View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3235_low_5 (Length: 285)

Name: NF3235_low_5
Description: NF3235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3235_low_5
NF3235_low_5
[»] chr5 (43 HSPs)
chr5 (179-285)||(8215935-8216041)
chr5 (179-285)||(11000728-11000834)
chr5 (179-285)||(14717640-14717746)
chr5 (179-285)||(38964114-38964220)
chr5 (179-285)||(6252007-6252113)
chr5 (179-285)||(6600136-6600242)
chr5 (179-285)||(39002025-39002131)
chr5 (179-285)||(3352002-3352108)
chr5 (179-285)||(6739955-6740061)
chr5 (179-285)||(14952359-14952465)
chr5 (179-285)||(16095960-16096065)
chr5 (179-285)||(27457197-27457303)
chr5 (179-285)||(30297749-30297855)
chr5 (179-285)||(33760470-33760576)
chr5 (179-285)||(35342215-35342321)
chr5 (180-285)||(30863288-30863393)
chr5 (180-285)||(41282377-41282482)
chr5 (179-283)||(28078405-28078509)
chr5 (179-281)||(1052572-1052674)
chr5 (179-285)||(4015874-4015980)
chr5 (179-285)||(8689607-8689713)
chr5 (179-285)||(11692147-11692253)
chr5 (179-285)||(20408568-20408674)
chr5 (179-285)||(23128913-23129019)
chr5 (179-281)||(26593280-26593382)
chr5 (179-285)||(31710317-31710423)
chr5 (179-285)||(42993553-42993659)
chr5 (179-285)||(19659501-19659607)
chr5 (179-285)||(20079258-20079364)
chr5 (179-285)||(27116099-27116205)
chr5 (179-285)||(39824591-39824697)
chr5 (179-285)||(40074985-40075091)
chr5 (179-285)||(43166269-43166375)
chr5 (179-285)||(19398193-19398299)
chr5 (179-281)||(30208402-30208504)
chr5 (200-285)||(16752151-16752236)
chr5 (179-282)||(11935484-11935586)
chr5 (200-285)||(26035367-26035452)
chr5 (218-285)||(6331412-6331479)
chr5 (179-285)||(8694901-8695007)
chr5 (200-284)||(444990-445074)
chr5 (179-253)||(27510038-27510112)
chr5 (179-223)||(6332873-6332917)
[»] chr8 (39 HSPs)
chr8 (179-285)||(260012-260118)
chr8 (179-285)||(513342-513448)
chr8 (179-285)||(655803-655909)
chr8 (179-285)||(841538-841644)
chr8 (179-285)||(15847147-15847253)
chr8 (179-285)||(37933677-37933783)
chr8 (179-281)||(38107138-38107240)
chr8 (179-285)||(35884430-35884536)
chr8 (179-283)||(35443348-35443452)
chr8 (179-281)||(440879-440981)
chr8 (179-285)||(2533307-2533413)
chr8 (179-285)||(23972295-23972401)
chr8 (179-285)||(43806533-43806639)
chr8 (179-285)||(22683988-22684094)
chr8 (179-285)||(36400070-36400176)
chr8 (179-285)||(38208788-38208894)
chr8 (179-285)||(41536527-41536633)
chr8 (179-285)||(3875943-3876049)
chr8 (179-285)||(1293521-1293627)
chr8 (179-285)||(28707446-28707552)
chr8 (179-285)||(38633710-38633816)
chr8 (179-285)||(9056338-9056444)
chr8 (179-285)||(28496355-28496460)
chr8 (179-285)||(33651876-33651982)
chr8 (200-285)||(7434921-7435006)
chr8 (179-285)||(12010584-12010693)
chr8 (179-285)||(13797124-13797229)
chr8 (179-281)||(40301893-40301995)
chr8 (200-285)||(23935268-23935353)
chr8 (184-285)||(39513344-39513445)
chr8 (179-285)||(4649185-4649291)
chr8 (179-285)||(24430571-24430677)
chr8 (200-285)||(29485321-29485406)
chr8 (179-285)||(42988227-42988332)
chr8 (179-282)||(36218781-36218883)
chr8 (180-240)||(24193131-24193191)
chr8 (200-285)||(6016240-6016325)
chr8 (242-285)||(24193356-24193398)
chr8 (184-218)||(8137240-8137274)
[»] chr7 (43 HSPs)
chr7 (179-285)||(11476556-11476662)
chr7 (179-285)||(1469493-1469599)
chr7 (179-285)||(2960640-2960746)
chr7 (179-285)||(30798368-30798474)
chr7 (179-285)||(41113412-41113518)
chr7 (179-285)||(47281124-47281230)
chr7 (179-284)||(221311-221416)
chr7 (180-285)||(44544444-44544549)
chr7 (179-283)||(35600122-35600226)
chr7 (179-285)||(23842340-23842446)
chr7 (179-285)||(31684134-31684240)
chr7 (180-282)||(33884357-33884459)
chr7 (179-285)||(38427563-38427669)
chr7 (179-285)||(47272016-47272122)
chr7 (180-285)||(47219180-47219285)
chr7 (179-285)||(8162712-8162818)
chr7 (179-285)||(30876294-30876400)
chr7 (179-285)||(40851309-40851415)
chr7 (179-285)||(47294291-47294397)
chr7 (179-285)||(11050261-11050367)
chr7 (179-285)||(37393998-37394104)
chr7 (179-285)||(43752776-43752882)
chr7 (179-281)||(48628844-48628946)
chr7 (184-285)||(4923251-4923352)
chr7 (180-285)||(29248377-29248482)
chr7 (179-285)||(27364339-27364445)
chr7 (179-285)||(30971941-30972047)
chr7 (179-285)||(7336095-7336200)
chr7 (26-104)||(42889066-42889144)
chr7 (179-285)||(43968259-43968365)
chr7 (179-285)||(45723491-45723597)
chr7 (200-285)||(3797544-3797629)
chr7 (179-285)||(41139408-41139518)
chr7 (179-283)||(47120028-47120134)
chr7 (179-285)||(42979338-42979444)
chr7 (179-285)||(44800410-44800516)
chr7 (179-281)||(47579086-47579189)
chr7 (179-285)||(18353179-18353285)
chr7 (200-285)||(37354284-37354369)
chr7 (200-279)||(27774149-27774228)
chr7 (179-232)||(42888937-42888990)
chr7 (227-285)||(40520953-40521011)
chr7 (179-235)||(5106127-5106182)
[»] chr6 (29 HSPs)
chr6 (179-285)||(3408224-3408330)
chr6 (179-285)||(8178249-8178355)
chr6 (179-285)||(29050307-29050413)
chr6 (179-285)||(10256272-10256378)
chr6 (179-285)||(30379052-30379158)
chr6 (180-285)||(6503753-6503858)
chr6 (179-281)||(1915343-1915445)
chr6 (179-285)||(2707494-2707600)
chr6 (179-285)||(12626671-12626777)
chr6 (179-285)||(17428272-17428378)
chr6 (179-285)||(17943071-17943177)
chr6 (179-285)||(11133908-11134015)
chr6 (179-285)||(2390300-2390406)
chr6 (179-281)||(2598099-2598201)
chr6 (179-285)||(9382554-9382660)
chr6 (179-285)||(26393009-26393115)
chr6 (179-281)||(1077276-1077378)
chr6 (179-285)||(3258807-3258913)
chr6 (198-285)||(35223918-35224005)
chr6 (179-285)||(26230932-26231038)
chr6 (179-285)||(6785101-6785204)
chr6 (179-266)||(31375971-31376058)
chr6 (179-285)||(16193345-16193451)
chr6 (180-285)||(25820550-25820655)
chr6 (200-285)||(26936642-26936727)
chr6 (179-285)||(10931148-10931253)
chr6 (179-281)||(26196321-26196423)
chr6 (179-237)||(12612971-12613029)
chr6 (179-258)||(12612848-12612927)
[»] chr4 (53 HSPs)
chr4 (179-285)||(26017458-26017564)
chr4 (179-285)||(31591110-31591216)
chr4 (179-281)||(12196508-12196610)
chr4 (179-285)||(23135006-23135112)
chr4 (179-285)||(24458631-24458737)
chr4 (179-285)||(35930074-35930180)
chr4 (179-285)||(42273837-42273943)
chr4 (181-285)||(10588615-10588719)
chr4 (179-285)||(5227425-5227531)
chr4 (179-285)||(17847096-17847202)
chr4 (179-285)||(28264678-28264784)
chr4 (179-285)||(31208779-31208885)
chr4 (179-285)||(31973626-31973732)
chr4 (179-285)||(33807780-33807886)
chr4 (179-285)||(49118646-49118752)
chr4 (179-285)||(55517185-55517291)
chr4 (180-285)||(33174021-33174126)
chr4 (180-285)||(40988668-40988773)
chr4 (179-284)||(50276138-50276243)
chr4 (179-285)||(4544985-4545091)
chr4 (179-285)||(11795154-11795260)
chr4 (179-285)||(14564831-14564937)
chr4 (179-285)||(28159953-28160059)
chr4 (179-285)||(28812287-28812392)
chr4 (179-285)||(48707733-48707839)
chr4 (180-285)||(37381881-37381986)
chr4 (179-285)||(8882013-8882119)
chr4 (179-285)||(19496102-19496208)
chr4 (179-285)||(30141108-30141214)
chr4 (179-285)||(30467003-30467109)
chr4 (179-285)||(32317988-32318094)
chr4 (179-281)||(33693333-33693435)
chr4 (179-285)||(44490354-44490460)
chr4 (179-285)||(48551764-48551870)
chr4 (179-281)||(50542354-50542456)
chr4 (179-285)||(51371047-51371153)
chr4 (180-281)||(32118753-32118854)
chr4 (179-285)||(9339123-9339232)
chr4 (179-277)||(2055321-2055419)
chr4 (179-285)||(39700080-39700186)
chr4 (179-281)||(39995167-39995269)
chr4 (179-281)||(48149538-48149640)
chr4 (179-279)||(15985051-15985151)
chr4 (200-279)||(24623189-24623268)
chr4 (179-285)||(22298553-22298659)
chr4 (179-285)||(23553100-23553205)
chr4 (179-285)||(25730275-25730381)
chr4 (179-285)||(25734223-25734329)
chr4 (179-285)||(17993017-17993123)
chr4 (179-260)||(20534225-20534306)
chr4 (200-285)||(19168816-19168901)
chr4 (200-279)||(42549643-42549722)
chr4 (242-285)||(56555203-56555246)
[»] chr3 (54 HSPs)
chr3 (179-285)||(38446511-38446617)
chr3 (179-285)||(1687686-1687792)
chr3 (179-285)||(21656553-21656659)
chr3 (179-285)||(31122697-31122803)
chr3 (179-285)||(35346471-35346577)
chr3 (179-285)||(1017079-1017185)
chr3 (179-285)||(20086314-20086420)
chr3 (179-285)||(20760071-20760177)
chr3 (179-285)||(20813441-20813547)
chr3 (179-285)||(21564531-21564637)
chr3 (179-285)||(27070739-27070845)
chr3 (179-285)||(33151731-33151837)
chr3 (179-285)||(41250921-41251027)
chr3 (179-285)||(42016908-42017014)
chr3 (179-285)||(47329175-47329281)
chr3 (179-283)||(40922165-40922269)
chr3 (179-285)||(26455617-26455723)
chr3 (179-285)||(32650820-32650926)
chr3 (179-285)||(37247991-37248097)
chr3 (179-281)||(44798306-44798408)
chr3 (179-285)||(50287601-50287707)
chr3 (179-285)||(21890205-21890311)
chr3 (179-285)||(36314972-36315078)
chr3 (179-285)||(42107099-42107205)
chr3 (185-285)||(22852031-22852131)
chr3 (179-283)||(53196051-53196155)
chr3 (179-285)||(3697181-3697287)
chr3 (187-285)||(12748426-12748524)
chr3 (179-285)||(20913754-20913860)
chr3 (179-285)||(20921872-20921978)
chr3 (179-281)||(48651287-48651389)
chr3 (179-285)||(51562197-51562303)
chr3 (184-285)||(19664576-19664677)
chr3 (179-285)||(10618480-10618586)
chr3 (179-285)||(35608131-35608237)
chr3 (179-285)||(53925979-53926085)
chr3 (179-285)||(55164115-55164221)
chr3 (180-281)||(29677515-29677616)
chr3 (179-285)||(39069761-39069867)
chr3 (179-285)||(52821049-52821155)
chr3 (200-285)||(50977899-50977984)
chr3 (200-285)||(51081031-51081116)
chr3 (179-285)||(1448735-1448838)
chr3 (211-285)||(19268556-19268630)
chr3 (179-285)||(33473239-33473345)
chr3 (200-285)||(51475267-51475352)
chr3 (179-285)||(45380260-45380366)
chr3 (200-279)||(50364908-50364987)
chr3 (200-279)||(34019501-34019580)
chr3 (200-279)||(42641199-42641278)
chr3 (179-281)||(38923998-38924100)
chr3 (207-285)||(28699720-28699798)
chr3 (243-281)||(44152739-44152777)
chr3 (179-221)||(44152772-44152814)
[»] chr2 (42 HSPs)
chr2 (179-285)||(16246193-16246299)
chr2 (179-285)||(33865267-33865373)
chr2 (179-285)||(921057-921163)
chr2 (179-285)||(27328619-27328725)
chr2 (179-285)||(28650426-28650532)
chr2 (180-285)||(17134264-17134369)
chr2 (185-285)||(771981-772081)
chr2 (179-282)||(9276612-9276715)
chr2 (179-285)||(2056961-2057067)
chr2 (179-285)||(2314975-2315081)
chr2 (179-285)||(37838332-37838438)
chr2 (179-285)||(40854644-40854750)
chr2 (179-285)||(41500502-41500608)
chr2 (179-284)||(7378999-7379104)
chr2 (179-285)||(11949426-11949532)
chr2 (179-285)||(19180457-19180562)
chr2 (179-285)||(33106969-33107075)
chr2 (179-285)||(34253177-34253283)
chr2 (179-285)||(37732193-37732299)
chr2 (180-285)||(36444229-36444334)
chr2 (186-285)||(3430631-3430730)
chr2 (179-285)||(1106559-1106665)
chr2 (179-285)||(2456045-2456151)
chr2 (179-285)||(7297234-7297340)
chr2 (179-285)||(8899717-8899822)
chr2 (179-285)||(17484550-17484656)
chr2 (179-285)||(2094410-2094516)
chr2 (179-285)||(12759750-12759855)
chr2 (179-285)||(25087796-25087902)
chr2 (179-271)||(14630663-14630755)
chr2 (179-285)||(42629997-42630103)
chr2 (179-285)||(43249412-43249518)
chr2 (184-285)||(36211081-36211182)
chr2 (180-281)||(38751087-38751188)
chr2 (179-269)||(23671811-23671901)
chr2 (179-285)||(29737783-29737889)
chr2 (179-281)||(45124158-45124260)
chr2 (200-285)||(8396572-8396657)
chr2 (204-285)||(37654143-37654224)
chr2 (200-276)||(19916008-19916084)
chr2 (219-285)||(41178059-41178125)
chr2 (179-282)||(9331794-9331897)
[»] chr1 (59 HSPs)
chr1 (179-285)||(23767414-23767520)
chr1 (179-285)||(49094711-49094817)
chr1 (179-285)||(7553016-7553122)
chr1 (179-285)||(12143107-12143213)
chr1 (179-285)||(19315675-19315781)
chr1 (179-285)||(41106051-41106157)
chr1 (179-285)||(46825566-46825672)
chr1 (180-285)||(19274594-19274699)
chr1 (179-284)||(36781172-36781277)
chr1 (179-285)||(7651697-7651803)
chr1 (179-285)||(25988271-25988377)
chr1 (179-285)||(28425363-28425469)
chr1 (179-285)||(38473626-38473732)
chr1 (179-285)||(49814335-49814441)
chr1 (179-285)||(16705905-16706011)
chr1 (179-285)||(26069927-26070033)
chr1 (179-285)||(26549423-26549529)
chr1 (179-285)||(33674052-33674158)
chr1 (179-285)||(36157678-36157783)
chr1 (179-285)||(46051485-46051591)
chr1 (179-285)||(48669396-48669502)
chr1 (179-285)||(48802331-48802437)
chr1 (179-285)||(50689978-50690084)
chr1 (182-285)||(24204474-24204577)
chr1 (179-285)||(5400905-5401011)
chr1 (179-285)||(9962786-9962892)
chr1 (179-285)||(18892364-18892470)
chr1 (179-285)||(23228194-23228300)
chr1 (179-285)||(37216931-37217037)
chr1 (179-285)||(43396710-43396816)
chr1 (180-285)||(50533418-50533523)
chr1 (179-282)||(6711478-6711581)
chr1 (179-285)||(45350717-45350821)
chr1 (179-285)||(7608766-7608872)
chr1 (179-285)||(33325762-33325868)
chr1 (179-285)||(46095075-46095181)
chr1 (198-285)||(9974877-9974964)
chr1 (179-285)||(9878784-9878890)
chr1 (200-285)||(33194672-33194757)
chr1 (181-285)||(41982237-41982341)
chr1 (179-285)||(21929554-21929667)
chr1 (179-285)||(45670486-45670592)
chr1 (179-285)||(8141486-8141592)
chr1 (179-285)||(21965100-21965206)
chr1 (179-285)||(34971115-34971221)
chr1 (179-281)||(52067651-52067753)
chr1 (179-281)||(52147032-52147134)
chr1 (179-285)||(52349924-52350030)
chr1 (200-285)||(48319067-48319152)
chr1 (200-276)||(30281675-30281751)
chr1 (200-279)||(16506809-16506888)
chr1 (216-285)||(12964681-12964750)
chr1 (180-285)||(18917559-18917664)
chr1 (179-271)||(40721392-40721484)
chr1 (179-285)||(17983898-17984004)
chr1 (179-285)||(18782089-18782195)
chr1 (179-280)||(44978768-44978868)
chr1 (179-269)||(33714361-33714451)
chr1 (179-285)||(25800679-25800782)
[»] scaffold1986 (1 HSPs)
scaffold1986 (179-285)||(149-255)
[»] scaffold0004 (1 HSPs)
scaffold0004 (179-285)||(218920-219027)
[»] scaffold0005 (1 HSPs)
scaffold0005 (179-285)||(252438-252544)
[»] scaffold0693 (1 HSPs)
scaffold0693 (179-285)||(5027-5133)
[»] scaffold0727 (1 HSPs)
scaffold0727 (179-285)||(5221-5326)
[»] scaffold0184 (1 HSPs)
scaffold0184 (179-281)||(13134-13236)
[»] scaffold0096 (1 HSPs)
scaffold0096 (179-285)||(47997-48103)
[»] scaffold0078 (1 HSPs)
scaffold0078 (179-281)||(59608-59710)
[»] scaffold0542 (1 HSPs)
scaffold0542 (200-285)||(1994-2079)
[»] scaffold0122 (1 HSPs)
scaffold0122 (180-285)||(11393-11498)
[»] scaffold1562 (1 HSPs)
scaffold1562 (179-260)||(599-680)
[»] scaffold1158 (1 HSPs)
scaffold1158 (179-260)||(1913-1994)
[»] scaffold0952 (1 HSPs)
scaffold0952 (179-260)||(3371-3452)
[»] scaffold0717 (1 HSPs)
scaffold0717 (179-260)||(1877-1958)


Alignment Details
Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 8216041 - 8215935
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8216041 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 8215942  T
Q  279 ttagtca 285  Q
    |||||||    
T  8215941 ttagtca 8215935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 11000728 - 11000834
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11000728 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 11000827  T
Q  279 ttagtca 285  Q
    |||||||    
T  11000828 ttagtca 11000834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 14717746 - 14717640
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14717746 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 14717647  T
Q  279 ttagtca 285  Q
    |||||||    
T  14717646 ttagtca 14717640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 38964114 - 38964220
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38964114 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 38964213  T
Q  279 ttagtca 285  Q
    |||||||    
T  38964214 ttagtca 38964220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 6252113 - 6252007
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  6252113 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctgccttctaacacccacttaaaa 6252014  T
Q  279 ttagtca 285  Q
    |||||||    
T  6252013 ttagtca 6252007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 6600136 - 6600242
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  6600136 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggcttctaacacccacttaaaa 6600235  T
