View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3234_high_37 (Length: 264)
Name: NF3234_high_37
Description: NF3234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3234_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 55145762 - 55145528
Alignment:
| Q |
20 |
aacgaggacatccctagttgagcccatcaaagcataattcatgtgtgtgattacaccaagtggatggtaagagaattggatgctgttatatgagttaaga |
119 |
Q |
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| T |
55145762 |
aacgaggacatccctagttgagcccatcaaagcataattcatgtgtgtgattacaccaagtggatggtaagagaattggatgctgttatatgagttaaga |
55145663 |
T |
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| Q |
120 |
agtgcagtgatcccttctctcaaaagagtcctataaggatctcctctccctttcagtccataccacaatgtcatgtctgttccatatctccttgctgcaa |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55145662 |
agtgcagtgatcccttctctcaaaagagtcctataaggatctcctctccctttcagtccataccacaatgtcatgtctgttccatatctccttgctgcaa |
55145563 |
T |
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| Q |
220 |
ccattccaaaagctacacctacttttgtgtctctg |
254 |
Q |
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| T |
55145562 |
ccattccaaaagctacacctacttttgtgtctctg |
55145528 |
T |
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