||||||||||| |||| || |||||||||||| |||||| | ||  |||||||||||||||||||||||||||||||||||||| |||| |||||||||     
T  39090242 caacgtcgcacaaagatgacgaaatcacaaaagaaaaaatgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaaacgagttagaga 39090143  T
Q  107 agtgattttg 116  Q
     |||||||||    
T  39090142 ggtgattttg 39090133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15123961 - 15124076
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa-tgag 99  Q
    |||||||||||||   || | ||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| | ||||| | ||    
T  15123961 aacaaaccaacgttatactatgacgatgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaagataaaaacttag 15124060  T
Q  100 ttagaggagtgatttt 115  Q
    ||||||| ||||||||    
T  15124061 ttagaggggtgatttt 15124076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22751571 - 22751458
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||| |||| | |||||  |||| ||||||||||||||| |||| || |||||||||||||||| |||||||||||||||| |||| ||||    
T  22751571 aacaaaccaacgt-gcactacgacgacaaaattacaaaataaaaaacgaaactaatatgaaaatcacttattttaataaaagggaaatagtaaaacgagt 22751473  T
Q  101 tagaggagtgatttt 115  Q
    |||| | ||||||||    
T  22751472 tagaagggtgatttt 22751458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 44681593 - 44681481
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||| |||  |||||| |||| |||||||| |||| || ||  |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44681593 aacaaaccaacgtcacactgagacgacgaaaccacaaaatcaaaa-cgaaatagatgtgaaaatcacttatttcaataaaagggaaaaagaaaaacgagt 44681495  T
Q  101 tagaggagtgatttt 115  Q
    |||||| ||||||||    
T  44681494 tagagg-gtgatttt 44681481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 40476837 - 40476741
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtta 102  Q
    ||||||||| | |||||||||| ||||||||||||||||||||| ||  |||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  40476837 aaccaacgttgtacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtg-aaataacttatttcaataaaaggaaaatagaaaaacgagtta 40476741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 47156521 - 47156435
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaa 93  Q
    |||||||||| ||||||||||| |||||||||||||||||  || ||  |||||||||||||||||||||||||||||| |||||||||    
T  47156521 aaccaacgtcacacgaagacgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaaggaaaatagaaa 47156435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 19895651 - 19895735
Alignment:
Q  20 aagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||| ||||||||||||||||||||  ||  |||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  19895651 aagacgacgaaatcacaaaataaaaaacaaaatagatgcgaaaatcacttatttcaataaaagggaaaaggaaaaatgagttaga 19895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8319448 - 8319354
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||  ||   ||||||||||||||||||| ||||||| ||||| |||||||    
T  8319448 aacaaaccaacgtcgtacgaagacgacaaaatcacaaaataaaaaactaaatatatgtgaaaatcacttattttaataaaatggaaaaagaaaaa 8319354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 35141735 - 35141848
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagg--gaaatagaaaaatgagtt 101  Q
    |||| |||||||||| ||||||| | ||||||||||||||||| | ||  ||||||||||||||||||||||||||||||   ||| | |||||||||||    
T  35141735 aaactaacgtcgcactaagacgacggaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaaggttaaaagacaaaaatgagtt 35141834  T
Q  102 agaggagtgatttt 115  Q
    ||| | ||||||||    
T  35141835 agaagggtgatttt 35141848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5025037 - 5025152
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatag-aaaaatgag 99  Q
    |||||| ||| ||||||| ||||||| |||||||||||| || ||||| ||  || ||| |||||||| ||||||||||||||||||||| |||||| ||    
T  5025037 aacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcact-atttcaataaaagggaaatagaaaaaataag 5025135  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  5025136 ttagaggggtgattttg 5025152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 10250489 - 10250577
Alignment:
Q  28 gaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||||||| ||| |||||||| ||  |||||||||||||||||||||||||||| |||| |||||||| || ||||||| |||||||||    
T  10250489 gaaatcacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaaaggaattagaaaaacgaattagaggggtgattttg 10250577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 23177567 - 23177677
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttag 103  Q
    ||||||| ||||||| ||||||  ||||||||||||| |||| || ||  |||||||||||||||||||||||| ||||| ||| |||||||  ||||||    
T  23177567 aaaccaaggtcgcactaagacggagaaatcacaaaatgaaaa-cgaaatagatgtgaaaatcacttatttcaat-aaaggaaaagagaaaaactagttag 23177664  T
Q  104 aggagtgattttg 116  Q
    |||||||||||||    
T  23177665 aggagtgattttg 23177677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28015490 - 28015374
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaataga-aaaatgag 99  Q
    |||||| ||| ||||||  ||||||| |||||||||||| ||  |||| ||  |||||| ||||||||||||||||||||||||||||||| ||||  ||    
T  28015490 aacaaaacaaggtcgcattaagacgacgaaatcacaaaaaaaggaacgaaatagatgtgtaaatcacttatttcaataaaagggaaatagaaaaaacaag 28015391  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  28015390 ttagaggggtgattttg 28015374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 33067076 - 33067132
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  33067076 tagggatgacaattggacccaggtccaatgaatacccgcataaaatacccataatgg 33067132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 35135164 - 35135278
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||| ||| ||  |||| ||||||||| |||||||||| ||  |||||||||||||| ||||||||||||| ||||| | ||||| |||     
T  35135164 aacaaaccaacgtcacactaatccgataaaatcacaatataaaaaacgaaatagatgtgaaaatcacgtatttcaataaaaaggaaagataaaaacgagc 35135263  T
Q  101 tagaggagtgatttt 115  Q
    |||| ||| ||||||    
T  35135264 tagaagagcgatttt 35135278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 11001973 - 11001875
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||| ||||||||||| ||||||||||||||||| |   ||  ||||||||||| |||||||||| |||||| |||||||||||| |||| |||    
T  11001973 aaccaacgtctcacgaagacgacgaaatcacaaaataaaacaa--aatagatgtgaaaattacttatttcattaaaagcgaaatagaaaaacgagtaaga 11001876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38649338 - 38649454
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatag-aaaaatgag 99  Q
    |||||| ||| ||| ||| ||||||| || ||||||||| || ||||| ||  |||||| ||||||||||||||||||||||| |||||| |||||| |     
T  38649338 aacaaaacaaggtctcactaagacgacgagatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaaggaaaatagaaaaaataaa 38649437  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  38649438 ttagaggggtgattttg 38649454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29804656 - 29804770
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaact-gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||||| || |||||||| | ||||| ||||||||||||  |||||| ||| | |||||||||||||||||||| |||| |||||||  ||||||| ||     
T  29804656 aacaaaacagcgtcgcactatgacgacgaaatcacaaaaggaaaaacctaattcgatgtgaaaatcacttatttaaatagaagggaaggagaaaaacgat 29804755  T
Q  100 ttagaggagtgattt 114  Q
    ||||||| |||||||    
T  29804756 ttagaggggtgattt 29804770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 12920591 - 12920648
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||    
T  12920591 ctagggatggcaattagacccagatccaatggatacccgcaaaaaatacccacaatgg 12920648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 46918533 - 46918441
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    |||||||||| || |||| |||| || ||||||||||||||||||||  ||  ||||||||||||| |||||||||| ||||||||| ||||||    
T  46918533 aacaaaccaatgttgcacaaagatgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcatttatttcaat-aaagggaaagagaaaa 46918441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 43224838 - 43224782
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  43224838 tagggatgacaattggacccagatccaatggatacctgcataaaatacccacaatgg 43224782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 43702004 - 43702060
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||    
