View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3229_low_87 (Length: 300)

Name: NF3229_low_87
Description: NF3229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3229_low_87
NF3229_low_87
[»] chr5 (67 HSPs)
chr5 (30-156)||(10043363-10043489)
chr5 (20-149)||(33744190-33744319)
chr5 (21-156)||(10204687-10204822)
chr5 (21-156)||(34980921-34981056)
chr5 (23-155)||(12035936-12036067)
chr5 (21-155)||(15986622-15986756)
chr5 (21-156)||(40305668-40305798)
chr5 (23-92)||(14245088-14245157)
chr5 (19-155)||(10043006-10043141)
chr5 (70-153)||(6597837-6597920)
chr5 (30-140)||(6382454-6382564)
chr5 (23-92)||(26414893-26414962)
chr5 (29-156)||(21581058-21581185)
chr5 (23-94)||(15986797-15986868)
chr5 (19-156)||(11437050-11437190)
chr5 (24-94)||(13634884-13634954)
chr5 (23-93)||(40305839-40305909)
chr5 (23-88)||(13634711-13634776)
chr5 (29-92)||(11436945-11437008)
chr5 (29-86)||(2550533-2550590)
chr5 (23-92)||(7544136-7544205)
chr5 (29-113)||(1657967-1658051)
chr5 (20-92)||(4373741-4373813)
chr5 (19-138)||(2183943-2184062)
chr5 (21-92)||(14245221-14245292)
chr5 (21-92)||(16938477-16938548)
chr5 (222-267)||(13634910-13634955)
chr5 (20-92)||(7544311-7544383)
chr5 (23-91)||(10204576-10204644)
chr5 (222-266)||(13634712-13634756)
chr5 (222-266)||(14245245-14245289)
chr5 (222-266)||(16938480-16938524)
chr5 (23-91)||(40815297-40815365)
chr5 (223-266)||(5688590-5688633)
chr5 (96-155)||(8551491-8551550)
chr5 (223-266)||(14245089-14245132)
chr5 (31-94)||(33744366-33744429)
chr5 (220-266)||(7544137-7544183)
chr5 (22-92)||(14684659-14684729)
chr5 (222-263)||(2550551-2550592)
chr5 (217-266)||(10204577-10204626)
chr5 (20-93)||(10476202-10476275)
chr5 (217-266)||(15986818-15986867)
chr5 (23-92)||(20513612-20513681)
chr5 (29-93)||(8551592-8551656)
chr5 (23-87)||(10476026-10476090)
chr5 (222-266)||(10476027-10476071)
chr5 (29-92)||(16501966-16502030)
chr5 (230-266)||(20147077-20147113)
chr5 (222-266)||(26414894-26414938)
chr5 (29-117)||(36363182-36363270)
chr5 (222-265)||(1658012-1658055)
chr5 (21-68)||(5688589-5688636)
chr5 (35-94)||(10043264-10043323)
chr5 (29-84)||(42681454-42681509)
chr5 (224-266)||(10476229-10476271)
chr5 (220-262)||(11436944-11436986)
chr5 (16-94)||(34980803-34980881)
chr5 (224-266)||(40305866-40305908)
chr5 (21-94)||(15858913-15858986)
chr5 (23-92)||(20147050-20147114)
chr5 (217-266)||(33744387-33744436)
chr5 (108-156)||(5688524-5688572)
chr5 (232-264)||(14681473-14681505)
chr5 (29-61)||(14681476-14681508)
chr5 (217-265)||(34980812-34980860)
chr5 (230-266)||(40305671-40305707)
[»] chr7 (72 HSPs)
chr7 (23-156)||(28074103-28074236)
chr7 (21-156)||(36267551-36267686)
chr7 (21-156)||(33519159-33519294)
chr7 (21-156)||(48881556-48881691)
chr7 (33-156)||(35422075-35422198)
chr7 (64-152)||(21857462-21857549)
chr7 (20-156)||(37925952-37926088)
chr7 (23-151)||(48015323-48015451)
chr7 (31-156)||(30592261-30592386)
chr7 (67-143)||(2087783-2087859)
chr7 (60-156)||(39646580-39646676)
chr7 (29-156)||(37620885-37621012)
chr7 (62-156)||(3215900-3215993)
chr7 (23-92)||(39856040-39856109)
chr7 (20-156)||(16833806-16833945)
chr7 (23-94)||(1051671-1051742)
chr7 (48-156)||(31364070-31364175)
chr7 (21-92)||(34228494-34228565)
chr7 (23-94)||(37925841-37925912)
chr7 (20-94)||(8122141-8122215)
chr7 (20-90)||(47390852-47390922)
chr7 (23-156)||(18231697-18231830)
chr7 (23-91)||(4833531-4833599)
chr7 (20-92)||(13770945-13771017)
chr7 (24-92)||(31571645-31571713)
chr7 (29-117)||(33519054-33519142)
chr7 (23-91)||(36267729-36267797)
chr7 (218-266)||(36267748-36267796)
chr7 (60-148)||(48013622-48013710)
chr7 (19-90)||(33655285-33655356)
chr7 (21-156)||(40196530-40196665)
chr7 (21-92)||(41496955-41497026)
chr7 (60-155)||(48094005-48094100)
chr7 (20-90)||(39646466-39646536)
chr7 (217-266)||(37925842-37925891)
chr7 (222-266)||(39856064-39856108)
chr7 (21-89)||(40282195-40282263)
chr7 (96-151)||(8122264-8122319)
chr7 (62-156)||(23116298-23116393)
chr7 (21-88)||(25887190-25887257)
chr7 (29-92)||(43230242-43230305)
chr7 (21-67)||(28074308-28074354)
chr7 (70-104)||(32872828-32872862)
chr7 (220-266)||(36267554-36267600)
chr7 (19-86)||(47229998-47230067)
chr7 (23-92)||(4835479-4835548)
chr7 (115-156)||(12670928-12670969)
chr7 (23-92)||(13771121-13771190)
chr7 (224-265)||(37620776-37620817)
chr7 (230-266)||(1051705-1051741)
chr7 (222-266)||(33519247-33519291)
chr7 (108-155)||(7791831-7791878)
chr7 (223-266)||(13770949-13770992)
chr7 (29-104)||(18795758-18795832)
chr7 (223-266)||(25887193-25887236)
chr7 (29-92)||(41008188-41008251)
chr7 (224-266)||(28074104-28074146)
chr7 (230-264)||(31364251-31364285)
chr7 (224-266)||(31571671-31571713)
chr7 (220-266)||(48881559-48881605)
chr7 (232-266)||(48881758-48881792)
chr7 (62-123)||(12670572-12670633)
chr7 (217-266)||(28074302-28074351)
chr7 (217-262)||(33519053-33519098)
chr7 (225-266)||(41496958-41496999)
chr7 (222-266)||(4833532-4833576)
chr7 (23-91)||(13425120-13425188)
chr7 (230-266)||(13771153-13771189)
chr7 (29-77)||(23116418-23116466)
chr7 (230-266)||(40196533-40196569)
chr7 (230-266)||(40282198-40282234)
chr7 (230-266)||(47390856-47390892)
[»] chr8 (62 HSPs)
chr8 (21-156)||(12022140-12022276)
chr8 (21-156)||(43732798-43732933)
chr8 (21-156)||(8815139-8815274)
chr8 (29-156)||(16024265-16024391)
chr8 (43-156)||(6453295-6453408)
chr8 (29-155)||(29937614-29937740)
chr8 (21-156)||(34196420-34196553)
chr8 (23-156)||(30365241-30365374)
chr8 (60-156)||(20472729-20472825)
chr8 (19-140)||(40632992-40633106)
chr8 (20-90)||(31543249-31543319)
chr8 (60-152)||(9933356-9933448)
chr8 (23-91)||(43732679-43732747)
chr8 (23-90)||(9718656-9718723)
chr8 (27-92)||(1281147-1281212)
chr8 (70-156)||(8671839-8671927)
chr8 (23-92)||(12022318-12022387)
chr8 (20-96)||(8671965-8672041)
chr8 (19-94)||(30365126-30365201)
chr8 (29-91)||(11575582-11575644)
chr8 (29-94)||(7394634-7394699)
chr8 (217-266)||(12022337-12022386)
chr8 (23-88)||(13404976-13405041)
chr8 (23-156)||(24243050-24243180)
chr8 (23-92)||(31543072-31543141)
chr8 (107-156)||(43826443-43826492)
chr8 (85-156)||(9434360-9434432)
chr8 (60-156)||(39449415-39449511)
chr8 (19-90)||(7503131-7503202)
chr8 (23-94)||(8815314-8815385)
chr8 (29-112)||(16024159-16024242)
chr8 (21-92)||(31738598-31738669)
chr8 (29-92)||(36309018-36309081)
chr8 (224-266)||(13404977-13405019)
chr8 (23-92)||(1027023-1027092)
chr8 (217-266)||(8815335-8815384)
chr8 (39-100)||(11033585-11033646)
chr8 (47-92)||(30581988-30582033)
chr8 (217-266)||(43732680-43732729)
chr8 (20-92)||(7979137-7979209)
chr8 (222-266)||(31543271-31543315)
chr8 (222-266)||(43732886-43732930)
chr8 (222-261)||(1281149-1281188)
chr8 (21-92)||(2248450-2248521)
chr8 (23-94)||(9933240-9933311)
chr8 (218-265)||(16024155-16024202)
chr8 (231-266)||(16652959-16652994)
chr8 (224-266)||(2248453-2248495)
chr8 (30-104)||(5541871-5541945)
chr8 (31-96)||(6453190-6453256)
chr8 (225-263)||(7394663-7394701)
chr8 (19-92)||(3726859-3726932)
chr8 (225-266)||(9718681-9718722)
chr8 (20-88)||(11033416-11033482)
chr8 (29-94)||(20472865-20472930)
chr8 (230-266)||(3726864-3726900)
chr8 (230-266)||(4247727-4247763)
chr8 (23-59)||(6315066-6315102)
chr8 (222-266)||(7503153-7503197)
chr8 (116-156)||(22591501-22591541)
chr8 (222-266)||(34634342-34634386)
chr8 (222-266)||(41103505-41103549)
[»] chr2 (60 HSPs)
chr2 (23-155)||(42813732-42813864)
chr2 (19-156)||(45257418-45257555)
chr2 (29-152)||(31061474-31061598)
chr2 (43-156)||(15085719-15085833)
chr2 (42-152)||(42296322-42296432)
chr2 (19-130)||(22356140-22356252)
chr2 (77-156)||(3094407-3094486)
chr2 (40-152)||(1052771-1052884)
chr2 (56-156)||(33265717-33265817)
chr2 (60-156)||(36052124-36052220)
chr2 (29-156)||(31795775-31795902)
chr2 (69-140)||(9313114-9313185)
chr2 (29-156)||(2380998-2381120)
chr2 (64-156)||(21502144-21502236)
chr2 (20-88)||(35736172-35736240)
chr2 (21-140)||(16713652-16713771)
chr2 (21-92)||(36347716-36347787)
chr2 (30-94)||(1270451-1270515)
chr2 (32-91)||(886927-886986)
chr2 (21-84)||(17333995-17334058)
chr2 (73-156)||(35325380-35325463)
chr2 (19-94)||(42296476-42296551)
chr2 (81-156)||(45098280-45098355)
chr2 (23-89)||(35736365-35736431)
chr2 (23-92)||(15224869-15224938)
chr2 (217-266)||(31061360-31061409)
chr2 (96-149)||(34187695-34187748)
chr2 (19-92)||(39732903-39732976)
chr2 (15-67)||(17379838-17379890)
chr2 (222-266)||(17379847-17379891)
chr2 (222-266)||(35736176-35736220)
chr2 (21-92)||(887285-887355)
chr2 (23-94)||(31061359-31061430)
chr2 (31-94)||(33265615-33265678)
chr2 (29-92)||(36046377-36046439)
chr2 (23-94)||(45257307-45257378)
chr2 (29-91)||(3094529-3094591)
chr2 (224-266)||(36347742-36347784)
chr2 (75-156)||(8554351-8554432)
chr2 (60-113)||(14196823-14196876)
chr2 (23-92)||(23748270-23748339)
chr2 (217-266)||(23748289-23748338)
chr2 (217-266)||(35736381-35736430)
chr2 (222-266)||(22356203-22356247)
chr2 (19-63)||(31795968-31796012)
chr2 (100-156)||(31928121-31928177)
chr2 (217-260)||(31928243-31928286)
chr2 (23-94)||(34187575-34187646)
chr2 (32-91)||(40022549-40022608)
chr2 (222-265)||(41841684-41841727)
chr2 (29-87)||(8427051-8427109)
chr2 (58-104)||(14187109-14187155)
chr2 (223-265)||(36046401-36046443)
chr2 (23-92)||(17380016-17380085)
chr2 (233-266)||(17380051-17380084)
chr2 (30-91)||(31928225-31928286)
chr2 (217-266)||(42296497-42296546)
chr2 (217-266)||(45257308-45257357)
chr2 (222-266)||(41778774-41778818)
chr2 (19-91)||(41841678-41841750)
[»] chr3 (59 HSPs)
chr3 (23-156)||(34641103-34641234)
chr3 (29-154)||(55428492-55428617)
chr3 (16-156)||(24253833-24253973)
chr3 (19-156)||(44412472-44412609)
chr3 (39-156)||(26135908-26136025)
chr3 (20-156)||(10943611-10943747)
chr3 (23-156)||(8432261-8432392)
chr3 (60-156)||(40858676-40858772)
chr3 (29-156)||(17474212-17474339)
chr3 (74-152)||(48683727-48683806)
chr3 (20-92)||(220572-220644)
chr3 (70-156)||(42772143-42772229)
chr3 (23-156)||(16883974-16884104)
chr3 (81-156)||(21090129-21090204)
chr3 (29-156)||(36727287-36727413)
chr3 (70-156)||(41414189-41414276)
chr3 (69-156)||(18086026-18086114)
chr3 (20-92)||(28582684-28582756)
chr3 (69-140)||(54985739-54985810)
chr3 (29-91)||(42772050-42772112)
chr3 (23-92)||(24560217-24560286)
chr3 (80-156)||(42699669-42699745)
chr3 (29-96)||(17474377-17474444)
chr3 (108-155)||(27197734-27197781)
chr3 (23-90)||(41414078-41414145)
chr3 (23-94)||(44412361-44412432)
chr3 (220-266)||(34641187-34641233)
chr3 (29-90)||(21090248-21090309)
chr3 (23-92)||(25655147-25655216)
chr3 (222-266)||(24560218-24560262)
chr3 (17-112)||(34640996-34641081)
chr3 (100-156)||(46978538-46978594)
chr3 (20-91)||(5961945-5962015)
chr3 (29-91)||(14897982-14898044)
chr3 (21-91)||(24560393-24560463)
chr3 (224-266)||(24560418-24560460)
chr3 (232-266)||(37102348-37102382)
chr3 (74-156)||(45663197-45663277)
chr3 (225-263)||(55428581-55428619)
chr3 (23-80)||(5903549-5903606)
chr3 (23-92)||(21773782-21773851)
chr3 (29-90)||(26135808-26135864)
chr3 (39-92)||(30200266-30200319)
chr3 (21-58)||(37102348-37102385)
chr3 (23-92)||(41110496-41110565)
chr3 (217-266)||(41414079-41414128)
chr3 (229-266)||(54574562-54574599)
chr3 (60-104)||(1816051-1816095)
chr3 (222-266)||(18654601-18654645)
chr3 (224-264)||(18654802-18654842)
chr3 (230-266)||(24253722-24253758)
chr3 (222-266)||(28582708-28582752)
chr3 (20-92)||(41110318-41110390)
chr3 (230-266)||(41110528-41110564)
chr3 (217-265)||(42772046-42772094)
chr3 (29-89)||(43005917-43005977)
chr3 (218-266)||(44412362-44412410)
chr3 (217-265)||(44412555-44412603)
chr3 (60-104)||(49815459-49815503)
[»] chr1 (58 HSPs)
chr1 (29-155)||(35512909-35513035)
chr1 (21-156)||(40709290-40709425)
chr1 (23-156)||(1085489-1085623)
chr1 (31-156)||(25268375-25268500)
chr1 (23-156)||(51303384-51303517)
chr1 (20-156)||(35927924-35928059)
chr1 (62-152)||(47071166-47071256)
chr1 (29-156)||(2506650-2506777)
chr1 (70-153)||(13386966-13387049)
chr1 (21-92)||(30010330-30010401)
chr1 (23-156)||(20607330-20607461)
chr1 (21-92)||(40094931-40095002)
chr1 (23-92)||(12234010-12234079)
chr1 (75-156)||(33643379-33643460)
chr1 (74-149)||(1344666-1344741)
chr1 (20-94)||(1085663-1085737)
chr1 (60-156)||(525139-525232)
chr1 (20-92)||(35349637-35349709)
chr1 (29-92)||(7444484-7444547)
chr1 (23-90)||(41498404-41498471)
chr1 (30-92)||(2859107-2859169)
chr1 (18-92)||(32951493-32951567)
chr1 (21-94)||(33643266-33643339)
chr1 (29-122)||(33673360-33673453)
chr1 (20-92)||(41498579-41498652)
chr1 (217-266)||(51303385-51303434)
chr1 (20-92)||(12234185-12234257)
chr1 (222-266)||(26324015-26324059)
chr1 (20-92)||(38509891-38509963)
chr1 (223-266)||(30010333-30010376)
chr1 (29-92)||(38510069-38510132)
chr1 (220-266)||(12234011-12234057)
chr1 (22-91)||(2858931-2859000)
chr1 (217-266)||(35927815-35927864)
chr1 (222-266)||(20607416-20607460)
chr1 (23-67)||(26324014-26324058)
chr1 (23-91)||(40095110-40095178)
chr1 (222-266)||(41498405-41498449)
chr1 (68-156)||(52707756-52707844)
chr1 (222-265)||(12234209-12234252)
chr1 (220-263)||(35512994-35513037)
chr1 (23-90)||(35927814-35927881)
chr1 (232-266)||(26941042-26941076)
chr1 (222-264)||(38510093-38510135)
chr1 (31-92)||(10391880-10391941)
chr1 (21-58)||(26941042-26941079)
chr1 (217-266)||(38509895-38509944)
chr1 (230-266)||(525307-525343)
chr1 (230-266)||(1085697-1085733)
chr1 (222-266)||(2858933-2858977)
chr1 (31-91)||(13387103-13387163)
chr1 (224-264)||(20576136-20576176)
chr1 (230-266)||(20607224-20607260)
chr1 (222-266)||(30010531-30010575)
chr1 (222-266)||(35349661-35349705)
chr1 (222-266)||(40094934-40094978)
chr1 (29-113)||(40709446-40709529)
chr1 (31-91)||(49832555-49832615)
[»] scaffold0026 (5 HSPs)
scaffold0026 (29-155)||(1403-1529)
scaffold0026 (29-92)||(1178-1241)
scaffold0026 (23-94)||(1571-1642)
scaffold0026 (217-266)||(1592-1641)
scaffold0026 (224-264)||(1175-1215)
[»] chr4 (85 HSPs)
chr4 (29-156)||(54576333-54576460)
chr4 (21-156)||(34995162-34995295)
chr4 (29-156)||(4437431-4437558)
chr4 (59-156)||(22186830-22186927)
chr4 (62-156)||(55080690-55080784)
chr4 (60-156)||(43961521-43961617)
chr4 (23-150)||(5825013-5825140)
chr4 (21-156)||(37761575-37761710)
chr4 (29-156)||(29993777-29993904)
chr4 (55-156)||(7977527-7977629)
chr4 (39-156)||(54001122-54001236)
chr4 (70-156)||(47846102-47846188)
chr4 (39-156)||(21694906-21695022)
chr4 (19-94)||(17182658-17182733)
chr4 (29-156)||(14539383-14539514)
chr4 (18-92)||(45741885-45741959)
chr4 (21-94)||(44145771-44145844)
chr4 (29-89)||(46007879-46007939)
chr4 (23-94)||(54935067-54935139)
chr4 (21-104)||(27775581-27775659)
chr4 (69-156)||(51329906-51329992)
chr4 (70-156)||(11089627-11089713)
chr4 (23-88)||(31348500-31348565)
chr4 (23-92)||(49735468-49735537)
chr4 (60-156)||(17182520-17182618)
chr4 (21-92)||(54935244-54935315)
chr4 (23-94)||(56135749-56135820)
chr4 (29-91)||(2247977-2248039)
chr4 (21-91)||(47433885-47433955)
chr4 (20-90)||(47846233-47846303)
chr4 (32-85)||(16400809-16400862)
chr4 (62-127)||(35543346-35543411)
chr4 (19-92)||(37711298-37711371)
chr4 (217-266)||(49735469-49735518)
chr4 (222-266)||(37711139-37711183)
chr4 (60-156)||(44145842-44145938)
chr4 (222-266)||(49735691-49735735)
chr4 (93-149)||(51075215-51075271)
chr4 (222-266)||(54320633-54320677)
chr4 (222-266)||(56135750-56135794)
chr4 (25-92)||(6938283-6938350)
chr4 (23-90)||(21695065-21695132)
chr4 (20-91)||(26166934-26167005)
chr4 (30-81)||(35565565-35565616)
chr4 (21-92)||(54320609-54320680)
chr4 (23-113)||(6938401-6938491)
chr4 (222-264)||(46007900-46007942)
chr4 (21-67)||(49735692-49735738)
chr4 (23-92)||(1968534-1968603)
chr4 (23-156)||(24565346-24565479)
chr4 (230-266)||(1968566-1968602)
chr4 (222-266)||(31348520-31348564)
chr4 (222-266)||(37711322-37711366)
chr4 (230-266)||(54935068-54935104)
chr4 (222-266)||(54935268-54935312)
chr4 (80-156)||(55510281-55510356)
chr4 (23-94)||(7977670-7977741)
chr4 (96-155)||(9030328-9030387)
chr4 (21-92)||(45132670-45132741)
chr4 (222-265)||(47846255-47846298)
chr4 (224-266)||(26166938-26166980)
chr4 (23-57)||(35248703-35248737)
chr4 (19-113)||(36151729-36151822)
chr4 (20-90)||(47846440-47846510)
chr4 (17-91)||(54320429-54320502)
chr4 (39-152)||(8347315-8347427)
chr4 (58-91)||(11842344-11842377)
chr4 (39-92)||(24565519-24565572)
chr4 (225-266)||(41174547-41174588)
chr4 (217-266)||(44145774-44145823)
chr4 (220-265)||(54576329-54576374)
chr4 (109-156)||(56135860-56135904)
chr4 (222-266)||(5730831-5730875)
chr4 (224-264)||(5731032-5731072)
chr4 (234-266)||(5824902-5824934)
chr4 (222-266)||(7977696-7977740)
chr4 (23-91)||(17938284-17938352)
chr4 (220-260)||(35565565-35565605)
chr4 (222-266)||(36151577-36151621)
chr4 (23-67)||(37711138-37711182)
chr4 (20-52)||(41174353-41174385)
chr4 (234-266)||(45741891-45741923)
chr4 (68-104)||(45911325-45911361)
chr4 (230-266)||(53260719-53260755)
chr4 (230-266)||(54320436-54320472)
[»] scaffold0240 (1 HSPs)
scaffold0240 (23-156)||(17651-17782)
[»] chr6 (51 HSPs)
chr6 (31-156)||(10293359-10293484)
chr6 (29-156)||(26318416-26318543)
chr6 (38-152)||(34176586-34176700)
chr6 (21-148)||(9051532-9051659)
chr6 (23-156)||(4097235-4097368)
chr6 (70-156)||(31799032-31799118)
chr6 (23-156)||(3841196-3841330)
chr6 (31-104)||(23091121-23091195)
chr6 (29-92)||(9719037-9719100)
chr6 (19-94)||(15323221-15323296)
chr6 (86-153)||(15323339-15323406)
chr6 (19-94)||(15353360-15353435)
chr6 (86-153)||(15353477-15353544)
chr6 (70-156)||(25468446-25468532)
chr6 (23-92)||(14515473-14515542)
chr6 (96-153)||(15373672-15373729)
chr6 (24-156)||(10818327-10818459)
chr6 (23-91)||(16738172-16738239)
chr6 (23-94)||(23090995-23091066)
chr6 (23-92)||(9721138-9721207)
chr6 (23-92)||(10818229-10818298)
chr6 (21-90)||(12811157-12811226)
chr6 (217-266)||(23090996-23091045)
chr6 (222-266)||(14515474-14515518)
chr6 (21-93)||(31798916-31798988)
chr6 (29-92)||(4097688-4097751)
chr6 (21-104)||(14515634-14515717)
chr6 (29-92)||(19278213-19278275)
chr6 (29-91)||(19278040-19278102)
chr6 (223-264)||(9719034-9719075)
chr6 (225-266)||(10818230-10818271)
chr6 (217-266)||(15323226-15323275)
chr6 (217-266)||(15353365-15353414)
chr6 (217-266)||(30487307-30487356)
chr6 (222-266)||(9721139-9721183)
chr6 (20-92)||(33235948-33236020)
chr6 (23-90)||(30487306-30487373)
chr6 (232-266)||(4097236-4097270)
chr6 (29-94)||(5585307-5585373)
chr6 (222-264)||(19278236-19278278)
chr6 (29-87)||(31849116-31849174)
chr6 (23-100)||(665841-665917)
chr6 (22-87)||(666027-666092)
chr6 (45-94)||(2893019-2893068)
chr6 (225-266)||(9051734-9051775)
chr6 (24-89)||(9719208-9719273)
chr6 (60-156)||(30849951-30850045)
chr6 (232-264)||(7775959-7775991)
chr6 (222-266)||(10818415-10818459)
chr6 (222-266)||(12811179-12811223)
chr6 (222-266)||(14515670-14515714)
[»] scaffold0012 (1 HSPs)
scaffold0012 (29-156)||(184718-184845)
[»] scaffold0007 (1 HSPs)
scaffold0007 (29-152)||(242331-242454)
[»] scaffold0096 (1 HSPs)
scaffold0096 (20-91)||(6581-6652)
[»] scaffold0071 (1 HSPs)
scaffold0071 (71-152)||(53000-53081)
[»] scaffold0067 (3 HSPs)
scaffold0067 (23-92)||(39365-39434)
scaffold0067 (17-156)||(39180-39320)
scaffold0067 (222-266)||(39389-39433)
[»] scaffold0119 (3 HSPs)
scaffold0119 (30-94)||(30722-30786)
scaffold0119 (30-94)||(37390-37454)
scaffold0119 (73-156)||(37494-37577)
[»] scaffold0027 (1 HSPs)
scaffold0027 (29-104)||(121991-122065)
[»] scaffold0198 (2 HSPs)
scaffold0198 (29-91)||(3153-3215)
scaffold0198 (224-264)||(3150-3190)
[»] scaffold0095 (1 HSPs)
scaffold0095 (60-156)||(8258-8354)
[»] scaffold0262 (1 HSPs)
scaffold0262 (23-90)||(16296-16363)
[»] scaffold0018 (1 HSPs)
scaffold0018 (33-156)||(69216-69340)


Alignment Details
Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 10043489 - 10043363
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaaca 129  Q
    |||||||||||  ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10043489 gtttggattgattgtttaggaggaaaagggaggggaggactcacttttcttttttaaattacgaatattataaaatgatttttagaaaattgaattaaca 10043390  T
Q  130 acttgataaataatcatataatacttc 156  Q
    || | ||||||||||||||||||||||    
T  10043389 acattataaataatcatataatacttc 10043363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 33744190 - 33744319
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaat 119  Q
    |||||||| ||||||||| ||||||| ||| |||||||| ||||||||  ||||||||||||||||||||| | | ||||||||| ||||||| ||||||    
T  33744190 tttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaattatggacattataaaatgattttttgaaaat 33744289  T
Q  120 tgaattaacaacttgataaataatcatata 149  Q
    |||||||||||| |||||||| ||||||||    
T  33744290 tgaattaacaacatgataaatgatcatata 33744319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 10204822 - 10204687
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||  ||| |||||||||| ||||| ||||||||||||||||||||||||||| ||||  | |||| |||| |||||||| ||||||    
T  10204822 ttagggtgtgtttggaaagagagtttaggaggggaagggaggggaggacttacttttcttttttaatttacagacattaaaaaatgatttttaaaaaatt 10204723  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||| | |||||| |||||||||||||||    
T  10204722 gaattaacaacgtaataaatgatcatataatacttc 10204687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 34981056 - 34980921
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| |||||  || ||||||||| |||| ||||| ||||||||||||||||||||||||||||||| | | ||||||||| ||||| |||||||||    
T  34981056 ttagggtgtgttttaatggagggtttaagaggggaagggaggggaggacttacttttcttttttaaattatggacattataaaatgatttatagaaaatt 34980957  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    || |||||||| |||||||| || ||||||||||||    
T  34980956 gagttaacaacatgataaatgattatataatacttc 34980921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 12035936 - 12036067
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||| || ||||||||||| ||||| || |||||||||  ||||||||||||||||| ||| |||||||||  ||| ||||||||||||    
T  12035936 agggtgtgtttggatagatggtttaggaggggaagggagaggaggacttgtttttcttttttaaattatgaacattataaaattattattagaaaattga 12036035  T
Q  123 attaacaacttgataaataatcatataatactt 155  Q
    ||| ||||| |||||||| ||||||||||||||    
T  12036036 att-acaacatgataaattatcatataatactt 12036067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 15986622 - 15986756
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||  |||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||  | ||||||||| || ||||| ||||||    
T  15986622 ttagggtgtgtttggaaagagggtttaggaggggaagggaggggaggacttaattttcttttttaatttacagacattataaaatgacttttaaaaaatt 15986721  T
Q  121 gaattaacaacttgataaataatcatataatactt 155  Q
    ||||||||||| |   |||| ||||||||||||||    
T  15986722 gaattaacaacatttaaaatgatcatataatactt 15986756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 40305668 - 40305798
