View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3231_low_88 (Length: 250)
Name: NF3231_low_88
Description: NF3231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3231_low_88 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 44729869 - 44730105
Alignment:
| Q |
1 |
aacctctcttcttcatttatctgcaaactagtttcatattctccaatttcaactttctttttcttcaaaaaccttacaagccaaggaacaaagccttgag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44729869 |
aacctctcttcttcatttatctgcaaactagtttcaacttctccaatttcaactttctttttcttcaaaaaccttacaagccaaggaacaaagccttgag |
44729968 |
T |
|
| Q |
101 |
agctcatgagataattattggtattaagagctgagttagcgatcgaaagaattcgacgacaatcttcggcgcttaatccgacaggcttccctggtttcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
44729969 |
agctcatgagataattattggtattaagagctgagttagcgatcgaaagaattcgactacaatcttcggcgcttaatccgacaggcttccctggtttcat |
44730068 |
T |
|
| Q |
201 |
tggaaccatgacatattttttgttcatttctaggttc |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
44730069 |
tggaaccatgacatattttttgttcatttctaggttc |
44730105 |
T |
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