View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3229_low_121 (Length: 251)

Name: NF3229_low_121
Description: NF3229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3229_low_121
NF3229_low_121
[»] chr3 (11 HSPs)
chr3 (13-251)||(53303024-53303262)
chr3 (13-251)||(47861851-47862089)
chr3 (13-251)||(11504115-11504353)
chr3 (13-251)||(48222400-48222631)
chr3 (13-251)||(1194172-1194406)
chr3 (153-251)||(11503753-11503851)
chr3 (153-251)||(48222896-48222994)
chr3 (153-251)||(47862354-47862452)
chr3 (153-251)||(53303527-53303625)
chr3 (145-241)||(6588653-6588749)
chr3 (177-243)||(11195722-11195788)
[»] chr5 (11 HSPs)
chr5 (13-251)||(31229868-31230106)
chr5 (13-251)||(2601270-2601508)
chr5 (13-251)||(4275640-4275877)
chr5 (153-251)||(4276142-4276240)
chr5 (153-251)||(2600907-2601005)
chr5 (153-251)||(31229505-31229603)
chr5 (172-243)||(3342247-3342318)
chr5 (172-243)||(3359156-3359227)
chr5 (177-243)||(3341669-3341735)
chr5 (177-243)||(3358578-3358644)
chr5 (167-218)||(5233876-5233927)
[»] chr4 (16 HSPs)
chr4 (13-251)||(51539897-51540135)
chr4 (13-251)||(39232179-39232417)
chr4 (13-251)||(4206645-4206876)
chr4 (66-251)||(49603901-49604086)
chr4 (13-251)||(46513438-46513664)
chr4 (153-251)||(4206282-4206380)
chr4 (153-251)||(39232681-39232779)
chr4 (153-251)||(49603493-49603591)
chr4 (153-251)||(51540400-51540498)
chr4 (177-251)||(2519632-2519706)
chr4 (172-243)||(2520217-2520288)
chr4 (172-243)||(29380384-29380455)
chr4 (177-243)||(29379806-29379872)
chr4 (13-46)||(49603856-49603889)
chr4 (191-243)||(2528601-2528653)
chr4 (169-238)||(42020880-42020949)
[»] chr8 (16 HSPs)
chr8 (13-251)||(38376645-38376883)
chr8 (13-251)||(29555583-29555821)
chr8 (66-251)||(5156627-5156812)
chr8 (66-251)||(44446451-44446636)
chr8 (66-251)||(28824608-28824793)
chr8 (153-251)||(5157122-5157220)
chr8 (153-251)||(28824200-28824298)
chr8 (153-251)||(38376282-38376380)
chr8 (153-251)||(44446043-44446141)
chr8 (153-251)||(29556085-29556183)
chr8 (177-251)||(5157310-5157384)
chr8 (172-243)||(5157885-5157956)
chr8 (172-243)||(39773649-39773720)
chr8 (177-243)||(39774232-39774298)
chr8 (13-46)||(5156824-5156857)
chr8 (13-46)||(44446406-44446439)
[»] chr7 (10 HSPs)
chr7 (13-251)||(33255796-33256034)
chr7 (66-251)||(47942086-47942271)
chr7 (153-251)||(33256299-33256397)
chr7 (153-251)||(47942581-47942679)
chr7 (153-251)||(47948011-47948109)
chr7 (172-243)||(7331195-7331266)
chr7 (172-243)||(31724085-31724156)
chr7 (177-243)||(7331778-7331844)
chr7 (144-243)||(16959483-16959582)
chr7 (13-46)||(47942283-47942316)
[»] chr2 (12 HSPs)
chr2 (13-251)||(22424109-22424347)
chr2 (153-251)||(22424612-22424710)
chr2 (153-251)||(1388977-1389075)
chr2 (64-251)||(25216897-25217080)
chr2 (177-251)||(29982818-29982892)
chr2 (177-251)||(37645072-37645146)
chr2 (172-243)||(15322553-15322624)
chr2 (172-243)||(21648262-21648333)
chr2 (172-243)||(29982235-29982306)
chr2 (172-243)||(37644489-37644560)
chr2 (177-243)||(21647684-21647750)
chr2 (177-243)||(15321897-15321963)
[»] chr6 (12 HSPs)
chr6 (13-240)||(305046-305273)
chr6 (66-251)||(644176-644361)
chr6 (13-251)||(19803454-19803688)
chr6 (66-251)||(33775644-33775829)
chr6 (13-250)||(22509832-22510048)
chr6 (153-251)||(305538-305636)
chr6 (153-251)||(644671-644769)
chr6 (153-251)||(33776139-33776237)
chr6 (177-251)||(26276094-26276168)
chr6 (13-46)||(644373-644406)
chr6 (172-237)||(26275517-26275582)
chr6 (13-46)||(33775841-33775874)
[»] chr1 (17 HSPs)
chr1 (13-251)||(11625724-11625962)
chr1 (13-251)||(36180161-36180399)
chr1 (13-251)||(250121-250352)
chr1 (153-251)||(11625361-11625459)
chr1 (153-251)||(249758-249856)
chr1 (153-251)||(36179791-36179889)
chr1 (153-251)||(47708400-47708498)
chr1 (151-243)||(29112977-29113069)
chr1 (172-243)||(9088351-9088422)
chr1 (172-243)||(32517472-32517543)
chr1 (172-243)||(45880839-45880910)
chr1 (177-243)||(9087773-9087839)
chr1 (177-243)||(35813376-35813442)
chr1 (177-243)||(45881422-45881488)
chr1 (172-240)||(35813954-35814022)
chr1 (167-218)||(42308799-42308850)
chr1 (177-239)||(32516898-32516960)
[»] scaffold0181 (2 HSPs)
scaffold0181 (177-243)||(17976-18042)
scaffold0181 (172-243)||(17393-17464)
[»] scaffold0178 (1 HSPs)
scaffold0178 (169-236)||(5030-5097)


Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 53303262 - 53303024
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53303262 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 53303163  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53303162 gaaatcgcaaaatgaatgttcctccagaacataagtaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 53303063  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  53303062 aatgtgaaaatttaaaatgcactaccggtatgtaactac 53303024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 47862089 - 47861851
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47862089 aatattgaagcttagaaaataactcttaaaaaactgcaccattttatacagataacaacgtgggtggagtaccgtatatatataccggaggtgtaattga 47861990  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  47861989 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 47861890  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  47861889 aatgtgaaaatttaaaatgcacatccggtatgtaactac 47861851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 11504115 - 11504353
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11504115 aatattgaagcttagaaaataactcttaaaaaactgcaccattttaaacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 11504214  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11504215 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 11504314  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||  |||| ||||||||||    
T  11504315 aatgtgaaaatttaaaatgcacatccgggatgtaactac 11504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 48222631 - 48222400
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48222631 aatattgaagcttagaaaataactcttaaaaaactgcaccattttatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 48222532  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  48222531 gaaatcgcaaaatgaatgttcctccagaacataactac-------gataaacgtgaaaatttgtaaatatgcctccggtatgtacataccgaaggtgtaa 48222439  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  48222438 aatgtgaaaatttaaaatgcactacctgtatgtaactac 48222400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 1194406 - 1194172
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||| |    
T  1194406 aatattgaagcttagaaaataactgttaaaaaactgcaccattttatacaaataacaacatgggtggagtacggtatatatataccggaggtgtaattaa 1194307  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||    ||||||| |||||||||||||| ||||||| || ||||| | ||||||||||||||||||||||||||||||||| |||||| |||    
T  1194306 gaaatcgcaa----aatgttcgtccagaacataactgccgaatgcgaaaaacgtggaaatttgtaaatgtgcctccggtatgtacataccgaaggtttaa 1194211  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  1194210 aatatgaaaatttaaaatgcactaccggtatgtaactac 1194172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 11503851 - 11503753
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11503851 aatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 11503753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 48222896 - 48222994
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48222896 aatgcgataaaagcgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 48222994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 47862354 - 47862452
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47862354 aatgcgataaacgcaaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 47862452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 53303527 - 53303625
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||| ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53303527 aatgcgataaatgcgaaaatttgtaaatgtgcccctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 53303625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 241
Target Start/End: Complemental strand, 6588749 - 6588653
Alignment:
Q  145 aactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggt 241  Q
    |||||||| ||||| |||| | | ||||||| ||||||| || |||||||||||||||  ||||| |||||||||||| |||||||| |||||||||    
T  6588749 aactaccgtatgtgctaaatgtgcaaatttgaaaatgtgtcttcggtatgtacatactcgaggtgcaaaatgtgaaaaattaaaatgaactaccggt 6588653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 11195722 - 11195788
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    ||||||||||| ||||||||||||  ||||||  |||||||||||| | |||||| |||||| ||||    
T  11195722 aaatgtgcctctggtatgtacatatcgaaggttcaaaatgtgaaaaataaaaatgaactaccagtat 11195788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 31229868 - 31230106
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31229868 aatattgaagcttagaaaataactcttaaaaaactgcaccattttattcagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 31229967  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  31229968 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 31230067  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31230068 aatgtgaaaatttaaaatgcactaccggtatgtaactac 31230106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 2601270 - 2601508
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2601270 aatattgaagcttagaaaataactcttaaaaaactacaccattttatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 2601369  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  2601370 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataagcgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 2601469  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2601470 aatgtgaaaatttaaaatgcactaccggtatgtaactac 2601508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 4275877 - 4275640
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4275877 aatattgaagcttagaaaataactcttaaaaaactgcaccattttatacagataacaacgtgggtggagtacggtatatatataccggaggtataattga 4275778  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  4275777 gaaatcgcaaa-tgaatgttcctccagaacataactaccaaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 4275679  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4275678 aatgtgaaaatttaaaatgcactaccggtatgtaactac 4275640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 4276142 - 4276240
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4276142 aatgcgataaacgcgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 4276240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 2601005 - 2600907
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2601005 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 2600907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 31229603 - 31229505
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31229603 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 31229505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 3342247 - 3342318
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  3342247 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 3342318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 3359156 - 3359227
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  3359156 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 3359227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 3341735 - 3341669
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  3341735 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 3341669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 3358644 - 3358578
