View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3235_high_3 (Length: 321)

Name: NF3235_high_3
Description: NF3235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3235_high_3
NF3235_high_3
[»] chr4 (24 HSPs)
chr4 (101-232)||(13861512-13861643)
chr4 (18-100)||(33369909-33369991)
chr4 (101-234)||(25239891-25240024)
chr4 (18-93)||(33370841-33370916)
chr4 (113-214)||(18284497-18284598)
chr4 (101-197)||(16396136-16396232)
chr4 (101-172)||(8082303-8082374)
chr4 (101-197)||(45313379-45313475)
chr4 (113-187)||(12885523-12885597)
chr4 (153-234)||(17282412-17282493)
chr4 (101-197)||(26780685-26780781)
chr4 (22-73)||(6246811-6246862)
chr4 (101-187)||(10985584-10985670)
chr4 (101-170)||(8168016-8168085)
chr4 (101-197)||(21332414-21332510)
chr4 (114-157)||(15427951-15427994)
chr4 (114-157)||(15434569-15434612)
chr4 (34-73)||(33409419-33409458)
chr4 (129-187)||(26778762-26778820)
chr4 (50-100)||(38009284-38009334)
chr4 (32-73)||(23383337-23383378)
chr4 (52-93)||(34154801-34154842)
chr4 (113-197)||(12217788-12217872)
chr4 (22-102)||(22499944-22500024)
[»] chr5 (25 HSPs)
chr5 (18-100)||(32943517-32943599)
chr5 (131-234)||(13537926-13538029)
chr5 (113-234)||(20899478-20899599)
chr5 (114-234)||(23495545-23495664)
chr5 (113-197)||(33622373-33622457)
chr5 (18-93)||(32944450-32944525)
chr5 (115-234)||(36712534-36712652)
chr5 (101-234)||(22510178-22510311)
chr5 (34-104)||(35262448-35262518)
chr5 (249-302)||(23695331-23695384)
chr5 (107-197)||(41037521-41037611)
chr5 (22-99)||(26712358-26712435)
chr5 (22-99)||(26982096-26982173)
chr5 (131-187)||(19329824-19329880)
chr5 (131-222)||(5931399-5931490)
chr5 (101-172)||(24095451-24095522)
chr5 (101-187)||(28067894-28067981)
chr5 (264-310)||(34647925-34647971)
chr5 (153-190)||(5590619-5590656)
chr5 (249-302)||(23690292-23690345)
chr5 (32-100)||(18152670-18152738)
chr5 (34-70)||(25075017-25075053)
chr5 (34-70)||(25132986-25133022)
chr5 (22-93)||(26711575-26711647)
chr5 (22-93)||(26981312-26981384)
[»] scaffold0096 (1 HSPs)
scaffold0096 (101-197)||(10742-10838)
[»] chr1 (20 HSPs)
chr1 (114-234)||(49472400-49472519)
chr1 (101-234)||(21815426-21815559)
chr1 (104-197)||(21817605-21817698)
chr1 (102-215)||(19441982-19442095)
chr1 (101-186)||(19967289-19967374)
chr1 (131-196)||(24973787-24973852)
chr1 (32-100)||(29334214-29334282)
chr1 (105-187)||(8995313-8995395)
chr1 (34-100)||(40028764-40028830)
chr1 (101-197)||(9859205-9859301)
chr1 (32-100)||(43316357-43316425)
chr1 (33-100)||(38932109-38932176)
chr1 (264-310)||(17721861-17721907)
chr1 (129-197)||(33029027-33029095)
chr1 (22-73)||(11469108-11469159)
chr1 (34-73)||(31788258-31788297)
chr1 (51-101)||(47334899-47334949)
chr1 (34-71)||(3789320-3789357)
chr1 (45-93)||(2687720-2687768)
chr1 (132-172)||(38622062-38622102)
[»] chr6 (20 HSPs)
chr6 (101-215)||(29094886-29095000)
chr6 (113-235)||(17756899-17757021)
chr6 (101-187)||(23574637-23574723)
chr6 (113-190)||(27964965-27965042)
chr6 (101-197)||(21508508-21508604)
chr6 (101-187)||(15119591-15119676)
chr6 (238-310)||(31023404-31023476)
chr6 (113-187)||(18729165-18729239)
chr6 (101-187)||(18736244-18736330)
chr6 (102-187)||(18043522-18043607)
chr6 (102-181)||(19857705-19857784)
chr6 (101-203)||(15369493-15369595)
chr6 (51-93)||(25067849-25067891)
chr6 (113-197)||(29482825-29482909)
chr6 (101-187)||(4409440-4409527)
chr6 (131-170)||(18258494-18258533)
chr6 (135-187)||(8306303-8306355)
chr6 (101-203)||(15349497-15349599)
chr6 (32-93)||(18290222-18290283)
chr6 (101-197)||(23524254-23524350)
[»] chr7 (19 HSPs)
chr7 (101-234)||(18153325-18153458)
chr7 (18-103)||(32548639-32548724)
chr7 (101-215)||(47295552-47295666)
chr7 (18-93)||(32547710-32547785)
chr7 (101-187)||(20093779-20093865)
chr7 (101-215)||(21592745-21592859)
chr7 (101-215)||(30770058-30770172)
chr7 (102-199)||(21801716-21801813)
chr7 (114-187)||(38612801-38612874)
chr7 (114-197)||(22705833-22705915)
chr7 (131-187)||(29165092-29165148)
chr7 (114-197)||(7595587-7595670)
chr7 (101-172)||(9548829-9548900)
chr7 (129-187)||(21802694-21802752)
chr7 (32-73)||(30915761-30915802)
chr7 (32-100)||(30402833-30402901)
chr7 (52-100)||(40258734-40258782)
chr7 (114-190)||(40635520-40635594)
chr7 (34-70)||(46251420-46251456)
[»] scaffold0265 (2 HSPs)
scaffold0265 (101-234)||(17250-17383)
scaffold0265 (104-197)||(15111-15204)
[»] chr8 (15 HSPs)
chr8 (105-202)||(33273396-33273493)
chr8 (102-197)||(11709614-11709709)
chr8 (101-185)||(22609364-22609447)
chr8 (100-187)||(32008883-32008970)
chr8 (101-190)||(25820957-25821046)
chr8 (33-103)||(37562292-37562362)
chr8 (101-197)||(7454522-7454618)
chr8 (101-197)||(41280678-41280774)
chr8 (33-100)||(13935034-13935101)
chr8 (131-234)||(18573917-18574020)
chr8 (101-197)||(7999882-7999978)
chr8 (131-215)||(17775835-17775919)
chr8 (131-181)||(10532640-10532690)
chr8 (101-170)||(18040358-18040426)
chr8 (32-73)||(40450966-40451007)
[»] chr2 (14 HSPs)
chr2 (101-197)||(27347402-27347498)
chr2 (101-197)||(3770494-3770590)
chr2 (113-197)||(23932913-23932997)
chr2 (113-197)||(25133806-25133890)
chr2 (131-197)||(3105438-3105504)
chr2 (101-170)||(23755688-23755757)
chr2 (34-93)||(34617660-34617719)
chr2 (101-187)||(41266066-41266152)
chr2 (32-93)||(36390964-36391025)
chr2 (37-100)||(36719007-36719070)
chr2 (101-170)||(19092981-19093050)
chr2 (34-71)||(26021037-26021074)
chr2 (101-162)||(26159097-26159158)
chr2 (32-100)||(7868121-7868189)
[»] chr3 (7 HSPs)
chr3 (32-100)||(44406939-44407007)
chr3 (33-103)||(51420858-51420928)
chr3 (113-169)||(19790537-19790593)
chr3 (129-197)||(22915284-22915352)
chr3 (34-71)||(50305649-50305686)
chr3 (46-94)||(35458853-35458901)
chr3 (32-100)||(47481221-47481289)
[»] scaffold0362 (1 HSPs)
scaffold0362 (115-215)||(7233-7333)
[»] scaffold0034 (1 HSPs)
scaffold0034 (102-197)||(56229-56324)
[»] scaffold0026 (1 HSPs)
scaffold0026 (104-187)||(151164-151247)
[»] scaffold0083 (1 HSPs)
scaffold0083 (101-187)||(4066-4152)
[»] scaffold0002 (2 HSPs)
scaffold0002 (101-197)||(391694-391790)
scaffold0002 (131-187)||(381005-381061)
[»] scaffold1272 (1 HSPs)
scaffold1272 (101-197)||(1977-2073)
[»] scaffold0192 (1 HSPs)
scaffold0192 (101-197)||(12554-12650)
[»] scaffold0084 (1 HSPs)
scaffold0084 (101-189)||(54474-54562)
[»] scaffold0008 (2 HSPs)
scaffold0008 (113-197)||(242907-242991)
scaffold0008 (131-186)||(253558-253613)
[»] scaffold0280 (1 HSPs)
scaffold0280 (101-172)||(910-981)
[»] scaffold0483 (1 HSPs)
scaffold0483 (131-197)||(9364-9430)
[»] scaffold0150 (1 HSPs)
scaffold0150 (101-186)||(29927-30012)
[»] scaffold0042 (1 HSPs)
scaffold0042 (113-197)||(68907-68991)
[»] scaffold0063 (1 HSPs)
scaffold0063 (115-197)||(36664-36745)
[»] scaffold0170 (1 HSPs)
scaffold0170 (131-168)||(16216-16253)
[»] scaffold0111 (1 HSPs)
scaffold0111 (105-170)||(2702-2767)


Alignment Details
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 13861643 - 13861512
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||| |||||| |     
T  13861643 gttctggaccggccaaaaggatctttgactcatttacttaggcccaataccatccaaagcccaaacaccacgtctggtaaaattactcgcgacacacccc 13861544  T
Q  201 tcccacacgagggggctgcacgaaacaaaaga 232  Q
    | |||| |||||||| |||||| ||| |||||    
T  13861543 ttccacgcgaggggggtgcacggaacgaaaga 13861512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 33369991 - 33369909
Alignment:
Q  18 tatagttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  33369991 tatagttctctacctgatctaatggctaacattaactttcccatggtgggaaacaaatatcatttcccatgctaaatcccacc 33369909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 25240024 - 25239891
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacaca-ctc 199  Q
    |||||||| || ||||||||||||| | | ||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||| ||||| |||    