T  43702004 tagggatggcaattagacccaagttcaatggatacccgcataaaatacccacaatgg 43702060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 41748487 - 41748597
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatg--agttagag 105  Q
    ||||||||||| ||||||  |||||||| |||  ||||||| ||  |||||||||||||| ||||| ||||||||| |||||||||||    | ||||||    
T  41748487 caacgtcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacctattttaataaaaggaaaatagaaaaaaacaatttagag 41748586  T
Q  106 gagtgattttg 116  Q
    |||||||||||    
T  41748587 gagtgattttg 41748597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 46181731 - 46181677
Alignment:
Q  219 gggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  46181731 gggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 46181677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 16568087 - 16568031
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||| ||| ||||||||||||||||    
T  16568087 tagggatggcaattggacccagacccaatggatacctgcaaaaaatacccacaatgg 16568031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 16597575 - 16597631
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||| ||| ||||||||||||||||    
T  16597575 tagggatggcaattggacccagacccaatggatacctgcaaaaaatacccacaatgg 16597631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 31455413 - 31455357
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatg 272  Q
    ||||||||| |||||||||||||  |||||| ||||||||| |||||||||||||||    
T  31455413 ctagggatgacaattggacccagacccaatggatacccgcaaaaaatacccacaatg 31455357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 33530456 - 33530564
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    |||||||| || |||||||  ||||||| ||| | |||||| ||  ||||| ||||||||||||||||||||||  |||| ||||||| | ||||||||     
T  33530456 caacgtcgtactaagacgacaaaatcacgaaagagaaaacgaaatagatgtaaaaatcacttatttcaataaaaaagaaaaagaaaaacgggttagaggg 33530555  T
Q  108 gtgattttg 116  Q
    ||| |||||    
T  33530556 gtggttttg 33530564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 36073629 - 36073689
Alignment:
Q  213 catctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||  |||||||||| ||| | ||||||| ||||||||||||||||    
T  36073629 catctagggatggcaattatacccaggtccgatggacacccgcaaaaaatacccacaatgg 36073689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 39415085 - 39415029
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||| |||||||  |||||| ||||||||| ||||||||||||||||    
T  39415085 tagggatggcaattagacccagacccaatggatacccgcaaaaaatacccacaatgg 39415029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 21552443 - 21552549
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    ||||||||||| ||||||| |||||||| ||| ||||| |  | | ||||||||||||| |||||| |||||||| |||  ||||||| || ||||||      
T  21552443 caacgtcgcactaagacgacgaaatcacgaaagaaaaacctaatccgatgtgaaaatcatttatttaaataaaagagaaggagaaaaacgatttagagag 21552542  T
Q  108 gtgattt 114  Q
    |||||||    
T  21552543 gtgattt 21552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 9478082 - 9478026
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||||||||||| ||| || |||||| ||||||||| |||||||||    
T  9478082 tagggatgacaattggacccaggcccagtggatacccacataaaatatccacaatgg 9478026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14707716 - 14707636
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaa 81  Q
    |||||||||||| | ||| |||| || ||||||||||||||||||| | ||  ||||| ||| ||| ||||||||||||||    
T  14707716 aacaaaccaacgccacactaagatgacgaaatcacaaaataaaaaatgaaatagatgttaaattcaattatttcaataaaa 14707636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16263520 - 16263405
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaata-gaaaaatgag 99  Q
    |||||| ||| ||||||| || |||| |||||||||| | || ||||| || | ||||| ||| |||||||||||||||||| |||||| ||||||  ||    
T  16263520 aacaaaacaaggtcgcactaacacgacgaaatcacaacaaaagaaacgaaa-taatgtgtaaaacacttatttcaataaaagagaaataggaaaaacaag 16263422  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||  |||||||||    
T  16263421 ttagagaggtgattttg 16263405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 17171801 - 17171857
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  17171801 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 17171857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 42285025 - 42284969
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| || ||||||||||| ||||||||||||| ||||||||| | |||||||    
T  42285025 tagggatgacatttggacccaggcccaatgaatacccacataaaatagctacaatgg 42284969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 35092330 - 35092389
Alignment:
Q  214 atctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||| | |||| ||||||| ||||| ||| |||||| |||||||||    
T  35092330 atctagggatggcaattgaatccagatccaatggatacctgcaaaaaatatccacaatgg 35092389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 772575 - 772497
Alignment:
Q  2 acaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaa 80  Q
    ||||| ||||||||||| ||||||| |||||||| ||| |||||||  ||  || | ||||||||||||| ||||||||    
T  772575 acaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaaactaaatagaagcgaaaatcacttatatcaataaa 772497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 19805543 - 19805490
Alignment:
Q  220 ggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||  |||||||  |||||||| |||||| |||||||||    
T  19805543 ggatggcaattggacccaaatccaatgggtacccgcaaaaaatatccacaatgg 19805490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 26299953 - 26299904
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaataccc 266  Q
    |||||||||||||||||||||| ||| ||| ||||| ||| |||||||||    
T  26299953 tagggatggcaattggacccagatcctatggatacctgcaaaaaataccc 26299904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3551135 - 3551191
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||||||||||| || |||  |||| ||| ||||||||||||||||    
T  3551135 tagggatgacaattggacccaggcccgatgggtacctgcaaaaaatacccacaatgg 3551191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 21329330 - 21329390
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattt 114  Q
    |||||||||||||||||||| |||| |||||||  || |||| || ||||||| |||||||    
T  21329330 gatgtgaaaatcacttatttaaatagaagggaatgaggaaaacgatttagaggggtgattt 21329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 27399109 - 27399057
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccaca 269  Q
    |||||| ||||||||||||||  ||||||| ||| ||||| ||||||||||||    
T  27399109 tagggacggcaattggacccatatccaatggatatccgcaaaaaatacccaca 27399057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 46783588 - 46783532
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| ||||||||||||| |||||||  || ||||| ||||||| ||||||||    
T  46783588 tagggatgacaattggacccagatccaatgggtatccgcaaaaaatactcacaatgg 46783532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19759921 - 19759806
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  19759921 aacaaaccaacgtcgctcgaagatgacgaaatcacaaaataaaaaacgtaacaaatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagt 19759822  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  19759821 tagaggggtgattttg 19759806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23843405 - 23843510
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23843405 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaaaagatgtgaaaatcacttattttaataaaagggaaatagaaaaacgagt 23843504  T
Q  101 tagagg 106  Q
    ||||||    
T  23843505 tagagg 23843510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20845141 - 20845026
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| |||||||||||| ||  |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  20845141 aacaaaccaatgtcgcacgaagatgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 20845042  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  20845041 tagaggggtgattttg 20845026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13234089 - 13234192
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||| || |    
T  13234089 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaagaaaaacgaat 13234188  T
Q  101 taga 104  Q
    ||||    
T  13234189 taga 13234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 16913457 - 16913348