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  3358644 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 3358578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 5233927 - 5233876
Alignment:
Q  167 gaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtg 218  Q
    |||||| || |||| |||||||||||||||||||| ||||||| ||||||||    
T  5233927 gaaaatgtgaaaatatgcctccggtatgtacataccgaaggtgcaaaatgtg 5233876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 51540135 - 51539897
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51540135 aatattgaagcttagaaaataactcttaaaaaactgcaccattttattcagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 51540036  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  51540035 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 51539936  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51539935 aatgtgaaaatttaaaatgcactaccggtatgtaactac 51539897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 39232417 - 39232179
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39232417 aatattgaagcttagaaaataactcttaaaaaactgcaccattttaaacagataacaacgtgggtggagtacggtatatatataccggatgtgtaattga 39232318  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  39232317 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 39232218  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39232217 aatgtgaaaatttaaaatgcactaccggtatgtaactac 39232179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 4206645 - 4206876
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4206645 aatattgaagcttagaaaataactcttaaaaaactgcaccattttatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 4206744  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  4206745 gaaatcgcaaaatgaatgttcctccagaacataactac-------gataaacgtgaaaatttgtaaatatgcctccggtatgtacataccgaaggtgtaa 4206837  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  4206838 aatgtgaaaatttaaaatgcactacctgtatgtaactac 4206876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 49603901 - 49604086
Alignment:
Q  66 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49603901 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacg 49604000  T
Q  166 cgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49604001 tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 49604086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 46513438 - 46513664
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    |||||||||||||| ||||||| | |||||||| ||||||||| |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  46513438 aatattgaagcttataaaataaatgttaaaaaattgcaccattttatatagataacaacgtgggttgagtacggtatgtatataccagaggtgtaattga 46513537  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||    |||||||||||| ||||||||||| ||||| |||||||| |||||||        ||||||||||||| |||||| |||||| |||    
T  46513538 gaaatcgcaa----aatgttcctccataacataactactgaatgcgataaacgtgaaaatt--------tgcctccggtatgcacataccgaaggtttaa 46513625  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46513626 aatgtgaaaatttaaaatgcactaccggtatgtaactac 46513664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 4206380 - 4206282
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4206380 aatgcgataaaagcgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 4206282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 39232681 - 39232779
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39232681 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 39232779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 49603591 - 49603493
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49603591 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 49603493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 51540400 - 51540498
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51540400 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 51540498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 2519706 - 2519632
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2519706 aaatgtgcctccggtatgtacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 2519632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 2520217 - 2520288
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  2520217 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 2520288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 29380384 - 29380455
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  29380384 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 29380455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 29379872 - 29379806
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| || ||||||||    
T  29379872 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaacgaccggtat 29379806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 49603856 - 49603889
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaac 46  Q
    ||||||||||||||||||||||||||||||||||    
T  49603856 aatattgaagcttagaaaataactcttaaaaaac 49603889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 2528601 - 2528653
Alignment:
Q  191 tatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    ||||||||| | |||||| | ||||||||||||||||||||||| ||||||||    
T  2528601 tatgtacatccggaaggttttaaatgtgaaaatttaaaatgcaccaccggtat 2528653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 42020880 - 42020949
Alignment:
Q  169 aaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactacc 238  Q
    ||||||| | |||||||| ||||||||||||||   ||||| |||||||||||| ||||| || ||||||    
T  42020880 aaatttgaatatgtgccttcggtatgtacataccagaggtgcaaaatgtgaaaagttaaattgaactacc 42020949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 38376645 - 38376883
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38376645 aatattgaagcttagaaaataactcttaaaaaactgcaccattttatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 38376744  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  38376745 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 38376844  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  38376845 aatgtgaaaatttaaaatgcacatccggtatgtaactac 38376883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 29555821 - 29555583
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29555821 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatttagataacaacgtgggtggagtacggtatatatataccggatgtgtaattga 29555722  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  29555721 gaaatcgcaaaatgaatgttcctctagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 29555622  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||  |||| ||||||||||    
T  29555621 aatgtgaaaatttaaaatgcacatccgggatgtaactac 29555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 5156812 - 5156627
Alignment:
Q  66 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5156812 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacg 5156713  T
Q  166 cgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5156712 tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 5156627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 44446451 - 44446636
Alignment:
Q  66 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44446451 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacg 44446550  T
Q  166 cgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44446551 tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 44446636  T