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||     |||| ||||||||||||||||||  | |||||||||  ||||||||||||||    
T  40305668 ttagggtgtgtttggatggagggtttaggaggggaagggaggg-----cttagttttcttttttaaattacagacattataaaataatttttagaaaatt 40305762  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||  |||||||| |||||||| ||||||    
T  40305763 gaattaacaatatgataaatgatcatatagtacttc 40305798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 14245088 - 14245157
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  14245088 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacg 14245157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 10043006 - 10043141
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaa 118  Q
    ||||||||| |||||| || ||||||||||||||| ||   | |||| ||||||||||||||| ||||||||  || |||| | ||  |||| |||||||    
T  10043006 ttttagggtgtgtttgaatcgagggtttaggaggaaaaatga-gggatgacttacttttctttcttaaattataaacattaaagaattatttctagaaaa 10043104  T
Q  119 ttgaattaacaacttgataaataatcatataatactt 155  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  10043105 ttgaattaacaacatgataaatgatcatataatactt 10043141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 6597837 - 6597920
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatac 153  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||| |||||||||| ||||||| |||||||| ||||||||||||    
T  6597837 ttacttttcttttttaaattacggacattgtaaaatgattttttgaaaattgaaataacaacatgataaatgatcatataatac 6597920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 6382564 - 6382454
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaaca 129  Q
    ||||||||||| |||||||||||| ||   |||| | |||||||||||||||| ||| ||||| | |||||||||   ||||||||||||||||||||||    
T  6382564 gtttggattgaaggtttaggaggataaaagagggaatgacttacttttcttttctaatttacggacattataaaatactttttagaaaattgaattaaca 6382465  T
Q  130 acttgataaat 140  Q
    || ||||||||    
T  6382464 acatgataaat 6382454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 26414893 - 26414962
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||||||||    
T  26414893 agggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacg 26414962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 21581185 - 21581058
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttctttttt-aaattacgaatattataaaaggatttttagaaaattgaattaa 127  Q
    ||||||||| |||||||||||||| ||||| ||||| | ||| ||||||||||||| |||||| | |  |||| |||  |||||||||||||||||||||    
T  21581185 tgtttggatggagggtttaggaggggaagggaggggtg-actaacttttctttttttaaattatggacgttatgaaataatttttagaaaattgaattaa 21581087  T
Q  128 caacttgataaataatcatataatacttc 156  Q
    |||| ||||||||  |||||| |||||||    
T  21581086 caacatgataaatgttcatatgatacttc 21581058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 15986868 - 15986797
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||| || |||||| ||||||||||||||||    
T  15986868 agggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaa 15986797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 11437190 - 11437050
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggac---ttacttttcttttttaaattacgaatattataaaaggatttttaga 115  Q
    ||||||||| | |||||||||||||||||| ||| ||||| | ||||||||   |||||||||||||||||| || ||| | ||||||| | |||||| |    
T  11437190 ttttagggtgtttttggattgagggtttagaaggggaagggaagggaggacgacttacttttcttttttaaaataggaacactataaaatgttttttaaa 11437091  T
Q  116 aaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||| || ||||| |  ||||||| ||| |||||||||||    
T  11437090 aaattaaaataacagcgcgataaatgatcgtataatacttc 11437050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 13634954 - 13634884
Alignment:
Q  24 gggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||  ||||||||| |||||||||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaa 13634884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 40305909 - 40305839
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacga 93  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| ||| | |||| |||||||||||||||    
T  40305909 agggtgtgtttggattgagggtttaggaggagaagggaggggagaactcatttttattttttaaattacga 40305839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 13634711 - 13634776
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaat 88  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  13634711 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 11436945 - 11437008
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||||    
T  11436945 tgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacg 11437008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 2550590 - 2550533
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaa 86  Q
    |||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||    
T  2550590 tgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 7544136 - 7544205
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||| | ||||| |||||||| || | |||||||||||||||||||    
T  7544136 agggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacg 7544205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 1658051 - 1657967
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggattttta 113  Q
    ||||||||| |||||||||||||| ||||| ||||||||  ||||||||| ||||||||||||| | | ||||||| | ||||||    
T  1658051 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgtttttta 1657967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 4373813 - 4373741
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||| |||||||||||||||||||||| | |||   || |||||| |||||||||||||||||||||||    
T  4373813 tttagggtgtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacg 4373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 2184062 - 2183943
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaa 118  Q
    ||||||||| ||||||||| ||||||||| |||| ||||  ||  |||| |||| ||||| | ||||||||||| | ||||||||| | | |||| ||||    
T  2184062 ttttagggtgtgtttggatggagggtttaagaggggaagatagaagagggcttatttttcctctttaaattacggacattataaaatgttatttaaaaaa 2183963  T
Q  119 ttgaattaacaacttgataa 138  Q
    ||||| ||||||| ||||||    
T  2183962 ttgaaataacaacatgataa 2183943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 14245292 - 14245221
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||||||  ||  ||||| |||||||||||||    
T  14245292 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacg 14245221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 16938477 - 16938548
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||||||  ||  ||||||||||||| |||||    
T  16938477 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacg 16938548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 13634910 - 13634955
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacacccc 267  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13634910 ccctcccctcccttcccctcctaaaccctcaatccaaacacacccc 13634955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 7544383 - 7544311
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||| ||| ||||||||| |||||||||||||| ||||||||||||||  ||  ||||| |||||||||||||    
T  7544383 tttaaggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacg 7544311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 10204576 - 10204644
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| ||||||||| |||||||||||||| ||||| ||| |||| || |||||| |||||||||||||    
T  10204576 agggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattac 10204644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 13634756 - 13634712
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  13634756 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 14245245 - 14245289
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  14245245 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14245289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 16938524 - 16938480
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  16938524 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 16938480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 40815297 - 40815365
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| |||||||||||| | ||||||||| ||||| | | ||||| ||||||||||||||||||||||    
T  40815297 agggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 5688590 - 5688633
Alignment:
Q  223 cctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  5688590 cctcccttcccttcccctcctaaaccctcaatccaaacacaccc 5688633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 8551491 - 8551550
Alignment:
Q  96 attataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatactt 155  Q
    ||||||||| |||||||| |||||| |||||||||| | |||||| ||||||||||||||    
T  8551491 attataaaatgatttttaaaaaattaaattaacaacattataaatgatcatataatactt 8551550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 14245132 - 14245089
Alignment:
Q  223 cctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  14245132 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14245089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 33744429 - 33744366
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||||||||||||||||||||  ||||| |||||||| || |||||| | ||||||||||||||    
T  33744429 tttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaa 33744366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 7544183 - 7544137
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  7544183 agccctcccctcccttcccttcctaaaccctcaatccaaacacaccc 7544137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 14684729 - 14684659
Alignment:
Q  22 tagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||| |||||||||| ||||||||||||| | ||  || ||||| |||||||||||||||| |||||||    
T  14684729 tagggtgtgtttggatttagggtttaggaggggcagagagaggagggcttacttttctttttttaattacg 14684659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 2550551 - 2550592
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacaca 263  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  2550551 ccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 10204626 - 10204577
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||| | ||||||||||||| |||||||| ||||||||||||||    
T  10204626 gtgagccctcacctcccttcccctcctaaaccctcgatccaaacacaccc 10204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 10476275 - 10476202
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacga 93  Q
    |||||||| ||||||||| |||||||||||||| ||||| |||||||   |||||| |  ||||||||||||||    
T  10476275 tttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacga 10476202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 15986818 - 15986867
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  15986818 gtgagccctcctcttccttcccctcctaaaccctcaatccaaacacaccc 15986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 20513681 - 20513612
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||| | |||   | || |||| |||||||||||||||||||||||    
T  20513681 agggtgtgtttggattgagggtttaggaagcgaaaagaaggaaggatttacttttcttttttaaattacg 20513612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 8551656 - 8551592
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacga 93  Q
    |||||||||||| ||||||||||| ||||  ||||| || || |||||| |||||||||||||||    
T  8551656 tgtttggattgaaggtttaggaggggaagagagggggggtctcacttttattttttaaattacga 8551592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 10476026 - 10476090
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaa 87  Q
    ||||| |||||| ||||||||||||||||| ||||| | | ||||  ||||||||||||||||||    
T  10476026 agggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 10476071 - 10476027
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||    
T  10476071 ccctctcatcccttcccctcctaaaccctcaattcaaacacaccc 10476027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 16502030 - 16501966
Alignment:
Q  29 tgtttggattgagggtttaggaggagaag-gaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||||||||||||||||||  ||| || |||||| | |||||||| ||||||||||||||    
T  16502030 tgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacg 16501966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 20147077 - 20147113
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20147077 tcccttcccctcctaaaccctcaatccaaacacaccc 20147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 26414938 - 26414894
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||||    
T  26414938 ccctcccctcccttctcctcctaaaccctcaatccaaacacaccc 26414894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 36363270 - 36363182
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaa 117  Q
    ||||||||| |||||||||||||| ||||| ||| |||   | ||||||| ||||||||||||| ||| ||||||| |  |||||||||    
T  36363270 tgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttttagaaa 36363182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 1658012 - 1658055
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||    
T  1658012 ccctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 5688636 - 5688589
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggagga 68  Q
    ||||||| |||||||||||||||||||||||| ||||| | |||||||    
T  5688636 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagga 5688589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 10043264 - 10043323
Alignment:
Q  35 gattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||||| |||||| |||| ||||| |||||| |||| |||||| ||||||||||||||||    
T  10043264 gattgatggtttatgaggggaagggaggggatgactcacttttattttttaaattacgaa 10043323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 42681454 - 42681509
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttctttttt 84  Q
    ||||||||||||||||||| |||| ||| | ||||||||| |||||||| ||||||    
T  42681454 tgtttggattgagggtttaagaggggaaaggaggggaggatttacttttttttttt 42681509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 10476229 - 10476271
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||    
T  10476229 ctcccctcccttcccctcctaaaccctccatccaaacacaccc 10476271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 11436986 - 11436944
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaacac 262  Q
    ||||||||  ||||||||||||| |||||||||||||||||||    
T  11436986 agccctcctctcccttcccctcctaaaccctcaatccaaacac 11436944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 34980803 - 34980881
Alignment:
Q  16 aaattttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| || ||| |||||||||||| ||||||||||| ||||| |||| |||  | ||||||  |||||||||||||||    
T  34980803 aaattctaaggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaa 34980881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 40305866 - 40305908
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||    
T  40305866 ctcccctcccttctcctcctaaaccctcaatccaaacacaccc 40305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 15858986 - 15858913
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||| |||||| ||||||| ||| ||||| ||||| |||||| |||| || ||| |||| |||||||||||    
T  15858986 ttagggtgtgtttgaattgaggctttgggaggtgaagggaggggatgactcacatttattttctaaattacgaa 15858913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 20147114 - 20147050
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||| ||||      ||||||||| |||||||||||||    
T  20147114 agggtgtgtttggattgagggtttaggaggggaagggagggt-----ttacttttcatttttaaattacg 20147050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 33744387 - 33744436
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||| |||||||  |||| |||||||||||||||| ||||||    
T  33744387 gtgagccctcccctcccttcatctcctaaaccctcaatccaaatacaccc 33744436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 5688572 - 5688524
Alignment:
Q  108 tttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||||||||||||||| ||||  || || ||||||||||||    
T  5688572 tttttagaaaattgaattaacaacatgattgatgatgatataatacttc 5688524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 14681505 - 14681473
Alignment:
Q  232 ccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||||||||| |||||||||||||||||||||    
T  14681505 ccttcccctcctaaaccctcaatccaaacacac 14681473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 14681476 - 14681508
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaag 61  Q
    |||||||||||||||||||||||| ||||||||    
T  14681476 tgtttggattgagggtttaggaggggaaggaag 14681508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 34980860 - 34980812
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    |||| |||| || ||||||||||||| ||||| ||||||||||||||||    
T  34980860 gtgaacccttccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 40305707 - 40305671
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  40305707 tcccttcccctcctaaaccctccatccaaacacaccc 40305671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 28074103 - 28074236
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| |||||||||||| ||||||||||| ||||| ||||||| ||| ||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  28074103 agggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaatgatttttagaaaattga 28074202  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||||| |||||||||||||||    
T  28074203 attaacaacctgataaatgatcatataatacttc 28074236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 36267551 - 36267686
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||||| |||| ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  36267551 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaatgatttttagaaaatt 36267650  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    |||| |||||  |||||||| |||||||||||||||    
T  36267651 gaatcaacaatatgataaatgatcatataatacttc 36267686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 33519294 - 33519159
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||  ||||||||||| ||||||||||  | ||||||||| |||||||||||||||    
T  33519294 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaatt 33519195  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||| |||||||| |||||||||||||||    
T  33519194 gaattaacaacatgataaatgatcatataatacttc 33519159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 48881556 - 48881691
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||| | |||||||||||||||||||||||| | |||||||||  ||||| ||||||||    
T  48881556 ttagggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataattttcagaaaatt 48881655  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||| |||||||| || ||||||| ||||    
T  48881656 gaattaacaacatgataaatgattatataatgcttc 48881691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 35422198 - 35422075
Alignment:
Q  33 tggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaact 132  Q
    ||||||||||||||||||||  ||   || |||||  |||||||||||||| |||||||| | |||||||||  |||||||||||||||||||||||||     
T  35422198 tggattgagggtttaggagggaaatagagtggagggtttacttttctttttaaaattacggacattataaaataatttttagaaaattgaattaacaaca 35422099  T
Q  133 tgataaataatcatataatacttc 156  Q
    | |||||||||||||| |||||||    
T  35422098 taataaataatcatatgatacttc 35422075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 21857549 - 21857462
Alignment:
Q  64 gaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataata 152  Q
    |||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||| ||||    
T  21857549 gaggacttacttttctcttttaa-ttacgaacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatacaata 21857462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 37926088 - 37925952
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaat 119  Q
    |||| ||| |||| ||||||| | ||||||| | ||||| ||||||||||| | ||||||||| ||||||||| | ||||||||| ||| ||||||||||    
T  37926088 tttaaggtgtgttaggattgaagatttaggaagggaagggaggggaggactcatttttcttttctaaattacggacattataaaatgatgtttagaaaat 37925989  T
Q  120 tgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||| ||||  || || ||||||||||||    
T  37925988 tgaattaacaacatgattgatgatgatataatacttc 37925952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 151
Target Start/End: Complemental strand, 48015451 - 48015323
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||||||||||||| ||||| |||||||| ||||| ||  |||  |||||||||| ||||||||||||  |  ||||||||  |||||| |||||||||    
T  48015451 agggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattacagactttataaaataatttttggaaaattga 48015352  T
Q  123 attaacaacttgataaataatcatataat 151  Q
    ||||||||| |||||||| ||||||||||    
T  48015351 attaacaacatgataaatgatcatataat 48015323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 30592261 - 30592386
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaa 130  Q
    ||||||| |||| |||||||||  |||| | |||||| |||||||||||||||||||||||  | | ||||||| |||||||| ||||||||| |||  |    
T  30592261 tttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaataatca 30592360  T
Q  131 cttgataaataatcatataatacttc 156  Q
      ||||||||||||||||||||||||    
T  30592361 tatgataaataatcatataatacttc 30592386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 2087783 - 2087859
Alignment:
Q  67 gacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataat 143  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||| |||| |||||||||||| |||||||||||    
T  2087783 gacttacttttcttttttaaattacggatattataaaataatttttaaaaaaatgaattaacaacatgataaataat 2087859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 39646676 - 39646580
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||| |||| |||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||  || || ||||||||||||    
T  39646676 aggggatgactcacttttattttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgattgatgatgatataatacttc 39646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 37621012 - 37620885
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| ||||||||  || | ||||| ||||||||  || |||||||||||||||||| | | ||||||||| ||||||| ||||||||||||| |    
T  37621012 tgtttggatggagggtttgagaagggaagggaggggagggtttgcttttcttttttaaattatggacattataaaatgatttttggaaaattgaattatc 37620913  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| |||||||  || ||||||||||||    
T  37620912 aacatgataaaagattatataatacttc 37620885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 3215900 - 3215993
Alignment:
Q  62 gggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||| |||| |||||||||| ||||||| ||  |||||||| |||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  3215900 gggagggcttagttttctttttcaaattacaaac-ttataaaatgatttttagaaaattgaattaacaatatgataaatgatcatataatacttc 3215993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 39856109 - 39856040
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  39856109 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacg 39856040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 16833945 - 16833806