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||| |||| ||||  |||||| ||||||||    
T  16913457 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaatgaaagtgaaagtgaaaaacgagttaga 16913358  T
Q  105 ggagtgattt 114  Q
    || |||||||    
T  16913357 ggggtgattt 16913348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 548847 - 548961
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| |  ||  |||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  548847 aacaaaccaacattgcacgaagacgatgaaatcacaaaataaaaa-caaaatagatgtgaaaatcgcttatttcaataaaagggaaaaagaaaaacgagt 548945  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  548946 tagaggggtgattttg 548961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32804428 - 32804312
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatag-aaaaatgag 99  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||| || || |||||||||    
T  32804428 aacaaaccaacatctcactaagacgatgaaatcacaaaataaaaaacaaaaaagatgtgaaaatcacttatttcaataaaagggtaagagaaaaaatgag 32804329  T
Q  100 ttagaggagtgattttg 116  Q
    ||||| | |||||||||    
T  32804328 ttagatgggtgattttg 32804312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15128134 - 15128245
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||||| ||     |||||||||||||||||||||| |||||||| ||||||| ||||    
T  15128134 aacaaaccaacgtcgcactaagacgacgaaatcacaaaattaaaaacgaaag----gtgaaaatcacttatttcaatacaagggaaagagaaaaacgagt 15128229  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  15128230 tagaggggtgattttg 15128245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32457779 - 32457664
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| | ||   |||||||| ||||||||||||||||||  |||| ||||||| ||||    
T  32457779 aacaaatcaacgtcgcacgaagacgacgaaatcacaaaataaaaaatgaaatacatgtgaaagtcacttatttcaataaaaatgaaagagaaaaacgagt 32457680  T
Q  101 tagaggagtgattttg 116  Q
    |||| | |||||||||    
T  32457679 tagatgggtgattttg 32457664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 12576465 - 12576572
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||| ||| ||||||| | |||||||||||||||  || ||  |||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  12576465 aaccaacgtcacacaaagacgacggaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaattaaagggaaatagaaaaacaagttaga 12576562  T
Q  105 ggagtgattt 114  Q
    || |||||||    
T  12576563 ggggtgattt 12576572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 7049375 - 7049264
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttag 103  Q
    |||||||||||||||||||| ||  ||||||||||| |||||||  ||  ||| |||||||||||||||||||||||||||||| ||||||||||| | |    
T  7049375 aaaccaacgtcgcacgaagatgacaaaatcacaaaacaaaaaaca-aatagatatgaaaatcacttatttcaataaaagggaaagagaaaaatgagct-g 7049278  T
Q  104 aggagtgattttga 117  Q
    ||| ||||||||||    
T  7049277 aggggtgattttga 7049264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 8633176 - 8633273
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||||||||||||| |||| ||||||||||||||||| |   ||  |||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  8633176 aaccaacgtcgcacgaaaacgacgaaatcacaaaataaaacaa--aatagatgtgaaaatcacttatttcaataaaaggaaaatacaaaaacgagttaga 8633273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 31748087 - 31747986
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttag 103  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||| ||  ||||||||| | |||||||||||| ||| ||||| ||||||| |||||||    
T  31748087 aaaccaatgtcgcacgaagacgtcgaaatcacaaaataaaaaacgaaatagatgtgaaagt-acttatttcaattaaaaggaaagagaaaaacgagttag 31747989  T
Q  104 agg 106  Q
    |||    
T  31747988 agg 31747986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 11426071 - 11425973
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||| ||||||||||| || |||||||||||||||||  || ||  |||||||||||||||||||| |||||||| |||||||||||| |||| |||    
T  11426071 aaccaacatcgcacgaagatgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttaaataaaagagaaatagaaaaacgagtaaga 11425974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 1944228 - 1944113
Alignment:
Q  2 acaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtt 101  Q
    |||||||||||| | ||  ||||||  |||||||||||||||||||  ||   |||  |||||||||||||||||||| ||||||| ||||||| |||||    
T  1944228 acaaaccaacgttgtacttagacgacaaaatcacaaaataaaaaacaaaataaatgcaaaaatcacttatttcaataagagggaaagagaaaaacgagtt 1944129  T
Q  102 agaggagtgattttga 117  Q
    ||||| ||||||||||    
T  1944128 agaggggtgattttga 1944113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 8644367 - 8644264
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtga 111  Q
    ||||||| |||| ||  ||||||||||| |||||||| ||  |||||||||| ||||||||||||||||||||||| |||||||||| || |||  ||||    
T  8644367 gtcgcactaagatgacaaaatcacaaaagaaaaaacgaaatagatgtgaaaaacacttatttcaataaaagggaaagagaaaaatgaatttgagtggtga 8644268  T
Q  112 tttt 115  Q
    ||||    
T  8644267 tttt 8644264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 7808276 - 7808220
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  7808276 tagggatggcaattggacccatgttcaatgaatacccgcataaaatatccacaatgg 7808220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 891701 - 891606
Alignment:
Q  21 agacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||| ||||||||||||||||||||||| ||  || |||||||||| |||||||||||||| | ||| ||||||| |||||| ||| || ||||||    
T  891701 agaccatgaaatcacaaaataaaaaacgaaatagacgtgaaaatcatttatttcaataaaatgaaaacagaaaaacgagttataggggtaattttg 891606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 4663809 - 4663916
Alignment:
Q  9 aacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggag 108  Q
    |||||||||| ||||||| |||||||||||  ||| |||| ||  | |||||||||||||||||| |||||||| |||| | ||||| | |||||||| |    
T  4663809 aacgtcgcactaagacgacgaaatcacaaagaaaacaacgaaatagttgtgaaaatcacttattttaataaaagagaaacataaaaacgtgttagagggg 4663908  T
Q  109 tgattttg 116  Q
    ||||||||    
T  4663909 tgattttg 4663916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33194738 - 33194623
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||| || ||| || |||| ||||||||||||||||||||  ||  ||||||||||| | |||||||||||||  ||||| ||||||| || |    
T  33194738 aacaaaccaacatcacactaacacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaataatttatttcaataaagaggaaagagaaaaacgaat 33194639  T
Q  101 tagaggagtgattttg 116  Q
    |||||  |||||||||    
T  33194638 tagagatgtgattttg 33194623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 31804370 - 31804301
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaa 81  Q
    ||||||| ||||||| |||||||| ||| |||||||| ||  ||||||||||||||||||||||||||||    
T  31804370 gtcgcactaagacgacgaaatcacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 31804301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 20745047 - 20745111
Alignment:
Q  23 acgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaa 87  Q
    ||||||||| |||||||||||||||  ||  ||||||||||||| ||||||||||||||||||||    
T  20745047 acgatgaaagcacaaaataaaaaacaaaatagatgtgaaaatcatttatttcaataaaagggaaa 20745111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 903571 - 903496
Alignment:
Q  20 aagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||||||||||||||||   ||  ||||||||||| |||||||| || |||||||||| |||||||    
T  903571 aagacgatgaaatcacaaaataaaaaataaaatagatgtgaaaattacttatttaaacaaaagggaaagagaaaaa 903496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10744716 - 10744597
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaa---acgtaactgatgtgaaaatcacttatttcaataaaagggaaataga-aaaat 96  Q
    |||||| ||| ||||||| ||||||| |||||||||||| |||||   ||  ||  |||||| ||| ||||||||||||||||| | ||||||| ||||     
T  10744716 aacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaaaaagaaacaaaatagatgtgtaaaccacttatttcaataaaaagaaaatagaaaaaac 10744617  T
Q  97 gagttagaggagtgattttg 116  Q
     |||||||||||||||||||    
T  10744616 aagttagaggagtgattttg 10744597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 28770303 - 28770247
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||   |||||||||||||||| |||||| |||||||||    
T  28770303 tagggatggcaattggacccaaacccaatgaatacccgcaaaaaatatccacaatgg 28770247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 33329109 - 33329053
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| |||||||||| |||||    