T  25240024 gttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactccaaagcctaaacaccacgtttgacaaaattactcgcgacacacctc 25239925  T
Q  200 ttcccacacgagggggctgcacgaaacaaaagaga 234  Q
    ||  ||| |||||||| |||||| ||| |||||||    
T  25239924 tt-tcacgcgaggggggtgcacggaacgaaagaga 25239891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 33370841 - 33370916
Alignment:
Q  18 tatagttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    |||| |||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||||||||    
T  33370841 tataattctctacttgatctaatggctaacattaactttcccatggtgggaaacaagtatcctttcccatgctaaa 33370916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 18284497 - 18284598
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagg 212  Q
    ||||||||||||| | | |||||| |||||||||||||||||||||||||||||| |||| ||| ||||||||||| | |||||| | | |||| |||||    
T  18284497 ccaaaaggatctttggcccatttaattaggcccaataccatccaaagcccaaacatcacgtttggcaaaattactcacgacacaccccttccacgcgagg 18284596  T
Q  213 gg 214  Q
    ||    
T  18284597 gg 18284598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 16396136 - 16396232
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || ||||||||||||| | | |||||||||||||||||||| |||||||||| |||||||||| ||| |||| ||||| || ||||||    
T  16396136 gttctggaccggccaaaaggatctttggcccatttacttaggcccaatacaatccaaagccaaaacaccacgtttggcaaagttacttgcgacacac 16396232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 8082374 - 8082303
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacg 172  Q
    |||||||| || ||||||||||||| | | |||| ||||||||||||||| |||||||||||||||||||||    
T  8082374 gttctggaccgtccaaaaggatcttaggcccattcacttaggcccaatacaatccaaagcccaaacaccacg 8082303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 45313475 - 45313379
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || ||||||||| ||| ||| |||||||||||||||||||| || |||||||||| ||||| | ||| ||| |||||| || ||||||    
T  45313475 gttctggaccggccaaaaggaactttgacccatttacttaggcccaatacaattcaaagcccaagcaccatgtttggcaacattacttgcgacacac 45313379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 12885597 - 12885523
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||||  || ||| |||||||||||||||||||| ||||||| ||||||||||||| ||| |||| |||||    
T  12885597 ccaaaaggacttttgacccatttacttaggcccaatacaatccaaaacccaaacaccacgtttggcaaagttact 12885523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 17282412 - 17282493
Alignment:
Q  153 tccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagggggctgcacgaaacaaaagaga 234  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||||| | | |||| |||||||| |||||| ||| |||||||    
T  17282412 tccaaagcccagacaccacgtttggcaaaattactcgcgacacaccccttccacgcgaggggggtgcacggaacgaaagaga 17282493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 26780685 - 26780781
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || |||||||||  || | | ||||||| |||||||||||| || |||||||||||||||||| ||| ||| |||||| || ||||||    
T  26780685 gttctggaccggccaaaaggagttttggcccatttacataggcccaatactattcaaagcccaaacaccacgtttggcaacattacttgctacacac 26780781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 6246862 - 6246811
Alignment:
Q  22 gttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaa 73  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||||    
T  6246862 gttctctaccttatctaatggtcaaaattaactttcccatggtgggaaacaa 6246811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 10985584 - 10985670
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||| ||  |||||||| ||| | | |||||||||||||||||||| ||||||||  ||||||||||| ||| |||| |||||    
T  10985584 gttctggaccgggcaaaaggacctttggcccatttacttaggcccaatacaatccaaaggtcaaacaccacgtttggcaaagttact 10985670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 8168085 - 8168016
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacacca 170  Q
    |||||| ||||  ||||||||  || ||| |||||||||||| ||||||| |||||||||||||||||||    
T  8168085 gttctgaatcgggcaaaaggagttttgacccatttacttaggtccaatacaatccaaagcccaaacacca 8168016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 21332414 - 21332510
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||| ||||| |||||| |||||| | | |||||||||||| ||||||| || ||||| |||||||| ||| ||| |||| ||||| || ||||||    
T  21332414 gttctagatcggccaaaatgatctttggcccatttacttaggtccaatacaattcaaagtccaaacactacgtttggcaaagttacttgcgacacac 21332510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 15427994 - 15427951
Alignment:
Q  114 caaaaggatcttggactcatttacttaggcccaataccatccaa 157  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||    
T  15427994 caaaaggatcttagacccatttacttaggcccaatacaatccaa 15427951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 15434612 - 15434569
Alignment:
Q  114 caaaaggatcttggactcatttacttaggcccaataccatccaa 157  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||    
T  15434612 caaaaggatcttagacccatttacttaggcccaatacaatccaa 15434569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 33409419 - 33409458
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaacaa 73  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  33409419 atctaatggataaaatttactttcctatggtgggaaacaa 33409458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 26778762 - 26778820
Alignment:
Q  129 ctcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    ||||||||||||||| |||||| || |||||| ||||||||| | ||||||| ||||||    
T  26778762 ctcatttacttaggctcaatactattcaaagctcaaacaccatgtttgacaacattact 26778820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 38009334 - 38009284
Alignment:
Q  50 taactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||| | |||||||||||||| |||| ||||||||||||||| |||||    
T  38009334 taacttttccatggtgggaaacaattatcctttcccatgctaaatcccacc 38009284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 23383378 - 23383337
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaa 73  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||    
T  23383378 tgatcgaatggataaaattaactttcccatggtgggaaacaa 23383337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 34154842 - 34154801
Alignment:
Q  52 actttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    ||||||| |||||||||||||| | |||||||||||||||||    
T  34154842 actttcccatggtgggaaacaagtttcttttcccatgctaaa 34154801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 12217872 - 12217788
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||| ||| | | ||||||||||| || ||||| ||||| |||||||||||| || ||  |||||||||| || ||||||    
T  12217872 ccaaaaggacctttggcccatttacttagtcctaatacaatccacagcccaaacaccgcgtttagcaaaattacttgcaacacac 12217788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 22499944 - 22500024
Alignment:
Q  22 gttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccaccgt 102  Q
    ||||||||  ||||| ||||| | ||| ||||||||||||||||| |||||| | || ||||||||| |||| || |||||    
T  22499944 gttctctatttgatccaatggtttaaaataactttcctatggtggaaaacaattctcctttcccatgttaaactctaccgt 22500024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 32943599 - 32943517
Alignment:
Q  18 tatagttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  32943599 tatagttctctacctgatctaatggctaacattaactttcccatggtgggaaacaaatatcctttcccatgctaaatcccacc 32943517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 13538029 - 13537926
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagggggctgcacgaaacaaaa 230  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||| | | |||| |||||||| || ||| ||| |||    
T  13538029 catttacttaggcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacaccccttccacgcgaggggggtgtacggaacgaaa 13537930  T
Q  231 gaga 234  Q
    ||||    
T  13537929 gaga 13537926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 20899478 - 20899599
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagg 212  Q
