View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3231_low_96 (Length: 242)
Name: NF3231_low_96
Description: NF3231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3231_low_96 |
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Alignment Details
Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 46635025 - 46634931
Alignment:
| Q |
39 |
ttatagagactcgtatggaagggacttcttgcaggactactcccctcaatctaaaatttcaatcgtttagattttctttttaattttcaatattct |
134 |
Q |
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| T |
46635025 |
ttatagagactcgtatggaagggacttcttgcaggactactcccctcaatctaaaatttc-atcgtttagattttctttttaattttcaatattct |
46634931 |
T |
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