T  33329109 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccataatgg 33329053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 33332121 - 33332065
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| |||||||||| |||||    
T  33332121 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccataatgg 33332065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 12652188 - 12652275
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||  ||||||||||||| || ||| ||||  || ||  ||||||||||||||||||||||||||| || ||| |||||||    
T  12652188 caacgtcgcaataagacgatgaaataacgaaagaaaaggcgaaatagatgtgaaaatcacttatttcaataaatggaaaagagaaaaa 12652275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 31071303 - 31071246
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   ||||||  |||||||| ||||||||||||||||    
T  31071303 ctagggatggcaattggacccaaacccaatgggtacccgcaaaaaatacccacaatgg 31071246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 1221295 - 1221351
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  1221295 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 1221351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5417179 - 5417223
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaa 45  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||    
T  5417179 aacaaaccaacgtcgcacaaagacgacgaaatcacaaaatgaaaa 5417223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 24446702 - 24446758
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  24446702 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 24446758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 33541563 - 33541623
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattt 114  Q
    |||||||||||||||||||| |||| |||||||  ||||||| || ||||||| |||||||    
T  33541563 gatgtgaaaatcacttatttaaatagaagggaaggagaaaaacgatttagaggggtgattt 33541623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5544840 - 5544759
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagg 83  Q
    |||||| |||| |||||| | ||||||||||| |||||||| |||||| ||   |||| || |||||||||||||||||||||    
T  5544840 aacaaatcaacatcgcactaggacgatgaaataacaaaata-aaaacgaaatatatgtaaatatcacttatttcaataaaagg 5544759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 13532530 - 13532584
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    |||||||| ||||| |||||||  |||||| ||||||||| ||||||||||||||    
T  13532530 tagggatgacaattagacccagacccaatggatacccgcaaaaaatacccacaat 13532584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 6337707 - 6337650
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||| |||||||| ||||  |||||| ||||||||| |||| |||||||||||    
T  6337707 ctagggatgacaattggatccagacccaatggatacccgcaaaaaaaacccacaatgg 6337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 1329158 - 1329214
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||| |||||    ||||| ||||||||| ||||||||||||||||    
T  1329158 tagggatggcaattgaacccatactcaatggatacccgcaaaaaatacccacaatgg 1329214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5507 - 5608
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  5507 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacataacagatgtgaaaatcacttatttcaataaaagagaaatagaaaaacgagt 5606  T
Q  101 ta 102  Q
    ||    
T  5607 ta 5608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1165377 - 1165492
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| |||||||  |||    
T  1165377 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaagaaaaacaagt 1165476  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  1165477 tagaggggtgattttg 1165492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 14741310 - 14741421
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  14741310 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagttaga 14741409  T
Q  105 ggagtgattttg 116  Q
    |  |||||||||    
T  14741410 gaggtgattttg 14741421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43029816 - 43029701
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||  ||||||  |||    
T  43029816 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacaagt 43029717  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  43029716 tagaggggtgattttg 43029701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 47914578 - 47914708
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||| ||||||||||| ||||| | ||||| ||||||||    
T  47914578 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttttttcaataaaatggaaaga-aaaaacgagttaga 47914676  T
Q  105 ggagtgatt---ttgaccctaaatcacccctc 133  Q
    || ||||||   ||||||||||||||||||||    
T  47914677 ggggtgattttattgaccctaaatcacccctc 47914708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 3088648 - 3088758
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||| ||||||||||| || |||||    
T  3088648 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtg-aaatcacttatttcaataaaaggaaaatagaaaaacgaattaga 3088746  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  3088747 ggggtgattttg 3088758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21803663 - 21803548
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||| ||  |||||||||||||||| |||||||||||| |||| ||||||| ||||    
T  21803663 aacaaaccaatgtcgcacgaagactacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttgtttcaataaaagagaaagagaaaaacgagt 21803564  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  21803563 tagaggggtgattttg 21803548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29182589 - 29182704
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||  ||  ||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  29182589 aacaaaccaacgtcacacgaagacgacgaaatcacaaaataaaaaacaaaatagatatgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 29182688  T
Q  101 tagaggagtgattttg 116  Q
    ||||||  ||||||||    
T  29182689 tagagggatgattttg 29182704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43839499 - 43839604
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||  ||||    
T  43839499 aacaaaccaacatcgcacgaagatgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaagcgagt 43839598  T
Q  101 tagagg 106  Q
    ||||||    
T  43839599 tagagg 43839604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20201039 - 20201154
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| |||||||||| |||| ||||||| ||||||||||||  ||  ||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  20201039 aacaaaccaatgtcgcacgaaaacgacgaaatcataaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagtgaaagagaaaaacgagt 20201138  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  20201139 tagaggggtgattttg 20201154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20203221 - 20203336
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| |||||||||| |||| ||||||| ||||||||||||  ||  ||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  20203221 aacaaaccaatgtcgcacgaaaacgacgaaatcataaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagtgaaagagaaaaacgagt 20203320  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  20203321 tagaggggtgattttg 20203336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 41882394 - 41882504
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  41882394 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaa-tcacttatttcaatacaagggaaatagaaaaacgagttaga 41882492  T
Q  105 ggagtgattttg 116  Q
    || || ||||||    
T  41882493 ggggtaattttg 41882504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 29776671 - 29776801
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||| |||||||||| |||| ||  ||||||||||||||||| || ||  |||||||||| ||||||||||| |||| |||||| ||||||| ||||    
T  29776671 aacaaacaaacgtcgcacaaagatgacaaaatcacaaaataaaaa-cgaaatagatgtgaaaaccacttatttcagtaaa-gggaaagagaaaaacgagt 29776768  T
Q  101 tagaggagtgattttgaccctaaatcacccctc 133  Q
    |||||| ||||||||||||||||||||||||||    
T  29776769 tagaggggtgattttgaccctaaatcacccctc 29776801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 35501740 - 35501855