    ||||||||||||| | | |||| ||||| ||||| ||||||||||||||||||||||||| |||  |||||||||||| |||||| | | |||| |||||    
T  20899478 ccaaaaggatctttggcccattcacttaagcccagtaccatccaaagcccaaacaccacgtttggaaaaattactcgcgacacaccccttccacgcgagg 20899577  T
Q  213 gggctgcacgaaacaaaagaga 234  Q
    ||| |||||| ||| |||||||    
T  20899578 ggggtgcacggaacgaaagaga 20899599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 23495664 - 23495545
Alignment:
Q  114 caaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgaggg 213  Q
    |||||||||||| ||| ||||||||||||| ||||| |||||||||||||||||||||| ||  ||||||||||||| |||||| | | |||| | ||||    
T  23495664 caaaaggatctttgacccatttacttaggctcaatatcatccaaagcccaaacaccacgttttgcaaaattactcgcgacacaccccttccacgcaaggg 23495565  T
Q  214 ggctgcacgaaacaaaagaga 234  Q
    || |||||| ||| |||||||    
T  23495564 gg-tgcacggaacgaaagaga 23495545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 33622373 - 33622457
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||| || | ||| ||||||||||||| ||||||    
T  33622373 ccaaaaggatctttgacccatttacttaagcccaatacaatccaaagcccaaacatcatgtttggcaaaattactcgcgacacac 33622457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 32944450 - 32944525
Alignment:
Q  18 tatagttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    ||||||||||||| | ||||||||||||| ||||||||| | |||||||||||||| |||| ||||||||||||||    
T  32944450 tatagttctctacttaatctaatggctaacattaacttttccatggtgggaaacaagtatcatttcccatgctaaa 32944525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 36712534 - 36712652
Alignment:
Q  115 aaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagggg 214  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||| |||||||||| ||| ||||||||| ||| |||||| | | |||| | |||||    
T  36712534 aaaaggatctttgacccatttacttaggcccaatacactccaaagcctaaacaccacgtttggcaaaattacccgcgacacaccccttccacgctagggg 36712633  T
Q  215 gctgcacgaaacaaaagaga 234  Q
    | |||||| ||| |||||||    
T  36712634 g-tgcacggaacgaaagaga 36712652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 22510311 - 22510178
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| || ||||||||||||| | | ||||||||||||||||||||  |  ||||  ||||||||||| |||| |||||||| ||| |||||| |     
T  22510311 gttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactataaagttcaaacaccacgtttgataaaattacccgcgacacacccc 22510212  T
Q  201 tcccacacgagggggctgcacgaaacaaaagaga 234  Q
    | |||| ||||| || |||||| ||| |||||||    
T  22510211 ttccacgcgaggtgggtgcacggaacgaaagaga 22510178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 35262518 - 35262448
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccaccgttc 104  Q
    |||||||||  |||| ||||||||| ||||| |||||||| |||| |||||||||||||| ||||||||||    
T  35262518 atctaatggtcaaaaataactttcccatggtaggaaacaattatcctttcccatgctaaactccaccgttc 35262448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 23695384 - 23695331
Alignment:
Q  249 ataaatagtgatgacatgtaacataattgtacatcacaaggtaataatataatc 302  Q
    |||||||||||  |||||||||||||||||||||||||||  ||||||||||||    
T  23695384 ataaatagtgaccacatgtaacataattgtacatcacaagaaaataatataatc 23695331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 41037521 - 41037611
Alignment:
Q  107 gatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||| ||||||||| ||  ||| ||||||||||| | |||||| ||||||||||||||||| ||| ||| |||| ||||| || ||||||    
T  41037521 gatcggccaaaaggacctatgacccatttacttagactcaatacaatccaaagcccaaacactacggttggcaaacttacttgcaacacac 41037611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 26712358 - 26712435
Alignment:
Q  22 gttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccac 99  Q
    ||||| ||| |||||| |||| |||||||| |||||| |||||||||||||| |  | |||||||||||||| |||||    
T  26712358 gttctttacttgatctgatggttaaaattagctttcccatggtgggaaacaacttccctttcccatgctaaactccac 26712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 26982096 - 26982173
Alignment:
Q  22 gttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccac 99  Q
    ||||| ||| |||||| |||| |||||||| |||||| |||||||||||||| |  | |||||||||||||| |||||    
T  26982096 gttctttacttgatctgatggttaaaattagctttcccatggtgggaaacaacttccctttcccatgctaaactccac 26982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 19329824 - 19329880
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||||||||||||||| || ||||||||||| |||||| ||| ||| ||||||    
T  19329824 catttacttaggcccaatacaattcaaagcccaaataccacgtttggcaacattact 19329880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 5931490 - 5931399
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagggggctgcacg 222  Q
    |||||||||||||||||||| ||||| | |||||||| | || ||| |||||||||| |  |||||| | | |||||| |||||| ||||||    
T  5931490 catttacttaggcccaatacaatccacaacccaaacatcgcgtttggcaaaattacttgtgacacaccccttccacacaaggggggtgcacg 5931399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 24095522 - 24095451
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacg 172  Q
    |||||||| || |||||||||  || | | ||| |||||||||||||||| |||||||||||||| ||||||    
T  24095522 gttctggaccggccaaaaggagttttggcccatctacttaggcccaatacaatccaaagcccaaataccacg 24095451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 28067894 - 28067981
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatcc-aaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||| || ||||||||||||| ||| || ||||||| ||||||||| |||| ||||| ||| ||||||| ||| |||| |||||    
T  28067894 gttctggaccggccaaaaggatctttgacccacttacttacgcccaatacaatccaaaagcacaagcaccacgtttggcaaacttact 28067981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 34647971 - 34647925
Alignment:
Q  264 atgtaacataattgtacatcacaaggtaataatataatcatctctct 310  Q
    ||||||| |||||||||||||||||  ||||||| ||||||||||||    
T  34647971 atgtaacctaattgtacatcacaagagaataatagaatcatctctct 34647925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 5590619 - 5590656
Alignment:
Q  153 tccaaagcccaaacaccacgattgacaaaattactcgc 190  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  5590619 tccaaagcccaaacaccacgtttggcaaaattactcgc 5590656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 23690345 - 23690292
Alignment:
Q  249 ataaatagtgatgacatgtaacataattgtacatcacaaggtaataatataatc 302  Q
    |||||||| ||  ||||||||||||||||||||||||||   ||||||||||||    
T  23690345 ataaatagagaccacatgtaacataattgtacatcacaacacaataatataatc 23690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 18152738 - 18152670
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||||||| ||||||| ||||||  || ||||||||||| ||||  ||||| |||||||| |||||    
T  18152738 tgatctaatgggtaaaatttactttctcatagtgggaaacaactatccattcccgtgctaaatgccacc 18152670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 25075017 - 25075053
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaa 70  Q
    |||||||||||||| |||||||||| |||||||||||    
T  25075017 atctaatggctaaagttaactttcccatggtgggaaa 25075053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 25132986 - 25133022
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaa 70  Q
    |||||||||||||| |||||||||| |||||||||||    
T  25132986 atctaatggctaaagttaactttcccatggtgggaaa 25133022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 26711647 - 26711575
Alignment:
Q  22 gttctctacctgatctaatgg-ctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    ||||||||  ||||||| ||| |||||||| ||||||||||| |||||||||| | || |||||||| |||||    
T  26711647 gttctctaattgatctagtggtctaaaatttactttcctatgttgggaaacaactttcctttcccatactaaa 26711575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 26981384 - 26981312
Alignment:
Q  22 gttctctacctgatctaatgg-ctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    ||||||||  ||||||| ||| |||||||| ||||||||||| |||||||||| | || |||||||| |||||    
