View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3231_high_77 (Length: 261)
Name: NF3231_high_77
Description: NF3231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3231_high_77 |
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Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 4807611 - 4807435
Alignment:
| Q |
13 |
aatataataaattgacaatgagataggaagacacaaatagagataaaattagatcttgactaaacatgtagaaatacaatgtgatcaaatataatggttg |
112 |
Q |
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||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
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| T |
4807611 |
aatataataaattgacaataagataggaagacaaaaatagagataaaattagatcttgactaaacatgtagaaatacaaggtgatcaaatataatagttg |
4807512 |
T |
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| Q |
113 |
taaagtaaaacttgcaaaagagacatttttgctaaggtgaaacctcataaaattggtagaatatgtacttatcatcc |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
4807511 |
taaagtaaaacttgcaaaagagacatttttgctaaggtgaaacctcagaaaattggtagaatatgtacttatcatcc |
4807435 |
T |
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