View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3229_low_193 (Length: 211)
Name: NF3229_low_193
Description: NF3229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3229_low_193 |
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Alignment Details
Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38635278 - 38635365
Alignment:
| Q |
1 |
caaccgtcgtcataggccctttttcaacaacttcatcttcgaatcgcaatgctagaaccacattttccgccaattttacttctagaag |
88 |
Q |
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| T |
38635278 |
caaccgtcgtcataggccctttttcaacaacttcatcttcgaatcgcaatgctagaaccacatttgccgccaattttacttctagaag |
38635365 |
T |
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