T  26981384 gttctctaattgatctagtggtctaaaatttactttcctatgttgggaaacaactttcctttcccatactaaa 26981312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 10742 - 10838
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||||| ||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  10742 gttctggatcggccaaaaggatctttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacac 10838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 49472519 - 49472400
Alignment:
Q  114 caaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgaggg 213  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| | |||| | |||||| ||||||    
T  49472519 caaaaggatctttgacccatttacttaggcccaataccatccaaagtccaaacaccgcgtttgacaaaattactcgcgaaacacccctcccacgcgaggg 49472420  T
Q  214 ggctgcacgaaacaaaagaga 234  Q
    || |||||| ||| |||||||    
T  49472419 gg-tgcacggaacgaaagaga 49472400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 21815426 - 21815559
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| || ||||||| ||||| | | |||| ||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||  |||||| |     
T  21815426 gttctggaccggccaaaagaatctttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacacccc 21815525  T
Q  201 tcccacacgagggggctgcacgaaacaaaagaga 234  Q
    | |||| |||||||| |||||| ||| |||||||    
T  21815526 ttccacgcgaggggggtgcacggaacgaaagaga 21815559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 21817605 - 21817698
Alignment:
Q  104 ctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||| || ||||||||||||| | | |||| ||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  21817605 ctggaccggccaaaaggatctttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattactcgcgacacac 21817698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 19441982 - 19442095
Alignment:
Q  102 ttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactctt 201  Q
    ||||||| || ||||||||| ||| | | |||||||||||||||||||| ||||||| | ||||||||||| ||| |||| ||||| || |||||| | |    
T  19441982 ttctggaccggccaaaaggacctttggcccatttacttaggcccaatacaatccaaaactcaaacaccacgtttggcaaagttacttgcgacacacccct 19442081  T
Q  202 cccacacgaggggg 215  Q
     |||||| ||||||    
T  19442082 tccacacaaggggg 19442095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 19967289 - 19967374
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattac 186  Q
    |||||||| ||  |||||||| ||| ||  |||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||    
T  19967289 gttctggaccggtcaaaaggacctttgatccatttacttaggcccaatacgatccaaagtccaaacaccacgtttgacaaagttac 19967374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 24973787 - 24973852
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacaca 196  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||  |||||||||| || |||||    
T  24973787 catttacttaggcccaatatcatccaaagcccaaacaccacgttttgcaaaattacttgcgacaca 24973852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 29334282 - 29334214
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| ||||  |||||||||||||| |||||    
T  29334282 tgatctaatgggtaaaatttactttcccatggtgggaaacaactatccattcccatgctaaatgccacc 29334214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 8995313 - 8995395
Alignment:
Q  105 tggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||| |||||||||||| ||| | | ||||||||||| |||||||| ||| |||||| |||||||||| ||||||| ||||||    
T  8995313 tggaccgaccaaaaggacctttggcccatttacttagacccaatactatctaaagcctaaacaccacgtttgacaacattact 8995395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 40028764 - 40028830
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||  ||| |||||||||| |||||    
T  40028764 atctaatggataaaatttactttcctatggtgggaaacaactatccattctcatgctaaatgccacc 40028830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 9859301 - 9859205
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || ||||||||||||| |||| ||| |||||| || ||||| |||||||  |||||||||||| ||| |||| ||||| || ||||||    
T  9859301 gttctggaccggccaaaaggatctttgacttattgacttagacctaatacaatccaaaatccaaacaccacgtttggcaaacttacttgcaacacac 9859205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 43316425 - 43316357
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||| ||||| ||||||| ||||||| |||||||||||||| ||||  |||||||||||||| |||||    
T  43316425 tgatcaaatggataaaatttactttcccatggtgggaaacaactatccattcccatgctaaatgccacc 43316357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 38932109 - 38932176
Alignment:
Q  33 gatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    |||||||||| ||||| | ||||||||||||||| |||||| |  ||||||||||||||||| |||||    
T  38932109 gatctaatggttaaaaatgactttcctatggtggaaaacaacttccttttcccatgctaaatgccacc 38932176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 17721861 - 17721907
Alignment:
Q  264 atgtaacataattgtacatcacaaggtaataatataatcatctctct 310  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||||    
T  17721861 atgtaacctaattgtacatcacaagagaataatataatcatctctct 17721907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 33029095 - 33029027
Alignment:
Q  129 ctcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||| |||||||||| |||||  ||||||||||||||||||||| ||||| | |||||| || ||||||    
T  33029095 ctcaattacttaggcacaatataatccaaagcccaaacaccacgtttgactatattacttgcgacacac 33029027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 11469159 - 11469108
Alignment:
Q  22 gttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaa 73  Q
    ||||||||||| |||||||||  ||||||| |||||| ||||||||||||||    
T  11469159 gttctctaccttatctaatggtcaaaattagctttcccatggtgggaaacaa 11469108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 31788258 - 31788297
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaacaa 73  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  31788258 atctaatggttaaaattaactttcccatggtgggaaacaa 31788297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 47334899 - 47334949
Alignment:
Q  51 aactttcctatggtgggaaacaaatatcttttcccatgctaaattccaccg 101  Q
    ||||||||||||||||||||||| |  |||||||||| |||||| ||||||    
T  47334899 aactttcctatggtgggaaacaactcccttttcccatactaaatgccaccg 47334949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 3789320 - 3789357
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaac 71  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  3789320 atctaatggctaaaatcaactttcctatggtaggaaac 3789357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 2687720 - 2687768
Alignment:
Q  45 aaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    |||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  2687720 aaaaataattttcccatggtgggaaacaattatcctttcccatgctaaa 2687768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 38622102 - 38622062
Alignment:
Q  132 atttacttaggcccaataccatccaaagcccaaacaccacg 172  Q
    ||||||||||||||||||| ||||||||| |||||| ||||    
T  38622102 atttacttaggcccaatacaatccaaagctcaaacatcacg 38622062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 29094886 - 29095000
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| ||||||||| |||||| | | |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| |     
T  29094886 gttctggaccgaccaaaaagatctttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacacccc 29094985  T
Q  201 tcccacacgaggggg 215  Q
    | |||| ||||||||    
T  29094986 ttccacgcgaggggg 29095000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 17756899 - 17757021
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagg 212  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||| ||||||||||||||||| ||| ||||||||||||| |||||| | | |||| |||||    
T  17756899 ccaaaaggatctttgacacatttacttaggcctaatacaatcgaaagcccaaacaccacgtttggcaaaattactcgcgacacaccccttccacgcgagg 17756998  T
Q  213 gggctgcacgaaacaaaagagat 235  Q
    ||| |||||| ||| ||| ||||    
T  17756999 ggggtgcacggaacgaaaaagat 17757021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 23574723 - 23574637