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||| |||||| || ||||||||  |||||||||||||||||||| ||  ||||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  35501740 aacaaactaacgtcacatgaagacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcatttatttcagtaaaagggaaagagaaaaacgagt 35501839  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  35501840 tagaggggtgattttg 35501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 22286735 - 22286844
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||  |||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  22286735 aaccaacgtcgcgcgaagacgacgaaatcacaaaataaaaaacgaaatagatgtg-aaattacttatttcaataaaaggaaaatagaaaaacgagttaga 22286833  T
Q  105 ggagtgatttt 115  Q
    || || |||||    
T  22286834 ggggtaatttt 22286844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25374051 - 25374165
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| ||||||| ||||||  ||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||| ||| ||||||| ||||    
T  25374051 aacaaaccaaagtcgcactaagacggagaaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaagaaaaggaaaagagaaaaacgagt 25374150  T
Q  101 tagaggagtgatttt 115  Q
    |||||| ||||||||    
T  25374151 tagaggggtgatttt 25374165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 28995293 - 28995391
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||||||||||||||||||  ||||||||||||||||  || ||  |||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  28995293 aaccaacgtcgcacgaagacgacaaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagtaaga 28995390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 33076434 - 33076330
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtga 111  Q
    |||||||||| ||||  |||||||||||||||||||| ||  ||||| |||||||||||||||||||||||| ||| || ||||||||||||||| ||||    
T  33076434 gtcgcacgaaaacgacaaaatcacaaaataaaaaacgaaatagatgtaaaaatcacttatttcaataaaaggaaaagaggaaaatgagttagaggggtga 33076335  T
Q  112 ttttg 116  Q
    |||||    
T  33076334 ttttg 33076330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 33977909 - 33977997
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||||||||||||||||||||||||||||| |   ||  ||||| ||||||||||||||||||||||||||||||||||||    
T  33977909 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaacaa--aatagatgtaaaaatcacttatttcaataaaagggaaatagaaaaa 33977997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 50519901 - 50519808
Alignment:
Q  22 gacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    ||||| ||||||| ||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  50519901 gacgacgaaatcaaaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttg 50519808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 39340330 - 39340201
Alignment:
Q  3 caaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtta 102  Q
    |||| ||| ||||||| |||||| | ||||||| ||| |||||||| ||  |||||||||||||||||||||||||||| | ||| |||||||  |||||    
T  39340330 caaaacaaagtcgcactaagacggtaaaatcacgaaagaaaaaacggaatagatgtgaaaatcacttatttcaataaaaagaaaagagaaaaacaagtta 39340231  T
Q  103 gaggagtgattttgaccctaaatcacccct 132  Q
    ||||  ||||||||||||||||||| ||||    
T  39340230 gagggatgattttgaccctaaatcatccct 39340201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54240219 - 54240150
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcactta 70  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||    
T  54240219 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcactta 54240150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 2598197 - 2598101
Alignment:
Q  20 aagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    |||| ||||||||||||||| |||||| | ||  ||||||||||||| |||||||||||||||  ||| | ||||| ||||||||||||||||||||    
T  2598197 aagatgatgaaatcacaaaagaaaaaatggaatagatgtgaaaatcagttatttcaataaaagcaaaagataaaaacgagttagaggagtgattttg 2598101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20251790 - 20251670
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaa-----taaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||||||||||||||||||  |||||||||||     |||||||   ||  ||| |||||||||||||||||||| ||||||||| |||||||    
T  20251790 aacaaaccaacgtcgcacgaagacgacaaaatcacaaaacaaaataaaaaagaaaatagatatgaaaatcacttatttcaatcaaagggaaagagaaaaa 20251691  T
Q  96 tgagttagaggagtgattttg 116  Q
     |||||||| | |||||||||    
T  20251690 cgagttagaagggtgattttg 20251670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 32089922 - 32090014
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||| ||||||| ||||||||||||||||||| | ||  ||||||||||||||||||||||||||||  ||   ||||||||||||||||    
T  32089922 gtcgcactaagacgacgaaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaaaagattgagaaaaatgagttaga 32090014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 11672242 - 11672183
Alignment:
Q  214 atctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  11672242 atctagggatggcaattggacccaggcccaatggatacccacataaaatacccacaatgg 11672183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 34767115 - 34766998
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaa------aacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatg 97  Q
    |||||||| |||||| ||||||| || ||||||||||||||      |||| ||   ||||||||||||||||||||||||||||||||| ||||||| |    
T  34767115 aaaccaacatcgcacaaagacgacgagatcacaaaataaaataaaataacgaaataaatgtgaaaatcacttatttcaataaaagggaaagagaaaaacg 34767016  T
Q  98 agttagaggagtgattttg 116  Q
    ||||||||| |||||||||    
T  34767015 agttagagg-gtgattttg 34766998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40461976 - 40462091
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| |||| |||||| |||||||  ||||||||||||||||| || ||  ||||| |||| | | ||||||||||||||||||| |||||||  |||    
T  40461976 aacaaatcaacatcgcactaagacgacaaaatcacaaaataaaaaccgaaatagatgtaaaaaccgcgtatttcaataaaagggaaagagaaaaacaagt 40462075  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  40462076 tagaggggtgattttg 40462091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 26412443 - 26412349
Alignment:
Q  23 acgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttga 117  Q
    ||||||||||||||||| ||| |||| ||  |||||||||||| ||||||||||||||||||| | ||||||| || ||||||  ||||||||||    
T  26412443 acgatgaaatcacaaaagaaagaacgaaatagatgtgaaaatcgcttatttcaataaaagggagagagaaaaacgacttagagatgtgattttga 26412349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22893696 - 22893810
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaat-aaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgag 99  Q
    |||||||||||||||||| |||| || ||||||||||||| |||||||| ||  | |||||||||||||||||  ||||||||||||  |||||||  ||    
T  22893696 aacaaaccaacgtcgcactaagaagacgaaatcacaaaataaaaaaacgaaataggtgtgaaaatcacttattctaataaaagggaa--agaaaaacaag 22893793  T
Q  100 ttagaggagtgattttg 116  Q
    ||||| | |||||||||    
T  22893794 ttagaagggtgattttg 22893810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 5040653 - 5040709
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  5040653 tagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgg 5040709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 25467999 - 25467943
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  25467999 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaatgg 25467943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 53426923 - 53426822
Alignment:
Q  9 aacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggag 108  Q
    |||||||||| ||||||| |||||||||||| |||||| | ||  ||||||||||||||||||||||||      |||| ||||||| |||||||||| |    
T  53426923 aacgtcgcactaagacgacgaaatcacaaaagaaaaaatgaaatagatgtgaaaatcacttatttcaat------gaaagagaaaaacgagttagagggg 53426830  T
Q  109 tgattttg 116  Q
    ||||||||    
T  53426829 tgattttg 53426822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 21586025 - 21585950
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagg 83  Q
    ||||||| ||| |||| || ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||    
T  21586025 caacgtcacactaagatgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagg 21585950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 36540656 - 36540746
Alignment:
Q  3 caaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    |||| ||||||||||| ||||||| |||||||| ||| ||||| |  ||   ||||||||||||||||||||||||||||||||||||||||    
T  36540656 caaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaa-caaaataaatgtgaaaatcacttatttcaataaaagggaaatagaaaa 36540746  T

