View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3234_high_7 (Length: 459)
Name: NF3234_high_7
Description: NF3234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3234_high_7 |
 |  |
|
| [»] scaffold0330 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 271 - 448
Target Start/End: Complemental strand, 31514781 - 31514600
Alignment:
| Q |
271 |
tttgactttataaattcaaaaatcatggtgttcaaatttcatctggacaaacgtaaaatagccaataataacaattattaatgataacttctcc----nn |
366 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31514781 |
tttgactttgtaaattcaaaaatcatggtgttcaaatttcatctggacaaacgtaaaatagccaataataacaattattaatgataacttctcctttttc |
31514682 |
T |
 |
| Q |
367 |
nnnnnnnnnnnntaccttttgtttttaaatgtttaagactagcaacaaaattcacatacattaaggattcgttttgtgcaca |
448 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
31514681 |
aaagaaaaaaaattacttttgtttttaaatgtttaagactagcaacaaaattcacatacattaaagattccttttgtgcaca |
31514600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 31515006 - 31514922
Alignment:
| Q |
19 |
tttcattaatttaaacttcttaatcaaatttaatttttgtatatttaaatgtattattataaactatagttgagatatggtgtaa |
103 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31515006 |
tttcattaatttaaacttcttaatcaattttaatttttgtatatttaaatgtattattataaactatagttgagatatggtgtaa |
31514922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 31514833 - 31514771
Alignment:
| Q |
192 |
gataaaatgaaatgactttttggtccaagatgtgtcaacacaatgataagaatttgactttgt |
254 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31514833 |
gataaaatgaaatgactttttggtccaagatgtgtcaacacaatgataagaatttgactttgt |
31514771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 30992489 - 30992453
Alignment:
| Q |
48 |
ttaatttttgtatatttaaatgtattattataaacta |
84 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30992489 |
ttaatttttgcatatttaaatgtattattataaacta |
30992453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 7599107 - 7599062
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||| |||| ||||| |
|
|
| T |
7599107 |
tttttgcatatttaagtgtattattataaactataattgaaatatg |
7599062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 9730312 - 9730263
Alignment:
| Q |
48 |
ttaatttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
9730312 |
ttaatttttacatatttaaatgtattattataaactagaattgaaatatg |
9730263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 22738769 - 22738716
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatggtgtaata |
105 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | |||| ||||||| ||||| |
|
|
| T |
22738769 |
tttttgcatatttaaatgtattattataaactagaattgaaatatggtataata |
22738716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 2620122 - 2620173
Alignment:
| Q |
46 |
atttaatttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
2620122 |
atttattttttgcatatttaaatgtattattataaactagaattgaaatatg |
2620173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 2510632 - 2510587
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
2510632 |
tttttgcatatttaaatgtattattataaactagaattgaaatatg |
2510587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 85
Target Start/End: Complemental strand, 9617466 - 9617433
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactat |
85 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
9617466 |
tttttgcatatttaaatgtattattataaactat |
9617433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 35224209 - 35224164
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||| |||| ||||| |
|
|
| T |
35224209 |
tttttgtatatttaaatgaattattataatctataattgaaatatg |
35224164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 25107331 - 25107363
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaacta |
84 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
25107331 |
tttttgcatatttaaatgtattattataaacta |
25107363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 31955636 - 31955668
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaacta |
84 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |
|
|
| T |
31955636 |
tttttgtatatttaattgtattattataaacta |
31955668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 38876795 - 38876750
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
38876795 |
tttttgtatatttaaatgtattattataaactagaattgaaatatg |
38876750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 40514938 - 40514891
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatggt |
99 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | |||| ||||||| |
|
|
| T |
40514938 |
tttttgcatatttaaatgtattattataaactagaattgaaatatggt |
40514891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 6391397 - 6391442
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | |||| ||||| |
|
|
| T |
6391397 |
tttttgtatatttaaatgtattactataaactagaattgaaatatg |
6391442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 40201782 - 40201827
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
40201782 |
tttttgaatatttaaatgtattattataaactagaattgaaatatg |
40201827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 41386882 - 41386927
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | |||| ||||| |
|
|
| T |
41386882 |
tttttgtatatttaaatatattattataaactagacttgaaatatg |
41386927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 28207268 - 28207300
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaacta |
84 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
28207268 |
tttttgtatatataaatgtattattataaacta |