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac-gaat--attataaaaggatttttagaa 116  Q
    |||||||| |||||||||  ||| |||| |||| ||||||||| ||||| |||||||||||||| ||||||| || |  ||||||| |  ||||||| ||    
T  16833945 tttagggtgtgtttggatgcaggatttaagaggggaaggaaggagaggagttacttttctttttaaaattacagacttcattataatataatttttataa 16833846  T
Q  117 aattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||| ||| |||||||| ||||| |||||||||    
T  16833845 aattgaattaataacatgataaatgatcatgtaatacttc 16833806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 1051742 - 1051671
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||||||||||||||| ||||| ||| ||||| ||| |||||||||||||||||||||    
T  1051742 agggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaa 1051671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 31364070 - 31364175
Alignment:
Q  48 ggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcata 147  Q
    ||||| ||||| |||||||  |||||||||||||| ||||||||| | ||||||||| |||||| |||||||||||| ||| ||   |||||| ||||||    
T  31364070 ggaggggaagggaggggagagcttacttttcttttctaaattacggacattataaaatgattttaagaaaattgaatcaacgac---ataaatgatcata 31364166  T
Q  148 taatacttc 156  Q
    |||||||||    
T  31364167 taatacttc 31364175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 34228565 - 34228494
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| |||||| ||||| ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  34228565 ttagggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacg 34228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 37925841 - 37925912
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||  | |||||| ||||||||||||||||    
T  37925841 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaa 37925912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 8122141 - 8122215
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||||||| |||||| ||||||  ||||||||||||||| |||||| |||| |||||| ||||||||||||||||    
T  8122141 tttagggtgtgtttgaattgagaatttaggaggagaagggaggggaagactcacttttattttttaaattacgaa 8122215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 47390852 - 47390922
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    |||||||| ||||||||||||||| |||||||| ||||| || |||||  |||||||||||||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 18231830 - 18231697
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||| ||| |||||||||| ||||| ||||||||| ||||||||| |||||||||||| || | ||| ||| | |||||| ||| || |    
T  18231830 agggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaa 18231731  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
      ||  ||| |||||||  |||||||||||||||    
T  18231730 catattaacatgataaacgatcatataatacttc 18231697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 4833531 - 4833599
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||||||  ||||||||| ||||||||||||    
T  4833531 agggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattac 4833599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 13770945 - 13771017
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||| |||||||||||||| ||||||||| ||||| ||||||||| |||||| |  |||||||||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacg 13771017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 31571713 - 31571645
Alignment:
Q  24 gggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||| |||||||||||||||||||||||| ||||  |||||||   |||||||||||||||||||||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacg 31571645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 33519054 - 33519142
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaa 117  Q
    ||||||||| |||| ||||||||| ||||| |||||||| || |||||| |||||||||||||||| | ||||||| | ||||| ||||    
T  33519054 tgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaa 33519142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 36267797 - 36267729
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||| || | |||| |||||||||||||    
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattac 36267729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 36267748 - 36267796
Alignment:
Q  218 tgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36267748 tgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 36267796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 48013710 - 48013622
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatat 148  Q
    |||||||  |||||||||| ||||||||| ||  |  ||||||||  ||||||||||||||||||||||||| |||||||| |||||||    
T  48013710 aggggagagcttacttttcgtttttaaatcacagactttataaaataatttttagaaaattgaattaacaacatgataaatgatcatat 48013622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 33655356 - 33655285
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    |||||| || |||||||||||||||||||||||| ||||  ||| ||||  |||||||||||||||||||||    
T  33655356 ttttagagtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 40196530 - 40196665
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| |||||||| ||||| ||||| || |||||  ||||||||| ||||| ||||||| | | ||||||| | ||| || ||| ||    
T  40196530 ttagggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagtt 40196629  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
     |  || |||| ||||||| ||||||||||||||||    
T  40196630 aacatatcaacctgataaacaatcatataatacttc 40196665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 41496955 - 41497026
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||| || ||||||||  |||||||||||||    
T  41496955 ttagggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacg 41497026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 48094100 - 48094005
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatactt 155  Q
    ||||||||| |||||||||||||||||||||||||   |||||||   |||||| | ||||||| ||| ||  |||||||| ||||||||||||||    
T  48094100 aggggaggatttacttttcttttttaaattacgaacgctataaaatcttttttatagaattgaaataataaaatgataaatgatcatataatactt 48094005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 39646466 - 39646536
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    |||||||| |||||||||||| ||||||||||  ||||| ||||||||| | |||||| ||||||||||||    
T  39646466 tttagggtgtgtttggattgacggtttaggagaggaagggaggggaggaatcacttttattttttaaatta 39646536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 37925891 - 37925842
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  37925891 gtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 37925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 39856064 - 39856108
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  39856064 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 39856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 40282195 - 40282263
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatt 89  Q
    ||||||| |||||||||||||||||||||||| ||||| || |||||  ||  ||||||||||||||||    
T  40282195 ttagggtatgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 8122319 - 8122264
Alignment:
Q  96 attataaaaggatttttagaaaattgaattaacaacttgataaataatcatataat 151  Q
    |||||||||  ||||||||||||||||||||||||  |||||||| ||||||||||    
T  8122319 attataaaataatttttagaaaattgaattaacaagatgataaattatcatataat 8122264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 23116298 - 23116393
Alignment:
Q  62 gggaggacttacttttcttttttaaattacgaatattataaaag-gatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||| |||||||||||||||||||||||  | | |||||||| | || ||| ||||||||| || |||| |||||||| || ||||||||||||    
T  23116298 gggagggcttacttttcttttttaaattacagacactataaaagtgtttattaaaaaattgaaatagcaacatgataaatgattatataatacttc 23116393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 25887190 - 25887257
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaat 88  Q
    ||||||| ||||||||||||||||||| |||| ||||| ||||||||| ||  ||||||||| |||||    
T  25887190 ttagggtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaat 25887257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 43230242 - 43230305
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||||| ||||||| |||   |||||||||||||  |||||||||||||||||||||||    
T  43230242 tgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattacg 43230305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 28074354 - 28074308
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggagg 67  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||||    
T  28074354 ttagggtgtgtttggattgagggtttaggagaggaaggaaggggagg 28074308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 32872828 - 32872862
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaa 104  Q
    |||||||||||||||||||||||||||||||||||    
T  32872828 ttacttttcttttttaaattacgaatattataaaa 32872862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 36267600 - 36267554
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  36267600 agccctcccctcccttcccctcctaaaccctccatccaaacacaccc 36267554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 47230067 - 47229998
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttact--tttcttttttaa 86  Q
    ||||| ||| |||||| |||||||||||||||||| |||| ||||||||| |||||  ||||||||||||    
T  47230067 ttttaaggtgtgtttgaattgagggtttaggaggaaaagggaggggaggatttacttctttcttttttaa 47229998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 4835479 - 4835548
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| ||||| |||||||||||||||||   |||| ||||| |  ||||||||||||||||||||||||    
T  4835479 agggtgtgtttagattgagggtttaggagagaaagggaggggtgtgcttacttttcttttttaaattacg 4835548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 12670928 - 12670969
Alignment:
Q  115 aaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  12670928 aaaattgaattaacaacatgataaatgatcatataatacttc 12670969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 13771190 - 13771121
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| ||||| |||||||||||||||||| ||||| ||| |||   ||||||||| |||||||||||||    
T  13771190 agggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacg 13771121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 37620817 - 37620776
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  37620817 ctcccctcccttcccctcccaaaccctcaatccaaacacacc 37620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 1051705 - 1051741
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1051705 tcccttcccctcctaaaccctcaatccaaacacaccc 1051741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 33519247 - 33519291
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  33519247 ccctcccctcccttcccctcctaaaccctccatccaaacacaccc 33519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 7791878 - 7791831
Alignment:
Q  108 tttttagaaaattgaattaacaacttgataaataatcatataatactt 155  Q
    ||||| |||||||||| ||| ||| |||||||||||||||||||||||    
T  7791878 ttttttgaaaattgaaataaaaacatgataaataatcatataatactt 7791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 13770992 - 13770949
Alignment:
Q  223 cctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||    
T  13770992 cctcccctcccttcccctcctaaatcctcaatccaaacacaccc 13770949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 18795832 - 18795758
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaa 104  Q
    ||||||||||||| |||||| ||| |||||| ||| ||| |||  ||||||||||||||||||||| | |||||||    
T  18795832 tgtttggattgagagtttagaaggggaaggaggggaagg-cttgattttcttttttaaattacgaacaatataaaa 18795758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 25887236 - 25887193
Alignment:
Q  223 cctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| ||||||||||||  |||||||||||||||||||||||    
T  25887236 cctcccctcccttcccctcataaaccctcaatccaaacacaccc 25887193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 41008188 - 41008251
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||||||||||||  |||| ||||| ||||||| | ||  |||||||||||||||||||    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattacg 41008251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 28074146 - 28074104
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||    
T  28074146 ctcccctcccttcccctcctaaaccttcaatccaaacacaccc 28074104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 31364251 - 31364285
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||||||||||| |||||||||||||||||||||    
T  31364251 tcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 31571671 - 31571713
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| || |||||||||| |||||||||||||||||||||||    
T  31571671 ctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 48881605 - 48881559
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| |||| ||||||||||||| |||||||| ||||||||||||||    
T  48881605 agccatcccctcccttcccctcctaaaccctccatccaaacacaccc 48881559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 48881758 - 48881792
Alignment:
Q  232 ccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||| |||||||||||||||||||||||    
T  48881758 ccttcccctcctaaaccctcaatccaaacacaccc 48881792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 12670572 - 12670633
Alignment:
Q  62 gggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaa 123  Q
    |||||||| |||||||||||||||||||||  || |||||| |  ||| |||||||||||||    
T  12670572 gggaggacatacttttcttttttaaattacagattttataatataattgttagaaaattgaa 12670633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 28074302 - 28074351
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||| | |||||| |||| |||||||||||||||||||||||    
T  28074302 gtgatccctccccttccttcctctcctaaaccctcaatccaaacacaccc 28074351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 33519098 - 33519053
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacac 262  Q
    |||||||||||| ||||||||||||| ||| |||| ||||||||||    
T  33519098 gtgagccctcccctcccttcccctcctaaaacctccatccaaacac 33519053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 41496999 - 41496958
Alignment:
Q  225 tcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||||||||| |||||||| ||||||||||||||    
T  41496999 tcccctcccttcccctcctaaaccctccatccaaacacaccc 41496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 4833576 - 4833532
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||| ||||||||| ||||    
T  4833576 ccctcccctcccttcccctcctaaaccctccatccaaacataccc 4833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 13425120 - 13425188
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| ||||||||| |||||||||||||| |||||||| ||| |  ||| ||||  ||||||||||||    
T  13425120 agggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattac 13425188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 13771153 - 13771189
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  13771153 tcccttcccctcctaaaccctcaatctaaacacaccc 13771189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 23116466 - 23116418
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttactttt 77  Q
    ||||||||  ||||||||| |||| ||||| ||||||||||||||||||    
T  23116466 tgtttggaccgagggtttacgaggggaagggaggggaggacttactttt 23116418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 40196569 - 40196533
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  40196569 tcccttcccctcccaaaccctccatccaaacacaccc 40196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 40282234 - 40282198
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  40282234 tcccttcccctcctaaaccctcaatccaaacataccc 40282198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 47390892 - 47390856
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| || ||||||||||||||||||||    
T  47390892 tcccttcccctcctaacccctcaatccaaacacaccc 47390856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 12022140 - 12022276
Alignment:
Q  21 ttagggtttgtttggattgagggttt-aggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaat 119  Q
    ||||||| |||| |||| |||||||| || ||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  12022140 ttagggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacgaacattataaaatgatttttagaaaat 12022239  T
Q  120 tgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||| |||||||| |||||||||||||||    
T  12022240 tgaattaacaacatgataaatgatcatataatacttc 12022276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 43732933 - 43732798
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||  ||||||||||||||||||||||| | ||||||||| ||||||| |||||||    
T  43732933 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgattttttgaaaatt 43732834  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||  |||||||| |||||||||||||||    
T  43732833 gaattaacaatatgataaatgatcatataatacttc 43732798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 8815139 - 8815274
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| |||||||||||||| ||||  ||| || |||||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  8815139 ttagggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggacattataaaatgatttttagaaaatt 8815238  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    |||| |||||| |||||||| || ||||||||||||    
T  8815239 gaatcaacaacatgataaatgattatataatacttc 8815274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 16024391 - 16024265
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| |||| ||||||||| ||||| |||||||   |||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  16024391 tgtttggatggaggatttaggaggggaagggaggggagagtttacttttcttttt-aaattacggacattataaaatgatttttagaaaattgaattaac 16024293  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| |||||||| |||||||||||||||    
T  16024292 aacatgataaatgatcatataatacttc 16024265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 6453408 - 6453295
Alignment:
Q  43 gtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataa 142  Q
    |||||| ||| |||||||||||||||||| |||||| |||||||||||| |  ||||||||| |||||||||||||||||||||| ||| |||||| |||    
T  6453408 gtttagaaggggaaggaaggggaggacttgcttttcctttttaaattacaatcattataaaatgatttttagaaaattgaattaataacatgataagtaa 6453309  T
Q  143 tcatataatacttc 156  Q
    ||||||||||||||    
T  6453308 tcatataatacttc 6453295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 29937740 - 29937614
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| ||||||||| |||  || ||||||| || || ||||||||||||| |||||| | | ||||||||| |||||||||||||||||||||||    
T  29937740 tgtttggatggagggtttaagagtggagggaagggaagaacatacttttctttttaaaattatggacattataaaatgatttttagaaaattgaattaac 29937641  T
Q  129 aacttgataaataatcatataatactt 155  Q
    ||| |||||||| ||||||||||||||    
T  29937640 aacatgataaatgatcatataatactt 29937614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 34196553 - 34196420
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    |||||||  |||||||| |||||||||||||| |||||  ||||||| ||||||||||||||| |||||||  | ||||||||| |||||||||||||||    
T  34196553 ttagggtgcgtttggatggagggtttaggaggggaaggg-ggggagggcttacttttcttttt-aaattacagacattataaaatgatttttagaaaatt 34196456  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||  ||||||  |||||||||||||||    
T  34196455 gaattaacaacaagataaacgatcatataatacttc 34196420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 30365374 - 30365241
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||| |||| ||||| |||  |||| |||||||| ||| |||||||||||||||||||  | ||||| ||| |||||||||||||||||    
T  30365374 agggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattacagacattatgaaatgatttttagaaaattga 30365275  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||||| || |||||| |||||    
T  30365274 attaacaacatgataaatgattatataacacttc 30365241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 20472729 - 20472825
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||| ||| |||||||||||||||||||||||  | |||||||||  | ||||||||||||||||||||||  ||||| || |||||||||||||||    
T  20472729 agggaagggcttacttttcttttttaaattacagacattataaaataaattttagaaaattgaattaacaatatgatatatgatcatataatacttc 20472825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 40632992 - 40633106
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaa 118  Q
    ||||||||| |||||| || |||||||||||||| ||||| || ||||| |||||||||       |||||||| | |||||||||  ||||||||||||    
T  40632992 ttttagggtgtgtttgaatggagggtttaggaggggaagggagaggagggcttactttt-------aaattacggacattataaaataatttttagaaaa 40633084  T
Q  119 ttgaattaacaacttgataaat 140  Q
    ||||||||||||| ||||||||    
T  40633085 ttgaattaacaacatgataaat 40633106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 31543319 - 31543249
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    |||||||| ||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 9933448 - 9933356
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataata 152  Q
    ||||||||  |||||||||||||||||| |  | | ||||||||| |||||| | ||||||||||||||||| |||||||| |||||||||||    
T  9933448 aggggagggtttacttttcttttttaaaatttggacattataaaatgattttaaaaaaattgaattaacaacatgataaatgatcatataata 9933356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 43732679 - 43732747
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| |||||||||||||||||||||||| ||||| || |||||||| |||||| |||||||||||||    
T  43732679 agggtgtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattac 43732747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 9718723 - 9718656
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||| |||||||||||||||||||||||||||||| ||||||    |||||||||||||||||||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 1281147 - 1281212
Alignment:
Q  27 tttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||||||||||||||||||| ||||| | | ||||  |||||||||||||||||||||||    
T  1281147 tttgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacg 1281212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 8671839 - 8671927
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttg--ataaataatcatataatacttc 156  Q
    ||||||||  ||||||||||||| | ||||||||| |||||||||||||||||||||||||  ||  | |||| |||||||||||||||    
T  8671839 ttactttttctttttaaattacggacattataaaatgatttttagaaaattgaattaacaatatgaaaaaaatgatcatataatacttc 8671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 12022387 - 12022318
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||| | |||||||| || |||||| ||||||||||||||    
T  12022387 agggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacg 12022318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 8672041 - 8671965
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaata 96  Q
    |||||||| |||||||||||||| ||||| ||| ||||| |||||| |||||| |||| ||||||||||||| ||||    
T  8672041 tttagggtgtgtttggattgaggatttagaaggggaaggtaggggatgacttaattttattttttaaattacaaata 8671965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 30365126 - 30365201