Q  279 ttagtca 285  Q
    |||||||    
T  6600236 ttagtca 6600242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 39002025 - 39002131
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39002025 gaattgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 39002124  T
Q  279 ttagtca 285  Q
    |||||||    
T  39002125 ttagtca 39002131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 3352002 - 3352108
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  3352002 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatatttggtaccaaatttggctcctaacacccacttaaaa 3352101  T
Q  279 ttagtca 285  Q
    |||||||    
T  3352102 ttagtca 3352108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 6739955 - 6740061
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  6739955 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctgcctcctaacacccacttaaaa 6740054  T
Q  279 ttagtca 285  Q
    |||||||    
T  6740055 ttagtca 6740061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 14952465 - 14952359
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14952465 gaatcgtttcaaacaagtcttgttgtagataacatagttggtaattgcttccttgaactcatctttggtatcaaatctggctcctaacacccacttaaaa 14952366  T
Q  279 ttagtca 285  Q
    |||||||    
T  14952365 ttagtca 14952359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 16095960 - 16096065
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  16095960 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca-tcttggtaccaaatctggctcctaacacccacttaaaa 16096058  T
Q  279 ttagtca 285  Q
    |||||||    
T  16096059 ttagtca 16096065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 27457197 - 27457303
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  27457197 gaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccactttaaa 27457296  T
Q  279 ttagtca 285  Q
    |||||||    
T  27457297 ttagtca 27457303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 30297749 - 30297855
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  30297749 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttcaactcatctttggtaccaaatctggctcctagcacccacttaaaa 30297848  T
Q  279 ttagtca 285  Q
    |||||||    
T  30297849 ttagtca 30297855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 33760470 - 33760576
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  33760470 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattacttctttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 33760569  T
Q  279 ttagtca 285  Q
    |||||||    
T  33760570 ttagtca 33760576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 35342321 - 35342215
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  35342321 gaatcgtttcaaacaagtctcattgtagatagcatagttgataattgcttccttgaactcatctttggtatcaaatctggctcctaacacccacttaaaa 35342222  T
Q  279 ttagtca 285  Q
    |||||||    
T  35342221 ttagtca 35342215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 30863393 - 30863288
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30863393 aatcgtttcaaacaagtcataatgtagatagcatagttggtaattgcttctttgaactcatctttggtaccaaatctggctcctaacacccacttaaaat 30863294  T
Q  280 tagtca 285  Q
    ||||||    
T  30863293 tagtca 30863288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 41282482 - 41282377
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  41282482 aatcatttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacactcacttaaaat 41282383  T
Q  280 tagtca 285  Q
    ||||||    
T  41282382 tagtca 41282377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 28078405 - 28078509
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  28078405 gaatcgtttcaaacaagtcctaatgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctggctcctaacacccacttaaaa 28078504  T
Q  279 ttagt 283  Q
    |||||    
T  28078505 ttagt 28078509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 1052674 - 1052572
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  1052674 gaattgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatccttggtaccaaatctggctcctaacacccacttaaaa 1052575  T
Q  279 tta 281  Q
    |||    
T  1052574 tta 1052572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 4015874 - 4015980
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  4015874 gaatcgtttcaagcaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacctacttaaaa 4015973  T
Q  279 ttagtca 285  Q
    |||||||    
T  4015974 ttagtca 4015980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 8689713 - 8689607
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8689713 gaatcgtttcaaacaagtcataatgtagataacatagttggtaattgattccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 8689614  T
Q  279 ttagtca 285  Q
    |||||||    
T  8689613 ttagtca 8689607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 11692147 - 11692253
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||    
T  11692147 gaatcgtttcaaacaagtcatattgcagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctgcctcctaacacccacttaaaa 11692246  T
Q  279 ttagtca 285  Q
    |||||||    
T  11692247 ttagtca 11692253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 20408674 - 20408568
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  20408674 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttcattgaactcatatttggtaccaaatctagctcctaacacccgcttaaaa 20408575  T
Q  279 ttagtca 285  Q
    |||||||    
T  20408574 ttagtca 20408568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 23128913 - 23129019
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  23128913 gaatcgtttcaaacaagtcatatcgtagatagcataattggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacaaccacttaaaa 23129012  T
Q  279 ttagtca 285  Q
    |||||||    
T  23129013 ttagtca 23129019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 26593280 - 26593382
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  26593280 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttctttgaacttatctttggtaccaaatctggctcctaacacccacttaaaa 26593379  T
Q  279 tta 281  Q
    |||    
T  26593380 tta 26593382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 31710423 - 31710317
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  31710423 gaatcgtttcaaacaagtcataatgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacatccacttaaaa 31710324  T
Q  279 ttagtca 285  Q
    |||||||    
T  31710323 ttagtca 31710317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 42993659 - 42993553
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  42993659 gaattgtttcaaacaattcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatttggctcctaacacccacttaaaa 42993560  T
Q  279 ttagtca 285  Q
    |||||||    
T  42993559 ttagtca 42993553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 19659501 - 19659607
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  19659501 gaatcgtttcaaataagtcctattgtagatagcatagttggtaattgcttttttgaactcatctttggtaccaaatctggctcctaatacccacttaaaa 19659600  T
Q  279 ttagtca 285  Q
    |||||||    
T  19659601 ttagtca 19659607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 20079258 - 20079364
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  20079258 gaatcgtttcaaacaagtcctaatgtagataacatagttggtaattgcttccttgaactcatctttagtaccaaatctgactcctaacacccacttaaaa 20079357  T
Q  279 ttagtca 285  Q
    |||||||    
T  20079358 ttagtca 20079364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 27116099 - 27116205
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  27116099 gaatcattttaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatatttggtaccaaatctggctcctaacatccacttcaaa 27116198  T
Q  279 ttagtca 285  Q
    |||||||    
T  27116199 ttagtca 27116205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 39824697 - 39824591
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  39824697 gaatcgtttcaaacaagtcctattgtagatgacatagttggtaattgcttccttgaacttatctttggtaccaaatctgcctcctaacacccacttaaaa 39824598  T
Q  279 ttagtca 285  Q
    |||||||    
T  39824597 ttagtca 39824591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 40075091 - 40074985
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  40075091 gaattgtttcaaacaagtcctattgtagataacatagttggtaattgcttcattgaactcatctttggtactaaatctggctcctaacacccacttaaaa 40074992  T
Q  279 ttagtca 285  Q
    |||||||    
T  40074991 ttagtca 40074985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 43166269 - 43166375
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||    
T  43166269 gaattgtttcaaacaagtcctattgtagatagcatagttggtaattgctttcttgaactcatctttggtaccaaatctgactcataacacccacttaaaa 43166368  T
Q  279 ttagtca 285  Q
    |||||||    
T  43166369 ttagtca 43166375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 19398193 - 19398299
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||  |||||||||||||||||    
T  19398193 gaatcatttcaaacaagttctattgtagatagcatagttggtaattgtttctttgaactcatctttggtaccaaatctagcctctaacacccacttaaaa 19398292  T
Q  279 ttagtca 285  Q
    |||||||    
T  19398293 ttagtca 19398299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 30208402 - 30208504
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||    
T  30208402 gaatcatttcaaacaagttctattgtagataacatagttggtaattgcttccttgaactcatctttgataccaaatttggctcctaacacctacttaaaa 30208501  T
Q  279 tta 281  Q
    |||    
T  30208502 tta 30208504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 16752236 - 16752151
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||    
T  16752236 attgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggatcctaacatccacttaaaatcagtca 16752151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 11935586 - 11935484
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||| ||| | ||||||| ||||||||||||| |||||||||    
T  11935586 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgtttccttgatctcatcttt-gaaccaaatgtggctcctaacactcacttaaaa 11935488  T
Q  279 ttag 282  Q
    ||||    
T  11935487 ttag 11935484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 26035367 - 26035452
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||    
T  26035367 attgtagataccatagttggtaattgctttcttgaactcatctttggtaccaaatatggctcctaatacccacttaaaatcagtca 26035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 6331479 - 6331412
Alignment:
Q  218 ggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  6331479 ggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaattagtca 6331412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 8695007 - 8694901
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| |||||||||||||||| ||| |||||  ||| |||||||||| ||| |||||||||||||||| ||| || |||||||||    
T  8695007 gaattgtttcaaacaagtcctattgtagatagcataattgataattatttcattgaactcatctttagtaccaaatctggctcataatactcacttaaaa 8694908  T
Q  279 ttagtca 285  Q
    |||||||    
T  8694907 ttagtca 8694901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 445074 - 444990
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtc 284  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| || ||||||| ||||||||||||| ||||    
T  445074 attgtagatagcatagttggtaattgctttcttgaactcatctttggtatcaaatatgactcctaaaacccacttaaaatcagtc 444990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 27510112 - 27510038
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaa 253  Q
    ||||||||||||||||||| |||||||   ||||||||||||||||||||| |||||||||| ||||||||||||    
T  27510112 gaatcgtttcaaacaagtcctattgtaataagcatagttggtaattgcttctttgaactcatctttggtaccaaa 27510038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 6332917 - 6332873
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaat 223  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||    
T  6332917 gaatcgtttcaaacaagttctattgtagatagaatagttggtaat 6332873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 7e-49; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 260118 - 260012
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  260118 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 260019  T
Q  279 ttagtca 285  Q
    |||||||    
T  260018 ttagtca 260012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 513448 - 513342
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  513448 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 513349  T
Q  279 ttagtca 285  Q
    |||||||    
T  513348 ttagtca 513342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 655803 - 655909
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  655803 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 655902  T
Q  279 ttagtca 285  Q
    |||||||    
T  655903 ttagtca 655909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 841538 - 841644
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  841538 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 841637  T
Q  279 ttagtca 285  Q
    |||||||    
T  841638 ttagtca 841644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 15847253 - 15847147
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15847253 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 15847154  T
Q  279 ttagtca 285  Q
    |||||||    
T  15847153 ttagtca 15847147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 37933783 - 37933677
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37933783 gaatcgtttcaaacaagtcttatcgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 37933684  T
Q  279 ttagtca 285  Q
    |||||||    
T  37933683 ttagtca 37933677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 38107240 - 38107138
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38107240 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 38107141  T
Q  279 tta 281  Q
    |||    
T  38107140 tta 38107138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 35884430 - 35884536
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  35884430 gaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcgtaacacccacttaaaa 35884529  T
Q  279 ttagtca 285  Q
    |||||||    
T  35884530 ttagtca 35884536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 179 - 283
Target Start/End: Complemental strand, 35443452 - 35443348
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35443452 gaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 35443353  T
Q  279 ttagt 283  Q
    |||||    
T  35443352 ttagt 35443348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 440981 - 440879
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  440981 gaatcgtttcaaacaagtcctattgtatatagcatagttggtaattgcttccttgaactcatttttcgtaccaaatctggctcctaacacccacttaaaa 440882  T
Q  279 tta 281  Q
    |||    
T  440881 tta 440879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 2533413 - 2533307
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  2533413 gaatcgtttcaaacaagtcatattgtagatatcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctccaaacacccacttaaaa 2533314  T
Q  279 ttagtca 285  Q
    |||||||    
T  2533313 ttagtca 2533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 23972295 - 23972401
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  23972295 gaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatttttggtaccaaatctgactcctatcacccacttaaaa 23972394  T
Q  279 ttagtca 285  Q
    |||||||    
T  23972395 ttagtca 23972401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 43806533 - 43806639
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||    
T  43806533 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtactaaatctggctcctaacactcacttaaaa 43806632  T
Q  279 ttagtca 285  Q
    |||||||    
T  43806633 ttagtca 43806639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 22683988 - 22684094
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22683988 gaatcatttcaaacaagtcatattgtagatatcatagttggtaattgtttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 22684087  T
Q  279 ttagtca 285  Q
    |||||||    
T  22684088 ttagtca 22684094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 36400070 - 36400176
