View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3234_low_67 (Length: 203)
Name: NF3234_low_67
Description: NF3234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3234_low_67 |
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Alignment Details
Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 4324919 - 4324745
Alignment:
| Q |
13 |
aatatcaatcattaaacgagccctaacctttttgcaggtttcttttgttgtcaattacaggttcatcaggcacctcttttcccttgctaagaatctttac |
112 |
Q |
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| T |
4324919 |
aatatcaatcactaaacgagccctaacctttttgcaggtttcttttgttgtcaattacaggttcatcaggcacctcttttcccttgctaagaatctttac |
4324820 |
T |
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| Q |
113 |
agccaaaccattttttgcagatgctaaaagggattctttgttaatacacacgggtggctgttttggtacaagaat |
187 |
Q |
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| T |
4324819 |
agccaaaccattttttgcagatgctaaaagggattctttgttaatacacacgggtggctgtttcggtacaagaat |
4324745 |
T |
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