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Target: chr8; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 28824608 - 28824793
Alignment:
Q  66 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  28824608 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataattaccgaatgcgataaacg 28824707  T
Q  166 cgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
     |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28824708 tgaaaatttgtaaatgtgcctccagtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 28824793  T

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Target: chr8; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 5157122 - 5157220
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5157122 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 5157220  T

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Target: chr8; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 28824298 - 28824200
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28824298 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 28824200  T

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Target: chr8; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 38376380 - 38376282
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38376380 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 38376282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 44446141 - 44446043
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44446141 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 44446043  T

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Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 29556085 - 29556183
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29556085 aatgcgataaacgcgaaaatttgtaaatgtgtctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 29556183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 5157384 - 5157310
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5157384 aaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 5157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 5157885 - 5157956
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  5157885 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 5157956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 39773720 - 39773649
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| | |||| ||||| |||||||| |||||||||||    
T  39773720 tttgaaaatgtgccttcggtatgtacataccggaggtgcagaatgagaaaagttaaaatgaactaccggtat 39773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 39774232 - 39774298
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||| ||||||    
T  39774232 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactatcggtat 39774298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 5156857 - 5156824
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaac 46  Q
    ||||||||||||||||||||||||||||||||||    
T  5156857 aatattgaagcttagaaaataactcttaaaaaac 5156824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 44446406 - 44446439
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaac 46  Q
    ||||||||||||||||||||||||||||||||||    
T  44446406 aatattgaagcttagaaaataactcttaaaaaac 44446439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 33256034 - 33255796
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33256034 aatattgaagcttagaaaataactcttaaaaaactgcaccattttattcagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 33255935  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||    
T  33255934 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaatgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 33255835  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33255834 aatgtgaaaatttaaaatgcactaccggtatgtaactac 33255796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 47942271 - 47942086
Alignment:
Q  66 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47942271 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacg 47942172  T
Q  166 cgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  47942171 tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcacatccggtatgtaactac 47942086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 33256299 - 33256397
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33256299 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 33256397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 47942581 - 47942679
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47942581 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 47942679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 47948011 - 47948109
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47948011 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 47948109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 7331266 - 7331195
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  7331266 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 7331195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 31724085 - 31724156
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||| |||||||| ||||| |||||||| |||||||||||    
T  31724085 tttgaaaatgtgccttcggtatgtacataccggaggggtaaaatgagaaaagttaaaatgaactaccggtat 31724156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 7331778 - 7331844
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  7331778 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 7331844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 16959483 - 16959582
Alignment:
Q  144 taactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    ||||||||| ||||| |||| | | |||| || ||||||||  |||||||||||| || ||||||| ||||||||||||  |||||||  ||||||||||    
T  16959483 taactaccgtatgtgctaaatgtgcaaatgtgaaaatgtgcagccggtatgtacagaccgaaggtgcaaaatgtgaaaaaataaaatgatctaccggtat 16959582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 47942316 - 47942283
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaac 46  Q
    ||||||||||||||||||||||||||||||||||    
T  47942316 aatattgaagcttagaaaataactcttaaaaaac 47942283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 22424347 - 22424109
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22424347 aatattgaagcttagaaaataactcttaaaaaactgcaccattttatatagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 22424248  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  22424247 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 22424148  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  22424147 aatatgaaaatttaaaatgcactaccggtatgtaactac 22424109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 22424612 - 22424710
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22424612 aatgcgataaacgcgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 22424710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 1388977 - 1389075
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1388977 aatgcgataaaagcgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 1389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 251
Target Start/End: Original strand, 25216897 - 25217080
Alignment:
Q  64 ataacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaa 163  Q
    ||||||| |||||||||||||||||| ||||||||| ||| ||||   ||||||| |||||||    ||||||| |||||||||||||||||||| ||||    
T  25216897 ataacaatgtgggtggagtacggtatgtatataccgtaggcgtaaaatagaaatctcaaaatg----ttcctccggaacataactaccgaatgtgctaaa 25216992  T
Q  164 cgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
       ||||| || |||||||||| ||||||||||||||| ||||||  ||||||||||| |||||||||||| |||||||| |||||||    
T  25216993 tctgaaaaattataaatgtgcccccggtatgtacataccgaaggttcaaaatgtgaaattttaaaatgcaccaccggtatttaactac 25217080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 29982818 - 29982892
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29982818 aaatgtgcctccggtatgtacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 29982892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 37645072 - 37645146
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37645072 aaatgtgcctccggtatgtacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 37645146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 15322553 - 15322624
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  15322553 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 15322624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 21648262 - 21648333
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  21648262 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 21648333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 29982306 - 29982235