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||     
T  36400070 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgccttctaacacccacttaaac 36400169  T
Q  279 ttagtca 285  Q
    |||||||    
T  36400170 ttagtca 36400176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 38208894 - 38208788
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  38208894 gaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttctttgaactcatctttgctaccaaatctggctcctaacacccacttaaaa 38208795  T
Q  279 ttagtca 285  Q
    |||||||    
T  38208794 ttagtca 38208788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 41536527 - 41536633
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||||||||    
T  41536527 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaatttatctttggtaccaaatctgactcctaacacccacttaaaa 41536626  T
Q  279 ttagtca 285  Q
    |||||||    
T  41536627 ttagtca 41536633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 3876049 - 3875943
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||||||    
T  3876049 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtactatatctggttcctaacacccacttaaaa 3875950  T
Q  279 ttagtca 285  Q
    |||||||    
T  3875949 ttagtca 3875943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 1293627 - 1293521
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||    
T  1293627 gaatcgtttcaaacaagtcatgttgtagataacatagttggtaattgcttccttgaactcatctttggtatcaaatctggtttctaacacccacttaaaa 1293528  T
Q  279 ttagtca 285  Q
    |||||||    
T  1293527 ttagtca 1293521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 28707446 - 28707552
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  28707446 gaatcgtttcaaacaaatcctattgtagatatcataattggtaattgcttccttgaactcatctttgataccaaatctggctcataacacccacttaaaa 28707545  T
Q  279 ttagtca 285  Q
    |||||||    
T  28707546 ttagtca 28707552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 38633710 - 38633816
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||    
T  38633710 gaatcgtttcaaacaagttctaatgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgatttctaacacccacttaaaa 38633809  T
Q  279 ttagtca 285  Q
    |||||||    
T  38633810 ttagtca 38633816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 9056338 - 9056444
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||| ||||||||| ||||||||||    
T  9056338 gaattgtttcaaacaagtcctattgtagataacatagttggtaattgcttctttgaactcatctttgataccaaatctgactcctaacatccacttaaaa 9056437  T
Q  279 ttagtca 285  Q
    |||||||    
T  9056438 ttagtca 9056444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 28496355 - 28496460
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||||||||||    
T  28496355 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctag-ttctaatacccacttaaaa 28496453  T
Q  279 ttagtca 285  Q
    |||||||    
T  28496454 ttagtca 28496460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 33651982 - 33651876
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||| |||  ||||||||||| ||||||||||||||||||||    
T  33651982 gaatcgtttcaaacaagtcctatcgtagatagcatagtttgtaattgtttccttgaactcatctttcataccaaatctgcctcctaacacccacttaaaa 33651883  T
Q  279 ttagtca 285  Q
    |||||||    
T  33651882 ttagtca 33651876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 7435006 - 7434921
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  7435006 attgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaattagtca 7434921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 12010693 - 12010584
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtag---atagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccactta 275  Q
    |||| |||||||||||||| ||||||||   ||||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12010693 gaattgtttcaaacaagtcctattgtagtagatagcatagttggtaattgttgccttgaactcatctttggtaccaaatttggctcctaacacccactta 12010594  T
Q  276 aaattagtca 285  Q
    ||||||||||    
T  12010593 aaattagtca 12010584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 13797229 - 13797124
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||| |||| |||||    
T  13797229 gaatcgtttcaaacaaatcctattgtatatagcatagttggtaattgcttctttgaactca-ttttggtatcaaatctggctcctaacatccacataaaa 13797131  T
Q  279 ttagtca 285  Q
    |||||||    
T  13797130 ttagtca 13797124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 40301893 - 40301995
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| | || ||||||||||||||| ||||||||||| |||||||||    
T  40301893 gaatcgtttcaaaaaagtcatattgtagatagcatagttggtaattgcttcattgaatttatctttggtaccaaatctagctcctaacactcacttaaaa 40301992  T
Q  279 tta 281  Q
    |||    
T  40301993 tta 40301995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 23935353 - 23935268
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||    
T  23935353 attgtagatagcatagttgataattgcttccttgaactcatctttagtaccaaatctggctcctaacacccacttaaaatcagtca 23935268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 39513344 - 39513445
Alignment:
Q  184 gtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagt 283  Q
    |||||||| ||||| || |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  39513344 gtttcaaataagtcctaatgtagataacatagttggtaattgctttcttgaactcatctttggtaccaaatctaactcctaacacccacttaaaattagt 39513443  T
Q  284 ca 285  Q
    ||    
T  39513444 ca 39513445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 4649291 - 4649185
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||| || | |||| ||||||||||    
T  4649291 gaatcgtttcaaacaagtccaattgtagatagcataattggtaattgtttccttgaactcgtctttggtaccaaatctgacttccaacatccacttaaaa 4649192  T
Q  279 ttagtca 285  Q
    |||||||    
T  4649191 ttagtca 4649185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 24430571 - 24430677
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||| ||  |||||||||| |||||||||||||||  || |||||||||||||||||    
T  24430571 gaatcgtttcaaacaagtcctattgtagatagtatagttgataattgttttattgaactcatctttggtaccaaatctcactactaacacccacttaaaa 24430670  T
Q  279 ttagtca 285  Q
    |||||||    
T  24430671 ttagtca 24430677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 29485406 - 29485321
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| |||||    
T  29485406 attgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctaactcctaacacccacttaaaatcagtca 29485321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 42988227 - 42988332
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| ||||| |||||||||||  ||||||| |||||||||| || |||| || |||||||||||||||  ||||||||||||||||||||    
T  42988227 gaatcgtttcaaa-aagtcctattgtagataatatagttgataattgcttcatttaacttatatttggtaccaaatctaactcctaacacccacttaaaa 42988325  T
Q  279 ttagtca 285  Q
    |||||||    
T  42988326 ttagtca 42988332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 36218781 - 36218883
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |  ||||||||  ||||||| |||||||||| |||||||||| |||||||||||||||| || ||| |||||||||||||    
T  36218781 gaatcgtttcaaacaagtcatgatgtagataatatagttgataattgcttc-ttgaactcatctttggtaccaaatctgacttctagcacccacttaaaa 36218879  T
Q  279 ttag 282  Q
    ||||    
T  36218880 ttag 36218883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 24193131 - 24193191
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcat 240  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24193131 aatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcat 24193191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 6016325 - 6016240
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||||||||||| || ||||||| |||| |||  ||| |||||||||||| ||||||||||| |||||    
T  6016325 attgtagatagcatagttggtaattgcttctttaaactcatctttgatactcaatttggctcctaacatccacttaaaatcagtca 6016240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 24193356 - 24193398
Alignment:
Q  242 tttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  24193356 tttggtaccaaatctggctcctaaca-ccacttaaaattagtca 24193398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 8137274 - 8137240
Alignment:
Q  184 gtttcaaacaagtcttattgtagatagcatagttg 218  Q
    |||||||||||||||||||||||||||||||||||    
T  8137274 gtttcaaacaagtcttattgtagatagcatagttg 8137240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 11476556 - 11476662
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11476556 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 11476655  T
Q  279 ttagtca 285  Q
    |||||||    
T  11476656 ttagtca 11476662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 1469493 - 1469599
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  1469493 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttgttaccaaatctggctcctaacacccacttaaaa 1469592  T
Q  279 ttagtca 285  Q
    |||||||    
T  1469593 ttagtca 1469599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 2960640 - 2960746
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2960640 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 2960739  T
Q  279 ttagtca 285  Q
    |||||||    
T  2960740 ttagtca 2960746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 30798368 - 30798474
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30798368 gaatcgtttcaaacaaatcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 30798467  T
Q  279 ttagtca 285  Q
    |||||||    
T  30798468 ttagtca 30798474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 41113518 - 41113412
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41113518 gaatcatttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatatttggtaccaaatctggctcctaacacccacttaaaa 41113419  T
Q  279 ttagtca 285  Q
    |||||||    
T  41113418 ttagtca 41113412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 47281124 - 47281230
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47281124 gaatcgtttcaaacaagtcctattgtagataccatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 47281223  T
Q  279 ttagtca 285  Q
    |||||||    
T  47281224 ttagtca 47281230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 221416 - 221311
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  221416 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 221317  T
Q  279 ttagtc 284  Q
    ||||||    
T  221316 ttagtc 221311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 44544549 - 44544444
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  44544549 aatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatatggctcctaacacccacttaaaat 44544450  T
Q  280 tagtca 285  Q
    ||||||    
T  44544449 tagtca 44544444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 35600122 - 35600226
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35600122 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatatggctcctaacacccacttaaaa 35600221  T
Q  279 ttagt 283  Q
    |||||    
T  35600222 ttagt 35600226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 23842446 - 23842340
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||    
T  23842446 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctggctcctaacacccacttcaaa 23842347  T
Q  279 ttagtca 285  Q
    |||||||    
T  23842346 ttagtca 23842340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 31684134 - 31684240
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  31684134 gaatcgtttcaaacaagtcctattgtagatagaatagttggtaattgcttccttgaactcatctttggtaccaaatttggctcctaacacccacttaaaa 31684233  T
Q  279 ttagtca 285  Q
    |||||||    
T  31684234 ttagtca 31684240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 33884459 - 33884357
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  33884459 aatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaat 33884360  T
Q  280 tag 282  Q
    |||    
T  33884359 tag 33884357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 38427563 - 38427669
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  38427563 gaatcgtttcaaacaagtcctattatagatagcatagttggtaattgcttccttgaactcatctttggtatcaaatctggctcctaacacccacttaaaa 38427662  T
Q  279 ttagtca 285  Q
    |||||||    
T  38427663 ttagtca 38427669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 47272122 - 47272016
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  47272122 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtaccgaatctggctcctaacacccacttaaaa 47272023  T
Q  279 ttagtca 285  Q
    |||||||    
T  47272022 ttagtca 47272016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 47219285 - 47219180
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  47219285 aatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtactaaatctggctcctaacatccacttaaaat 47219186  T
Q  280 tagtca 285  Q
    ||||||    
T  47219185 tagtca 47219180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 8162712 - 8162818
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  8162712 gaattgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttgttatcaaatctggctcctaacacccacttaaaa 8162811  T
Q  279 ttagtca 285  Q
    |||||||    
T  8162812 ttagtca 8162818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 30876400 - 30876294
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  30876400 gaatcgtttcaaacaagtgctattgtagatagcatagttggtaattgcttcattgaactcatttttggtaccaaattgggctcctaacacccacttaaaa 30876301  T
Q  279 ttagtca 285  Q
    |||||||    
T  30876300 ttagtca 30876294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 40851415 - 40851309
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  40851415 gaatcgtttcaaacaagtcctattgtaggtagaatagttggtaattgcttccttgaactaatctttggtaccaaatctggctcctaacacccacttaaaa 40851316  T
Q  279 ttagtca 285  Q
    |||||||    
T  40851315 ttagtca 40851309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 47294291 - 47294397
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||    
T  47294291 gaatcgtttcaaacaagtcctattgtagatagcatcgttggtaattgcttccttgaactcatctttggtacaaaatctggctcctaacacccacttataa 47294390  T
Q  279 ttagtca 285  Q
    |||||||    
T  47294391 ttagtca 47294397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 11050261 - 11050367
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||    
T  11050261 gaatcgtttcaaacaagtcctattgtagatagcatatttggtaattgcttccttgaattcatctttggtaccaaatctgcctcctaatacccacttaaaa 11050360  T
Q  279 ttagtca 285  Q
    |||||||    
T  11050361 ttagtca 11050367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 37393998 - 37394104
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||    
T  37393998 gaatcgtttcaaacaagtcctattgtagatagcatagttggtagttgcttccttgaactcatctttggtaccaaatttgactcctaacacccagttaaaa 37394097  T
Q  279 ttagtca 285  Q
    |||||||    
T  37394098 ttagtca 37394104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 43752776 - 43752882
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  43752776 gaatcgtttcaaacaagtcctattgtagatagcataattggtaattgcttccttgaactcatctttggtactaaatctgactcctaacatccacttaaaa 43752875  T
Q  279 ttagtca 285  Q
    |||||||    
T  43752876 ttagtca 43752882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 48628946 - 48628844
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  48628946 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcattttttgcaccaaatttggctcctaacacccacttaaaa 48628847  T
Q  279 tta 281  Q
    |||    
T  48628846 tta 48628844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 4923352 - 4923251
Alignment:
Q  184 gtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagt 283  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  4923352 gtttcaaacaagtcctattgtggatagcatagttggtaattacttccttgaactcatctttggtaccaaatctggctcctaacatccacttaaaattagt 4923253  T
Q  284 ca 285  Q
    ||    
T  4923252 ca 4923251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 29248482 - 29248377
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | |||||||| |||||||||||||||||||||    
T  29248482 aatcatttcaaacaagtcttattgtagatagcatagttggtaattgattccttgaactcatctttggcatcaaatctgcctcctaacacccacttaaaat 29248383  T
Q  280 tagtca 285  Q
    ||||||    
