View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3229_low_92 (Length: 294)
Name: NF3229_low_92
Description: NF3229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3229_low_92 |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 15771937 - 15771663
Alignment:
| Q |
1 |
tcttggaaccctaattgcatttcagatgcacaatcttctgatttgaaactaaccaattcaatcattcactcacaaaatgtgttctacaaagagtttaaag |
100 |
Q |
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| T |
15771937 |
tcttggaaccctaattgcatttcagatgcacaatcttctgatttgaaactaaccaattcaatcattcactcacaaaatgtgttctacaaagagttcaaag |
15771838 |
T |
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| Q |
101 |
ggttatgcctagcaatgttgtatttaagaggattttggttttgtcattcaaaatggattagcacacattttgttgcccgcttgccttccatttctgtata |
200 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15771837 |
ggttatgcctagcaatgttgtatttaagacgattttggttttgtcattcaaaatggattagcacacattttgttgcccgcttgccttccatttctgtata |
15771738 |
T |
|
| Q |
201 |
aattataatttgctaattaaatacactttctcttgttgtaagtgcattcattcagaattcaagattctagattat |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15771737 |
aattataatttgctaattaaatacactttctcttgttgtaagtgcattcattcagaattcaagattctagattat |
15771663 |
T |
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