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||| || ||||||||| ||| | | |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  23574723 gttctggaccgcccaaaaggacctttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttgacaaagttact 23574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 27965042 - 27964965
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgc 190  Q
    ||||||||||||| | | ||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||    
T  27965042 ccaaaaggatctttggcccatttacttaggcccaatatcatccaaagcccaaacaccacgtttggtaaaattactcgc 27964965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 21508508 - 21508604
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||||| ||||| ||| ||| | | |||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  21508508 gttctggatcggccaaagggacctttggcccatttacttaggcccaatacaatccaaagctcaaacaccacgtttgacaaagttacttgcaacacac 21508604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 15119591 - 15119676
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||| || ||||||||| ||||| | |||||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  15119591 gttctggaccggccaaaaggaccttggcc-catttacttaggcccaatacaatccagagcccaaacaccacgtttgacaaagttact 15119676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 31023404 - 31023476
Alignment:
Q  238 tgtagttcgatataaatagtgatgacatgtaacataattgtacatcacaaggtaataatataatcatctctct 310  Q
    |||||||| |||||||||| ||| |||||||||||||||||| |||||| |  ||||||||||||||||||||    
T  31023404 tgtagttctatataaatagagatcacatgtaacataattgtatatcacatgaaaataatataatcatctctct 31023476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 18729239 - 18729165
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    ||||||||||||| | | |||||||||||||| ||||| ||||||| ||||||||||||| |||||||| |||||    
T  18729239 ccaaaaggatctttggcccatttacttaggcctaatactatccaaaacccaaacaccacgtttgacaaacttact 18729165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 18736330 - 18736244
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||| || |||||||||| || | | |||||||||||||||||||  ||||||||||||||||||||| ||| |||| |||||    
T  18736330 gttctggaccggccaaaaggatttttggcccatttacttaggcccaataatatccaaagcccaaacaccacgtttggcaaacttact 18736244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 18043607 - 18043522
Alignment:
Q  102 ttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    ||||||| || ||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||| |||| ||| |||| |||||    
T  18043607 ttctggaccggccaaaaggacctttggcccatttacttaggcccaataccattcaaagcccaaacatcacgtttggcaaagttact 18043522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 19857705 - 19857784
Alignment:
Q  102 ttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaa 181  Q
    ||||||| |||||||||||| ||| | | ||||||||||||| |||||| ||||||||| ||||||||||| ||| ||||    
T  19857705 ttctggaccgaccaaaaggacctttggcgcatttacttaggctcaatacaatccaaagctcaaacaccacgtttggcaaa 19857784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 15369493 - 15369595
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| || ||||||||||||| | | |||||||||| ||||||||  ||||||||| ||||||||||| ||| ||| ||| || || |||||| ||    
T  15369493 gttctggaccggccaaaaggatcttaggcgcatttacttaagcccaatataatccaaagctcaaacaccacgtttggcaatattccttgcaacacaccct 15369592  T
Q  201 tcc 203  Q
    |||    
T  15369593 tcc 15369595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 25067849 - 25067891
Alignment:
Q  51 aactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  25067849 aactttcctatggtgggaaacaaatatcctttcccatgctaaa 25067891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 29482909 - 29482825
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||||||| | | |||||||| |||||||| || ||||||||||||||| ||||| ||| ||| |||||| || ||||||    
T  29482909 ccaaaaggatctttggcccatttactcaggcccaacacaatccaaagcccaaacgccacgtttggcaacattacttgcgacacac 29482825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 4409527 - 4409440
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagccc-aaacaccacgattgacaaaattact 187  Q
    ||||| ||||| |||||||||  || | | ||||||||||||||||||| ||| |||||||| |||||||||| |||||||| |||||    
T  4409527 gttctcgatcggccaaaaggacatttggcccatttacttaggcccaatatcattcaaagcccaaaacaccacgtttgacaaagttact 4409440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 18258494 - 18258533
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacacca 170  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  18258494 catttacttaggcccaatacaatccaaagcccaaacacca 18258533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 8306355 - 8306303
Alignment:
Q  135 tacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||||||||||| ||| |||||||||||| |||| |||||||| |||||    
T  8306355 tacttaggcccaatacgatctaaagcccaaacatcacgtttgacaaagttact 8306303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 15349497 - 15349599
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| ||  |||||||||||| | | | ||||||||||||| |||| ||||||||  ||||||||| | ||| ||| |||||| || |||||| ||    
T  15349497 gttctggaccggtcaaaaggatcttaggcccgtttacttaggcccgatacaatccaaagatcaaacaccatgtttggcaatattacttgcaacacaccct 15349596  T
Q  201 tcc 203  Q
    |||    
T  15349597 tcc 15349599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 18290283 - 18290222
Alignment:
Q  32 tgatctaatggctaaaa-ttaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    ||||||||||| ||||| |||||||||| ||||||||||| || || ||||||||||||||||    
T  18290283 tgatctaatggttaaaaattaactttcccatggtgggaaa-aattagcttttcccatgctaaa 18290222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 23524350 - 23524254
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || ||||| ||| ||| | | ||||||||||||  |||||| | ||||||||||||||||||| ||  |||| ||||| || ||||||    
T  23524350 gttctggaccggccaaagggacctttggcccatttacttaggtacaatacaacccaaagcccaaacaccacgttttgcaaagttacttgcgacacac 23524254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 18153458 - 18153325
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| || ||||||||||||| | | ||||||||||||||||||||  | |||||||||||||||| | ||| ||||||||||||| |||||| |     
T  18153458 gttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactacaaagcccaaacaccatgtttggcaaaattactcgcgacacacccc 18153359  T
Q  201 tcccacacgagggggctgcacgaaacaaaagaga 234  Q
    | |||| |||||||| |||||| |||||||||||    
T  18153358 ttccacgcgaggggggtgcacggaacaaaagaga 18153325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 32548639 - 32548724
Alignment:
Q  18 tatagttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccaccgtt 103  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||| |||||||| |||||  ||||||||    
T  32548639 tatagttctctacttgatctaatggctaacattaactttcccatggtgggaaacaagtatcatttcccatactaaaccccaccgtt 32548724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 47295552 - 47295666
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    ||||| ||| ||||||||||||||| ||| |||||||||||| |||||||  | |||||||||||||||||| |||  |||||||||||| |||||| |     
T  47295552 gttcttgattgaccaaaaggatctttgacccatttacttaggtccaatacactacaaagcccaaacaccacgtttggaaaaattactcgcgacacaccca 47295651  T
Q  201 tcccacacgaggggg 215  Q
    | |||| ||||||||    
T  47295652 ttccacgcgaggggg 47295666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 32547785 - 32547710
Alignment:
Q  18 tatagttctctacctgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||  ||| ||||||||||||||    
T  32547785 tatagttctctatttgatctaatggctaacattaactttcctatggtggaaaacaagaatcctttcccatgctaaa 32547710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 20093865 - 20093779
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||| |||| ||||||||||||| ||| |||||||||||| ||||||| |||||||| |||||||||||| ||| |||| |||||    