T  29248382 tagtca 29248377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 27364339 - 27364445
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||  || ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  27364339 gaatcgtttcaaacagatcctattgtagataacatagttggtaattacttccttgaactcatctttggtaccaaatttggctcctaacacccacttaaaa 27364438  T
Q  279 ttagtca 285  Q
    |||||||    
T  27364439 ttagtca 27364445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 30971941 - 30972047
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||||| |||||||||||||||||||||||    
T  30971941 gaatcgtttcaaacaagtcatattgtagatggcatagttggtaattacttccttaaacccatctttggtaccaaatttggctcctaacacccacttaaaa 30972040  T
Q  279 ttagtca 285  Q
    |||||||    
T  30972041 ttagtca 30972047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 7336200 - 7336095
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  7336200 gaatcgtttcaaacagttct-attgtagatagcatagttgataattgcttccttgaactcatcattgataccaaatctggctcctaacacccacttaaaa 7336102  T
Q  279 ttagtca 285  Q
    |||||||    
T  7336101 ttagtca 7336095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 42889144 - 42889066
Alignment:
Q  26 agaagttgggctaggtgagattcttaatcaaatatcgaattcttcttaaatttttcaataaattaaggtcaaatgtaag 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42889144 agaagttgggctaggtgagattcttaatcaaatatcgaattcttcttaaaattttcaataaattaaggtcaaatgtaag 42889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 43968259 - 43968365
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| || ||||| |||||| ||| ||||||||||||    
T  43968259 gaatcgtttcaaacaagtcctattgtagatagcgtagttggtaattgcttccttgaactcatctttgatatcaaatttggctcataatacccacttaaaa 43968358  T
Q  279 ttagtca 285  Q
    |||||||    
T  43968359 ttagtca 43968365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 45723491 - 45723597
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||| || |||||||||||||||| || ||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  45723491 gaatcgtttcaaacaaatcatattgtagatagcataattagtaattgttttcttgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 45723590  T
Q  279 ttagtca 285  Q
    |||||||    
T  45723591 ttagtca 45723597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 3797544 - 3797629
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  3797544 attgtagatagcatagttgataattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaatcagtca 3797629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 41139408 - 41139518
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcata----gttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccactt 274  Q
    ||||||||||||||||||| ||||||| ||||||||    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||    
T  41139408 gaatcgtttcaaacaagtcctattgtaaatagcatatatagttggtaattgcttccttgaactcatctttggtactaaatctggctcctaacacccgctt 41139507  T
Q  275 aaaattagtca 285  Q
    |||||||||||    
T  41139508 aaaattagtca 41139518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 179 - 283
Target Start/End: Complemental strand, 47120134 - 47120028
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcata--gttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaa 276  Q
    ||||||||||||||||||| ||||||||| ||||||  |||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||||    
T  47120134 gaatcgtttcaaacaagtcctattgtagagagcatatagttggtaattgctttcttgaactcatatttggtaccaaatatgactcctaacacccacttaa 47120035  T
Q  277 aattagt 283  Q
    |||||||    
T  47120034 aattagt 47120028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 42979338 - 42979444
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || |||||||| ||||||||||||||||||| |||||||||| |||| || |||||||| ||||||||| ||||||||||    
T  42979338 gaatcgtttcaaacaagtcctactgtagataacatagttggtaattgcttcgttgaactcatctttgatatcaaatctgactcctaacatccacttaaaa 42979437  T
Q  279 ttagtca 285  Q
    |||||||    
T  42979438 ttagtca 42979444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 44800410 - 44800516
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| | ||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  44800410 gaattgtttcaaacaagtcctgttgtagataacatagttggtaattgtttcattgaactcatctttggtaccaaatatggttcctaacacccacttaaaa 44800509  T
Q  279 ttagtca 285  Q
    |||||||    
T  44800510 ttagtca 44800516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 47579086 - 47579189
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaatt-gcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaa 277  Q
    |||| |||||| ||||||| |||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  47579086 gaattgtttcagacaagtcctattatagatagcataattggtaatttgcttccttgaactcatctttggtaccaaatatggctcctaacacccacttaaa 47579185  T
Q  278 atta 281  Q
    ||||    
T  47579186 atta 47579189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 18353285 - 18353179
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||| || ||||||||||| |||| ||||||||||| ||||||||||| | ||||||    
T  18353285 gaatcgtttcaaacaagtcctaaggtagatagcatagttggtaattgttttcttgaactcatctttgataccaaatctgactcctaacacctaattaaaa 18353186  T
Q  279 ttagtca 285  Q
    |||||||    
T  18353185 ttagtca 18353179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 37354284 - 37354369
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||| |||||    
T  37354284 attgtagatagcatagttggtaattgcttcattgaactcatctttggtatcaaatttggctcctaacacccacttaaaatcagtca 37354369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 27774228 - 27774149
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||    
T  27774228 attgtagatagcatagttggtaattgcttccttgaactcaaccttggtaccaaatctggctcctaaaacccacttaaaat 27774149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 42888990 - 42888937
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttcctt 232  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42888990 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttcctt 42888937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 40521011 - 40520953
Alignment:
Q  227 ttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  40521011 ttccttgaactcatctttggtaccaaatatggctcctaacacccacttaaaatcagtca 40520953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 5106182 - 5106127
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaa 235  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  5106182 gaatcgtttcaaacat-tcttattgtagatagcatagttggtaattgcttccttgaa 5106127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 7e-49; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 3408330 - 3408224
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3408330 gaatcgtttcaaacaagtcatattgtagatagtatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 3408231  T
Q  279 ttagtca 285  Q
    |||||||    
T  3408230 ttagtca 3408224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 8178249 - 8178355
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8178249 gaatcgtttcaaacatgtcctattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 8178348  T
Q  279 ttagtca 285  Q
    |||||||    
T  8178349 ttagtca 8178355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 29050413 - 29050307
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29050413 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 29050314  T
Q  279 ttagtca 285  Q
    |||||||    
T  29050313 ttagtca 29050307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 10256378 - 10256272
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10256378 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggttcctaacacccacttaaaa 10256279  T
Q  279 ttagtca 285  Q
    |||||||    
T  10256278 ttagtca 10256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 30379158 - 30379052
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  30379158 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggcttctaacacccacttaaaa 30379059  T
Q  279 ttagtca 285  Q
    |||||||    
T  30379058 ttagtca 30379052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 6503858 - 6503753
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  6503858 aatcgtttcaaacaagtcctattgtagatatcatagttggtaattgcttccttgaacccatctttggtaccaaatctggctcctaacacccacttaaaat 6503759  T
Q  280 tagtca 285  Q
    ||||||    
T  6503758 tagtca 6503753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 1915343 - 1915445
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  1915343 gaatagtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctggctcctaacacccacttaaaa 1915442  T
Q  279 tta 281  Q
    |||    
T  1915443 tta 1915445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 2707600 - 2707494
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  2707600 gaatcgtttcaaacaagtcctattgtagatatcatagttggtaattgcttccttgaactcgtctttggtaccaaatctggctcctaacactcacttaaaa 2707501  T
Q  279 ttagtca 285  Q
    |||||||    
T  2707500 ttagtca 2707494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 12626777 - 12626671
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  12626777 gaatcgtttcaaacaagtcctattgtagatagaatagttggtaattgcttccttgaacttatctttggtaccaaatttggctcctaacacccacttaaaa 12626678  T
Q  279 ttagtca 285  Q
    |||||||    
T  12626677 ttagtca 12626671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 17428272 - 17428378
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||    
T  17428272 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtactaaatctggctcctaacatccacttaaaa 17428371  T
Q  279 ttagtca 285  Q
    |||||||    
T  17428372 ttagtca 17428378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 17943177 - 17943071
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  17943177 gaatcgtttcaaacaagtcctaatgtagatagcataattggtaattgcttccttaaactcatctttggtaccaaatctggctcctaacacccacttaaaa 17943078  T
Q  279 ttagtca 285  Q
    |||||||    
T  17943077 ttagtca 17943071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 11134015 - 11133908
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttcctt-gaactcatttttggtaccaaatctggctcctaacacccacttaaa 277  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  11134015 gaatcgtttcaaacaagtcctatcgtagatagcatagatggtaattgcttcctttgaactcatctttggtaccaaatctggctcctaacacccacttaaa 11133916  T
Q  278 attagtca 285  Q
    ||||||||    
T  11133915 attagtca 11133908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 2390406 - 2390300
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||    
T  2390406 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatatagctcctaacacccacttataa 2390307  T
Q  279 ttagtca 285  Q
    |||||||    
T  2390306 ttagtca 2390300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 2598099 - 2598201
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  2598099 gaatcgtttcaaacaagtcatattgtagatatcatagttggtaattgctttattgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 2598198  T
Q  279 tta 281  Q
    |||    
T  2598199 tta 2598201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 9382660 - 9382554
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  9382660 gaatcgtttcaaacaagtcctgatgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctgcctcctaacacccacttaaaa 9382561  T
Q  279 ttagtca 285  Q
    |||||||    
T  9382560 ttagtca 9382554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 26393009 - 26393115
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  26393009 gaatcgtttcaaaaaacttctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacactcacttaaaa 26393108  T
Q  279 ttagtca 285  Q
    |||||||    
T  26393109 ttagtca 26393115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 1077378 - 1077276
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  1077378 gaatcgtttcaaataagtcatgttgtagatagcatagttggtaattgcttccttgaactcatctttggtatcaaatctggttcctaacacccacttaaaa 1077279  T
Q  279 tta 281  Q
    |||    
T  1077278 tta 1077276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 3258807 - 3258913
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagtt-ggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaa 277  Q
    ||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  3258807 gaatcgtttcaaacaagttctattgtagataccatagtttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaaca-ccacttaaa 3258905  T
Q  278 attagtca 285  Q
    ||||||||    
T  3258906 attagtca 3258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 198 - 285
Target Start/End: Original strand, 35223918 - 35224005
Alignment:
Q  198 ttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  35223918 ttattgtagatagcatagttggtaattgcttccttgaactcatctttggtatcaaatctagctcctaacacccacttaaaattagtca 35224005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 26230932 - 26231038
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || |||| ||| ||||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  26230932 gaatcgtttcaaacaagtcctaatgtaaataacatagttggtagtttcttccttgaactcatctttggtaccaaatctggcttctaacacccacttaaaa 26231031  T
Q  279 ttagtca 285  Q
    |||||||    
T  26231032 ttagtca 26231038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 6785101 - 6785204
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || |||||||| |||| |||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6785101 gaatcgtttcaaacaagtcctaatgtagataacataattggt---tgcttccttgaactcatatttggtaccaaatctggctcctaacacccacttaaaa 6785197  T
Q  279 ttagtca 285  Q
    |||||||    
T  6785198 ttagtca 6785204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 31376058 - 31375971
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaac 266  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  31376058 gaatcgtttcaaacaagtcctattgtagatagcatagttgttaattgcttccttgaacttatctttggtaccaaatctggctcctaac 31375971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 16193451 - 16193345
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  || || |||||  ||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  16193451 gaatcgtttcaaacaagttctaatgcagataaaatagttggtaattgcttccttgaactcatctttgataccaaatttggctcctaacacccacttaaaa 16193352  T
Q  279 ttagtca 285  Q
    |||||||    
T  16193351 ttagtca 16193345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 25820550 - 25820655
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||  ||| ||||||||| |||||||    
T  25820550 aatcgtttcaaacaattcctatcgtagatagcatagttggtaattgcttcattgaactcatgtttggtaccaaatctaactcataacacccatttaaaat 25820649  T
Q  280 tagtca 285  Q
    ||||||    
T  25820650 tagtca 25820655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 26936727 - 26936642
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  26936727 attgtagatagcatagttgataattgtttccttgaactcatctttggtaccaaatccggctcctaacacccacttaaaatcagtca 26936642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 10931148 - 10931253
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||| ||||||||||| || ||| ||||||||||||| |||||| || ||||||||||| |||||||||||||||| || ||||||||| |||||||    
T  10931148 gaatcgtatcaaacaagtcctaatgtggatagcatagttg-taattgttttcttgaactcatctttggtaccaaatctgacttctaacacccgcttaaaa 10931246  T
Q  279 ttagtca 285  Q
    |||||||    
T  10931247 ttagtca 10931253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 26196321 - 26196423
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagtt-ggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaa 277  Q
    |||||| ||||| |||||| ||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||  ||||||||    
T  26196321 gaatcggttcaaccaagtcctattgtagataacatagtttggtaattgcttccgtgaactcatctttggtactaaatctggctcctaaca-acacttaaa 26196419  T
Q  278 atta 281  Q
    ||||    
T  26196420 atta 26196423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 12612971 - 12613029
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaact 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12612971 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 12613029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 12612848 - 12612927
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctgg 258  Q
