View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3232_low_18 (Length: 227)
Name: NF3232_low_18
Description: NF3232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3232_low_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 28525342 - 28525122
Alignment:
| Q |
7 |
cataagagccaggaatagaaagactatcctgaatatcatgatgcctgcaagaaaatgaagagaggaacaattcatggctagtgttaggatctaaatatct |
106 |
Q |
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| T |
28525342 |
cataagagccaggaatagaaagactatcctgaatatcatgatgcctgcaagaaaatgaagagaggaacaattcatggctagtgttaggatctaaatatct |
28525243 |
T |
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| Q |
107 |
gtgaaagaatcaatcttctcatgcaacaaaaataaaataggaaaaagtatagtattccatttcaaaacttctatagaccacttttctttaccagtttttg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
28525242 |
gtgaaagaatcaatcttctcatgcaacaaaaataaaataggaaaaagtatagtattccatttcaaaacttctatagactacttttctttaccagtttttg |
28525143 |
T |
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| Q |
207 |
cttatattgtatgaaaaacac |
227 |
Q |
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||||||||||||||||||||| |
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| T |
28525142 |
cttatattgtatgaaaaacac |
28525122 |
T |
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