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||   | ||||||  |||||||||||||||    
T  30365126 ttttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaa 30365201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 11575644 - 11575582
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||||| ||||||||||| ||||||| ||||||||  ||||||||| ||||||||||||    
T  11575644 tgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 7394699 - 7394634
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||||||||||||||||||||||| ||||| |||||| |  | |||||| ||||||||||||||||    
T  7394699 tgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacgaa 7394634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 12022337 - 12022386
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  12022337 gtgagccctcccctcctttcccctcctaaaccctcaatccaaacacaccc 12022386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 13404976 - 13405041
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaat 88  Q
    ||||| || ||||||||||||||||||||| ||||| | ||||| | |||||||||||||||||||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaat 13405041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 24243050 - 24243180
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||| ||| ||||| |||| ||||| | |||| |||||||||||| |||| |||||||||  | ||||||| |  ||||| ||||||||    
T  24243050 agggtgtgtttggatggagagtttaagagg-gaagggaagggatgacttacttttcattttgaaattacgac-actataaaatgtctttta-aaaattga 24243146  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    | ||| ||| |||||||| |||||||||||||||    
T  24243147 aataataacatgataaatgatcatataatacttc 24243180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 31543072 - 31543141
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| ||||||||| ||||||||| |||| ||||| ||||||||  ||||||||| |||||||||||||    
T  31543072 agggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacg 31543141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 43826492 - 43826443
Alignment:
Q  107 atttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  43826492 atttttagaaaattgaattaacaacatgataaatgatcataaaatacttc 43826443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 9434360 - 9434432
Alignment:
Q  85 aaattacgaatattataaaagga-tttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||| |||||||||||  | |||||| ||||||||||||||||| |||||||| || ||||||||||||    
T  9434360 aaattacggatattataaaaataatttttaaaaaattgaattaacaacatgataaatgataatataatacttc 9434432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 39449511 - 39449415
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||| ||||| || ||||||||| |||   |  ||||||||  ||||||| ||||||||||||||||| |||| ||| |||||||||||||||    
T  39449511 aggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaattaacaacatgattaatgatcatataatacttc 39449415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 7503202 - 7503131
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||||||| |||||||||||||| ||| ||||| || || ||||||||  ||||||||| |||||||||||    
T  7503202 ttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaatta 7503131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 8815385 - 8815314
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||||||||||||||| | ||| ||||||||  | ||||||  |||||||||||||||    
T  8815385 agggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacgaa 8815314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 16024159 - 16024242
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggattttt 112  Q
    |||||||||||||||||||||| | ||||| |||||||  || | ||||  ||||||||||||||| | ||||||| |||||||    
T  16024159 tgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttt 16024242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 31738669 - 31738598
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| ||||||||| |||||||||||||| |||| |||||||||  |||  |||| |||||||||||||    
T  31738669 ttagggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacg 31738598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 36309081 - 36309018
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||| |||||||||||||| ||||| ||||||||  ||||||||| | |||||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacg 36309018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 13405019 - 13404977
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  13405019 ctcccatcccttcccctcctaaaccctcaatccaaccacaccc 13404977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 1027092 - 1027023
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||| ||||||||||| | ||||| |||| |||  | |||||||||||||||||||||    
T  1027092 agggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacg 1027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 8815335 - 8815384
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||| ||||| ||||||| |||||||||||||||||||||||    
T  8815335 gtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccc 8815384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 11033646 - 11033585
Alignment:
Q  39 gagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattat 100  Q
    |||||||||||||||||||| ||| || || |||||||||  |||||||||| |||||||||    
T  11033646 gagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattat 11033585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 30582033 - 30581988
Alignment:
Q  47 aggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||    
T  30582033 aggaggggaagggaggggagggcttacttttcttttttaaattacg 30581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 43732729 - 43732680
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| |||||  ||||||||||||| |||||||||||||||||||||||    
T  43732729 gtgagtcctcctctcccttcccctcctaaaccctcaatccaaacacaccc 43732680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 7979137 - 7979209
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||| | |||||||||||||||||||| ||  ||||| || ||||   |||||||||||||||||||||||    
T  7979137 tttaggatgtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacg 7979209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 31543271 - 31543315
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||    
T  31543271 ccctcccctcccttcccctcctaaaccctcaatcgaaacacaccc 31543315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 43732886 - 43732930
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  43732886 ccctcccctcccttcccctcctaaaccctccatccaaacacaccc 43732930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 1281188 - 1281149
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaaca 261  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  1281188 ccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 2248450 - 2248521
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| ||||||||||||| |||||||||| ||||| |||||||   | | ||| |||||||||||||||    
T  2248450 ttagggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacg 2248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 9933240 - 9933311
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||| ||||||||||||||| | |||| || | | |||||| | ||||||||||||||    
T  9933240 agggtgtgtttggattgaaggtttaggaggagaaaggagggaagaattcacttttatattttaaattacgaa 9933311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 16024202 - 16024155
Alignment:
Q  218 tgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    ||||| ||||| ||||||||| ||| ||||||||||||||||||||||    
T  16024202 tgagctctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 16652994 - 16652959
Alignment:
Q  231 cccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| |||||||||||||||||||||||||||||||    
T  16652994 ccctccccctccaaaaccctcaatccaaacacaccc 16652959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 2248495 - 2248453
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||    
T  2248495 ctcccctcccttcccctcctaaactctcaatccaaacacaccc 2248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 5541871 - 5541945
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaa 104  Q
    |||||||||||| |||||| ||||||||  | |||| ||| || ||||| ||||||||||||||| | |||||||    
T  5541871 gtttggattgagagtttagaaggagaagagaagggatgacatatttttcatttttaaattacgaacaatataaaa 5541945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 6453190 - 6453256
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttactttt-cttttttaaattacgaata 96  Q
    |||||||||||||||| |||| | |||| |||||| |||| ||||||  ||||||||||||||||||    
T  6453190 tttggattgagggtttgggagaaaaagggaggggaagactcacttttatttttttaaattacgaata 6453256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 7394663 - 7394701
Alignment:
Q  225 tcccatcccttcccctccaaaaccctcaatccaaacaca 263  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  7394663 tcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3726859 - 3726932
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||| ||||||||| |||||||||||||| ||||| |  ||| |  ||| ||||| |||||||||||||    
T  3726859 ttttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacg 3726932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 9718681 - 9718722
Alignment:
Q  225 tcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||| ||||| |||||||||||||||||||||||    
T  9718681 tcccctcccttctcctcctaaaccctcaatccaaacacaccc 9718722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 11033416 - 11033482
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaat 88  Q
    |||||||| |||||||||||||||||||| ||  ||||| ||||  ||  |||||||||||||||||||    
T  11033416 tttagggtgtgtttggattgagggtttagaagaggaagggaggg--gggtttacttttcttttttaaat 11033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 20472930 - 20472865
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||||||||||| ||||||| |||  |||| | || |||||| |||||| ||||||||||||||||    
T  20472930 tgtttggattgaaggtttagaagggaaagggaaggaaggactcacttttattttttaaattacgaa 20472865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 3726900 - 3726864
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  3726900 tcccttcccctcctaaaccctccatccaaacacaccc 3726864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 4247727 - 4247763
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  4247727 tcccttcccctcctaaaccttcaatccaaacacaccc 4247763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 6315066 - 6315102
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaagga 59  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  6315066 agggtgtgtttggattgagggtttaggaggcgaagga 6315102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 7503153 - 7503197
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| |||| |||||||| ||| |||||||||||||||||||    
T  7503153 ccctcccctcccctcccctcccaaagcctcaatccaaacacaccc 7503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 22591501 - 22591541
Alignment:
Q  116 aaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||| |||||||| |||||||||||||||    
T  22591501 aaattgaatgaacaacatgataaatgatcatataatacttc 22591541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 34634342 - 34634386
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| ||||||||||||||| |||| ||| ||||||||||||||    
T  34634342 ccctcacatcccttcccctcctaaactctccatccaaacacaccc 34634386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 41103549 - 41103505
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||    
T  41103549 ccctcccctctcttcccctcctaaaccctccatccaaacacaccc 41103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 42813864 - 42813732
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| |||||||||  ||||||||||||| ||||  |||||| | |||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  42813864 agggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatgatttttagaaaattga 42813765  T
Q  123 attaacaacttgataaataatcatataatactt 155  Q
    ||||||||| |||||||||||||||||||||||    
T  42813764 attaacaacctgataaataatcatataatactt 42813732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 45257555 - 45257418
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaa 118  Q
    ||||||||| ||||||||| |||| ||||||| | ||||| ||| || |  ||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  45257555 ttttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaa 45257456  T
Q  119 ttgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||  |||||||| |||||||||||||||    
T  45257455 ttgaattaacaatatgataaatgatcatataatacttc 45257418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 31061598 - 31061474
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttctt-ttttaaattacgaatattataaaaggatttttagaaaattgaattaa 127  Q
    |||||||||||||||||||||||| ||| | ||||||||| ||||||||||| |||||||||||  | ||||||||  || |||| ||||||||||||||    
T  31061598 tgtttggattgagggtttaggaggggaatggaggggaggatttacttttctttttttaaattacagacattataaagtgactttttgaaaattgaattaa 31061499  T
Q  128 caacttgataaataatcatataata 152  Q
    |||| |||||||| |||||||||||    
T  31061498 caacatgataaatgatcatataata 31061474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 15085719 - 15085833
Alignment:
Q  43 gtttaggaggagaaggaaggggaggacttacttttcttttttaaa-ttacgaatattataaaaggatttttagaaaattgaattaacaacttgataaata 141  Q
    ||||| ||| |||||| || ||||  ||||||||| ||||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||||||     
T  15085719 gtttaagagaagaagggagaggagagcttactttttttttttaaaattacggacattataaaatgatttttagaaaattgaattaacaacttgataaatg 15085818  T
Q  142 atcatataatacttc 156  Q
    |||||||||||||||    
T  15085819 atcatataatacttc 15085833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 42296322 - 42296432
Alignment:
Q  42 ggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaata 141  Q
    |||||| |||| ||||| || | |||||||||||||||||||||||||||| ||||||||||| || |||||||||| |||||||||||| | ||||||     
T  42296322 ggtttatgaggggaagggagtgaaggacttacttttcttttttaaattacggatattataaaatgaattttagaaaaatgaattaacaacataataaatg 42296421  T
Q  142 atcatataata 152  Q
    |||||||||||    
T  42296422 atcatataata 42296432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 22356252 - 22356140
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaata-ttataaaaggatttttagaaa 117  Q
    ||||||||| |||||||||||||| ||||||||| ||||| ||||||||  | | ||||||||||||||||||| | | |||||||| ||||||||||||    
T  22356252 ttttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggacatttataaaatgatttttagaaa 22356153  T
Q  118 attgaattaacaa 130  Q
    |||||||||||||    
T  22356152 attgaattaacaa 22356140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 3094407 - 3094486
Alignment:
Q  77 tcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||||||  |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3094407 tcttttttaaattacgaacgttataaaatgattcttagaaaattgaattaacaacatgataaataatcatataatacttc 3094486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 1052771 - 1052884
Alignment:
Q  40 agggtttaggaggagaaggaaggggaggacttacttttctttt-ttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataa 138  Q
    ||||||||||||||||| | |||||| || ||||||||||||| ||||||||   |||||||||||  ||||||||||||||||||||||||| ||||||    
T  1052771 agggtttaggaggagaatggaggggaagatttacttttctttttttaaattatcgatattataaaataatttttagaaaattgaattaacaacatgataa 1052870  T
Q  139 ataatcatataata 152  Q
    || ||| |||||||    
T  1052871 atgatcgtataata 1052884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 33265817 - 33265717
Alignment:
Q  56 aggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatactt 155  Q
    |||||||||||||||  ||||| |||||||||||| ||| | | ||||| ||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  33265817 aggaaggggaggactcgcttttattttttaaattatgaacaatgtaaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatactt 33265718  T
Q  156 c 156  Q
    |    
T  33265717 c 33265717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 36052124 - 36052220
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||| ||||||||||||| |||||||||||  | ||||||||| |||||||||||||||||||||||||| | ||| || ||||||| |||||||    
T  36052124 aggggacgacttacttttctattttaaattacatacattataaaatgatttttagaaaattgaattaacaacatcatacatgatcatatgatacttc 36052220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 31795775 - 31795902
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| ||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||| | | ||| ||| | |||||  |||| | || ||||    
T  31795775 tgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaataac 31795874  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| |||||||  |||||||||||||||    
T  31795875 aacatgataaacgatcatataatacttc 31795902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 9313185 - 9313114
Alignment:
Q  69 cttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaat 140  Q
    |||||||||| ||||||||||||  | ||||||||| ||||||| |||||||||||||||||||||||||||    
T  9313185 cttacttttcctttttaaattacagacattataaaatgatttttcgaaaattgaattaacaacttgataaat 9313114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 2380998 - 2381120
Alignment:
Q  29 tgtttggattgagggtttaggaggagaa-ggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaa 127  Q
    ||||||||| |||||||||||||| ||| || ||||||||||| | |||||||||||||      |||||||||||| || ||||||||||||||||| |    
T  2380998 tgtttggatagagggtttaggaggggaaggggaggggaggactcatttttcttttttaa------aatattataaaatgaattttagaaaattgaattga 2381091  T
Q  128 caacttgataaataatcatataatacttc 156  Q
    |||| ||||  || || ||||||||||||    
T  2381092 caacatgattgatgatgatataatacttc 2381120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 21502236 - 21502144
Alignment:
Q  64 gaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||| || |||||||||||||| |||| |||||||||||  ||||| ||||||||| |||||||||  |||||||  ||||||||||||||    
T  21502236 gaggacatagttttcttttttaaactacggatattataaaataattttaagaaaattgcattaacaacaagataaatggtcatataatacttc 21502144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 35736172 - 35736240
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaat 88  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||  ||| |||||||||||||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaat 35736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 16713771 - 16713652
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| ||||||||||||   ||||| ||| |||  |||  |||||||||| ||| |||| |||||||||||  ||||||||||||||    
T  16713771 ttagggtgtgtttggatggagggtttaggaaaggaagggaggagagagcttgtttttctttttaaaactacggatattataaaataatttttagaaaatt 16713672  T
Q  121 gaattaacaacttgataaat 140  Q
    ||||||| ||| ||| ||||    
T  16713671 gaattaataacatgagaaat 16713652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 36347787 - 36347716
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| |||||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||||    
T  36347787 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacg 36347716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 1270515 - 1270451
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||||||||| |||||||||| |||| |||||||| || |||||| ||||||||||||||||    
T  1270515 gtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaa 1270451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 886927 - 886986
Alignment:
Q  32 ttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||| |||||||||||||||| ||||| | |||||| |||||||||||||||||||||||    
T  886927 ttgggttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattac 886986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 17334058 - 17333995
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttctttttt 84  Q
    ||||||| | |||| ||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  17334058 ttagggtgtttttgaattgagggtttaggaggggaaggaaggggaggactcacttttatttttt 17333995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 35325463 - 35325380
Alignment:
Q  73 cttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||| |||||||||||   | |||||||||  ||||||| ||||||||||||| ||| |||||||| |||||||||||||||    
T  35325463 cttttcctttttaaattaacgacattataaaataatttttaaaaaattgaattaataacatgataaatgatcatataatacttc 35325380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 42296551 - 42296476
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||||| ||||||||||||||| |||||||| ||||| ||| ||||  | |||||| ||||||||||||||||    
T  42296551 ttttagggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaa 42296476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 45098355 - 45098280
Alignment:
Q  81 ttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||  | ||||||||| | |||||  ||||||||||||||||| |||||||| |||||||||||||||    
T  45098355 ttttaaattacagacattataaaatggtttttgaaaaattgaattaacaacatgataaatgatcatataatacttc 45098280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 35736431 - 35736365
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatt 89  Q
    ||||| ||||||||| |||||||||||||| ||||| |||||||| || ||||||| ||||||||||    
T  35736431 agggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatt 35736365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 15224938 - 15224869
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||  ||||||||||||| ||||| |||||| |  |||||||||||||||||||||||    
T  15224938 agggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacg 15224869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 31061409 - 31061360
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  31061409 gtgagccctcccatcctttcccctcctaaaccttcaatccaaacacaccc 31061360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 34187748 - 34187695
Alignment:
Q  96 attataaaaggatttttagaaaattgaattaacaacttgataaataatcatata 149  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| || |||||    
T  34187748 attataaaatgatttttagaaaattgaattaacaacatgataaatgattatata 34187695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 39732976 - 39732903
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||| |||||||||||| |||||  |||| ||||||| |||| || ||||||||| |||||||||||||    
T  39732976 ttttagggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacg 39732903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 17379838 - 17379890
Alignment:
Q  15 gaaattttagggtttgtttggattgagggtttaggaggagaaggaaggggagg 67  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  17379838 gaaatcttagggtgtgtttggattgagggtttaggaggggaagggaggggagg 17379890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 17379891 - 17379847
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  17379891 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 17379847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 35736220 - 35736176
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  35736220 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 35736176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 887355 - 887285