    ||||| ||||||||||||| |||||||||||||| |||| ||| ||||||| |||||||||| |||| ||||||||||||    
T  12612848 gaatcatttcaaacaagtcctattgtagatagcaaagttagtacttgcttcattgaactcatctttgctaccaaatctgg 12612927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 26017564 - 26017458
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26017564 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 26017465  T
Q  279 ttagtca 285  Q
    |||||||    
T  26017464 ttagtca 26017458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 31591216 - 31591110
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31591216 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 31591117  T
Q  279 ttagtca 285  Q
    |||||||    
T  31591116 ttagtca 31591110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 12196610 - 12196508
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12196610 gaatcatttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 12196511  T
Q  279 tta 281  Q
    |||    
T  12196510 tta 12196508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 23135006 - 23135112
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23135006 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 23135105  T
Q  279 ttagtca 285  Q
    |||||||    
T  23135106 ttagtca 23135112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 24458631 - 24458737
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  24458631 gaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcgtaacacccacttaaaa 24458730  T
Q  279 ttagtca 285  Q
    |||||||    
T  24458731 ttagtca 24458737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 35930180 - 35930074
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35930180 gaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccatgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 35930081  T
Q  279 ttagtca 285  Q
    |||||||    
T  35930080 ttagtca 35930074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 42273943 - 42273837
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  42273943 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 42273844  T
Q  279 ttagtca 285  Q
    |||||||    
T  42273843 ttagtca 42273837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 10588719 - 10588615
Alignment:
Q  181 atcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaatt 280  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  10588719 atcgtttcaaacaagtcgtattgtagatagcatagttggtaattgcttccttgaactcatatttggtaccaaatctggctcctaacacccacttaaaact 10588620  T
Q  281 agtca 285  Q
    |||||    
T  10588619 agtca 10588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 5227531 - 5227425
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  5227531 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctagtatccacttaaaa 5227432  T
Q  279 ttagtca 285  Q
    |||||||    
T  5227431 ttagtca 5227425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 17847096 - 17847202
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  17847096 gaatcgtttcaaacaagtcctattgtagatagcataattggtaattgcttccttgaactcatctttgataccaaatctggctcctaacacccacttaaaa 17847195  T
Q  279 ttagtca 285  Q
    |||||||    
T  17847196 ttagtca 17847202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 28264784 - 28264678
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||    
T  28264784 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgtctcataacacccacttaaaa 28264685  T
Q  279 ttagtca 285  Q
    |||||||    
T  28264684 ttagtca 28264678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 31208885 - 31208779
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  31208885 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtatcaaatctggctcccaacacccacttaaaa 31208786  T
Q  279 ttagtca 285  Q
    |||||||    
T  31208785 ttagtca 31208779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 31973732 - 31973626
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  31973732 gaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 31973633  T
Q  279 ttagtca 285  Q
    |||||||    
T  31973632 ttagtca 31973626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 33807780 - 33807886
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  33807780 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaactcatctttggtaccaaatttggctcctaacacccacttaaaa 33807879  T
Q  279 ttagtca 285  Q
    |||||||    
T  33807880 ttagtca 33807886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 49118752 - 49118646
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  49118752 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttcattgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 49118653  T
Q  279 ttagtca 285  Q
    |||||||    
T  49118652 ttagtca 49118646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 55517185 - 55517291
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  55517185 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttctttgaactcatctttgataccaaatctggctcctaacacccacttaaaa 55517284  T
Q  279 ttagtca 285  Q
    |||||||    
T  55517285 ttagtca 55517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 33174021 - 33174126
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  33174021 aatcgtttcaaacaagtcttattgtagatttcatagttggtaattgcttccttgaactcatctttagtaccaaatctggctcctaacacccacttaaaat 33174120  T
Q  280 tagtca 285  Q
    ||||||    
T  33174121 tagtca 33174126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 40988773 - 40988668
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40988773 aatcgtttcaaacaagtcctattgtagatagcatagttgataattgcttccttgaactcatctttggtatcaaatctggctcctaacacccacttaaaat 40988674  T
Q  280 tagtca 285  Q
    ||||||    
T  40988673 tagtca 40988668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 50276138 - 50276243
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  50276138 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgattcctaacacccacttaaaa 50276237  T
Q  279 ttagtc 284  Q
    ||||||    
T  50276238 ttagtc 50276243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 4544985 - 4545091
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  4544985 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttaaactcatctttgataccaaatctggctcctaacacccacttaaaa 4545084  T
Q  279 ttagtca 285  Q
    |||||||    
T  4545085 ttagtca 4545091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 11795154 - 11795260
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  11795154 gaatcgtttcaaacaagtcatattctagatagcatagttggtaattgtttccttgaactcatctttggtaccaaatttggctcctaacacccacttaaaa 11795253  T
Q  279 ttagtca 285  Q
    |||||||    
T  11795254 ttagtca 11795260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 14564937 - 14564831
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  14564937 gaatcgtttcaaacaagtcctattgtatatagcatagttggtaattgcttcattgaactcatttttcgtaccaaatctggctcctaacacccagttaaaa 14564838  T
Q  279 ttagtca 285  Q
    |||||||    
T  14564837 ttagtca 14564831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 28159953 - 28160059
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  28159953 gaatcatttcaaacaagtcttattgtagataccatagttggtaattgctttcttgaactcatctttggtatcaaatctggctcctaacacccacttaaaa 28160052  T
Q  279 ttagtca 285  Q
    |||||||    
T  28160053 ttagtca 28160059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 28812287 - 28812392
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  28812287 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaagtcatctttggtaccaaatctggctcctaaca-ccacttaaaa 28812385  T
Q  279 ttagtca 285  Q
    |||||||    
T  28812386 ttagtca 28812392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 48707733 - 48707839
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  48707733 gaatcttttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacatccacttaaaa 48707832  T
Q  279 ttagtca 285  Q
    |||||||    
T  48707833 ttagtca 48707839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 37381986 - 37381881
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||    
T  37381986 aatcatttcaaacaagtcatattgtagatagcatagttggtaattgcttccttaaactcatttttggtaccatatctggttcctaacacccacttaaaat 37381887  T
Q  280 tagtca 285  Q
    ||||||    
T  37381886 tagtca 37381881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 8882013 - 8882119
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  8882013 gaatcgtttcaaacaagtcctattctagatagcatagttgataattgcttctttgaactcatctttggtatcaaatctggctcctaacacccacttaaaa 8882112  T
Q  279 ttagtca 285  Q
    |||||||    
T  8882113 ttagtca 8882119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 19496102 - 19496208
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  19496102 gaattgtttcaaacaagtcctattgtagataccatagttggtaattgcttccttgaactcatctttggtaccaaatttggcgcctaacacccacttaaaa 19496201  T
Q  279 ttagtca 285  Q
    |||||||    
T  19496202 ttagtca 19496208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 30141108 - 30141214
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  30141108 gaatcgtttcaaacaagtcctattgttgatagcatagttggtaattgcttcattgaactcatctttggtatcaaatctggctcttaacacccacttaaaa 30141207  T
Q  279 ttagtca 285  Q
    |||||||    
T  30141208 ttagtca 30141214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 30467003 - 30467109
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  30467003 gaatcgtttcaaacaagttctattgtagatagcatagttggtaatttcttccttgaactcatctttggtaccaaatctcgctcctaacacccatttaaaa 30467102  T
Q  279 ttagtca 285  Q
    |||||||    
T  30467103 ttagtca 30467109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 32318094 - 32317988
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  32318094 gaatcatttcaaacaagtcctattgtagataacatagttggtaattgcttcattgaactcatctttggtaccaaatctgtctcctaacacccacttaaaa 32317995  T
Q  279 ttagtca 285  Q
    |||||||    
T  32317994 ttagtca 32317988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 33693333 - 33693435
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  33693333 gaatcgtttcaaacaagtcctgttgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgattcctaacacccacttaaaa 33693432  T
Q  279 tta 281  Q
    |||    
T  33693433 tta 33693435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 44490460 - 44490354
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||     
T  44490460 gaatcgtttcaaacaagtcctattgtagatatcatagttggtaattgcttcattgaactcatctttggtaccaaatctgactcctaacacccacttaaag 44490361  T
Q  279 ttagtca 285  Q
    |||||||    
T  44490360 ttagtca 44490354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 48551764 - 48551870
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  48551764 gaatcgtttcaaacaagtcatattgtagatagcatggttggtaattgctttcttgaactcatctttggtacaaaatctgactcctaacacccacttaaaa 48551863  T
Q  279 ttagtca 285  Q
    |||||||    
T  48551864 ttagtca 48551870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 50542354 - 50542456
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  50542354 gaatcgttttaaacaaatcttattgtagatagcatagttggtaattgcttcattgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 50542453  T
Q  279 tta 281  Q
    |||    
T  50542454 tta 50542456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 51371047 - 51371153
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||||||||||||||    
T  51371047 gaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaattcatctttggtaccaaatctaactcctaacacccacttaaaa 51371146  T
Q  279 ttagtca 285  Q
    |||||||    
T  51371147 ttagtca 51371153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 32118854 - 32118753
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  32118854 aatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttcattgaactcatctttggtaccaaatctggctcctaacacccccttaaaat 32118755  T
Q  280 ta 281  Q
    ||    
T  32118754 ta 32118753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 9339123 - 9339232
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaac---tcatttttggtaccaaatctggctcctaacacccactta 275  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  9339123 gaatcatttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatcatatttggtaccaaatctggctcctaacacccactta 9339222  T
Q  276 aaattagtca 285  Q
    ||||||||||    
T  9339223 aaattagtca 9339232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 2055419 - 2055321
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaa 277  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  2055419 gaatcgtttcaaacaagtcatattgtagataacatagttgataattgcttccttaaactcatctttggtaccaaatctggctcctaacacccacttaaa 2055321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 39700186 - 39700080
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  39700186 gaatcgtttcaaacaagtcttattatagataacataattggtaattgtttccttgaactcatctttggtaccaaatctggctcttaacactcacttaaaa 39700087  T
Q  279 ttagtca 285  Q
    |||||||    
T  39700086 ttagtca 39700080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 39995167 - 39995269
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  39995167 gaatcgtttcaaacaagttctattgtagataacatagttggtaattgcttcattgaactcatctttggtaccaaatctggctcctaaaacccacttaaaa 39995266  T
Q  279 tta 281  Q
    |||    
T  39995267 tta 39995269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 48149640 - 48149538
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  48149640 gaatcgtttcaaacaagtcctaatgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctgacacccacttaaaa 48149541  T
Q  279 tta 281  Q
    |||    
T  48149540 tta 48149538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 15985151 - 15985051
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  15985151 gaatcgtttcaaacaagtcatattctagataacatagttggtaattgcttccttgaactcatctttagtaccaaatctggctcctaacacctacttaaaa 15985052  T
Q  279 t 279  Q
    |    
T  15985051 t 15985051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 24623268 - 24623189
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24623268 attgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaat 24623189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 22298659 - 22298553
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||| |||||| ||||||| |||| || |||||||||||||||||||||||||||||    
T  22298659 gaatcgtttcaaacaagccctattgtagatagcataattggtaattgtttccttaaactcatctttgatatcaaatctggctcctaacacccacttaaaa 22298560  T
Q  279 ttagtca 285  Q
    |||||||    
T  22298559 ttagtca 22298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 23553205 - 23553100
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  23553205 gaatcgtttcaaacaagtcatgttgtagatagcataattgttaattgcttccttgaactcatctttgataccaaatctggctcctaaca-ccacttaaaa 23553107  T
Q  279 ttagtca 285  Q
    |||||||    
T  23553106 ttagtca 23553100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 25730381 - 25730275
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| || ||||| | ||||||||| ||||||||||    
T  25730381 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgattccttgaactcatctttggcactaaatccgactcctaacatccacttaaaa 25730282  T
Q  279 ttagtca 285  Q
    |||||||    
T  25730281 ttagtca 25730275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 25734223 - 25734329
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  25734223 gaatcatttcaaacaagtcctattgtagataacatagttggtaattgcttaattgaactcatctttcgtaccaaatctgcctcctaacacccacttaaaa 25734322  T
Q  279 ttagtca 285  Q
    |||||||    
T  25734323 ttagtca 25734329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 17993017 - 17993123
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||  || ||||| |||||| ||||||||||||||||    
T  17993017 gaatcgtttcaaacaagtcctattgtaaatagcatagttggtaattgcttccttaaactcatcttttctatcaaatttggctcttaacacccacttaaaa 17993116  T
Q  279 ttagtca 285  Q
    |||||||    
T  17993117 ttagtca 17993123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 20534306 - 20534225