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Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 42106238 - 42106151
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||| ||||||  |||||||  |||  ||||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  42106238 caacgtcgcactaagacggcgaaatcaggaaagcaaaaacgaaatatatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 42106151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 45664351 - 45664247
Alignment:
Q  4 aaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttag 103  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||| ||  |||||||||||||||        |||||| |||||||||||| |||||||    
T  45664351 aaacgaacgtagcacgaagacaacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcact--------taaaagagaaatagaaaaacgagttag 45664260  T
Q  104 aggagtgattttg 116  Q
    ||| |||||||||    
T  45664259 aggggtgattttg 45664247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32237977 - 32238070
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||| |||||| |||| ||  |||||||||||||||||| | ||  ||| |||||||||||||||||||| ||||||||| |||||||    
T  32237977 aacaaaccaacatcgcacaaagatgacaaaatcacaaaataaaaaatgaaatagatatgaaaatcacttatttcaat-aaagggaaagagaaaaa 32238070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 1220255 - 1220312
Alignment:
Q  60 aaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttga 117  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||||    
T  1220255 aaaatcacttatttcaacaaaagggaaagagaaaaacgagttagaggggtgattttga 1220312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27831245 - 27831168
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaata 78  Q
    |||||||||||||||||| ||||| |  |||||||||||| ||||||| ||  |||||||||| ||||||||||||||    
T  27831245 aacaaaccaacgtcgcactaagacaaaaaaatcacaaaatcaaaaacggaatagatgtgaaaaacacttatttcaata 27831168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40797166 - 40797050
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaataga-aaaatgag 99  Q
    |||||| ||| ||| ||| ||||||  |||||||  |||  ||||||| ||  ||||||||||||| |||||||||||||||||||||||| ||||  ||    
T  40797166 aacaaaacaatgtctcactaagacggcgaaatcatgaaagcaaaaacgaaatagatgtgaaaatcatttatttcaataaaagggaaatagaaaaaacaag 40797067  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  40797066 ttagaggggtgattttg 40797050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 44792236 - 44792292
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  44792236 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 44792292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 913324 - 913391
Alignment:
Q  28 gaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||| |||  ||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||    
T  913324 gaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacttatttcaaaaaaagggaaatagaaaaa 913391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 49360464 - 49360405
Alignment:
Q  214 atctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||||| |||||||  |||||||| |||||| |||||||||    
T  49360464 atctagggatggcaattggacccagatccaatgggtacccgcaaaaaatatccacaatgg 49360405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 50508489 - 50508543
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    ||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||    
T  50508489 tagggatggcaattggacccagacccaatggatacccgtataaaatacccacaat 50508543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22844185 - 22844069
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaa-aatgag 99  Q
    |||||| ||| ||||||| |||||||||||||||| ||| ||||||   ||  |||| |||||||| |||||||||||||||  || || ||| || |||    
T  22844185 aacaaaacaatgtcgcactaagacgatgaaatcacgaaagaaaaaataaaatagatgcgaaaatcatttatttcaataaaagataattaaaaagaacgag 22844086  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  22844085 ttagaggggtgattttg 22844069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 23297926 - 23297982
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| ||||| ||||||||| ||||| ||||| ||||||||||||||||||||    
T  23297926 tagggatgacaattagacccaggttcaatggataccagcataaaatacccacaatgg 23297982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 41924479 - 41924423
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||| |||| | ||||| ||||||||| ||||||||||||||||    
T  41924479 tagggatggcaattggatccagattcaatggatacccgcaaaaaatacccacaatgg 41924423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 48080552 - 48080498
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    |||||||| |||||||||| ||| |||||| ||||| ||||||||||||||||||    
T  48080552 tagggatgtcaattggacctaggaccaatggataccagcataaaatacccacaat 48080498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 13735241 - 13735298
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||| |||||||||||||||||| |||||||  |||||||| |||||| |||||||||    
T  13735241 ctagagatggcaattggacccagatccaatgggtacccgcaaaaaatatccacaatgg 13735298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 39953006 - 39952957
Alignment:
Q  224 ggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||||||    
T  39953006 ggcaattgaactcaggctcaatgaatacccgcataaaatacccacaatgg 39952957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40365359 - 40365290
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcactta 70  Q
    |||||||||||||||||  |||| ||  |||||||||||||||||||  ||  |||||||||||||||||    
T  40365359 aacaaaccaacgtcgcattaagatgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcactta 40365290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 50460272 - 50460231
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  50460272 gatgtgaaaatcacttatttcaataaaagagaaagagaaaaa 50460231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 19619195 - 19619139
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  ||||||  ||||| || ||||||||||||||||    
T  19619195 tagggatggcaattggacccagacccaatgggtacccacaaaaaatacccacaatgg 19619139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 24987005 - 24987061
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||| ||||||||||||||||   |||||| ||||||||| ||||||||||||||||    
T  24987005 taggaatggcaattggacccaaacccaatggatacccgcaaaaaatacccacaatgg 24987061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 50480671 - 50480723
Alignment:
Q  221 gatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||| ||||||| |||||| || |||||| |||||||||    
T  50480671 gatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgg 50480723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 31628949 - 31629042
Alignment:
Q  20 aagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattt 114  Q
    |||| ||||||||||||||| |||||||  ||   |||| |||||||||||||| ||||||| ||||  |||||||||| | |||| ||||||||    
T  31628949 aagaagatgaaatcacaaaagaaaaaactaaataaatgttaaaatcacttattt-aataaaaaggaagaagaaaaatgattaagagaagtgattt 31629042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 25939460 - 25939541
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaag 82  Q
    |||||| |||||||||||  |||| | |||||||| ||| |||||||  ||  ||||||||||| |||||||| ||||||||    
T  25939460 aacaaaacaacgtcgcactgagacaacgaaatcacgaaagaaaaaacagaatagatgtgaaaataacttatttgaataaaag 25939541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 50809314 - 50809258
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| | |||||  |||| ||| ||||||| ||||||||    
T  50809314 tagggatggcaattggacccagattcaatgggtacctgcaaaaaatactcacaatgg 50809258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 50866548 - 50866604
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| | |||||  |||| ||| ||||||| ||||||||    
T  50866548 tagggatggcaattggacccagattcaatgggtacctgcaaaaaatactcacaatgg 50866604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1122 - 1238
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1122 aacaaaccaacgtcgcactaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagt 1221  T
Q  101 tagaggagtgattttga 117  Q
    |||| || |||||||||    
T  1222 tagatgattgattttga 1238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 28618732 - 28618622
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  28618732 aaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttaga 28618634  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  28618633 ggggtgattttg 28618622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31645962 - 31645847
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||  ||||||  |||    
T  31645962 aacaaaccaacgtcgcacgaagacgaagaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacaagt 31645863  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  31645862 tagaggggtgattttg 31645847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 4726913 - 4727010
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtta 102  Q
    ||||||| |||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4726913 aaccaacatcgcacgaagacgacgaaatcacaaaataagaaatgtaacagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagtta 4727010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5378435 - 5378322
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||| | |||  || |||||||||||||||||||||||||||||||||||||| ||||    
T  5378435 aacaaaccaatttcgcacgaagacgacgaaatcacaaaataaaaaatgcaacaaatatgaaaatcacttatttcaataaaagggaaatagaaaaacgagt 5378336  T
Q  101 tagaggagtgattt 114  Q
    |||||| |||||||    
T  5378335 tagaggggtgattt 5378322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41063377 - 41063493
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||||| ||  ||||||||||||| |||||||||||||| ||||| ||||||| ||||    
T  41063377 aacaaaccaacgtcatacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcatttatttcaataaaatggaaagagaaaaacgagt 41063476  T
Q  101 tagaggagtgattttga 117  Q
    |||| ||||||||||||    
T  41063477 tagatgagtgattttga 41063493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6887159 - 6887274
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||  ||  ||||||||||||||||||||||||||||||||||  ||||||  |||    
T  6887159 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaagaaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacaagt 6887258  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  6887259 tagaggggtgattttg 6887274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19646022 - 19646137
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||  ||| ||||| |||||||| |||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  19646022 aacaaactgacgccgcacaaagacgataaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcattaaaagggaaagagaaaaatgagt 19646121  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  19646122 tagaggggtgattttg 19646137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 28500837 - 28500736
Alignment:
Q  14 cgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgatt 113  Q
    ||||| ||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  28500837 cgcactaagacgaagaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaaagagttaaaggagtgatt 28500738  T
Q  114 tt 115  Q
    ||    
T  28500737 tt 28500736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29310335 - 29310445
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||      ||||||||||||||||||||||||||||||||||   |||||  |||    
