View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3232_high_13 (Length: 248)
Name: NF3232_high_13
Description: NF3232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3232_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 28524995 - 28524752
Alignment:
| Q |
1 |
taaaagttgatttggagaccgatttagcaaacgatttgaaaaatcagtcgctaaattgtcactaaatcattc--taaatgatgatttgttagtagtagct |
98 |
Q |
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| T |
28524995 |
taaaagttgatttggagaccgatctagcaaacgatttgaaaaatcagtcgctaaattgtcactaaatcattcgctaaatgatgatttgttagtagtagct |
28524896 |
T |
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| Q |
99 |
aatcttagaatattatgtattatatgcaataattaaaaagaagttaattttgcttgttacatgtaaaacatactagacaaactatgcaagtcaatgagat |
198 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28524895 |
aatcttagaatattatgtactatatgcaataattaaaaagaagttaattttgcttgttacatgtaaaacatactagacaaactatgcaagtcaatgagat |
28524796 |
T |
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| Q |
199 |
agagactatacagaagattaaagtagtggttagtacctttgctt |
242 |
Q |
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|||||||||||||||||||||||||| |||||||||| ||||| |
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| T |
28524795 |
agagactatacagaagattaaagtagaagttagtacctatgctt |
28524752 |
T |
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