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggct 260  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  20534306 gaatcgtttcaaacaagtcctattgttgatagcatagttggtaattgcttctttgaactcatctttggtaccaaatctggct 20534225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 19168816 - 19168901
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||| ||||||||||||||||| |||||    
T  19168816 attgtagatagcatagttggtaattgcttccttgaactcatctttggtatcaaatttgactcataacacccacttaaaatcagtca 19168901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 42549643 - 42549722
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||| ||||||||||||||||||| ||||||| || |||||||| |||| ||||||||||||||||||||||||    
T  42549643 attgtagataacatagttggtaattgcttcattgaacttatctttggtactaaatttggctcctaacacccacttaaaat 42549722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 56555203 - 56555246
Alignment:
Q  242 tttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  56555203 tttggtaccaaatctggctcctgacacccacttaaaattagtca 56555246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 7e-49; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 38446617 - 38446511
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38446617 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 38446518  T
Q  279 ttagtca 285  Q
    |||||||    
T  38446517 ttagtca 38446511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 1687792 - 1687686
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  1687792 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 1687693  T
Q  279 ttagtca 285  Q
    |||||||    
T  1687692 ttagtca 1687686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 21656659 - 21656553
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21656659 gaatcgtttcaaacaagtcctattgtatatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 21656560  T
Q  279 ttagtca 285  Q
    |||||||    
T  21656559 ttagtca 21656553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 31122803 - 31122697
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  31122803 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaagacccgcttaaaa 31122704  T
Q  279 ttagtca 285  Q
    |||||||    
T  31122703 ttagtca 31122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 35346471 - 35346577
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  35346471 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtacaaaatctggctcctaacacccacttaaaa 35346570  T
Q  279 ttagtca 285  Q
    |||||||    
T  35346571 ttagtca 35346577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 1017185 - 1017079
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||    
T  1017185 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgtctcataacacccacttaaaa 1017086  T
Q  279 ttagtca 285  Q
    |||||||    
T  1017085 ttagtca 1017079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 20086314 - 20086420
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20086314 gaatcgtttcaaacaagtcctattatagatagcatacttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 20086413  T
Q  279 ttagtca 285  Q
    |||||||    
T  20086414 ttagtca 20086420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 20760071 - 20760177
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  20760071 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacatccacttaaaa 20760170  T
Q  279 ttagtca 285  Q
    |||||||    
T  20760171 ttagtca 20760177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 20813441 - 20813547
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20813441 gaatcgtttcaaacaagtcataatgtagatagcataattggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 20813540  T
Q  279 ttagtca 285  Q
    |||||||    
T  20813541 ttagtca 20813547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 21564637 - 21564531
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  21564637 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtatcaaatatggctcctaacacccacttaaaa 21564538  T
Q  279 ttagtca 285  Q
    |||||||    
T  21564537 ttagtca 21564531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 27070739 - 27070845
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||    
T  27070739 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctgcctcctaacactcacttaaaa 27070838  T
Q  279 ttagtca 285  Q
    |||||||    
T  27070839 ttagtca 27070845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 33151837 - 33151731
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  33151837 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactaatctttggtaccaaatctggctcctaacacccacttaaaa 33151738  T
Q  279 ttagtca 285  Q
    |||||||    
T  33151737 ttagtca 33151731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 41251027 - 41250921
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  41251027 gaattgtttcaaacaagtcttattgtagatagcatagttggtaattgtttccttgaactcatctttggtaccaaatctggctcctaacactcacttaaaa 41250928  T
Q  279 ttagtca 285  Q
    |||||||    
T  41250927 ttagtca 41250921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 42017014 - 42016908
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  42017014 gaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttcattgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 42016915  T
Q  279 ttagtca 285  Q
    |||||||    
T  42016914 ttagtca 42016908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 47329175 - 47329281
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47329175 gaatcgtttccaacaagtcatatcgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 47329274  T
Q  279 ttagtca 285  Q
    |||||||    
T  47329275 ttagtca 47329281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 40922165 - 40922269
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  40922165 gaatcgtttcaaacaagtcgtattgtagatagcatagttggtaattacttccttgaactcatctttggtaccaaatctggctcctaacatccacttaaaa 40922264  T
Q  279 ttagt 283  Q
    |||||    
T  40922265 ttagt 40922269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 26455723 - 26455617
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  26455723 gaatcgtttcaaacaagtcatgttgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatttggttcctaacacccacttaaaa 26455624  T
Q  279 ttagtca 285  Q
    |||||||    
T  26455623 ttagtca 26455617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 32650820 - 32650926
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32650820 gaatcatttcaaacaagttctattatagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 32650919  T
Q  279 ttagtca 285  Q
    |||||||    
T  32650920 ttagtca 32650926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 37248097 - 37247991
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  37248097 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttcattgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 37247998  T
Q  279 ttagtca 285  Q
    |||||||    
T  37247997 ttagtca 37247991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 44798408 - 44798306
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  44798408 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctttcttgaactcatctttggtaccgaatctggctcctaacacccacttaaaa 44798309  T
Q  279 tta 281  Q
    |||    
T  44798308 tta 44798306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 50287707 - 50287601
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||| |||||||||||||||||||||||    
T  50287707 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttcattaaactcatatttggtaccaaatttggctcctaacacccacttaaaa 50287608  T
Q  279 ttagtca 285  Q
    |||||||    
T  50287607 ttagtca 50287601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 21890311 - 21890205
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  21890311 gaatcgtttcaaacaagtcctattatagataacatatttggtaattgcttccttgaactcatctttggtaccaaatctagctcctaacacccacttaaaa 21890212  T
Q  279 ttagtca 285  Q
    |||||||    
T  21890211 ttagtca 21890205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 36314972 - 36315078
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||    
T  36314972 gaattgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttagtatcaaatctggctcttaacacccacttaaaa 36315071  T
Q  279 ttagtca 285  Q
    |||||||    
T  36315072 ttagtca 36315078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 42107099 - 42107205
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  42107099 gaatcgtttcaaacaagtcctattgtagatagtatagttggtaattacttccttgaactcatctttgacaccaaatctggctcctaacacccacttaaaa 42107198  T
Q  279 ttagtca 285  Q
    |||||||    
T  42107199 ttagtca 42107205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 22852131 - 22852031
Alignment:
Q  185 tttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtc 284  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  22852131 tttcaaataagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtactaaatatggctcctaacacccacttaaaattagtc 22852032  T
Q  285 a 285  Q
    |    
T  22852031 a 22852031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 179 - 283
Target Start/End: Complemental strand, 53196155 - 53196051
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  53196155 gaatcgtttcaaagaagtcttattgtagataacatagttggtaattatttccttgaactcatctttggtaccaaatctcgctcctaacacccacttaaaa 53196056  T
Q  279 ttagt 283  Q
    |||||    
T  53196055 ttagt 53196051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 3697287 - 3697181
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  3697287 gaatcctttcaaacaagtcctattgtagatagtatagttggtaattgcttcattgaattcatctttggtaccaaatctcgctcctaacacccacttaaaa 3697188  T
Q  279 ttagtca 285  Q
    |||||||    
T  3697187 ttagtca 3697181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 12748524 - 12748426
Alignment:
Q  187 tcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||    
T  12748524 tcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgttttctaacacccacttaaaattagtca 12748426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 20913754 - 20913860
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  20913754 gaatcgtttcaaacaagttctattgtagatagcatagttgataattgcttctttgaactcatctttggtaccaaatatggctcctaacatccacttaaaa 20913853  T
Q  279 ttagtca 285  Q
    |||||||    
T  20913854 ttagtca 20913860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 20921872 - 20921978
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  20921872 gaatcgtttcaaacaagttctattgtagatagcatagttgataattgcttctttgaactcatctttggtaccaaatatggctcctaacatccacttaaaa 20921971  T
Q  279 ttagtca 285  Q
    |||||||    
T  20921972 ttagtca 20921978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 48651389 - 48651287
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| |||||||||||||||||    
T  48651389 gaatcgtttcaaacaagtcctaatgtagatagcatagttggtaattgcttccttaaactcatctttgataccaaatctggcttctaacacccacttaaaa 48651290  T
Q  279 tta 281  Q
    |||    
T  48651289 tta 48651287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 51562303 - 51562197
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  || |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  51562303 gaatcgtttcaaacaagttctaatgtagataacatagttggtaattgtttccttgaactcatctttggtaccaaatctgcctcctaacacccacttaaaa 51562204  T
Q  279 ttagtca 285  Q
    |||||||    
T  51562203 ttagtca 51562197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 19664677 - 19664576
Alignment:
Q  184 gtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagt 283  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||||| |||||||||||||||    
T  19664677 gtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctgactcataacatccacttaaaattagt 19664578  T
Q  284 ca 285  Q
    ||    
T  19664577 ca 19664576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 10618480 - 10618586
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||  |||| |||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  10618480 gaatcgtttcaaacaagtcctattgtagatgacataattggtaattgcttcattgaactcatctttggtatcaaatctgactcctaacacccacttaaaa 10618579  T
Q  279 ttagtca 285  Q
    |||||||    
T  10618580 ttagtca 10618586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 35608131 - 35608237
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| | |||||||||||||||||||     
T  35608131 gaatcgtttcaaataagtcctattgtagatagcataattggtaattggttccttgaactcatctttggtaccaaatcggactcctaacacccacttaaac 35608230  T
Q  279 ttagtca 285  Q
    |||||||    
T  35608231 ttagtca 35608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 53925979 - 53926085
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||| ||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| || ||||||||||||||||||||    
T  53925979 gaatcatttcaaataagtcatattgtagatagtatagttggtaattgcttcattgaactcatctttggtaccaaatatgactcctaacacccacttaaaa 53926078  T
Q  279 ttagtca 285  Q
    |||||||    
T  53926079 ttagtca 53926085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 55164115 - 55164221
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| |||| || |||||||||||||||||||| ||||||||    
T  55164115 gaattgtttcaaataagtcatattgtagatagcatagttgctaattgcttccttgaactcatctttgatatcaaatctggctcctaacacctacttaaaa 55164214  T
Q  279 ttagtca 285  Q
    |||||||    
T  55164215 ttagtca 55164221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 29677616 - 29677515
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||| ||| ||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  29677616 aatcgtttcaaacaggtcctatcgtagatatcatagtttgtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccatttaaaat 29677517  T
Q  280 ta 281  Q
    ||    
T  29677516 ta 29677515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 39069867 - 39069761
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||  |||||||||||| |||||| |||||| |||| || |||||||||||||||||||| ||||||||||||||||    
T  39069867 gaatcgtttcaaacaagtcatattgttaatagcatagttgataattgtttcctttaacttatctttggtaccaaatctggctcttaacacccacttaaaa 39069768  T
Q  279 ttagtca 285  Q
    |||||||    
T  39069767 ttagtca 39069761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 52821049 - 52821155
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||| ||||||||| | ||||||||| ||||||||||||||||||| |||||||||| |||||||  ||| ||||||||||||||||||||||||    
T  52821049 gaatcgttttaaacaagtcctgttgtagataacatagttggtaattgcttctttgaactcatctttggtagtaaaactggctcctaacacccacttaaaa 52821148  T
Q  279 ttagtca 285  Q
    |||||||    
T  52821149 ttagtca 52821155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 50977984 - 50977899
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  50977984 attgtagatagcatagttggtagttgcttccttgaactcatctttggtaccaaatctggctcctaacgcccacttaaaatcagtca 50977899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 51081116 - 51081031
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  51081116 attgtagatagcatagttggtagttgcttccttgaactcatctttggtaccaaatctggctcctaacgcccacttaaaatcagtca 51081031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 1448735 - 1448838
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| ||||| ||||||   || |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  1448735 gaatcgtttcaaagaagtcctattgt---taccatagttggtaattgcttccttgaactcatctttagtatcaaatctggctcctaacacccacttaaaa 1448831  T
Q  279 ttagtca 285  Q
    |||||||    
T  1448832 ttagtca 1448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 19268630 - 19268556
Alignment:
Q  211 catagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19268630 catagttggtaattgcttcattgaactcatctttggtaccaaatctggctcctaacacccacttaaaattagtca 19268556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 33473239 - 33473345
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||  | || ||||||||||||||||| | ||||||| |||||||||    
T  33473239 gaatcgtttcaaacaagttttattgtagataacatagttggtaattgtttccttgattttatctttggtaccaaatctggtttctaacacgcacttaaaa 33473338  T
Q  279 ttagtca 285  Q
    |||||||    
T  33473339 ttagtca 33473345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 51475267 - 51475352
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||| |||||    