T  20093865 gttctgaatcggccaaaaggatctttgacccatttacttaggtccaatacaatccaaagtccaaacaccacgtttgtcaaagttact 20093779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 21592745 - 21592859
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| || ||||||| ||||| | | |||| |||||||||||||||||||||||| |||||||||| | ||| | ||||||||||| |||||| |     
T  21592745 gttctggaccggccaaaagaatctttggcccattcacttaggcccaataccatccaaagtccaaacaccatgtttggctaaattactcgcgacacacccc 21592844  T
Q  201 tcccacacgaggggg 215  Q
    | |||| ||||||||    
T  21592845 ttccacgcgaggggg 21592859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 30770058 - 30770172
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| || ||||||||| ||| ||  |||||||||||||||||||| || ||||||||||||| |||| ||||| || ||||| || |||||| |     
T  30770058 gttctggaccggccaaaaggacctttgaaccatttacttaggcccaatacaattcaaagcccaaacatcacgtttgacgaagttacttgcgacacacccc 30770157  T
Q  201 tcccacacgaggggg 215  Q
    | |||||| ||||||    
T  30770158 ttccacacaaggggg 30770172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 21801716 - 21801813
Alignment:
Q  102 ttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactc 199  Q
    ||||||| || ||||||||||||| | | |||||||||||||||||||| ||| ||| ||||||||||||| |||  ||| ||||| || ||||||||    
T  21801716 ttctggaccggccaaaaggatctttggcccatttacttaggcccaatactatctaaaacccaaacaccacgtttggaaaacttacttgcaacacactc 21801813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 38612874 - 38612801
Alignment:
Q  114 caaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||| ||| ||| ||||||||||||| |||||| || |||||||||||||||||| ||| ||| ||||||    
T  38612874 caaaaggagctttgacccatttacttaggctcaatactattcaaagcccaaacaccacgtttggcaacattact 38612801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 22705915 - 22705833
Alignment:
Q  114 caaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||  || ||| |||||||||||||||||||| |||||||| || ||||||||| |||||||| ||||| || ||||||    
T  22705915 caaaaggacatttgacccatttacttaggcccaatacaatccaaagtcc-aacaccacgtttgacaaagttacttgcaacacac 22705833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 29165148 - 29165092
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||| ||||||||||||| | ||||||||||||||||||| ||| |||| |||||    
T  29165148 catttatttaggcccaatacaacccaaagcccaaacaccacgtttggcaaagttact 29165092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 7595670 - 7595587
Alignment:
Q  114 caaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||||||| | | |||||||| ||||||||||| || ||||||  |||||||||| ||| |||| ||||| || ||||||    
T  7595670 caaaaggatctttggcccatttactcaggcccaatacaattcaaagcttaaacaccacgcttggcaaacttacttgcaacacac 7595587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 9548829 - 9548900
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacg 172  Q
    |||||||| || |||||||||| || | | ||||||| ||| |||||||| ||||||||||||||| |||||    
T  9548829 gttctggaccggccaaaaggatgtttggcccatttacgtagtcccaatacaatccaaagcccaaacgccacg 9548900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 21802752 - 21802694
Alignment:
Q  129 ctcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||||||||||| ||||| ||| ||||| ||||||||||| ||| |||| |||||    
T  21802752 ctcatttacttaggccgaatacaatctaaagctcaaacaccacgtttgtcaaagttact 21802694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 30915802 - 30915761
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaa 73  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||    
T  30915802 tgatctaatgggtaaaatttactttcccatggtgggaaacaa 30915761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 30402833 - 30402901
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||||||| ||||||| ||||||| ||||||| ||| || ||||  ||| |||||||||| |||||    
T  30402833 tgatctaatgggtaaaatttactttcccatggtggaaaataactatccattctcatgctaaatgccacc 30402901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 40258734 - 40258782
Alignment:
Q  52 actttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||| |||||| ||||||| |||| |||||||||||||| ||||||    
T  40258734 actttcccatggtgagaaacaattatcatttcccatgctaaactccacc 40258782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 40635520 - 40635594
Alignment:
Q  114 caaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgc 190  Q
    |||||||||||| | | |||| |||||| ||||||| ||||||||| | |||||||||| ||| |||||||||||||    
T  40635520 caaaaggatctttgcc-cattcacttagacccaatatcatccaaagtc-aaacaccacgtttggcaaaattactcgc 40635594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 46251456 - 46251420
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaa 70  Q
    |||||||||||||||| |||||||| |||||||||||    
T  46251456 atctaatggctaaaatcaactttcccatggtgggaaa 46251420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 17383 - 17250
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactct 200  Q
    |||||||| || ||||||| ||||| | | |||| ||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||  |||||| |     
T  17383 gttctggaccggccaaaagaatctttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacacccc 17284  T
Q  201 tcccacacgagggggctgcacgaaacaaaagaga 234  Q
    | |||| |||||||| |||||| ||| |||||||    
T  17283 ttccacgcgaggggggtgcacggaacgaaagaga 17250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 15204 - 15111
Alignment:
Q  104 ctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||| || ||||||||||||| | | |||| ||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  15204 ctggaccggccaaaaggatctttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattactcgcgacacac 15111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 33273396 - 33273493
Alignment:
Q  105 tggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttc 202  Q
    |||| |||||||||||||||| | | |||||||||||||| ||||| ||||||||||||||||||||| ||| |||| ||||| || |||||||||||    
T  33273396 tggaccgaccaaaaggatctttggcccatttacttaggcctaatactatccaaagcccaaacaccacgtttggcaaatttacttgcaacacactcttc 33273493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 11709709 - 11709614
Alignment:
Q  102 ttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||| || ||||||||||||| | | |||||||||||||||||||| |||||||||||||| |||||| ||||||| |||||| || ||||||    
T  11709709 ttctggaccggccaaaaggatctttggcccatttacttaggcccaatacaatccaaagcccaaataccacgtttgacaatattacttgcgacacac 11709614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 22609364 - 22609447
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaatta 185  Q
    |||||||| |||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||    
T  22609364 gttctggaccgaccaaaaggatctttgatccatttacttaggcccaata-catccaaagcccaaacaccatgtttgacaacatta 22609447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 32008883 - 32008970
Alignment:
Q  100 cgttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    ||||||||| || ||||||||| ||| ||| ||| |||||||||||||||| ||| ||||||||||||||||| |||||||| |||||    
T  32008883 cgttctggaccggccaaaaggacctttgacccatatacttaggcccaatacaatcgaaagcccaaacaccacgtttgacaaagttact 32008970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 25821046 - 25820957
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgc 190  Q
    |||||||| || ||||||||||||| | |  ||||| || |||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  25821046 gttctggaccggccaaaaggatctttggccaatttatttgggccgaataccatccaaagcccaaacaccacgtttggcaaaattactcgc 25820957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 37562362 - 37562292
Alignment:
Q  33 gatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccaccgtt 103  Q
    |||||||||| ||||||| |||||||||||||||||||||| | || ||||||||||||||  ||||||||    
T  37562362 gatctaatggttaaaattgactttcctatggtgggaaacaattctcctttcccatgctaaaccccaccgtt 37562292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 7454522 - 7454618
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || ||||||||||||| | |  |||||||||||||||| || ||||||||||||||| ||||| ||| |||| ||||| || ||||||    
