View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3231_low_111 (Length: 212)
Name: NF3231_low_111
Description: NF3231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3231_low_111 |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 9369838 - 9370013
Alignment:
| Q |
18 |
taattaaatttcccttccatcacattaaatattgaaaaatttctcacgtctacttttgtttggttttgcatgactccacgtcgataattcgttaaaacac |
117 |
Q |
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| T |
9369838 |
taattaaatttccctttcatcaaattaaatattgaaaaatttctcacgtctacttttgtttggttttgcatgactccacgtcgataattcgttaaaacac |
9369937 |
T |
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| Q |
118 |
tactagaattctgcaaatttcctgcggaagtttctacgaccaaatatccgcaggaatagttgaggattttgctgcc |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9369938 |
tactagaattctgcaaatttcctgcggaagtttctacgaccaaatatccgcaggaatagttgaggattttgctgcc |
9370013 |
T |
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