T  51475267 attgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctgcctcataacacccacttaaaatcagtca 51475352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 45380260 - 45380366
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttgg-taattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaa 277  Q
    ||||||||||||||||||  ||||||||||||||||||| | |||||||||| || ||||||| |||||||||||||||||||| ||||| |||||||||    
T  45380260 gaatcgtttcaaacaagttctattgtagatagcatagtttgataattgcttctttaaactcatctttggtaccaaatctggctcataaca-ccacttaaa 45380358  T
Q  278 attagtca 285  Q
    ||||||||    
T  45380359 attagtca 45380366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 50364908 - 50364987
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  50364908 attgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatttggctcctaacactcacttaaaat 50364987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 34019580 - 34019501
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    ||||||||||||||||||| ||||||||| |||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  34019580 attgtagatagcatagttgataattgcttacttgaactcactgttggtaccaaatctgactcctaacacccacttaaaat 34019501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 42641199 - 42641278
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||| |||||  ||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  42641199 attgtatatagccaagttggtaattgcttccttgaactcatctttggtaccaagtctgcctcctaacacccacttaaaat 42641278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 38923998 - 38924100
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| ||| |||||||  |||||||||||||||||| ||||||| || |||||||||||||  | ||||||||| ||||||||||    
T  38923998 gaattgtttcaaacaagtcctatcgtagataaaatagttggtaattgcttcgttgaacttatctttggtaccaaattggactcctaacatccacttaaaa 38924097  T
Q  279 tta 281  Q
    |||    
T  38924098 tta 38924100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 28699798 - 28699720
Alignment:
Q  207 atagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||| |||| | ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |||||    
T  28699798 atagcttagtagataattgcttccttgaactcatctttggcaccaaatctgactcctaacacccacttaaaatcagtca 28699720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 44152777 - 44152739
Alignment:
Q  243 ttggtaccaaatctggctcctaacacccacttaaaatta 281  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  44152777 ttggtaccaaatctgactcctaacacccacttaaaatta 44152739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 44152814 - 44152772
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggta 221  Q
    ||||||||||||||||||| |||| |||||| |||||||||||    
T  44152814 gaatcgtttcaaacaagtcatattatagataacatagttggta 44152772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 7e-49; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 16246193 - 16246299
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16246193 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 16246292  T
Q  279 ttagtca 285  Q
    |||||||    
T  16246293 ttagtca 16246299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 33865267 - 33865373
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33865267 gaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 33865366  T
Q  279 ttagtca 285  Q
    |||||||    
T  33865367 ttagtca 33865373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 921163 - 921057
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  921163 gaatcgtttcaaacaagtcctattgtagatagcatagttgataattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 921064  T
Q  279 ttagtca 285  Q
    |||||||    
T  921063 ttagtca 921057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 27328725 - 27328619
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  27328725 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 27328626  T
Q  279 ttagtca 285  Q
    |||||||    
T  27328625 ttagtca 27328619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 28650426 - 28650532
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28650426 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaatttcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 28650525  T
Q  279 ttagtca 285  Q
    |||||||    
T  28650526 ttagtca 28650532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 17134369 - 17134264
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  17134369 aatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaag 17134270  T
Q  280 tagtca 285  Q
    ||||||    
T  17134269 tagtca 17134264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 771981 - 772081
Alignment:
Q  185 tttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtc 284  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  771981 tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaattagtc 772080  T
Q  285 a 285  Q
    |    
T  772081 a 772081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 9276715 - 9276612
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  9276715 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatttggctcctaacacccacttaaaa 9276616  T
Q  279 ttag 282  Q
    ||||    
T  9276615 ttag 9276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 2057067 - 2056961
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  2057067 gaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatccagctcctaacacccacttaaaa 2056968  T
Q  279 ttagtca 285  Q
    |||||||    
T  2056967 ttagtca 2056961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 2314975 - 2315081
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  2314975 gaattgtttcaaacaagtcttattgtagatagcatagttggtaattgtttccttgaactcatctttggtaccaaatctggctcctaacactcacttaaaa 2315074  T
Q  279 ttagtca 285  Q
    |||||||    
T  2315075 ttagtca 2315081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 37838438 - 37838332
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37838438 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaactcatctttgataccaaatctggctcctaacacccacttaaaa 37838339  T
Q  279 ttagtca 285  Q
    |||||||    
T  37838338 ttagtca 37838332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 40854750 - 40854644
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  40854750 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtatcaaatctggctcctaacatccacttaaaa 40854651  T
Q  279 ttagtca 285  Q
    |||||||    
T  40854650 ttagtca 40854644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 41500502 - 41500608
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  41500502 gaatcgtttcaaacaagtcctattgtacatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccgcttaaaa 41500601  T
Q  279 ttagtca 285  Q
    |||||||    
T  41500602 ttagtca 41500608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 7379104 - 7378999
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7379104 gaatcgtttcaaacaagtcataatgtagatagaatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 7379005  T
Q  279 ttagtc 284  Q
    ||||||    
T  7379004 ttagtc 7378999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 11949426 - 11949532
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| |    
T  11949426 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatctttggtaccaaatctgactcctaacacccacttaata 11949525  T
Q  279 ttagtca 285  Q
    |||||||    
T  11949526 ttagtca 11949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 19180562 - 19180457
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  19180562 gaatcgtttcaaacaagtcttattgtagatagtatagttagtaattgcttccttgaactcatctttggtaccaaatctggct-ctaacacccacttaaaa 19180464  T
Q  279 ttagtca 285  Q
    |||||||    
T  19180463 ttagtca 19180457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 33106969 - 33107075
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  33106969 gaatcgtttcaaacgagtcctattgtagatatcatagttggtaattgcttccttgaactcatctttggtaccaaatatggctcctaacacccacttaaaa 33107068  T
Q  279 ttagtca 285  Q
    |||||||    
T  33107069 ttagtca 33107075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 34253283 - 34253177
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| |    
T  34253283 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctttcttgaactcatctttggtatcaaatctggctcctaacacccacttaata 34253184  T
Q  279 ttagtca 285  Q
    |||||||    
T  34253183 ttagtca 34253177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 37732193 - 37732299
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  37732193 gaatcgtttcaaacaagtcttattgtaaataacatagttggtaattgctttcttgaactcatttttggtatcaaatctgactcctaacacccacttaaaa 37732292  T
Q  279 ttagtca 285  Q
    |||||||    
T  37732293 ttagtca 37732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 36444229 - 36444334
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  36444229 aatcgtttcaaacaagtcctatagtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcataacacctacttaaaat 36444328  T
Q  280 tagtca 285  Q
    ||||||    
T  36444329 tagtca 36444334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 3430631 - 3430730
Alignment:
Q  186 ttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  3430631 ttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctggctcataacacccacttaaaattagtca 3430730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 1106559 - 1106665
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  1106559 gaatcatttcaaataagtcctattgtagatagcataattggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 1106658  T
Q  279 ttagtca 285  Q
    |||||||    
T  1106659 ttagtca 1106665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 2456151 - 2456045
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||||||||||    
T  2456151 gaattgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatttaactcctaacacccacttaaaa 2456052  T
Q  279 ttagtca 285  Q
    |||||||    
T  2456051 ttagtca 2456045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 7297234 - 7297340
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||  | ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  7297234 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgtcttcttgaactcatctttggtaccaaatctagctcctaacacccacttaaaa 7297333  T
Q  279 ttagtca 285  Q
    |||||||    
T  7297334 ttagtca 7297340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 8899822 - 8899717
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  8899822 gaatcgtttcaa-caagtcatattgtagatagcatagttggtaattgcttccatgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 8899724  T
Q  279 ttagtca 285  Q
     ||||||    
T  8899723 ctagtca 8899717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 17484550 - 17484656
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||| ||||||||||    
T  17484550 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaactcatctttggtaccaaatttgactcctaacaaccacttaaaa 17484649  T
Q  279 ttagtca 285  Q
    |||||||    
T  17484650 ttagtca 17484656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 2094410 - 2094516
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||| |||| ||||||| |||||||||||||||    
T  2094410 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactaatctttgatactaaatttggctccaaacacccacttaaaa 2094509  T
Q  279 ttagtca 285  Q
    |||||||    
T  2094510 ttagtca 2094516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 12759750 - 12759855
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||||||    
T  12759750 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatttttcgtaccaaatttgcct-ctaacacccacttaaaa 12759848  T
Q  279 ttagtca 285  Q
    |||||||    
T  12759849 ttagtca 12759855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 25087796 - 25087902
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  25087796 gaattgtttcaaacaagtcttattgtatataacatagttgataattgcttccttgaactcatctctggtactaaatctggctcctaacacccacttaaaa 25087895  T
Q  279 ttagtca 285  Q
    |||||||    
T  25087896 ttagtca 25087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 14630755 - 14630663
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacaccca 271  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  14630755 gaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatttggctcctaacaccca 14630663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 42630103 - 42629997
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||  ||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  42630103 gaatcgtttcaaacaagtcctatcatagatagcataattgataattgctttcttgaactcatctttggtaccaaatctggcttctaacacccacttaaaa 42630004  T
Q  279 ttagtca 285  Q
    |||||||    
T  42630003 ttagtca 42629997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 43249412 - 43249518
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||| |||||||| |||||  |||||||||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  43249412 gaatcgtttcgaacaagtcctattgatgatagcatagttggtaattgtttccttgaatacatctttggtaccaaatctggctcctaacacccacttaaaa 43249511  T
Q  279 ttagtca 285  Q
    |||||||    
T  43249512 ttagtca 43249518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 36211182 - 36211081
Alignment:
Q  184 gtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagt 283  Q
    |||||||||||||| |||| |||||| ||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  36211182 gtttcaaacaagtcctattctagataacatagtttgtaattgcttctttgaactcatctttggtaccaaatctgactcctaacacccacttaaaattagt 36211083  T
Q  284 ca 285  Q
    ||    
T  36211082 ca 36211081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 38751188 - 38751087
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| |||||||||||    
T  38751188 aatcgtttcaaacaagtcctaatgtagatagtatagttggtaattgcttccttgaactcatctttggtatcaaatgtggctcctaacatccacttaaaat 38751089  T
Q  280 ta 281  Q
    ||    
T  38751088 ta 38751087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 23671811 - 23671901
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacc 269  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23671811 gaatcgtttcaaacaagtcttattatagataacatggttggtaattgcttccttgaactcatctttggtactaaatctggctcctaacacc 23671901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 29737889 - 29737783
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| | ||| ||||||    
T  29737889 gaattgtttcaaacaagtcctattgtcgatagcatagttgataattgcttccttgaactcatctttggtaccaaatctgactcctaagatccatttaaaa 29737790  T
Q  279 ttagtca 285  Q
    |||||||    
T  29737789 ttagtca 29737783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 45124260 - 45124158
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| ||||||| |||||| | ||| ||||||||||||||||    
T  45124260 gaatcgtttcaaacaaatcttattgtagatagcatagttggtaattgtttccttaaactcatctttggtatcaaatcagactcttaacacccacttaaaa 45124161  T
Q  279 tta 281  Q
    |||    
T  45124160 tta 45124158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 8396572 - 8396657
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||    
T  8396572 attgtagatagcatagttgataattgcttccttgaactcatctttggtaccaaatatggctcctaaaacccacttaaaatcagtca 8396657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 37654224 - 37654143
Alignment:
Q  204 tagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  37654224 tagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacatccacttaaaatcagtca 37654143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 19916008 - 19916084
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaa 276  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  19916008 attgtagatagcatagttggtaattggttccttgaactcatctttggtaccaaatctgactcctaacacccacttaa 19916084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 41178059 - 41178125
Alignment:
Q  219 gtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41178059 gtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaattagtca 41178125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 9331897 - 9331794
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||||||  ||  | || || |||||||||| ||||||||||||||||| ||| |    