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| ||| ||||| || ||||||||||| ||||| |||||||  ||||||||||||||||||||||||    
T  887355 ttagggtgtgtctggat-gaaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacg 887285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 31061359 - 31061430
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||| ||||||||||| ||| | | |||||| || |||||| ||||||||||||||||    
T  31061359 agggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaa 31061430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 33265615 - 33265678
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||||||||||||||||||||| ||||| ||| || |||| | |||| ||||||||||||||||    
T  33265615 tttggattgagggtttaggaggggaagggaggcgatgactcatttttattttttaaattacgaa 33265678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 36046439 - 36046377
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||||||||||||| |||| ||||| ||||||||  |||||||| ||||||||||||||    
T  36046439 tgtttggattgagggtttatgaggggaagggaggggagg-tttacttttgttttttaaattacg 36046377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 45257307 - 45257378
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| ||||||||||||| |||||||||| ||| | | ||||||||| |||||| |||| |||||||||||    
T  45257307 agggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaa 45257378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 3094591 - 3094529
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||||||||||||||||| |  |||| |||||| |||| |||||| |||||||||||||    
T  3094591 tgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattac 3094529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 36347742 - 36347784
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  36347742 ctcccttcccttcccctcctaaaccctcaatccaaacacaccc 36347784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 8554351 - 8554432
Alignment:
Q  75 tttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||||| | |||||||||  ||||||  ||||||||||||||| | |||||||| ||| || ||||||||    
T  8554351 tttctttttcaaattacggacattataaaataattttttaaaaattgaattaacatcatgataaatgatcgtacaatacttc 8554432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 14196876 - 14196823
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggattttta 113  Q
    |||||||| |||||||||||||||||||||||||| | ||||||| | ||||||    
T  14196876 aggggagggcttacttttcttttttaaattacgaacactataaaatgtttttta 14196823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 23748339 - 23748270
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||||||  | ||||||| |||||||| ||||    
T  23748339 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacg 23748270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 23748289 - 23748338
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  23748289 gtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 23748338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 35736381 - 35736430
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  35736381 gtgagccctcccctcccttcacctcctaaaccctccatccaaacacaccc 35736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 22356203 - 22356247
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||    
T  22356203 ccctcccctcccttcccctcctaaatcctcaatccaaacacaccc 22356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 31796012 - 31795968
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggg 63  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  31796012 ttttagggtttgtttggattgaaggtttaggaggggaagggaggg 31795968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 31928121 - 31928177
Alignment:
Q  100 taaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||| |||||||  ||||||||||||| ||| |||||||| |||||||||||||||    
T  31928121 taaaatgatttttttaaaattgaattaataacatgataaatgatcatataatacttc 31928177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 31928243 - 31928286
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaac 260  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||    
T  31928243 gtgagccctcccttcccttcccctcctaaaccctcgatccaaac 31928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 34187575 - 34187646
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| ||||||||||||| |||||||||  |||||||||||| |  | ||||||  |||||||||||||||    
T  34187575 agggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaa 34187646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 40022608 - 40022549
Alignment:
Q  32 ttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||| ||||||||| |||||||||| ||||||||  |||| |||| ||||||||||||    
T  40022608 ttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattac 40022549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 41841727 - 41841684
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||    
T  41841727 ccctcccatccctttccctcctaaatcctcaatccaaacacacc 41841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 8427109 - 8427051
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaa 87  Q
    ||||||||||||||||||||||||  |||| |||||||   ||||||||| ||||||||    
T  8427109 tgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 14187109 - 14187155
Alignment:
Q  58 gaaggggaggacttacttttcttttttaaattacgaatattataaaa 104  Q
    |||||||||| ||||||||||||||||||||||  || |||||||||    
T  14187109 gaaggggagggcttacttttcttttttaaattataaacattataaaa 14187155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 36046401 - 36046443
Alignment:
Q  223 cctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    |||||| ||||||||||||  ||||||||||||||||||||||    
T  36046401 cctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 17380085 - 17380016
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||  |||||| |  ||  ||||| |||||||||||||    
T  17380085 agggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacg 17380016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 17380051 - 17380084
Alignment:
Q  233 cttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||| |||||||||||||||||||||||    
T  17380051 cttcccctcctaaaccctcaatccaaacacaccc 17380084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 31928286 - 31928225
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||| |||||||||||||| ||||| | |||||| || ||||||  ||||||||||||    
T  31928286 gtttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattac 31928225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 42296497 - 42296546
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||| | ||||||||||||| || ||||||||||||||||||||    
T  42296497 gtgaaccctctcctcccttcccctcctaatccctcaatccaaacacaccc 42296546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 45257357 - 45257308
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| |||||| ||| ||||||||| |||| ||||||||||||||||||    
T  45257357 gtgagtcctcccttcctttcccctcctaaactctcaatccaaacacaccc 45257308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 41778818 - 41778774
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| |||||| |||| | |||||||||||||||||||||||    
T  41778818 ccctcccctccctttcccttctaaaccctcaatccaaacacaccc 41778774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 41841678 - 41841750
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| ||| |||||||||||||| |||||||||  |||| | ||||||  ||  ||||||||||||||||||    
T  41841678 ttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 34641234 - 34641103
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||| | ||||||||| ||  |||||||||||||    
T  34641234 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatga--tttagaaaattga 34641137  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||||| |||||||||||||||    
T  34641136 attaacaacatgataaatgatcatataatacttc 34641103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 55428617 - 55428492
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    |||||||||||||||||||||||| ||||| |||||| || ||||||||||| ||||||||||| | |||| || | |||||||||||||||||||||||    
T  55428617 tgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggacattacaagatgatttttagaaaattgaattaac 55428518  T
Q  129 aacttgataaataatcatataatact 154  Q
    ||| |||||||| |||||||||||||    
T  55428517 aacgtgataaatgatcatataatact 55428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 24253973 - 24253833
Alignment:
Q  16 aaattttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttaga 115  Q
    |||||||||||| ||||||||| |||||||||| ||| ||||| |||| |||| ||||||||||||||||||||||| | ||||||||| || |||||||    
T  24253973 aaattttagggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatgagttttaga 24253874  T
Q  116 aaattgaattaacaacttgataaataatcatataatacttc 156  Q
    || ||||||||||||| |||||||| || |||||| |||||    
T  24253873 aagttgaattaacaacatgataaatgattatataacacttc 24253833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 44412609 - 44412472
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaa 118  Q
    ||||| ||| |||||||||||| |||||  |||| ||||| ||||||||||| |||||| |||||||||||||||| | | ||||| ||||||| |||||    
T  44412609 ttttaaggtgtgtttggattgatggtttgtgaggggaagggaggggaggactcacttttattttttaaattacgaacaatgtaaaatgattttttgaaaa 44412510  T
Q  119 ttgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  44412509 ttgaattaacaacatgataaatcatcatataatacttc 44412472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 26136025 - 26135908
Alignment:
Q  39 gagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataa 138  Q
    |||||||||||||| ||||| || |||||  ||||||||||||||||||||||| | |||||||||  |||||| |||||||||||||||||  ||||||    
T  26136025 gagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttttgaaaattgaattaacaatatgataa 26135926  T
Q  139 ataatcatataatacttc 156  Q
    ||||| ||||||||||||    
T  26135925 ataattatataatacttc 26135908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 10943611 - 10943747
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaat 119  Q
    |||| ||| ||||||||| ||||||||| |||| ||| | ||| || || ||| |||||||||||||||||   ||||||||||| ||||||||||||||    
T  10943611 tttatggtatgtttggatggagggtttaagaggggaaaggaggagaagatttaattttcttttttaaattatagatattataaaatgatttttagaaaat 10943710  T
Q  120 tgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||| | ||||||||| ||||||||||||    
T  10943711 tgaattaacaacataataaataattatataatacttc 10943747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 8432261 - 8432392
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| |||||| || ||||||||| |||| ||||  |||||||||||||||||| |||||  ||||||  | ||||||||| |||||||| ||||||||    
T  8432261 agggtgtgtttgaatggagggtttacgaggggaagagaggggaggacttactttttttttt--aattacagacattataaaatgatttttacaaaattga 8432358  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||||||||  |||||||||||    
T  8432359 attaacaacatgataaataattttataatacttc 8432392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 40858772 - 40858676
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||  ||| ||||||||||||||||||| | ||||||||| ||| ||| |||||||||||||||||| |||||||| |||||||||||||||    
T  40858772 aggggagggtttagttttcttttttaaattacggacattataaaatgatcttttgaaaattgaattaacaacatgataaatgatcatataatacttc 40858676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 17474212 - 17474339
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||||||||||||||||||  ||| || || |    ||||||||||||||||||||||| | |||||||||  ||||||  ||||||||||||||    
T  17474212 tgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaattgaattaac 17474311  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||  ||||||||||||| ||||||||||    
T  17474312 aatatgataaataatcaaataatacttc 17474339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 48683806 - 48683727
Alignment:
Q  74 ttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaac-ttgataaataatcatataata 152  Q
    ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  48683806 ttttcttttttaaattacgaacattataaaatgatttttaggaaattgaattaacaacattgataaatgatcatataata 48683727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 220644 - 220572
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacg 220572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 42772229 - 42772143
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||| ||| || |||||||| | ||||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  42772229 ttactttgcttcttaaaattacggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatataatacttc 42772143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 16883974 - 16884104
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||  ||||||||||  || |||||||||||||| ||||| |||||||||||| |||| |||| |||||||  | ||||| ||||||||    
T  16883974 agggtgtgtttggaaagagggtttagtggg-gaaggaaggggagggcttacatttcttttttaatttacaaata-tataaaaaaaattttaaaaaattga 16884071  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    | ||||||| |||||||| |||||||||||||||    
T  16884072 a-taacaacatgataaatgatcatataatacttc 16884104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 21090129 - 21090204
Alignment:
Q  81 ttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||  ||||||||||| ||||||| |||||||||||||||||| ||||| || |||||||||||||||    
T  21090129 ttttaaattacagatattataaaacgattttttgaaaattgaattaacaacatgatatattatcatataatacttc 21090204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 36727413 - 36727287
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| ||||||||| || | |||||| ||| |  |||| ||||| | |||||||||||||| |||||||||  ||||| |||||||| | |||||    
T  36727413 tgtttggatggagggtttaagaagggaagga-gggaaaaacttccttttatcttttaaattacgaacattataaaataattttaagaaaattaacttaac 36727315  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| |||||||| |||||||||||||||    
T  36727314 aacatgataaattatcatataatacttc 36727287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 41414276 - 41414189
Alignment:
Q  70 ttacttttctttttt-aaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||| |||| | | | ||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  41414276 ttacttttctttttttaaatcagggacattataaaatgatttttagaaaattgagttaacaacatgataaatgatcatataatacttc 41414189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 18086026 - 18086114
Alignment:
Q  69 cttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgat-aaataatcatataatacttc 156  Q
    |||||||||||||||||||||||  | ||||||||| | |||||||||||||||||||||||| | || |||| |||||| ||||||||    
T  18086026 cttacttttcttttttaaattacagacattataaaatgttttttagaaaattgaattaacaacataataaaatgatcataaaatacttc 18086114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 28582756 - 28582684
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||| |||||||| ||||| ||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  28582756 tttagggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacg 28582684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 54985739 - 54985810
Alignment:
Q  69 cttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaat 140  Q
    |||| ||||| ||||||||||||| | ||||||||  |||||||||||||||||||||||||  ||||||||    
T  54985739 cttagttttcgtttttaaattacggacattataaattgatttttagaaaattgaattaacaatatgataaat 54985810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 42772050 - 42772112
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||||||| |||||| |||| ||||| ||||||||||| |||||| |||||||||||||    
T  42772050 tgtttggattgaaggtttaagaggggaagggaggggaggactcacttttattttttaaattac 42772112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 24560217 - 24560286
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||| ||||||||||||| ||||| ||||||||  ||  |||||||||||||||||||    
T  24560217 agggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacg 24560286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 42699669 - 42699745
Alignment:
Q  80 tttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||| | | |||||||||  | |||||||||||||||||| |||  |||||||| |||||||||||||||    
T  42699669 tttttaaattatggacattataaaataaattttagaaaattgaattatcaatatgataaatgatcatataatacttc 42699745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 17474444 - 17474377
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaata 96  Q
    ||||||||||||||||| |||||| ||||| |||||||   | |||||| ||||||||||||||||||    
T  17474444 tgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaata 17474377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 27197734 - 27197781
Alignment:
Q  108 tttttagaaaattgaattaacaacttgataaataatcatataatactt 155  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||||    
T  27197734 tttttagaaaattgaattaacaacatgatagatgatcatataatactt 27197781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 41414078 - 41414145
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||| ||||| ||||||||||||||||||  |||| |||||||| || |||||| ||||||||||||    
T  41414078 agggtatgtttagattgagggtttaggagggaaagggaggggagggctcacttttattttttaaatta 41414145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 44412361 - 44412432
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||| ||||||||||||||||| ||||  ||||||||||| | ||||  |||||||||||||||    
T  44412361 agggtgtgtttgaattgagggtttaggaggggaagagaggggaggactcattttttatttttaaattacgaa 44412432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 34641187 - 34641233
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  34641187 agccctcccctcccttcccctcctaaaccctccatccaaacacaccc 34641233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 21090309 - 21090248
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    |||||||||||| ||||||||||  ||||| ||| ||||||| |||||| ||||||||||||    
T  21090309 tgtttggattgatggtttaggagaggaagggaggagaggactcacttttattttttaaatta 21090248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 25655216 - 25655147
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| ||||||||||||||||| | |||||||||| ||||||||  |||  |||| |||||||||||||    
T  25655216 agggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacg 25655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 24560262 - 24560218
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  24560262 ccctcccctcccttcccctcctaaacccttaatccaaacacaccc 24560218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 34640996 - 34641081
Alignment:
Q  17 aattttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggattttt 112  Q
    ||||||||||| |||||||||||||||||||||          |||||||| || |||||| |||||||||||||||| | | |||||||||||||    
T  34640996 aattttagggtgtgtttggattgagggtttagg----------aggggagggctcacttttattttttaaattacgaacaatgtaaaaggattttt 34641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 46978594 - 46978538
Alignment:
Q  100 taaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||| |||||||| |||||| |||||||||| |||||||| || ||||||||||||    
T  46978594 taaaatgatttttataaaatttaattaacaacatgataaatgattatataatacttc 46978538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 5962015 - 5961945
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||| |||||| ||||||||||||||||| ||||| ||| || |||| |||||| ||||| |||||||    
T  5962015 tttagggtgtgtttgtattgagggtttaggagg-gaagggaggtgaagactcacttttgtttttaaaattac 5961945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 14897982 - 14898044
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||||||||||| |||||||||| ||||| || |||    ||||||||||||||||||||||    
T  14897982 tgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 24560463 - 24560393
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||||| ||||||||| |||||||||||||| ||| | | |||||   ||||||||| ||||||||||||    
T  24560463 ttagggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattac 24560393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 24560418 - 24560460
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||    
T  24560418 ctcccatccgttcccctcctaaaccctccatccaaacacaccc 24560460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 37102348 - 37102382
Alignment:
Q  232 ccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||| |||||||||||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacaccc 37102382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 45663197 - 45663277
Alignment:
Q  74 ttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||| |||||||||| ||||| | |||||||  |||||| |||||||||| ||||||| |||||||| ||| |||||||||||    
T  45663197 tttttttttttaaat-acgaacactataaaat-attttttgaaaattgaaataacaacatgataaatgatcttataatacttc 45663277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 55428581 - 55428619
Alignment:
Q  225 tcccatcccttcccctccaaaaccctcaatccaaacaca 263  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  55428581 tcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 5903549 - 5903606
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttctt 80  Q
    ||||| |||||||||||||| |||| |||| ||||| ||||||||  |||||||||||    
T  5903549 agggtgtgtttggattgaggatttaagaggggaaggcaggggagggtttacttttctt 5903606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 21773782 - 21773851
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||| ||||||||||| ||||| | || |||   |||||||||||| |||||||||    
T  21773782 agggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacg 21773851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 26135808 - 26135864
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    |||||||||||||||||||||| |||||     ||||||||| |||||| ||||||||||||    
T  26135808 tgtttggattgagggtttaggaagagaa-----gggaggactcacttttattttttaaatta 26135864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 30200319 - 30200266
Alignment:
Q  39 gagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||| ||||||| ||||| |||| |||  |||||||||||||||||||||||    
T  30200319 gagggtataggaggggaagggagggaagggtttacttttcttttttaaattacg 30200266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 37102385 - 37102348
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaagg 58  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  37102385 ttagggtgtgtttggattgagggtttaggaggggaagg 37102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 41110565 - 41110496
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| ||||||||||||||||||  |||| ||||| || ||| |  ||||||||| |||||||||||||    
T  41110565 agggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacg 41110496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 41414128 - 41414079
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||| |||||| |||||| |||||||||||| ||||| ||||    
T  41414128 gtgagccctcccctccctttccctcctaaaccctcaatctaaacataccc 41414079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 54574562 - 54574599
Alignment:
Q  229 atcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  54574562 atcccttcccttcctaaaccctcaatccaaacacaccc 54574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 1816095 - 1816051
