View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3234_high_57 (Length: 214)
Name: NF3234_high_57
Description: NF3234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3234_high_57 |
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Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 54690952 - 54691152
Alignment:
| Q |
1 |
ttataatagtgaccggagggtgtaagtgagagacacttctctacaatctatgcaataatgtttagatattccaaatctcgattagttagcctcattgatt |
100 |
Q |
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| T |
54690952 |
ttataatagtgaccggagggtgtaagtgagagacacttctctataatctatacaataatgtttagatattccaaatcttgattagttagcctcattgatt |
54691051 |
T |
|
| Q |
101 |
catacgtgtttaattaacatgagattcctaatgtctcataataactatatacactcagaagatgtccgtgcaagtaattgatagtcaggattgttaaaaa |
200 |
Q |
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| T |
54691052 |
catacgtgtttaattaacatgagattcctaatgtctcataataactatatacactcagaagatgtccgtgcaagtaattgatagtcaggattgttaaaaa |
54691151 |
T |
|
| Q |
201 |
a |
201 |
Q |
| |
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| T |
54691152 |
a |
54691152 |
T |
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