View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3231_low_105 (Length: 223)
Name: NF3231_low_105
Description: NF3231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3231_low_105 |
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Alignment Details
Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 40542739 - 40542878
Alignment:
| Q |
67 |
acaaatacaaaaccttctggaaaccctcattttatttcaacgttaaaatcagttttaaaagttacttggatcagatagtgttagtggagactttgaaaat |
166 |
Q |
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| T |
40542739 |
acaaatacaaaaccttctggaaaccctcattttatttcaacgttaaaatcagttttaaaagttacttggatcagatagtgttagtggagactttgaaaat |
40542838 |
T |
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| Q |
167 |
gaaaatgcgtagatcatgatccagcttccaatccccttac |
206 |
Q |
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|||| ||||||||||||||||||||||||||||||||||| |
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| T |
40542839 |
gaaattgcgtagatcatgatccagcttccaatccccttac |
40542878 |
T |
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