T  7454522 gttctggaccggccaaaaggatctttggcctatttacttaggcccaacacaatccaaagcccaaactccacgtttggcaaacttacttgcaacacac 7454618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 41280678 - 41280774
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| ||  |||||||| ||| ||| ||||||||||||||||| || ||||||||||||||||||| | ||| ||| |||||| || ||||||    
T  41280678 gttctggaccggacaaaaggacctttgacccatttacttaggcccaacacaatccaaagcccaaacaccatgtttggcaacattacttgcgacacac 41280774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 13935034 - 13935101
Alignment:
Q  33 gatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    |||||||||| ||||| | ||||||||||||||| |||||| | || ||||||||||||||| |||||    
T  13935034 gatctaatggttaaaagtgactttcctatggtggaaaacaactttcctttcccatgctaaatgccacc 13935101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 18573917 - 18574020
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagggggctgcacgaaacaaaa 230  Q
    |||||||||||||| ||||| || |||||||||||||||||| ||| |||| ||||| || |||||  | | |||||| |||||| |||| | | |||||    
T  18573917 catttacttaggcctaatacaatgcaaagcccaaacaccacgtttggcaaagttacttgcgacacatcccttccacacaaggggggtgcatggagcaaaa 18574016  T
Q  231 gaga 234  Q
    ||||    
T  18574017 gaga 18574020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 7999978 - 7999882
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || |||||||||  || | | |||||||||||||||||||| ||||| | ||| |||||| || ||| |||||||||| || ||||||    
T  7999978 gttctggaccggccaaaaggacatttggcccatttacttaggcccaatacaatccacaacccgaacaccgcgtttggcaaaattacttgcgacacac 7999882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 17775919 - 17775835
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgaggggg 215  Q
    ||||||| |||| ||||||| |||||||||||||||| |||| ||| |||| ||||| || |||||| | | |||||| ||||||    
T  17775919 catttacctaggtccaatacaatccaaagcccaaacatcacgtttggcaaagttacttgcgacacaccccttccacacaaggggg 17775835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 10532640 - 10532690
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaa 181  Q
    ||||||||||||||||||||||| |||||| ||||| ||||| ||| ||||    
T  10532640 catttacttaggcccaataccattcaaagctcaaacgccacgtttggcaaa 10532690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 18040358 - 18040426
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacacca 170  Q
    |||||||| || ||||||||| ||| | | |||||||||||| ||||||  |||||||||||||||||||    
T  18040358 gttctggaccggccaaaaggacctttggcccatttacttagg-ccaatataatccaaagcccaaacacca 18040426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 40450966 - 40451007
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaa 73  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||    
T  40450966 tgatctaatggttaaaatttactttcccatggtgggaaacaa 40451007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 27347498 - 27347402
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| ||  |||||||||||| | | |||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||    
T  27347498 gttctggaccggtcaaaaggatctttggcccatttacttaagcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacac 27347402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 3770590 - 3770494
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || ||||||||| ||| | | |||||||||||||||||||| || |||||||||||||||||| ||| |||| ||||| || ||||||    
T  3770590 gttctggaccggccaaaaggacctttggcccatttacttaggcccaatacaattcaaagcccaaacaccacgtttggcaaagttacttgcaacacac 3770494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 23932997 - 23932913
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||||||| | | |||||||||||||| ||||| |||||||||||||||||||||  |||||| |||||| || ||||||    
T  23932997 ccaaaaggatctttggcccatttacttaggcctaatacaatccaaagcccaaacaccacgtctgacaacattacttgcgacacac 23932913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 25133806 - 25133890
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||| |||||| ||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||| ||||| || ||||||    
T  25133806 ccaaaaagatctttgacccatttacttaggcccattacaatccaaagcccaaacaccacgtttggcaaagttacttgcgacacac 25133890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 3105504 - 3105438
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||| |||||| || ||||||    
T  3105504 catttacttaggcccaacacaatccaaagcccaaacaccacgtttgacaacattacttgcgacacac 3105438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 23755688 - 23755757
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacacca 170  Q
    |||||||| || ||||||||| ||| | | ||||||| |||||||||||| |||||||||||||||||||    
T  23755688 gttctggaccggccaaaaggacctttggcccatttacctaggcccaatacaatccaaagcccaaacacca 23755757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 34617719 - 34617660
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    |||||||||  |||| ||||||||| |||||||||||||| |||| ||||||||||||||    
T  34617719 atctaatggtcaaaaataactttcccatggtgggaaacaattatcctttcccatgctaaa 34617660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 41266066 - 41266152
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||| ||  ||||||||| || ||| |||||||||||||||||||| |||||||  |||||||||| | ||| |||| |||||    
T  41266066 gttctggaccggtcaaaaggattttagacccatttacttaggcccaatacgatccaaaatccaaacaccatgtttggcaaagttact 41266152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 36391025 - 36390964
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaa 93  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| |  | ||||||||||||||    
T  36391025 tgatctaatggttaaaatttactttcccatggtgggaaacaacttccctttcccatgctaaa 36390964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 36719007 - 36719070
Alignment:
Q  37 taatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    |||||| |||||||| |||||||||||| |||||||| | || |||||||| |||||| |||||    
T  36719007 taatggttaaaattagctttcctatggtaggaaacaagtttcctttcccatactaaatgccacc 36719070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 19093050 - 19092981
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacacca 170  Q
    |||||||||||  ||||||||  || ||  |||||||||||||||||||  || ||||||||||||||||    
T  19093050 gttctggatcggacaaaaggagatttgatccatttacttaggcccaatattattcaaagcccaaacacca 19092981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 26021074 - 26021037
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaac 71  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  26021074 atctaatggctaaaatcaactttcctatggtaggaaac 26021037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 26159097 - 26159158
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagccc 162  Q
    |||||||| || |||||||||  || | |||||||||||||||||||||| || ||||||||    
T  26159097 gttctggaccggccaaaaggacttttggctcatttacttaggcccaatacaattcaaagccc 26159158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 7868121 - 7868189
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||| ||| ||||||| ||||||| |||||||||||||| |  | |||| |||||||||| |||||    
T  7868121 tgatctagtggttaaaatttactttcccatggtgggaaacaactcccctttctcatgctaaatcccacc 7868189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 44406939 - 44407007
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| ||||| |||||||||||||| |||||    
T  44406939 tgatctaatgggtaaaatttactttcccatggtgggaaacaactatctattcccatgctaaatgccacc 44407007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 51420928 - 51420858
Alignment:
Q  33 gatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccaccgtt 103  Q
    |||||||||| ||||| | ||||||||||||||| |||||| |  ||||||||||||||||| ||||||||    
T  51420928 gatctaatggttaaaaatgactttcctatggtggaaaacaacttccttttcccatgctaaatgccaccgtt 51420858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 19790593 - 19790537