T  29310335 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaaca-----gatgtgaaaatcacttatttcaataaaagggaaaagaaaaaacaagt 29310429  T
Q  101 tagaggagtgattttg 116  Q
    |||||| |||||||||    
T  29310430 tagaggggtgattttg 29310445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 4070681 - 4070572
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    ||||||||||||||||| |||| |||||||||||||||||  || ||   ||||||||||||||||||||||||||| ||||||||||||| |||| |||    
T  4070681 aaccaacgtcgcacgaatacgacgaaatcacaaaataaaa--cgaaataaatgtgaaaatcacttatttcaataaaaaggaaatagaaaaacgagtcaga 4070584  T
Q  105 ggagtgattttg 116  Q
    || |||||||||    
T  4070583 ggggtgattttg 4070572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2415533 - 2415418
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||| | ||   || |||||||||||||||||||||||||||||| |||||||  |||    
T  2415533 aacaaaccaacgtcgcatgaagacgacaaaatcacaaaataaaaaatgaaatatatatgaaaatcacttatttcaataaaagggaaaaagaaaaacaagt 2415434  T
Q  101 tagaggagtgattttg 116  Q
    |||| | |||||||||    
T  2415433 tagaagggtgattttg 2415418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 32390632 - 32390731
Alignment:
Q  5 aaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttaga 104  Q
    |||||||||||||| || | || ||||||||||||||||||||| ||  |||||||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  32390632 aaccaacgtcgcactaatatgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaaaggaaagagaaaaacgagttaga 32390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 15710668 - 15710560
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    ||||||||||| |||| ||  ||||||  ||| |||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||||     
T  15710668 caacgtcgcactaagatgacaaaatcatgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaacgagttagaggg 15710569  T
Q  108 gtgattttg 116  Q
    |||||||||    
T  15710568 gtgattttg 15710560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10924114 - 10924188
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttca 75  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||| ||||||||||||||||    
T  10924114 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtaaaaatcacttatttca 10924188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33486550 - 33486644
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||| ||| ||||||| ||||||| |||||||||||| || ||||| ||  |||||| |||||||||||||||||||||||||||||||||||    
T  33486550 aacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaagggaaatagaaaaa 33486644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9034923 - 9035045
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaat------aaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||      |||||| | ||  ||||||||  |||||||||| ||||||| ||||| ||||||    
T  9034923 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaaaaaaaatgaaatagatgtgaatgtcacttattttaataaaatggaaagagaaaa 9035022  T
Q  95 atgagttagaggagtgattttga 117  Q
    | ||||||||||  |||||||||    
T  9035023 acgagttagagggatgattttga 9035045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 35906423 - 35906344
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaa 87  Q
    ||||||||||| ||||||| ||||| ||||||||||||||  || ||| |||||||||||||||||||||||||||||||    
T  35906423 caacgtcgcacaaagacgacgaaattacaaaataaaaaacaaaattgacgtgaaaatcacttatttcaataaaagggaaa 35906344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 6647904 - 6648009
Alignment:
Q  11 cgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaa-tcacttatttcaataaaagggaaatagaaaaatgagttagaggagt 109  Q
    |||||||| ||||||| |||||||| ||| |||||||| || | |||| |||| ||||||||||||||||||||||||  |||||| |||||||||||||    
T  6647904 cgtcgcactaagacgacgaaatcacgaaagaaaaaacgaaa-taatgtaaaaaatcacttatttcaataaaagggaaagcgaaaaacgagttagaggagt 6648002  T
Q  110 gattttg 116  Q
    |||||||    
T  6648003 gattttg 6648009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 34893904 - 34894012
Alignment:
Q  8 caacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagga 107  Q
    ||||||||||| |||||||  |||||||||||||||||| | ||  ||| ||||||| ||||||||||||| || | ||| ||||||| ||||||||||     
T  34893904 caacgtcgcacaaagacgacaaaatcacaaaataaaaaatgaaatagatatgaaaattacttatttcaatataaagaaaagagaaaaacgagttagaggg 34894003  T
Q  108 gtgattttg 116  Q
    |||||||||    
T  34894004 gtgattttg 34894012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37425129 - 37425011
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaataga---aaaatg 97  Q
    |||||| ||||||||||| |||||||  ||||||| ||| |||||||   |  |||||||||||||||||||||||||||||||||||| |   |||| |    
T  37425129 aacaaaacaacgtcgcacaaagacgacaaaatcacgaaagaaaaaacaacatagatgtgaaaatcacttatttcaataaaagggaaatatatataaaacg 37425030  T
Q  98 agttagaggagtgattttg 116  Q
    ||||||||| |||||||||    
T  37425029 agttagaggcgtgattttg 37425011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 41554609 - 41554504
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaataga-aaaatgagttagaggagtg 110  Q
    ||||||| ||||||| |||||||| | | || ||||| ||  |||||| ||||||||||||||||||||||||||||||| ||||  ||||||||| |||    
T  41554609 gtcgcactaagacgacgaaatcactacaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaagggaaatagaaaaaacaagttagaggggtg 41554510  T
Q  111 attttg 116  Q
    ||||||    
T  41554509 attttg 41554504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8812132 - 8812248
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatga-g 99  Q
    |||||| ||||||||||| ||||||  |||||||| |||  ||||||| ||  ||| ||||||||||||| |||||||||| |||||||||||||  | |    
T  8812132 aacaaaacaacgtcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatatgaaaatcacttacttcaataaaaaggaaatagaaaaaacatg 8812231  T
Q  100 ttagaggagtgattttg 116  Q
    ||||||| |||||||||    
T  8812232 ttagaggggtgattttg 8812248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 18595874 - 18595818
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  18595874 tagggatggcaattggacccaggcccaatggatacccgcataaaatactcacaatgg 18595818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 29456304 - 29456248
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  29456304 tagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgg 29456248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 34844038 - 34843934
Alignment:
Q  12 gtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtga 111  Q
    ||||||| | |||||  ||||||||||| |||||||  ||  |||||||||||| |||||||||||||||||||||||| |||||  |||||||  ||||    
T  34844038 gtcgcactaggacgacaaaatcacaaaagaaaaaacaaaatagatgtgaaaatcgcttatttcaataaaagggaaataggaaaataggttagagaggtga 34843939  T
Q  112 ttttg 116  Q
    |||||    
T  34843938 ttttg 34843934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 34866552 - 34866456
Alignment:
Q  9 aacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagag 105  Q
    |||||||||| ||||||| |||||||| ||| |||||||| ||  ||| ||||| || |||||||||||||||| |||| ||||||| |||||||||    
T  34866552 aacgtcgcactaagacgacgaaatcacgaaagaaaaaacgaaatagatatgaaactcgcttatttcaataaaagagaaagagaaaaacgagttagag 34866456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22397529 - 22397622
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||| ||||||||||| ||||||| |||||||||||| ||||| || ||  ||||||||||| |||||||| ||| ||||| |||||||||||    
T  22397529 aacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaaaaccgaaatagatgtgaaaattacttattttaat-aaaggaaaatagaaaaa 22397622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28423784 - 28423870
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaa 87  Q
    |||||||||| ||| || || ||||| ||||||||||||||||||||| ||  ||| | ||||||| ||||||||||||||||||||    
T  28423784 aacaaaccaatgtcacaagatgacgacgaaatcacaaaataaaaaacgaaatagatataaaaatcatttatttcaataaaagggaaa 28423870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 14910698 - 14910739
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14910698 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 14910739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41358172 - 41358067
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||| ||| ||||||| |||||||  ||||||| ||  |||||| | ||  ||||||||||| |||||||||||||||||| ||| ||||||| ||||    
T  41358172 aacaaaacaatgtcgcactaagacgacaaaatcacgaaggaaaaaatgaaatagatgtgaaaataacttatttcaataaaaggaaaagagaaaaacgagt 41358073  T
Q  101 tagagg 106  Q
    ||||||    
T  41358072 tagagg 41358067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 7978545 - 7978489
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||| |||||||||||||| |||||  ||||||||||||||||||||||||||    
T  7978545 tagggatgacaattggacccaggcccaattgatacccgcataaaatacccacaatgg 7978489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 14645830 - 14645774
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  14645830 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgg 14645774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 31149295 - 31149352
Alignment:
Q  216 ctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||| |||||||||||||  |||||| ||||||| ||||||||||||||||||    
T  31149295 ctagggatgacaattggacccagacccaatggatacccgtataaaatacccacaatgg 31149352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 41988258 - 41988201
Alignment:
Q  60 aaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttga 117  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||| | ||||||||    
T  41988258 aaaatcacttatttcaacaaaagggaaagagaaaaacgagttagaggggcgattttga 41988201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 15718791 - 15718847
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||| || | ||||| ||||||||| ||||||||||||||||    
T  15718791 tagggatggcaattggacctagattcaatggatacccgcaaaaaatacccacaatgg 15718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 41617090 - 41617034
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||| ||||  |||||| ||||||||| ||||||||||||||||    
T  41617090 tagggatggcaattggatccagacccaatggatacccgcaaaaaatacccacaatgg 41617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 29154334 - 29154272
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttga 117  Q
    ||||||||||||||||||||||||||||| |||| | |||||  ||||||||| ||||||||||    
T  29154334 gatgtgaaaatcacttatttcaataaaagagaaaga-aaaaacaagttagaggggtgattttga 29154272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 13007761 - 13007724
Alignment:
Q  58 tgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||||||||||||||||||| |||||||    
T  13007761 tgaaaatcacttatttcaataaaagggaaagagaaaaa 13007724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 13079214 - 13079177
Alignment:
Q  58 tgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||||||||||||||||||| |||||||    
T  13079214 tgaaaatcacttatttcaataaaagggaaagagaaaaa 13079177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 18472725 - 18472821
Alignment:
Q  20 aagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatag-aaaaatgagttagaggagtgattttg 116  Q
    ||||||| |||||||||||| || ||||  ||  |||||| |||||||||||| |||||||||| |||||| |||||  ||||||||| |||||||||    
T  18472725 aagacgacgaaatcacaaaa-aagaaacaaaatagatgtgtaaatcacttattgcaataaaaggaaaatagaaaaaacaagttagaggggtgattttg 18472821  T