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaa 104  Q
    |||||||||||||||||||| |||||||||| | | |||||||||    
T  1816095 aggggaggacttacttttctattttaaattaaggacattataaaa 1816051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 18654645 - 18654601
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||| ||| |||||| |||||||| ||||||||||||||    
T  18654645 ccctcccatctctttccctcctaaaccctccatccaaacacaccc 18654601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 18654802 - 18654842
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||| ||||||||||||| ||||||||||| |||||||||    
T  18654802 ctcccctcccttcccctcctaaaccctcaattcaaacacac 18654842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 24253758 - 24253722
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| |||||| |||||||||||||||||||||||    
T  24253758 tccctttccctcctaaaccctcaatccaaacacaccc 24253722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 28582708 - 28582752
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| ||| ||||| |||||||||||||    
T  28582708 ccctcccctcccttcccctcctaaatcctcagtccaaacacaccc 28582752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 41110318 - 41110390
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||| ||| ||||||||| |||| ||||||||| ||||| ||| || |  ||||||||| |||||||||||||    
T  41110318 tttatggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacg 41110390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 41110528 - 41110564
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||  |||||||||||||||||||||||    
T  41110528 tcccttcccctcacaaaccctcaatccaaacacaccc 41110564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 42772094 - 42772046
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    ||||| |||||| ||||||||||||  ||||| ||||||||||||||||    
T  42772094 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 42772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 43005977 - 43005917
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatt 89  Q
    |||||||||||||||||||  |||  |||||| | ||||| ||| ||||||||||||||||    
T  43005977 tgtttggattgagggtttataagggaaaggaaagagaggatttaattttcttttttaaatt 43005917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 44412410 - 44412362
Alignment:
Q  218 tgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| |||||| || |||||||||| ||||||||||| |||||||||||    
T  44412410 tgagtcctcccctctcttcccctcctaaaccctcaattcaaacacaccc 44412362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 44412555 - 44412603
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    ||||| |||||| ||||||||||||  ||||| ||||||||||||||||    
T  44412555 gtgagtcctcccctcccttcccctcacaaaccatcaatccaaacacacc 44412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 49815459 - 49815503
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaa 104  Q
    |||||||| ||||||||||||||||||||||| | || |||||||    
T  49815459 aggggagggcttacttttcttttttaaattacaagtactataaaa 49815503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 35513035 - 35512909
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| |||||||||||||| ||||| |||||||| ||||||||| |||||||||||| | | ||||||||| |||||||||||||||||||||||    
T  35513035 tgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaattatggacattataaaatgatttttagaaaattgaattaac 35512936  T
Q  129 aacttgataaataatcatataatactt 155  Q
    ||| |||||||| ||||||||||||||    
T  35512935 aacatgataaatgatcatataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 40709290 - 40709425
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| |||||||||| | |||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  40709290 ttagggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaatt 40709389  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
     ||||||| |  |||||||| |||||||||||||||    
T  40709390 aaattaacgatatgataaatgatcatataatacttc 40709425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 1085489 - 1085623
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttc-ttttttaaattacgaatattataaaaggatttttagaaaattg 121  Q
    ||||| ||||||||| |||||||||||||| | | | ||||||||||||||||||| |||||||||||||| | |||| |||| ||||||||||||||||    
T  1085489 agggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacggacattagaaaatgatttttagaaaattg 1085588  T
Q  122 aattaacaacttgataaataatcatataatacttc 156  Q
    || ||||| | |||||||| |||||||||||||||    
T  1085589 aactaacagcatgataaatgatcatataatacttc 1085623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 25268500 - 25268375
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaa 130  Q
    ||||||| |||||||||| ||| ||||  ||||||||  ||||||| ||||||||||||||| | ||||||||| ||||||||||||||| ||| |||||    
T  25268500 tttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacggaaattataaaatgatttttagaaaatttaatcaacaa 25268401  T
Q  131 cttgataaataatcatataatacttc 156  Q
    | |||||||| |||||||||||||||    
T  25268400 cgtgataaatgatcatataatacttc 25268375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 51303384 - 51303517
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| |||||||||||||||||||||||| || || |||||||| || |||||| ||||||| ||||| || | | ||||| |||||||  ||||||||    
T  51303384 agggtgtgtttggattgagggtttaggaggggaggggaggggagggctcacttttattttttatattaccaacaatgtaaaatgatttttttaaaattga 51303483  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||||| |||||||||||||||    
T  51303484 attaacaacatgataaatgatcatataatacttc 51303517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 35928059 - 35927924
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaat 119  Q
    |||||||| ||||||||||||||| |||| ||| |||||   |||| || ||||||||||||||||||||||  || ||||||||  ||||| |||||||    
T  35928059 tttagggtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattacagattttataaaataatttt-agaaaat 35927961  T
Q  120 tgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||| |||||||| |||||||||||||||    
T  35927960 tgaattaacaacatgataaatgatcatataatacttc 35927924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 47071256 - 47071166
Alignment:
Q  62 gggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataata 152  Q
    |||| |||| ||||||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||| |||||||| |||||| ||||    
T  47071256 gggaagactaacttttcttttttaaattacggacattataaaatgatttttagaaaatttaattaacaacatgataaatgatcataaaata 47071166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 2506777 - 2506650
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| ||| |||||| ||  ||||| ||| || |||||| ||||||||||||||||||  |||||||||||  ||||||| ||||| ||||||||    
T  2506777 tgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaaatcgaattaac 2506678  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||  | |||||| |||||||||||||||    
T  2506677 aatataataaatgatcatataatacttc 2506650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 13386966 - 13387049
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatac 153  Q
    ||||||||||||||| ||||| | | || |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  13386966 ttacttttctttttttaattatggacatcataaaacgatttttagaaaattgaattaacaacatgataaatgatcatataatac 13387049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 30010330 - 30010401
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||||||    
T  30010330 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacg 30010401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 20607461 - 20607330
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttact-tttcttttttaaattacgaatattataaaaggatttttagaaaattg 121  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||||||  ||||| ||| |||||| ||||| | | ||||||||| ||||||| |||||||     
T  20607461 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttactatttttttttttaattatggacattataaaatgattttttgaaaatta 20607362  T
Q  122 aattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||   ||||| || |||||||||||||||    
T  20607361 aattaaca---tgatatattatcatataatacttc 20607330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 40094931 - 40095002
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||  ||||||||| |||||||||||||    
T  40094931 ttagggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacg 40095002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 12234010 - 12234079
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||| |||| ||| |||| |||||||||||||||||||    
T  12234010 agggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacg 12234079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 33643460 - 33643379
Alignment:
Q  75 tttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||||||||||||| ||  |||| ||| |||||||||||||||    
T  33643460 tttcttttttaaattatgaacattttaaaatgatttttagaaaattgaattaataatatgatgaatgatcatataatacttc 33643379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 1344741 - 1344666
Alignment:
Q  74 ttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatata 149  Q
    ||||||||||||||||||| | ||| ||||| ||||||||||||||||||  |||||| |||||||||| ||||||    
T  1344741 ttttcttttttaaattacggacattgtaaaatgatttttagaaaattgaaccaacaacatgataaataaacatata 1344666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 1085737 - 1085663
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||||||| ||||||||| |||||||||||||| ||||| ||| || |||| |||||| ||||||||||||||||    
T  1085737 tttagggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaa 1085663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 525139 - 525232
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| ||||||||||||||||||||||| | || ||||||  ||||||||||| ||||||||||||  |||||||| || ||||||||||||    
T  525139 aggggagga-ttacttttcttttttaaattacggacat-ataaaataatttttagaaa-ttgaattaacaatatgataaatgattatataatacttc 525232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 35349709 - 35349637
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||| |||||||||| |||||||| |||| ||||| ||||||||  ||||||||| |||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacg 35349637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 7444484 - 7444547
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||| ||||||||||||| ||||||||||| | ||||||  |||||||||||||||||||||||    
T  7444484 tgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacg 7444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 41498404 - 41498471
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||| |||||||||||||||||||||||| ||||  ||||||||  ||||||||| |||||||||||    
T  41498404 agggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 2859169 - 2859107
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||||| ||||||||||| ||||| ||||||||  |||||||| ||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacg 2859107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 32951567 - 32951493
Alignment:
Q  18 attttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||| ||||||||||||| |||||||||  ||||| |||||||   ||||||||| |||||||||||||    
T  32951567 attttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacg 32951493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 33643266 - 33643339
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||| ||||| |||||| ||||||||||| ||||| | |||| |||| |||||| ||||||||||||||||    
T  33643266 ttagggtgtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaa 33643339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 33673453 - 33673360
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||||||| ||||||||||||| ||||   | | ||| ||||| ||||||||||||||||| |||||||||||||  ||||| | ||||||||    
T  33673453 tgtttggatggagggtttaggagaagaaatgatgagagaacttatttttcttttttaaattatgaatattataaaataattttaaaaaaattga 33673360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 41498652 - 41498579
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggag-aaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||| ||||||||| ||| |||||||||| | |||| ||||||||| ||||||||| |||||||||||||    
T  41498652 tttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacg 41498579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 51303434 - 51303385
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  51303434 gtgagccctcccctcccctcccctcctaaaccctcaatccaaacacaccc 51303385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 12234257 - 12234185
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||| ||| ||||||||| |||||||||||||| ||||| ||||||||  ||| ||||| |||||||||||||    
T  12234257 tttatggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacg 12234185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 26324059 - 26324015
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  26324059 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 26324015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 38509891 - 38509963
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||  | ||||||| |||||||||||||    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacg 38509963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 30010376 - 30010333
Alignment:
Q  223 cctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  30010376 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 30010333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 38510132 - 38510069
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||| ||||||||||||| ||||| ||||||||  ||| |||||||||||||| ||||    
T  38510132 tgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacg 38510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 12234057 - 12234011
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| || ||||||||||||| |||||||||||||||||||||||    
T  12234057 agccctaccctcccttcccctcctaaaccctcaatccaaacacaccc 12234011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 2858931 - 2859000
Alignment:
Q  22 tagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||| ||||||||| ||||||||||||||  |||| ||||||||  ||||||||| ||| ||||||||    
T  2858931 tagggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattac 2859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 35927864 - 35927815
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||| ||| ||||||||| ||| |||||||||||||||||||    
T  35927864 gtgagccctcccctccattcccctcctaaaacctcaatccaaacacaccc 35927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 20607416 - 20607460
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  20607416 ccctcccctcccttcccctcctaaaccctccatccaaacacaccc 20607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 26324014 - 26324058
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggagg 67  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||    
T  26324014 agggtgtgtttggattgagggtttaggaggggaagggaggggagg 26324058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 40095178 - 40095110
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| |||||||||||||||||||| |||| |||| | || |||  ||||||||| ||||||||||||    
T  40095178 agggtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattac 40095110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 41498449 - 41498405
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| || |||||||||| |||||||||||||||||||||||    
T  41498449 ccctcccctcacttcccctcctaaaccctcaatccaaacacaccc 41498405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 52707844 - 52707756
Alignment:
Q  68 acttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||||||||||||||| || ||||| |||  ||||||  |||| |  | ||||||| |||||||| || ||||||||||||    
T  52707844 acttacttttcttttttaaattaccaacattatcaaataatttttttaaaaatttaataacaacatgataaatgatgatataatacttc 52707756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 12234209 - 12234252
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||    
T  12234209 ccctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 35512994 - 35513037
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaacaca 263  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||    
T  35512994 agccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 35927814 - 35927881
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||| |||||||||||||| ||||||||| ||| | |||||||| || || ||| ||||||||||||    
T  35927814 agggtgtgtttggattgaggttttaggaggggaatggaggggagggctcacatttattttttaaatta 35927881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 26941042 - 26941076
Alignment:
Q  232 ccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||| |||||||||||||||||||||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacaccc 26941076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 38510093 - 38510135
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||    
T  38510093 ccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 10391880 - 10391941
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||||| ||||||||| |||   ||||||||  ||||||||| |||||||||||||    
T  10391880 tttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacg 10391941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 26941079 - 26941042
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaagg 58  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  26941079 ttagggtgtgtttggattgagggtttaggaggggaagg 26941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 38509944 - 38509895
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||  ||||||||||||| |||||||| ||||||||||||||    
T  38509944 gtgaaccctcctctcccttcccctcctaaaccctctatccaaacacaccc 38509895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 525307 - 525343
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  525307 tcccttcccgtcctaaaccctcaatccaaacacaccc 525343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 1085697 - 1085733
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  1085697 tcccttcccctcctaaaccctctatccaaacacaccc 1085733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 2858977 - 2858933
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| |||||| |||||| |||||||| ||||||||||||||    
T  2858977 ccctcccctccctttccctcctaaaccctccatccaaacacaccc 2858933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 13387163 - 13387103
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||||||||||||||||||||  |||  || |||||||| | |||| |||||||||||||    
T  13387163 tttggattgagggtttaggagggaaagagagtggaggactcatttttattttttaaattac 13387103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 20576176 - 20576136
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||| ||||||||||||| |||||||| ||||||||||||    
T  20576176 ctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 20607260 - 20607224
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  20607260 tcccttcccctcctaaaccctcaattcaaacacaccc 20607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 30010531 - 30010575
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||| | |||||||| ||||||||||||||    
T  30010531 ccctcccctcccttccccttctaaaccctccatccaaacacaccc 30010575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 35349661 - 35349705
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||  ||||||| |||||||||||||||    
T  35349661 ccctcccctcccttcccctcataaacccttaatccaaacacaccc 35349705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 40094978 - 40094934
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  40094978 ccctccccttccttcccctcctaaaccctccatccaaacacaccc 40094934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 40709529 - 40709446
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggattttta 113  Q
    |||||||||||||| ||||||||| ||| | ||||||||  | |||||| |||||||||||| ||| | | ||||||| ||||||    
T  40709529 tgtttggattgaggatttaggaggggaacggaggggagg-gtcacttttattttttaaattatgaacaatgtaaaaggtttttta 40709446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 49832555 - 49832615
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||| | ||||||||||| ||||  || ||||  |||||||||||||||||||||||    
T  49832555 tttggattcaaggtttaggaggggaagtgagaggagagcttacttttcttttttaaattac 49832615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 79; Significance: 6e-37; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 155
Target Start/End: Original strand, 1403 - 1529
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    |||||||||||||||||||||| ||||| | | | |||||||||||||||||||||||| | || | |||||| || |||||||||||||||||||||||    
T  1403 tgtttggattgagggtttaggaagagaaaggatgagaggacttacttttcttttttaaactgcggacattatagaatgatttttagaaaattgaattaac 1502  T
Q  129 aacttgataaataatcatataatactt 155  Q
    |||||||||||| ||||||||||||||    
T  1503 aacttgataaatgatcatataatactt 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 1178 - 1241
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||||||||||||||||| ||||  |||||||   |||||||||||||||||||||||    
T  1178 tgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacg 1241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 1642 - 1571
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||| ||||||||||||||||  ||| | |||||||| || |||||| ||||||||||||||||    
T  1642 agggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaa 1571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 1592 - 1641
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||||||||||    
T  1592 gtgagccctcccctccattcctctcctaaaccctcaattcaaacacaccc 1641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 1215 - 1175
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  1215 ctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 54576333 - 54576460
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||||||| |||||| | ||||||||| ||||| |||||||||||||||||    
T  54576333 tgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatgatttatagaaaattgaattaac 54576432  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| |||||||| || ||||||||||||    
T  54576433 aacgtgataaatgattatataatacttc 54576460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 34995295 - 34995162
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||| |||||||||||||||| | ||||  |||| | |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  34995295 ttagggtgtgtttagattgagggtttaggaagggaagtgagggtaagacttacttttcttttttaaattacggatattatcaaatgatttttagaaaatt 34995196  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||  ||| |||||||||||| |||||||||||    
T  34995195 gaatta--aacatgataaataatcttataatacttc 34995162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 4437431 - 4437558
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| |||||||||||| |  |||| |||||| |||||| ||||||||||||||||| | ||||||||||| |||||||| ||||||||||||||    
T  4437431 tgtttggatggagggtttaggatggaaagggaggggatgacttatttttcttttttaaattatggatattataaaatgatttttaaaaaattgaattaac 4437530  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| |||||| | |||||||||||||||    