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  29982306 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 29982235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 37644560 - 37644489
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  37644560 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 37644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 21647750 - 21647684
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  21647750 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 21647684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 15321963 - 15321897
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| ||||||||| |||| | ||||| |||||| ||||| |||||| | |||||||||||    
T  15321963 aaatgtgccttcggtatgtatataccggaggtgcaaaatgagaaaaattaaaacgaactaccggtat 15321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 305273 - 305046
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  305273 aatattgaagcttagaaaataactcttaaaaaactgcaccattttatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 305174  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  305173 gaaatcgcaaaatgaatgttccttcagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 305074  T
Q  213 aatgtgaaaatttaaaatgcactaccgg 240  Q
    ||||||||||||||||||||||||||||    
T  305073 aatgtgaaaatttaaaatgcactaccgg 305046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 644361 - 644176
Alignment:
Q  66 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  644361 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacg 644262  T
Q  166 cgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  644261 tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactatcggtatgtaactac 644176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 19803688 - 19803454
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19803688 aatattgaagcttagaaaataactgttaaaaaactgcaccattttatacaaataacaacgtgggtggagtacggtatatatataccggaggtgtaattaa 19803589  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||    ||||||| |||| ||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||| |||    
T  19803588 gaaatcgcaa----aatgttcgtccaaaacataactgccgaatgcgaaaaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtttaa 19803493  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  19803492 aatatgaaaatttaaaatgcactaccggtatgtaactac 19803454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 33775829 - 33775644
Alignment:
Q  66 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  33775829 aacaacgtgggtggagtacggtatatatataccggaggtgtaattgagaaatcgcaaaatgaatgttccaccagaacataactaccgaatgcgataaacg 33775730  T
Q  166 cgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33775729 tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 33775644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 22510048 - 22509832
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||| |||||| |||||||||||||||||||||||        |||||||||||||    
T  22510048 aatattgaagcttagaaaataagtgttaaaaaactgcaccattttatatagataataacgtgggtggagtacggtatat--------gaggtgtaattga 22509957  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||    ||| |||||||||||||||||||||||||  |||||||| |||||||        ||||||||| |||||||||| |||||| |||    
T  22509956 gaaatcgcaa----aatattcctccagaacataactaccgaatacgataaacgtgaaaatt--------tgcctccggcatgtacataccgaaggtttaa 22509869  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaacta 250  Q
    |||||||||| |||||||||||||||||||||||||||    
T  22509868 aatgtgaaaa-ttaaaatgcactaccggtatgtaacta 22509832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 305538 - 305636
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  305538 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 305636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 644671 - 644769
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  644671 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 644769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 33776139 - 33776237
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33776139 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 33776237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 26276094 - 26276168
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26276094 aaatgtgcctccggtatgtacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 26276168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 644406 - 644373
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaac 46  Q
    ||||||||||||||||||||||||||||||||||    
T  644406 aatattgaagcttagaaaataactcttaaaaaac 644373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 26275582 - 26275517
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactac 237  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||    
T  26275582 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactac 26275517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 33775874 - 33775841
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaac 46  Q
    ||||||||||||||||||||||||||||||||||    
T  33775874 aatattgaagcttagaaaataactcttaaaaaac 33775841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 11625724 - 11625962
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11625724 aatattgaagcttagaaaataactcttaaaaacctgcaccgttttatacagataacaacgtgggtggagtacggtatatatataccgaaggtgtaattga 11625823  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11625824 gaaattgcaaaatgaatgttcctccagaacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 11625923  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11625924 aatgtgaaaatttaaaatgcactaccggtatgtaactac 11625962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 36180161 - 36180399
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36180161 aatattaaagcttagaaaataactcttaaaaaactgcaccattttatacagataacaacgtgggtggagtactgtatatatataccggaggtgtaattga 36180260  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  36180261 gaaatcgcaatatgaatgttcctccataacataactaccgaatgcgataaacgtgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaa 36180360  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36180361 aatgtgaaaatttaaaatgcactaccggtatgtaactac 36180399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 250121 - 250352
Alignment:
Q  13 aatattgaagcttagaaaataactcttaaaaaactgcaccattatatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  250121 aatattgaagcttagaaaataactcttaaaaaactgcaccattttatacagataacaacgtgggtggagtacggtatatatataccggaggtgtaattga 250220  T
Q  113 gaaatcgcaaaatgaatgttcctccagaacataactaccgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaa 212  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||    
T  250221 gaaatcgcaaaatgaatgttcctccagaacataactac-------gataaacgtgaaaatttgtaaatatgcctccggtatgtacatatcgaaggtgtaa 250313  T
Q  213 aatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  250314 aatgtgaaaatttaaaatgcactacctgtatgtaactac 250352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 11625459 - 11625361
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11625459 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 11625361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 249856 - 249758
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  249856 aatgcgataaaagcgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccgatatgtaactac 249758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 36179889 - 36179791
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36179889 aatgcgataaacgcgaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatttgaaaatttaaaatgcactaccggtatgtaactac 36179791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 47708400 - 47708498
Alignment:
Q  153 aatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactac 251  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47708400 aatgcgataaacgcgaatatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccagtatgtaactac 47708498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 29112977 - 29113069
Alignment:
Q  151 cgaatgtgataaacgcgaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||| |||| | ||||||||| ||| ||||||||| |||||||| | |||||||  |||||||| |||||||||||||||||| |||||    
T  29112977 cgaatgtgctaaatgtgaaaatttgaaaaagtgcctccgatatgtacacattgaaggttcaaaatgtgtaaatttaaaatgcactacgggtat 29113069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 9088351 - 9088422
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  9088351 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 9088422  T