28207300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 32526551 - 32526506
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
32526551 |
ttttcgtatatttaaatgtattattataaactagagttgaaatatg |
32526506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 39721995 - 39722040
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
39721995 |
tttttgtatatttaaatgtattattataaactagaattgaaatatg |
39722040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 41819221 - 41819266
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
41819221 |
tttttgtatatttaaatgtattattataaactagaattgaaatatg |
41819266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 26660292 - 26660247
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| |||| ||||| |
|
|
| T |
26660292 |
tttttgcatatttaaatgtattattataaattataattgaaatatg |
26660247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 32519898 - 32519853
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
32519898 |
tttttgcacatttaaatgtattattataaactataattgaaatatg |
32519853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 6892962 - 6893006
Alignment:
| Q |
53 |
ttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
6892962 |
ttttgcatatttaaatgtattattataaactagaattgaaatatg |
6893006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 20601761 - 20601716
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
20601761 |
ttttggtatatttaaatgtattattataaactataattgaaatatg |
20601716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 29697654 - 29697622
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaacta |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
29697654 |
tttttgtatatttaaatgtattattataaacta |
29697622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 29717498 - 29717564
Alignment:
| Q |
19 |
tttcattaatttaaacttcttaatcaaatttaattttt-gtatatttaaatgtattattataaacta |
84 |
Q |
| |
|
|||||||||||||||||| | |||| | || |||||| ||||||||||||||||||||| |||||| |
|
|
| T |
29717498 |
tttcattaatttaaacttatcaatctacattgatttttagtatatttaaatgtattattacaaacta |
29717564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 22990677 - 22990632
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
22990677 |
tttttgcatatttaaatatattattataaactataattgaaatatg |
22990632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0330 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0330
Description:
Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 10902 - 10940
Alignment:
| Q |
48 |
ttaatttttgtatatttaaatgtattattataaactata |
86 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
10902 |
ttaatttttgcatatttaaatgtattattctaaactata |
10940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 20953176 - 20953138
Alignment:
| Q |
59 |
atatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
20953176 |
atatttaaatgtattattataaactataattgaaatatg |
20953138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 3022770 - 3022725
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
3022770 |
tttttgcatatttaaatgtattattataaactagaattgaaatatg |
3022725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 16010554 - 16010599
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||| |||| ||||| |
|
|
| T |
16010554 |
tttttgcatatttatatgtattattataaactataattgaaatatg |
16010599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 22159907 - 22159952
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||| |||| ||||| |
|
|
| T |
22159907 |
tttttgtatatttatatgtattattataaattataattgaaatatg |
22159952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 45339245 - 45339200
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
45339245 |
tttttgcatatttaaatatattattataaactataattgaaatatg |
45339200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 4362367 - 4362323
Alignment:
| Q |
53 |
ttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
4362367 |
ttttgcatatttaaatgtattattataaactaaaattgaaatatg |
4362323 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 21144448 - 21144493
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| |||| ||||| |
|
|
| T |
21144448 |
tttttgtatatatgaatgtattattataaactataattgaaatatg |
21144493 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 37849341 - 37849308
Alignment:
| Q |
48 |
ttaatttttgtatatttaaatgtattattataaa |
81 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
37849341 |
ttaattttcgtatatttaaatgtattattataaa |
37849308 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 39727408 - 39727363
Alignment:
| Q |
52 |
tttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
39727408 |
tttttgcatgtttaaatgtattattataaactataattgaaatatg |
39727363 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 28031927 - 28031971
Alignment:
| Q |
53 |
ttttgtatatttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
28031927 |
ttttttatatttaaatgtattattataaactagaattgaaatatg |
28031971 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 17225218 - 17225182
Alignment:
| Q |
61 |
atttaaatgtattattataaactatagttgagatatg |
97 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
17225218 |
atttaaatgtattattataaactataattgaaatatg |
17225182 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 30374776 - 30374736
Alignment:
| Q |
59 |
atatttaaatgtattattataaactatagttgagatatggt |
99 |
Q |
| |
|
||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
30374776 |
atatttaaatgtagtattataaactataattgaaatatggt |
30374736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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