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacacc 169  Q
    ||||||||||| | | | |||||||||||||||||||||||||||| ||||||||||    
T  19790593 ccaaaaggatcattggcccatttacttaggcccaataccatccaaaacccaaacacc 19790537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 22915352 - 22915284
Alignment:
Q  129 ctcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||||||||||||||||| |||  |||| ||||||||||| |||||||  ||||| || ||||||    
T  22915352 ctcatttacttaggcccaatacaatctgaagcgcaaacaccacgtttgacaagtttacttgcaacacac 22915284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 50305686 - 50305649
Alignment:
Q  34 atctaatggctaaaattaactttcctatggtgggaaac 71  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  50305686 atctaatggctaaaatcaactttcctatggtaggaaac 50305649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 35458901 - 35458853
Alignment:
Q  46 aaattaactttcctatggtgggaaacaaatatcttttcccatgctaaat 94  Q
    ||||| |||||||||||||||||||||| ||||  ||||||| ||||||    
T  35458901 aaatttactttcctatggtgggaaacaactatccattcccattctaaat 35458853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 47481221 - 47481289
Alignment:
Q  32 tgatctaatggctaaaattaactttcctatggtgggaaacaaatatcttttcccatgctaaattccacc 100  Q
    ||||||||||| ||||||| ||||| ||||||| | |||||| ||||  ||| |||||||||| |||||    
T  47481221 tgatctaatggataaaatttacttttctatggtagaaaacaactatccattctcatgctaaatgccacc 47481289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 7233 - 7333
Alignment:
Q  115 aaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacactcttcccacacgagggg 214  Q
    ||||||||||| | | |||||| ||| | |||||| |||||||||||||||||||| | ||| ||||||||||||| |||||| |   ||||||||||||    
T  7233 aaaaggatctttggcccatttatttatgtccaatatcatccaaagcccaaacaccaagtttggcaaaattactcgcgacacaccccctccacacgagggg 7332  T
Q  215 g 215  Q
    |    
T  7333 g 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 56229 - 56324
Alignment:
Q  102 ttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||  ||| ||||||| ||| | | |||||||||||||||||||| ||||||||||||||||||||| ||| | || ||||| || ||||||    
T  56229 ttctggactgacaaaaaggacctttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcgaagttacttgcgacacac 56324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 151164 - 151247
Alignment:
Q  104 ctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    ||||| || ||||||||||||| | | |||||||||||||| ||||| ||||||||||||||||| ||| ||| |||| |||||    
T  151164 ctggaccggccaaaaggatctttggcccatttacttaggcctaatacaatccaaagcccaaacactacgtttggcaaacttact 151247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 4066 - 4152
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||| || |||||||||| || | |||||||||||||| | ||||| |||||||| |||||||||||| ||| |||| |||||    
T  4066 gttctggaccggccaaaaggatatttggctcatttacttaggtcaaatacaatccaaagtccaaacaccacgtttggcaaacttact 4152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 391790 - 391694
Alignment:
Q  101 gttctggatcgaccaaaaggatct-tggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| |||||||||||| || ||| | |||||||||||| ||||||| ||||||| ||||||||||||| ||| |||| ||||| || ||||||    
T  391790 gttctggaccgaccaaaaggacctgtggtc-catttacttaggtccaatacaatccaaaccccaaacaccacggttggcaaacttacttgcaacacac 391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 381061 - 381005
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattact 187  Q
    |||||||||| ||||||||| ||||||||||||||||||| | ||| |||| |||||    
T  381061 catttacttacgcccaatacaatccaaagcccaaacaccatggttggcaaacttact 381005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 2073 - 1977
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || |||||||||  || | | ||||||||| || ||||||| || |||||||||||||||||| ||| |||||||||| || ||||||    
T  2073 gttctggaccggccaaaaggagttttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacac 1977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 12650 - 12554
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    |||||||| || ||||||||| ||| | | |||||||||||||| ||||| || |||||||||||||||||| ||  ||| |||||| || ||||||    
T  12650 gttctggaccggccaaaaggagctttggcccatttacttaggcctaatacaattcaaagcccaaacaccacgttttgcaacattacttgcgacacac 12554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 54474 - 54562
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcg 189  Q
    |||||||| || ||||||||||||| | | ||||||||||| ||||||||  | |||||||||||  ||||| ||| ||||||||||||    
T  54474 gttctggaccggccaaaaggatctttggcccatttacttagacccaatacactacaaagcccaaaatccacgtttggcaaaattactcg 54562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 242991 - 242907
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||| ||| | | |||||||||||||||||||| ||| ||||||||||||||| | ||| ||| |||||| || ||||||    
T  242991 ccaaaaggacctttgtcccatttacttaggcccaatacaatctaaagcccaaacaccaagtttggcaacattacttgcgacacac 242907  T

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Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 253613 - 253558
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattac 186  Q
    ||||| |||||||||||||| ||||||| ||||||||||||| ||| ||| |||||    
T  253613 cattttcttaggcccaatacaatccaaatcccaaacaccacgtttggcaacattac 253558  T

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Target: scaffold0280 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 910 - 981
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacg 172  Q
    |||||||| ||  |||||||| ||| | | |||||||||||| ||||||| |||||||||||||||||||||    
T  910 gttctggaccggtcaaaaggacctttggcccatttacttaggtccaatacaatccaaagcccaaacaccacg 981  T

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Target: scaffold0483 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 9430 - 9364
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||| || ||||||| || |||||||||||||||||| ||| |||||||||| || ||||||    
T  9430 catttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacac 9364  T

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Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 29927 - 30012
Alignment:
Q  101 gttctggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattac 186  Q
    |||||||| || ||||||||| ||| | | |||||| |||||||||| || |||||||||||||||| |||| ||| |||| ||||    
T  29927 gttctggaccggccaaaaggacctttggcccatttaattaggcccaacacaatccaaagcccaaacagcacgtttggcaaagttac 30012  T

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Target: scaffold0042 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 68991 - 68907
Alignment:
Q  113 ccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||||||| | | |||||||||||||||||||| || ||||||||| || ||||| ||  ||| |||||| || ||||||    
T  68991 ccaaaaggatctttggcccatttacttaggcccaatacaattcaaagcccagactccacgttttgcaacattacttgcgacacac 68907  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 36664 - 36745
Alignment:
Q  115 aaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacaccacgattgacaaaattactcgccacacac 197  Q
    ||||||||||| | | ||||| |||||| ||||||| |||| ||||||||| |||||| ||| ||| ||||||||| ||||||    
T  36664 aaaaggatcttagtcccattttcttaggtccaatacaatcc-aagcccaaataccacgtttggcaacattactcgcaacacac 36745  T

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Target: scaffold0170 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 16216 - 16253
Alignment:
Q  131 catttacttaggcccaataccatccaaagcccaaacac 168  Q
    |||||||||||||||||||| | |||||||||||||||    
T  16216 catttacttaggcccaatacaacccaaagcccaaacac 16253  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 2702 - 2767
Alignment:
Q  105 tggatcgaccaaaaggatcttggactcatttacttaggcccaataccatccaaagcccaaacacca 170  Q
    |||| |||||||||||| ||| | | ||||||| |||||| ||||| || ||||||||||||||||    
T  2702 tggaccgaccaaaaggagctttggcccatttacataggcctaatacaattcaaagcccaaacacca 2767  T

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