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Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 32517472 - 32517543
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  32517472 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 32517543  T

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Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 45880910 - 45880839
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  45880910 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 45880839  T

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Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 9087839 - 9087773
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  9087839 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 9087773  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 35813442 - 35813376
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  35813442 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 35813376  T

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Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 45881422 - 45881488
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  45881422 aaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccggtat 45881488  T

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Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 35813954 - 35814022
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccgg 240  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| ||||||||    
T  35813954 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccgg 35814022  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 42308799 - 42308850
Alignment:
Q  167 gaaaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtg 218  Q
    |||||| || |||| |||||||||||||||||||| ||||||| ||||||||    
T  42308799 gaaaatgtgaaaatatgcctccggtatgtacataccgaaggtgcaaaatgtg 42308850  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 32516960 - 32516898
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccg 239  Q
    ||||||||||  ||||||||||||| | ||||| |||||| ||||| |||||||| |||||||    
T  32516960 aaatgtgcctttggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccg 32516898  T

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Target: scaffold0181 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 17976 - 18042
Alignment:
Q  177 aaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||||||||| |||||||||||||| ||||||| |||||| ||||| |||||||| |||||||||||    
T  17976 aaatgtgccttcggtatgtacataccgaaggtgcaaaatgagaaaaattaaaatgaactaccggtat 18042  T

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Target: scaffold0181; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 17464 - 17393
Alignment:
Q  172 tttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtat 243  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||| ||||| |||||||| |||||||||||    
T  17464 tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggtat 17393  T

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Target: scaffold0178 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 5030 - 5097
Alignment:
Q  169 aaatttgtaaatgtgcctccggtatgtacatactgaaggtgtaaaatgtgaaaatttaaaatgcacta 236  Q
    ||||||| |||||||||| |||||||||||||| | ||||| |||||||||||| |||||||| ||||    
T  5030 aaatttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgtgaaaaattaaaatgaacta 5097  T

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