T  4437531 aacatgataattgatcatataatacttc 4437558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 22186927 - 22186830
Alignment:
Q  59 aaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  22186927 aaggggaggactcacttttcttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgataaatgattatataatacttc 22186830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 55080784 - 55080690
Alignment:
Q  62 gggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||| |||||||| |||||| ||||||||    
T  55080784 gggaggacttacttttcttttttaaattacgaacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttc 55080690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 43961617 - 43961521
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||| |||| ||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  43961617 aggggagggcttatttttcttttttaaattatgaacattataaaatgatttttagaaaattgaattatcaacatgataaatgatcatataatacttc 43961521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 5825140 - 5825013
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||| |||||||||||||  ||||   || ||||| ||||||||||||||| ||||||  | ||||||||| |||||||||||||||||    
T  5825140 agggtgtgtttggatggagggtttaggagaggaagtggggagaggatttacttttcttttttgaattacagacattataaaatgatttttagaaaattga 5825041  T
Q  123 attaacaacttgataaataatcatataa 150  Q
    ||||||||| |||||||| |||||||||    
T  5825040 attaacaacatgataaatgatcatataa 5825013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 37761710 - 37761575
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    ||||||| ||||||||| |||| ||||  ||| ||||| |||||||| ||| |||||||||||||||||| | | ||||| ||| |||||||||||||||    
T  37761710 ttagggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggacattatgaaatgatttttagaaaatt 37761611  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||| |||||||| || |||||| |||||    
T  37761610 gaattaacaacatgataaatgattatataacacttc 37761575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 29993777 - 29993904
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    |||||||||| ||||||||||||| ||||  || ||||||||   ||||||||||||||||||| | | ||||||| |||||||||||||||||||||||    
T  29993777 tgtttggattaagggtttaggaggggaagtgagtggaggactcgtttttcttttttaaattacggacactataaaatgatttttagaaaattgaattaac 29993876  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| ||||  || || ||||||||||||    
T  29993877 aacatgattgatgatgatataatacttc 29993904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 7977527 - 7977629
Alignment:
Q  55 aaggaaggggaggacttacttttctttt-ttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatac 153  Q
    |||| |||||||| |||||||||||||| |||||||||||| |||||||||  || ||| |||||||||||||||||| |||||||| ||||||||||||    
T  7977527 aagggaggggagggcttacttttctttttttaaattacgaacattataaaataatattttgaaaattgaattaacaacatgataaatgatcatataatac 7977626  T
Q  154 ttc 156  Q
    |||    
T  7977627 ttc 7977629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 54001122 - 54001236
Alignment:
Q  39 gagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataa 138  Q
    |||||||||||||   ||||||| ||||  ||||||||| |||||||||||||| | |||||||||  ||||||| |||||||||||||||   ||||||    
T  54001122 gagggtttaggagagaaaggaagtggagagcttacttttgttttttaaattacggacattataaaataatttttaaaaaattgaattaaca---tgataa 54001218  T
Q  139 ataatcatataatacttc 156  Q
    || |||||||||||||||    
T  54001219 atgatcatataatacttc 54001236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 47846102 - 47846188
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||||||||  | | |||||||||  ||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  47846102 ttacttttcttttttaaattctggacattataaaataatttttacaaaattgaattaagaacatgataaataatcatataatacttc 47846188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 21694906 - 21695022
Alignment:
Q  39 gagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataa 138  Q
    |||||||||||||| ||||| | |||||| |||||||||||||||||||||||| | | ||||||| | ||||||  |||||||| ||||||  |||| |    
T  21694906 gagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgat-a 21695004  T
Q  139 ataatcatataatacttc 156  Q
    || |||||||||||||||    
T  21695005 atgatcatataatacttc 21695022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 17182733 - 17182658
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||||| ||||||||||||||||||| |||| ||| | | |||||||||||||||| ||||||||||||||||    
T  17182733 ttttagggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaa 17182658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 14539514 - 14539383
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttctttttt----aaattacgaatattataaaaggatttttagaaaattgaat 124  Q
    ||||||||||||||||||| |||| ||||  |  |||||| |||||||| ||||||    |||||||||| ||||||||| | || |||||||||| |||    
T  14539514 tgtttggattgagggtttaagaggggaagagacaggaggatttactttttttttttttataaattacgaacattataaaatgtttgttagaaaattaaat 14539415  T
Q  125 taacaacttgataaataatcatataatacttc 156  Q
    ||| ||| | |||||| |||||||||||||||    
T  14539414 taagaacataataaatgatcatataatacttc 14539383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 45741885 - 45741959
Alignment:
Q  18 attttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||| |||||||||||||||||||||||| ||| ||| | ||||| |||||||| ||||||||||||||    
T  45741885 attttagggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacg 45741959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 44145771 - 44145844
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||| |||||||||| | ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||    
T  44145771 ttagggtgtgtttggattcaaggtttaggaggggaagggaggggaggactcacttttattttttaaattacgaa 44145844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 46007939 - 46007879
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatt 89  Q
    |||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  46007939 tgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 54935067 - 54935139
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaa-ggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||  |||||||||||||||||||||||||    
T  54935067 agggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaa 54935139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 27775581 - 27775659
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaa 104  Q
    |||||||||||||||||||||||||||||||| |||| |||||     |||||||||||||| ||||||||| ||| |||||||    
T  27775581 ttagggtttgtttggattgagggtttaggaggggaagaaaggg-----cttacttttcttttctaaattacggataatataaaa 27775659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 51329992 - 51329906
Alignment:
Q  69 cttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||||||||| | |||||||||||  |||| |||||||||||||||||||  |||||||| || ||||||||||||    
T  51329992 cttactttt-ttttttaaattagggatattataaaataatttatagaaaattgaattaacaaaatgataaatgattatataatacttc 51329906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 11089713 - 11089627
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||| |||||||||||||||||| |  ||||||||   |||||||||||||||||||||||| | |||||| |||||||| ||||||    
T  11089713 ttacatttcttttttaaattacggactttataaaatattttttagaaaattgaattaacaacatcataaatgatcatatattacttc 11089627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 31348565 - 31348500
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaat 88  Q
    ||||| ||||||||||||| |||||||||| ||||| ||||||||  |||||||||||||||||||    
T  31348565 agggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 49735468 - 49735537
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||  | ||||||| |||||||||||||    
T  49735468 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacg 49735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 17182520 - 17182618
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttag--aaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||| || |||||||||||||||||||||   |  |||||||| ||||||| |  ||||||||||||||||  |||||||| |||||||||||||||    
T  17182520 aggggaagatttacttttcttttttaaattattgacgttataaaatgattttttgcaaaaattgaattaacaatatgataaatgatcatataatacttc 17182618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 54935315 - 54935244
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| ||||||||| |||||||||||||| ||||| ||||||||  ||| ||||| |||||||||||||    
T  54935315 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacg 54935244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 56135749 - 56135820
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||  | | |||| ||||||||||||||||    
T  56135749 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaa 56135820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 2248039 - 2247977
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||||||||||||||||||||||||  | |||||   ||||||||||||||||||||||    
T  2248039 tgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattac 2247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 47433955 - 47433885
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||||| ||||||| |||| ||||||||||| ||||| || |||||  ||||||||||||||||||||||    
T  47433955 ttagggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattac 47433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 47846303 - 47846233
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    |||| ||| ||||||||||||||||||| |||||||||| | ||||||  |||||||| ||||||||||||    
T  47846303 tttaaggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 16400809 - 16400862
Alignment:
Q  32 ttggattgagggtttaggaggagaaggaaggggaggacttacttttctttttta 85  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| |||||||    
T  16400809 ttggattgagggtttaggaggagaagggaggggaggattcacttttatttttta 16400862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 35543346 - 35543411
Alignment:
Q  62 gggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaa 127  Q
    ||||| ||||| ||||||||||||||||| ||| |||||||||  ||||||| |||||||||||||    
T  35543346 gggagaacttatttttcttttttaaattaggaacattataaaataatttttaaaaaattgaattaa 35543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 37711371 - 37711298
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||| ||||||||| |||||||||||||| ||||| ||||||||  |||  |||| |||||||||||||    
T  37711371 ttttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacg 37711298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 49735518 - 49735469
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  49735518 gtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 37711183 - 37711139
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  37711183 ccctcccttcccttcccctcctaaaccctcaatccaaacacaccc 37711139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 44145938 - 44145842
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||| ||||| || ||||||||| |||   | ||||||||| |||||||| ||||||||||||||| | | |||||| ||||| |||||||||    
T  44145938 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcattataaatgatcatgtaatacttc 44145842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 49735691 - 49735735
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  49735691 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 51075271 - 51075215
Alignment:
Q  93 aatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatata 149  Q
    ||||||||||||  ||||||| ||||||||||||||||| |||||||| ||||||||    
T  51075271 aatattataaaataatttttaaaaaattgaattaacaacatgataaatgatcatata 51075215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 54320633 - 54320677
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  54320633 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 54320677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 56135794 - 56135750
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  56135794 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 56135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 6938283 - 6938350
Alignment:
Q  25 ggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||||||||| | ||||||||| ||||| ||| ||||| ||| ||||| |||||||||||||    
T  6938283 ggtttgtttggattgatgatttaggaggggaagggaggagaggatttatttttcctttttaaattacg 6938350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 21695132 - 21695065
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||| ||||||||||| ||||||| |||| |||||||| |||||  |||||||||| ||||||||||    
T  21695132 agggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaatta 21695065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 26166934 - 26167005
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||| |||||||||||||||||||||||| ||| | |||||||   ||  ||||||||||||||||||    
T  26166934 tttagggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattac 26167005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 35565565 - 35565616
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttt 81  Q
    ||||||||||||||||||| ||| ||||| |||||||| |||||||||||||    
T  35565565 gtttggattgagggtttagcaggggaagggaggggagggcttacttttcttt 35565616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 54320680 - 54320609
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||||||  ||  ||||  |||||||||||||    
T  54320680 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacg 54320609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 6938491 - 6938401
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggattttta 113  Q
    ||||| ||||||||| || |||||| |||| ||| | ||||||||  | ||||||| ||||||||||||| ||||||||||| | ||||||    
T  6938491 agggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgtttttta 6938401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 46007900 - 46007942
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  46007900 ccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 49735738 - 49735692
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggagg 67  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  49735738 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagg 49735692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 1968603 - 1968534
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||| |||| ||   ||| ||||| |||||||||||||    
T  1968603 agggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacg 1968534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 24565346 - 24565479
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||| || ||||||||| | ||||   |||||||  ||||||||| ||||||||||||| ||||||  ||| | |||||| ||| || |    
T  24565346 agggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacggatattacgaaatgctttttaaaaagttaa 24565445  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
     |||  ||| ||||||| || |||||||||||||    
T  24565446 cttattaacgtgataaacaaacatataatacttc 24565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 1968566 - 1968602
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1968566 tcccttcccctcctaaaccctcaatccaaacacaccc 1968602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 31348520 - 31348564
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||    
T  31348520 ccctcccctcccttcccctcctaaactctcaatccaaacacaccc 31348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 37711322 - 37711366
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  37711322 ccctcccctcccttcccctcctaaaccctccatccaaacacaccc 37711366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 54935104 - 54935068
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||||||||||||||||||    
T  54935104 tcccttcccctcctaaaccctcaatccaaacacaccc 54935068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 54935268 - 54935312
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  54935268 ccctcccctcccttcccctcctaaaccctccatccaaacacaccc 54935312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 55510356 - 55510281
Alignment:
Q  80 tttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||| | |||||||  ||||| | ||||||||| ||||||| |||| ||| |||||||||||||||    
T  55510356 tttttaaattacgaacactataaaat-attttaaaaaaattgaaataacaacatgatgaatgatcatataatacttc 55510281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 7977741 - 7977670
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| ||||||||||||||||||| |||| ||| | ||||||||  | | |||| ||||||||||||||||    
T  7977741 agggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacgaa 7977670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 9030387 - 9030328
Alignment:
Q  96 attataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatactt 155  Q
    ||||||||| ||||||||||||||| |||||| ||  |||||||| || |||||||||||    
T  9030387 attataaaatgatttttagaaaatttaattaataaaatgataaatgattatataatactt 9030328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 45132741 - 45132670
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||| |||||| |||||| |||||||||| ||||  ||| || |  |||||||||||||||||||||||    
T  45132741 ttagggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacg 45132670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 47846255 - 47846298
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||    
T  47846255 ccctcccatcccttctcctcttaaaccctcaatccaaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 26166980 - 26166938
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||    
T  26166980 ctcccctccattcccctcctaaaccctcaatccaaacacaccc 26166938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 35248703 - 35248737
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaag 57  Q
    ||||||| |||||||||||||||||||||||||||    
T  35248703 agggtttctttggattgagggtttaggaggagaag 35248737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 36151822 - 36151729
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggattttta 113  Q
    ||||||||| ||||| ||| |||| ||||||||| ||||||| || || | ||||||||| ||||||||||| ||| | || |||| ||||||||    
T  36151822 ttttagggtgtgtttagatggaggatttaggagg-gaaggaaaggtagaatttacttttcatttttaaattatgaacactagaaaatgattttta 36151729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 47846510 - 47846440
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    |||| ||| ||||||||||||||||||| |||||||||| |  ||| |  |||||||| ||||||||||||    
T  47846510 tttaaggtgtgtttggattgagggtttaagaggagaagggaaaggaaggtttacttttattttttaaatta 47846440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 54320429 - 54320502
Alignment:
Q  17 aattttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| ||||| ||||||||||||||||||||||||  |||| | ||||||  ||  ||||||||||||||||||    
T  54320429 aatttaagggtgtgtttggattgagggtttaggagggaaaggga-gggagggtttgattttcttttttaaattac 54320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 152
Target Start/End: Complemental strand, 8347427 - 8347315
Alignment:
Q  39 gagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataa 138  Q
    |||||||||  || |||||| ||||||| |||||  |||||||||||||||||  ||| |||||||  ||||||| ||  |||||  |||| | ||||||    
T  8347427 gagggtttacaagaagaagggaggggagaacttatatttcttttttaaattacatatactataaaa-tatttttaaaacgttgaaacaacagcatgataa 8347329  T
Q  139 ataatcatataata 152  Q
    || |||||||||||    
T  8347328 atgatcatataata 8347315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 11842344 - 11842377
Alignment:
Q  58 gaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||||||||||||||||||||| |||||||    
T  11842344 gaaggggaggacttacttttctttttcaaattac 11842377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 24565572 - 24565519
Alignment:
Q  39 gagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||||||| ||||| |||| || | |||| ||||||||||||||||||    
T  24565572 gagggtttaggaggggaagggagggaagaatttacatttcttttttaaattacg 24565519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 41174547 - 41174588
Alignment:
Q  225 tcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||||||||| |||||||| ||||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacaccc 41174588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 44145823 - 44145774
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| |||||| ||||||||||||| ||||| | |||||||||||||||    
T  44145823 gtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccc 44145774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 54576374 - 54576329
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaacacacc 265  Q
    ||||||||| ||||||||||| | |||||||| |||||||||||||    
T  54576374 agccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 56135904 - 56135860
Alignment:
Q  109 ttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||||||||||||   |||||||| |||||||||||||||    
T  56135904 ttttagaaaattgaattaaca---tgataaatgatcatataatacttc 56135860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 5730875 - 5730831
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||| ||| |||||| |||||||| ||||||||||||||    
T  5730875 ccctcccatctctttccctcctaaaccctccatccaaacacaccc 5730831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 5731032 - 5731072
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||| ||||||||||||| ||||||||||| |||||||||    
T  5731032 ctcccctcccttcccctcctaaaccctcaattcaaacacac 5731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 5824934 - 5824902
Alignment:
Q  234 ttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| |||||||||||||||||||||||||||    
T  5824934 ttcccttccaaaaccctcaatccaaacacaccc 5824902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 7977696 - 7977740
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||| ||||||||  |||||||||||||||||||||||    
T  7977696 ccctcccctcctttcccctcataaaccctcaatccaaacacaccc 7977740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 17938352 - 17938284
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||| |||||||||||||  ||||||||| ||||| ||  |||   ||||||||||||||||||||||    
T  17938352 agggtatgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattac 17938284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 35565605 - 35565565
Alignment:
Q  220 agccctcccatcccttcccctccaaaaccctcaatccaaac 260  Q
    ||||||||| ||||||||||| | |||||||||||||||||    
T  35565605 agccctcccctcccttcccctgctaaaccctcaatccaaac 35565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 36151621 - 36151577
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||| |||| |||||||||||||||||||||| |||| ||||||    
T  36151621 ccctctcatctcttcccctccaaaaccctcaattcaaatacaccc 36151577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 37711138 - 37711182
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggagg 67  Q
    ||||| |||||||||||||||||||||||| ||||| | ||||||    
T  37711138 agggtgtgtttggattgagggtttaggaggggaagggaagggagg 37711182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 41174353 - 41174385