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Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 1061474 - 1061418
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| | ||||   |||||||| ||||||||||||||||    
T  1061474 tagggatggcaattggacccagattcaataggtacccgcaaaaaatacccacaatgg 1061418  T

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Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 6074770 - 6074822
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagagg 106  Q
    |||||||||||||||||||| ||||||||||||  ||||||| || |||||||    
T  6074770 gatgtgaaaatcacttatttaaataaaagggaaggagaaaaacgatttagagg 6074822  T

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Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 34718365 - 34718421
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  34718365 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 34718421  T

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Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 41692049 - 41692105
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  41692049 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 41692105  T

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Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 34873931 - 34873880
Alignment:
Q  64 tcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgatttt 115  Q
    ||||||||||||||||||||||||  |||||| |||||||| | ||||||||    
T  34873931 tcacttatttcaataaaagggaaactgaaaaacgagttagaagggtgatttt 34873880  T

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Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 10937948 - 10937895
Alignment:
Q  218 agggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    |||||||||||||| ||||||| || |||  |||||||| ||||||||||||||    
T  10937948 agggatggcaattgaacccaggcccgatgggtacccgcaaaaaatacccacaat 10937895  T

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Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 13080222 - 13080185
Alignment:
Q  58 tgaaaatcacttatttcaataaaagggaaatagaaaaa 95  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  13080222 tgaaaatcacttatttcaataaaaggaaaagagaaaaa 13080185  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 17326211 - 17326271
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattt 114  Q
    |||||||||||||||||||| |||| |||| ||  ||||||| || ||||||| |||||||    
T  17326211 gatgtgaaaatcacttatttaaatagaaggcaaggagaaaaacgatttagaggggtgattt 17326271  T

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Target: scaffold0024 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36662 - 36548
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||   ||  ||||||||||||||||||||||||||||||||||  |||||| ||||    
T  36662 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaataaaatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacgagt 36563  T
Q  101 tagaggagtgatttt 115  Q
    |||| | ||||||||    
T  36562 tagaagggtgatttt 36548  T

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Target: scaffold0316 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12184 - 12288
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||  | |||||||||||||||||||||||||||||||| |||| || |||     
T  12184 aacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaataggtgtgaaaatcacttatttcaataaaagggaaagagaagaacgagc 12283  T
Q  101 tagag 105  Q
    |||||    
T  12284 tagag 12288  T

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Target: scaffold0340 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 11761 - 11873
Alignment:
Q  3 caaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagtta 102  Q
    |||| |||| |||||| |||||||||||||||| ||| ||||| || ||  |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11761 caaaacaacttcgcactaagacgatgaaatcacgaaagaaaaa-cgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaacgagtta 11859  T
Q  103 gaggagtgattttg 116  Q
    || |||||||||||    
T  11860 gatgagtgattttg 11873  T

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Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 244769 - 244656
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||| |||||||||||||||  |||||||||| ||||||||| ||  |||||||||||||||||||||||||||| | ||| ||||||| ||||    
T  244769 aacaaaccaaggtcgcacgaagacgacaaaatcacaaactaaaaaacgaaatagatgtgaaaatcacttatttcaataaaaagaaaagagaaaaacgagt 244670  T
Q  101 tagaggagtgattt 114  Q
    |||||| |||||||    
T  244669 tagaggggtgattt 244656  T

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Target: scaffold0018 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 137039 - 137143
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatag-aaaaatgag 99  Q
    |||||| |||||||| || ||||||| |||||||||||| |||||||| ||  ||||| |||||||||||||||| |||||||||||||| |||||||||    
T  137039 aacaaaacaacgtcgtactaagacgacgaaatcacaaaagaaaaaacgaaatagatgttaaaatcacttatttcattaaaagggaaatagaaaaaatgag 137138  T
Q  100 ttaga 104  Q
    |||||    
T  137139 ttaga 137143  T

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Target: scaffold0045 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 9682 - 9744
Alignment:
Q  54 gatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagaggagtgattttg 116  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  9682 gatgtgaaaatcacttaattcaataaaagggaaatagaaaaacgagttagaggagtgattttg 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11147 - 11038
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagt 100  Q
    |||||||||||||||||||||    | ||||||||||||||||||  | ||  | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  11147 aacaaaccaacgtcgcacgaa----acgaaatcacaaaataaaaacag-aatagctgtgaaaatcacttatttcaataagagggaaaaagaaaaatgagt 11053  T
Q  101 tagaggagtgatttt 115  Q
    |||||| ||||||||    
T  11052 tagaggggtgatttt 11038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 250731 - 250677
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaat 271  Q
    |||||||| |||||||||||||| |||||| | ||||||| ||||||||| ||||    
T  250731 tagggatgacaattggacccaggcccaatggacacccgcaaaaaatacccgcaat 250677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 240061 - 240120
Alignment:
Q  214 atctagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||||| ||||||| |||||| || |||||| |||||||||    
T  240061 atctagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgg 240120  T

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Target: scaffold0164 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 6706 - 6762
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| |||||||  |||||||| |||||| |||||||||    
T  6706 tagggatggcaattggacccagctccaatgggtacccgcaaaaaatatccacaatgg 6762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 14587 - 14643
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    |||||||||||||||||||||| |||||||  |||||||| |||||| |||||||||    
T  14587 tagggatggcaattggacccagctccaatgggtacccgcaaaaaatatccacaatgg 14643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1108 - 1154
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaac 47  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||    
T  1108 aacaaaccaacgtcacacgaagatgacgaaatcacaaaataaaaaac 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 886 - 809
Alignment:
Q  28 gaaatcacaaaataaaaaacgtaactgatgtgaaaatcacttatttcaataaaagggaaatagaaaaatgagttagag 105  Q
    ||||||||  || |||||||| ||  |||||||||  ||||||||||||||||||||||| || |||| |||||||||    
T  886 gaaatcacggaagaaaaaacgaaatagatgtgaaagccacttatttcaataaaagggaaagaggaaaacgagttagag 809  T

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Target: scaffold0230 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 27161 - 27105
Alignment:
Q  217 tagggatggcaattggacccaggtccaatgaatacccgcataaaatacccacaatgg 273  Q
    ||||||||||||||||||||||   | ||| ||||||||| ||||||||||||||||    
T  27161 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgg 27105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10292 - 10338
Alignment:
Q  1 aacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaac 47  Q
    |||||||||||||||||| ||||| |  |||||||||||||||||||    
T  10292 aacaaaccaacgtcgcactaagacaaccaaatcacaaaataaaaaac 10338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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