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggagg 52  Q
    |||||||| ||||||||||||||||||||||||    
T  41174353 tttagggtgtgtttggattgagggtttaggagg 41174385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 45741923 - 45741891
Alignment:
Q  234 ttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||| |||||||||||||||||||||||    
T  45741923 ttcccctcctaaaccctcaatccaaacacaccc 45741891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 45911325 - 45911361
Alignment:
Q  68 acttacttttcttttttaaattacgaatattataaaa 104  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  45911325 acttacttttcttttttaaattacggatactataaaa 45911361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 53260755 - 53260719
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  53260755 tcccttcccctcctaaaccctccatccaaacacaccc 53260719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 54320472 - 54320436
Alignment:
Q  230 tcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| |||||| |||||||||||||||||||||||    
T  54320472 tccctttccctcctaaaccctcaatccaaacacaccc 54320436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 17782 - 17651
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| ||||||||| |||||||||||||  ||||| ||||| |   |||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  17782 agggtgtgtttggatggagggtttaggagtggaagggaggggggt--ttacttttcttttttaaattacaaatattataaaatgattttttgaaaattga 17685  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    |||| |||| ||||||||||||||||||||||||    
T  17684 attagcaacatgataaataatcatataatacttc 17651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 10293484 - 10293359
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaa 130  Q
    |||||||  ||||||||||||||||||| |||||||  ||||||||||||||| |||||||  ||||||||||| ||||||||||||| |||||| ||||    
T  10293484 tttggatgaagggtttaggaggagaagggaggggagagcttacttttctttttcaaattacagatattataaaatgatttttagaaaactgaattgacaa 10293385  T
Q  131 cttgataaataatcatataatacttc 156  Q
    | | ||||||||||||||||||||||    
T  10293384 catcataaataatcatataatacttc 10293359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 26318543 - 26318416
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| ||| ||||||||||  |||| |||||| || ||||||||||||||||||||| | || |||||||| || ||||||||||||||||||||    
T  26318543 tgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggattttataaaatgacttttagaaaattgaattaac 26318444  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| |||||| | |||||||||||||||    
T  26318443 aacatgataattgatcatataatacttc 26318416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 34176586 - 34176700
Alignment:
Q  38 tgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgata 137  Q
    ||||||||||||||| || || |||||| |||||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||  | |||    
T  34176586 tgagggtttaggaggggatgggaggggaagacttacttttcttttttaaattacgaaaattataaattgatttttaaaaaattgaattaacaatataata 34176685  T
Q  138 aataatcatataata 152  Q
    ||| |||||||||||    
T  34176686 aatgatcatataata 34176700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 9051532 - 9051659
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaatt 120  Q
    |||||||  ||||||||||||| |||||||||  || | ||| || |  |||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  9051532 ttagggtgcgtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacggatattataaaatgatttttagaaaatt 9051631  T
Q  121 gaattaacaacttgataaataatcatat 148  Q
    ||||||||||| |||||||| |||||||    
T  9051632 gaattaacaacatgataaatgatcatat 9051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 4097235 - 4097368
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattga 122  Q
    ||||| |||||||||||||||||||||||| ||||||||  |||   |||||||| |||||| ||| ||| | |||||||||   |||||||||||||||    
T  4097235 agggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggacattataaaatattttttagaaaattga 4097334  T
Q  123 attaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||||||| |||||| ||||||||    
T  4097335 attaacaacatgataaatgatcatacaatacttc 4097368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 31799118 - 31799032
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||||||||||| |||||||||||  ||||||  ||||||||||||||||| |||||||| |||||||||||||||    
T  31799118 ttacttttcttttttaaattacggatattataaaataattttttaaaaattgaattaacaacatgataaatgatcatataatacttc 31799032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 3841330 - 3841196
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaagga--tttttagaaaatt 120  Q
    ||||| |||||||||  ||||||||||||| |||| ||  ||| |||||||||||||||||||||||||| | ||||||||| ||  |||||| ||||||    
T  3841330 agggtgtgtttggatgaagggtttaggaggggaagaaaatggaagacttacttttcttttttaaattacggacattataaaatgatttttttacaaaatt 3841231  T
Q  121 gaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||  |||||||| || ||||||||||||    
T  3841230 gaattaacaa-atgataaatgatgatataatacttc 3841196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 23091195 - 23091121
Alignment:
Q  31 tttggattgagggtttaggaggagaaggaaggggaggacttacttttctt-ttttaaattacgaatattataaaa 104  Q
    ||||||| |||||||||||||| ||||| |||||||| |||||||||||| |||||||||||| |||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggatattataaaa 23091121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 9719037 - 9719100
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||| ||||| |||||||||||||    
T  9719037 tgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacg 9719100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 15323221 - 15323296
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||| |||  || |||||| ||||||||||||||||    
T  15323221 ttttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaa 15323296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 15323406 - 15323339
Alignment:
Q  86 aattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatac 153  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  15323406 aattacggacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatac 15323339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 15353360 - 15353435
Alignment:
Q  19 ttttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||| |||  || |||||| ||||||||||||||||    
T  15353360 ttttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaa 15353435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 15353544 - 15353477
Alignment:
Q  86 aattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatac 153  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||||    
T  15353544 aattacggacattataaaatgatttttagaaaattgaattaacaacattataaatgatcatataatac 15353477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 25468446 - 25468532
Alignment:
Q  70 ttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||||||||||||||| | | |||||||||  ||||| |||||||| | |||||||| |||||||| || ||||||||||||    
T  25468446 ttacttttcttttttaaattatggacattataaaataattttaagaaaattaatttaacaacgtgataaatgattatataatacttc 25468532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 14515473 - 14515542
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||  ||  |||||||||||||||||||    
T  14515473 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacg 14515542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 15373672 - 15373729
Alignment:
Q  96 attataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatac 153  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  15373672 attataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatac 15373729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 10818459 - 10818327
Alignment:
Q  24 gggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaa 123  Q
    |||| ||||||||||||| |||||||||| | ||| ||||||||  ||||||||| ||||||||||||| | | ||| ||| | |||||| || ||| |     
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaac 10818360  T
Q  124 ttaacaacttgataaataatcatataatacttc 156  Q
     ||  ||| |||||||| |||||||||||||||    
T  10818359 atattaacatgataaatgatcatataatacttc 10818327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 16738239 - 16738172
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||||||||||||||||||||||| | ||||| |||||||   ||||||||||||||||||||||    
T  16738239 agggtttgtttggattgagggtttaggatgggaagg-aggggagagtttacttttcttttttaaattac 16738172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 23090995 - 23091066
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||| || |||||| | ||||||||||||||    
T  23090995 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggctcacttttatcttttaaattacgaa 23091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 9721138 - 9721207
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||| ||||||||||| ||||| ||||||||  ||| ||||| |||||||||||||    
T  9721138 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacg 9721207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 10818229 - 10818298
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||    ||| |||||||||||||||||||    
T  10818229 agggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacg 10818298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 12811226 - 12811157
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||||| |||||||||||||||||||||| | ||||  ||||||||  ||||||||||| |||||||||    
T  12811226 ttagggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaatta 12811157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 23091045 - 23090996
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  23091045 gtgagccctcccctcccttcccctcctaaaccttcaatccaaacacaccc 23090996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 14515518 - 14515474
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  14515518 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14515474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 31798916 - 31798988
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacga 93  Q
    ||||||| ||||||||||||||||||||||||| |||  ||| || ||||  ||||| |||||||||||||||    
T  31798916 ttagggtgtgtttggattgagggtttaggaggataagagaggagatgactcgcttttattttttaaattacga 31798988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 4097751 - 4097688
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||||||||||||| |||| ||||| |||| |||  | |||||||||||||||||||||    
T  4097751 tgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacg 4097688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 14515717 - 14515634
Alignment:
Q  21 ttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaa 104  Q
    ||||||| ||||||||| |||||||||||||| ||||||| ||||||  |||  |||| ||||||||||| ||| | |||||||    
T  14515717 ttagggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaa 14515634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 19278275 - 19278213
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||||||||||| |||||||||| ||||| ||||||||  ||| |||||||||||||||||||    
T  19278275 tgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacg 19278213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 19278040 - 19278102
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||||||| |||||||||||||| ||||||||| |||   ||||||||| ||||||||||||    
T  19278040 tgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattac 19278102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 9719075 - 9719034
Alignment:
Q  223 cctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  9719075 cctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 10818271 - 10818230
Alignment:
Q  225 tcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  10818271 tcccctcccttcccctcctaaaccctcaatccaaacacaccc 10818230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 15323275 - 15323226
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| ||| | ||||||||||||| |||||||||||||||||||||||    
T  15323275 gtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccc 15323226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 15353414 - 15353365
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||||| ||| | ||||||||||||| |||||||||||||||||||||||    
T  15353414 gtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccc 15353365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 30487356 - 30487307
Alignment:
Q  217 gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  30487356 gtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 30487307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 9721183 - 9721139
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||    
T  9721183 ccctcccctcccttcccctcctaaaccttcaatccaaacacaccc 9721139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 33235948 - 33236020
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    |||||||| | |||||||||||| |||||| |||||||| || |||    |||||||||||||||||||||||    
T  33235948 tttagggtgtatttggattgaggatttaggtggagaagggagtggaaagtttacttttcttttttaaattacg 33236020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 30487306 - 30487373
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||||||  | ||||||| || ||||||||    
T  30487306 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 4097270 - 4097236
Alignment:
Q  232 ccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||||||| |||||||||||||||||||||||    
T  4097270 ccttcccctcctaaaccctcaatccaaacacaccc 4097236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 5585307 - 5585373
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttac-ttttcttttttaaattacgaa 94  Q
    ||||||||| |||||||||||||| ||||||| || ||   |||| |||||||||||||||||||||    
T  5585307 tgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaa 5585373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 19278236 - 19278278
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||    
T  19278236 ccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 31849116 - 31849174
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaa 87  Q
    |||| |||||||||||||| |||| ||||| ||||||||  ||| ||||||||||||||    
T  31849116 tgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaa 31849174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 665841 - 665917
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattat 100  Q
    ||||| ||||||||| |||||||||||||| ||||  ||||||||  | | ||||| ||||||||||| |||||||||    
T  665841 agggtgtgtttggat-gagggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattat 665917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 666092 - 666027
Alignment:
Q  22 tagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaa 87  Q
    |||||| ||||||||| | ||||||| ||||||||||||| ||||   ||| ||||||||||||||    
T  666092 tagggtatgtttggatggggggtttacgaggagaaggaagaggagagtttatttttcttttttaaa 666027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 2893068 - 2893019
Alignment:
Q  45 ttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    |||||| ||||| |||| |||||  |||||||||||||||||||||||||    
T  2893068 ttaggatgagaaagaagaggagggtttacttttcttttttaaattacgaa 2893019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 9051734 - 9051775
Alignment:
Q  225 tcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    |||| ||||||||||||  |||||||||||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacaccc 9051775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 9719273 - 9719208
Alignment:
Q  24 gggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatt 89  Q
    |||| ||||||||||||||||||| |||| ||||  ||||| ||  ||| ||||||||||||||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaatt 9719208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 30849951 - 30850045
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    ||||||||| |||| |||| ||||||||||||| ||| |||||||   |||||  |||||| || ||| ||| |||||||  |||||||||||||||    
T  30849951 aggggaggatttacatttcgtttttaaattacgcatactataaaatatttttt--aaaattaaaataataacatgataaacgatcatataatacttc 30850045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 7775991 - 7775959
Alignment:
Q  232 ccttcccctccaaaaccctcaatccaaacacac 264  Q
    |||||||||||||||||||| ||||||||||||    
T  7775991 ccttcccctccaaaaccctccatccaaacacac 7775959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 10818415 - 10818459
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| ||||| ||||||| |||| ||||||||||||||||||    
T  10818415 ccctcccctccctacccctcctaaactctcaatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 12811179 - 12811223
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| || |||||| ||| |||||||||||||||||||||||    
T  12811179 ccctcccctctcttcccatcctaaaccctcaatccaaacacaccc 12811223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 14515670 - 14515714
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14515670 ccctccctttccttcccctcctaaaccctccatccaaacacaccc 14515714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 184845 - 184718
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| ||||||||||||||  |||| | ||||||  ||||| ||||||||||||||| | | ||||||||| |||||||  ||||||||||||||    
T  184845 tgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaattatggacattataaaatgatttttttaaaattgaattaac 184746  T
Q  129 aacttgataaataatcatataatacttc 156  Q
    ||| ||||| || |||||||||||||||    
T  184745 aacatgatatattatcatataatacttc 184718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 242454 - 242331
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaac 128  Q
    ||||||||| || ||||||  ||| ||||| ||||||||  ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  242454 tgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaaattgaattaac 242355  T
Q  129 aacttgataaataatcatataata 152  Q
     || |||||||| || ||||||||    
T  242354 gacatgataaatgatgatataata 242331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 6581 - 6652
Alignment:
Q  20 tttagggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    |||||||| |||||||||||| | ||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 53081 - 53000
Alignment:
Q  71 tacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataata 152  Q
    |||||||||||||||||||| |   ||||| ||| ||||||| |||||||||| ||||||| |||||||| |||||||||||    
T  53081 tacttttcttttttaaattatgggcattatgaaatgattttttgaaaattgaactaacaacatgataaatgatcatataata 53000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 39434 - 39365
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacg 92  Q
    ||||| |||||||||||||||||||| |||  |||| ||||||||  |||||||||||||||||||||||    
T  39434 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacg 39365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 39180 - 39320
Alignment:
Q  17 aattttagggtttgtttggattgagggtttaggaggag-aaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttaga 115  Q
    ||||||||||| ||||||||| |||||||||||||| | || || |||||||  ||||||||| ||||||||||||| | | ||| ||| | |||||| |    
T  39180 aattttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaa 39279  T
Q  116 aaattgaattaacaacttgataaataatcatataatacttc 156  Q
    || || |  ||  ||| |||||||| |||||||||||||||    
T  39280 aagttaacatattaacatgataaatgatcatataatacttc 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 39389 - 39433
Alignment:
Q  222 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 266  Q
    ||||||| |||||| |||| | |||||||||||||||||||||||    
T  39389 ccctcccctccctttcccttctaaaccctcaatccaaacacaccc 39433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 30722 - 30786
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||||||||||| |||||||||| |||| |||||||| || |||||| ||||||||||||||||    
T  30722 gtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaa 30786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 37390 - 37454
Alignment:
Q  30 gtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaa 94  Q
    ||||| ||||||| |||||||||  ||||||||||||| || |||||| ||||||||||||||||    
T  37390 gtttgaattgaggatttaggagggcaaggaaggggagggctcacttttattttttaaattacgaa 37454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 37577 - 37494
Alignment:
Q  73 cttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||||||||||||||  | | ||||| | ||||||||||||| | |||||||||| |||||| | ||||||||| |||||    
T  37577 cttttcttttttaaattacagacaatataagatgatttttagaaaacttaattaacaacatgataagtgatcatataacacttc 37494  T

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Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 121991 - 122065
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaa 104  Q
    ||||||||||||||||||||||| |||  || |||||||| || ||||||||||| |||||||||| |||||||||    
T  121991 tgtttggattgagggtttaggagaagagaga-ggggaggatttgcttttctttttaaaattacgaacattataaaa 122065  T

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Target: scaffold0198 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 3153 - 3215
Alignment:
Q  29 tgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattac 91  Q
    ||||||||||||| |||||||||| ||||| |||||||   ||||||||||||||||||||||    
T  3153 tgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattac 3215  T

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Target: scaffold0198; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 3190 - 3150
Alignment:
Q  224 ctcccatcccttcccctccaaaaccctcaatccaaacacac 264  Q
    ||||| ||||||||||||| |||| ||||||||||||||||    
T  3190 ctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0095 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 8354 - 8258
Alignment:
Q  60 aggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaaaattgaattaacaacttgataaataatcatataatacttc 156  Q
    |||||||| ||||| || ||||||||| |||   |  ||||||||  ||||||| ||||||||||||||||| |||| ||| |||||||||||||||    
T  8354 aggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaattaacaacatgattaatgatcatataatacttc 8258  T

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Target: scaffold0262 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 16296 - 16363
Alignment:
Q  23 agggtttgtttggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaatta 90  Q
    ||||||||||||||| ||||||||||||||  || | ||||||||  ||||||||| |||||||||||    
T  16296 agggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaatta 16363  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 69216 - 69340
Alignment:
Q  33 tggattgagggtttaggaggagaaggaaggggaggacttacttttcttttttaaattacgaatattataaaaggatttttagaa-aattgaattaacaac 131  Q
    ||||| |||||||||| |||  || | |||||||  |||| |||| | ||||||| |||||| |||||||||   |||| | || ||||||| ||||||     
T  69216 tggatggagggtttagaagggaaatggaggggagagcttatttttatattttaaaatacgaacattataaaatctttttaaaaagaattgaaataacaag 69315  T
Q  132 ttgataaataatcatataatacttc 156  Q
     |||||||| |||||||||||||||    
T  69316 atgataaatgatcatataatacttc 69340  T

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