T  9331897 gaatcgtttcaaacaagtcctattgtagatagtattgttggtaattgcttcccagatattatcttaggtaccaaatttggctcctaacacccacctaaga 9331798  T
Q  279 ttag 282  Q
    ||||    
T  9331797 ttag 9331794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 23767414 - 23767520
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23767414 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 23767513  T
Q  279 ttagtca 285  Q
    |||||||    
T  23767514 ttagtca 23767520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 49094711 - 49094817
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49094711 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 49094810  T
Q  279 ttagtca 285  Q
    |||||||    
T  49094811 ttagtca 49094817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 7553016 - 7553122
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7553016 gaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 7553115  T
Q  279 ttagtca 285  Q
    |||||||    
T  7553116 ttagtca 7553122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 12143213 - 12143107
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12143213 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 12143114  T
Q  279 ttagtca 285  Q
    |||||||    
T  12143113 ttagtca 12143107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 19315781 - 19315675
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  19315781 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgcctcctaacacccacttaaaa 19315682  T
Q  279 ttagtca 285  Q
    |||||||    
T  19315681 ttagtca 19315675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 41106157 - 41106051
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  41106157 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 41106058  T
Q  279 ttagtca 285  Q
    |||||||    
T  41106057 ttagtca 41106051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 46825672 - 46825566
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46825672 gaatcgtttcaaacaagtcctattgtagatagcataattggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 46825573  T
Q  279 ttagtca 285  Q
    |||||||    
T  46825572 ttagtca 46825566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 19274699 - 19274594
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19274699 aatcgtttcaaacaagtcctattgtagataacatagctggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 19274600  T
Q  280 tagtca 285  Q
    ||||||    
T  19274599 tagtca 19274594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 36781172 - 36781277
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36781172 gaatcgtttcaaacaagtcttattgtagatatcatagttggtaattgcttccttgaactcatctttggtaccaaatctggttcctaacacccacttaaaa 36781271  T
Q  279 ttagtc 284  Q
    ||||||    
T  36781272 ttagtc 36781277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 7651803 - 7651697
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  7651803 gaatcgtttcaaacaagtcatattgtagatagcatagttgataattgcttcattgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 7651704  T
Q  279 ttagtca 285  Q
    |||||||    
T  7651703 ttagtca 7651697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 25988271 - 25988377
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  25988271 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattggttccttgaactcatctttggtaccaaatctgcctcctaacacccacttaaaa 25988370  T
Q  279 ttagtca 285  Q
    |||||||    
T  25988371 ttagtca 25988377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 28425363 - 28425469
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  28425363 gaatcgtttcaaacaagtcctattgcagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaaaa 28425462  T
Q  279 ttagtca 285  Q
    |||||||    
T  28425463 ttagtca 28425469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 38473626 - 38473732
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38473626 gaatcgtttcaaacaagtcctattgtagatatcatagttggtaattgcttccttgaactcatctttggtaccaaatctggttcctaacacccacttaaaa 38473725  T
Q  279 ttagtca 285  Q
    |||||||    
T  38473726 ttagtca 38473732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 49814441 - 49814335
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49814441 gaatcgtttcaaataagtcatattctagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 49814342  T
Q  279 ttagtca 285  Q
    |||||||    
T  49814341 ttagtca 49814335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 16706011 - 16705905
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  16706011 gaatcgtttcaaacaagtcttattttagataacatagttggtaattgcttccttgaactcatctttggtaccaaatctggcgcctaaaacccacttaaaa 16705912  T
Q  279 ttagtca 285  Q
    |||||||    
T  16705911 ttagtca 16705905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 26070033 - 26069927
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  26070033 gaatcgtttcaaacaagtcatattgtagatatcatagttggtaattgtttccttgaactcatttttggtatcaaatccggctcctaacacccacttaaaa 26069934  T
Q  279 ttagtca 285  Q
    |||||||    
T  26069933 ttagtca 26069927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 26549529 - 26549423
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  26549529 gaatcgttttaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctggttcctaacacccacttaaaa 26549430  T
Q  279 ttagtca 285  Q
    |||||||    
T  26549429 ttagtca 26549423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 33674158 - 33674052
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  33674158 gaatcgtgtcaaacaagtcctattgtagatagcatagctggtaattgcttccttgaactcatctttcgtaccaaatctggctcctaacacccacttaaaa 33674059  T
Q  279 ttagtca 285  Q
    |||||||    
T  33674058 ttagtca 33674052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 36157678 - 36157783
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36157678 gaatcgtttcaaacaagtcctattgtagatagcataattgg-aattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 36157776  T
Q  279 ttagtca 285  Q
    |||||||    
T  36157777 ttagtca 36157783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 46051591 - 46051485
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  46051591 gaatcgtttcaaacaagtcctgttgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggttcctaacacccacttaaaa 46051492  T
Q  279 ttagtca 285  Q
     ||||||    
T  46051491 ctagtca 46051485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 48669396 - 48669502
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  48669396 gaatcgtttcaaacaagtcctattgtagatagcatagttggtgattgcttccttgaactcatctttggtaccaaatctgactcctaacatccacttaaaa 48669495  T
Q  279 ttagtca 285  Q
    |||||||    
T  48669496 ttagtca 48669502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 48802331 - 48802437
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||| ||||||||    
T  48802331 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttcattgaactcatctttggtatcaaatatggctcctaacacctacttaaaa 48802430  T
Q  279 ttagtca 285  Q
    |||||||    
T  48802431 ttagtca 48802437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 50690084 - 50689978
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  50690084 gaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttcattgaactcatctttggtaccaaatttggctcctaacacccacttaaaa 50689985  T
Q  279 ttagtca 285  Q
    |||||||    
T  50689984 ttagtca 50689978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 24204474 - 24204577
Alignment:
Q  182 tcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaatta 281  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| |    
T  24204474 tcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcgtctttggtaccaaatctggctcctaatacccacttaaaatga 24204573  T
Q  282 gtca 285  Q
    ||||    
T  24204574 gtca 24204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 5401011 - 5400905
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||    
T  5401011 gaatcttttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggtttctaacatccacttaaaa 5400912  T
Q  279 ttagtca 285  Q
    |||||||    
T  5400911 ttagtca 5400905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 9962892 - 9962786
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  9962892 gaatcgtttcaaacaagttctgttgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctagttcctaacacccacttaaaa 9962793  T
Q  279 ttagtca 285  Q
    |||||||    
T  9962792 ttagtca 9962786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 18892470 - 18892364
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||| ||||    
T  18892470 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaactcatctttgataccaaatctggcttctaacacccactgaaaa 18892371  T
Q  279 ttagtca 285  Q
    |||||||    
T  18892370 ttagtca 18892364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 23228194 - 23228300
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||    
T  23228194 gaatcgtttcaaacaagtactattgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacatccatttaaaa 23228293  T
Q  279 ttagtca 285  Q
    |||||||    
T  23228294 ttagtca 23228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 37217037 - 37216931
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||| ||||||||||||||||    
T  37217037 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatctttggtaccaactctagctcataacacccacttaaaa 37216938  T
Q  279 ttagtca 285  Q
    |||||||    
T  37216937 ttagtca 37216931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 43396816 - 43396710
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43396816 gaatcgtttcaaacaaatcctactgtagatagcagagttgataattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 43396717  T
Q  279 ttagtca 285  Q
    |||||||    
T  43396716 ttagtca 43396710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 50533523 - 50533418
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  50533523 aatcgtttcaaacaagtcctattatagataacatagttggtaattgcttcattgaactcatctttggtaccgaatctggctcctaacacccacttaaaat 50533424  T
Q  280 tagtca 285  Q
    ||||||    
T  50533423 tagtca 50533418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 6711581 - 6711478
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  6711581 gaatcgtttcaaacaagtcatattgtagacattatagttggtaattgcttccttgaactcatctttggtaccaaatctggcttctaacacccacttaaaa 6711482  T
Q  279 ttag 282  Q
    ||||    
T  6711481 ttag 6711478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 45350717 - 45350821
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||  | ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  45350717 gaatcgtttcaaacaa--cctattgtagataacatagttggtaattgcttccttgatctcatctttggtaccaaatctggctcctaacacccacttaaaa 45350814  T
Q  279 ttagtca 285  Q
    |||||||    
T  45350815 ttagtca 45350821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 7608766 - 7608872
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  7608766 gaatcgtttcaaacaagtcctattatagatagcatagttgataattgcttctttgaactcatcttttgtaccaaatctgcctcctaacacccacttaaaa 7608865  T
Q  279 ttagtca 285  Q
    |||||||    
T  7608866 ttagtca 7608872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 33325868 - 33325762
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||| ||||||||||||    
T  33325868 gaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttaaactcatctttggtatcaaatctggcttctaagacccacttaaaa 33325769  T
Q  279 ttagtca 285  Q
    |||||||    
T  33325768 ttagtca 33325762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 46095075 - 46095181
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| || |||||||| ||||||||| ||||||||||    
T  46095075 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaactcatctttgatatcaaatctgtctcctaacatccacttaaaa 46095174  T
Q  279 ttagtca 285  Q
    |||||||    
T  46095175 ttagtca 46095181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 198 - 285
Target Start/End: Complemental strand, 9974964 - 9974877
Alignment:
Q  198 ttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  9974964 ttattgtagatagcatagttggtaattgcttccttgaactcatttttggtactaaatatggctcgtaacacccacttaaaattagtca 9974877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 9878784 - 9878890
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||| ||| || |||||||||||||||||||    
T  9878784 gaatcgtttcaaacaagtcatattgtagataaaatagttggtaattgcttccttgaactcatctttagtaccatatcgggttcctaacacccacttaaaa 9878883  T
Q  279 ttagtca 285  Q
    |||||||    
T  9878884 ttagtca 9878890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 33194672 - 33194757
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  33194672 attgtagatagcatagttggtagttgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaatcagtca 33194757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 41982237 - 41982341
Alignment:
Q  181 atcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaatt 280  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||| |||| |||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  41982237 atcgtttcaaacaagtcatattgtagataacatagttgataattacttctttgaactcatctttggtaccaaatctgactcctaacacccatttaaaatt 41982336  T
Q  281 agtca 285  Q
    |||||    
T  41982337 agtca 41982341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 21929667 - 21929554
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaac-------tcatttttggtaccaaatctggctcctaacaccca 271  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||| |||||    
T  21929667 gaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaactcatctttcatctttggtaccaaatctggctcctaaaaccca 21929568  T
Q  272 cttaaaattagtca 285  Q
    ||||||||||||||    
T  21929567 cttaaaattagtca 21929554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 45670486 - 45670592
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagtt-ggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaa 277  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||| |||||||||    
T  45670486 gaatcgtttcaaacaagtcctattgtagataacatagtttggtaattgcttccttgaactcatctttggtaccaaatctgattcctaaca-ccacttaaa 45670584  T
Q  278 attagtca 285  Q
    ||||||||    
T  45670585 attagtca 45670592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 8141486 - 8141592
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||| || ||||||||||| |||||||||| ||| |||||||||||| ||  ||||||||||||||||    
T  8141486 gaatcgtttcaaacaagtcctattgtagatagcataatttgtaattgcttctttgaactcatctttagtaccaaatctgacttgtaacacccacttaaaa 8141585  T
Q  279 ttagtca 285  Q
    |||||||    
T  8141586 ttagtca 8141592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 21965206 - 21965100
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||  |||| |||||||||||||| || ||||||| |||||||||||||||| ||||| ||||||||||||||    
T  21965206 gaatcgtttcaaacaagtcctattgtagatgacataattggtaattgcttcattaaactcatctttggtaccaaatctgactccttacacccacttaaaa 21965107  T
Q  279 ttagtca 285  Q
    |||||||    
T  21965106 ttagtca 21965100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 34971221 - 34971115
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || |||||||| ||||||||||||||| ||| |||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  34971221 gaatcgtttcaaacaagtcctaatgtagataacatagttggtaattgtttctttgaactcatatttggtatcaaatctgactcctaacactcacttaaaa 34971122  T
Q  279 ttagtca 285  Q
    |||||||    
T  34971121 ttagtca 34971115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 52067651 - 52067753
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| | |||||||| ||||| || ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  52067651 gaatcgtttcaaacaagtcatgttgtagatggcataatttgtaattgcttccttgaactcatcgttggtaccaaatctgactcctaacacccacttaaaa 52067750  T
Q  279 tta 281  Q
    |||    
T  52067751 tta 52067753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 52147134 - 52147032
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| | ||||| ||||||||||| ||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  52147134 gaatcgtttcaaacaagtcatgttgtatatagcatagtttgtaattgcttcattgaactcatctttggtatcaaatctggttcctaacacccacttaaaa 52147035  T
Q  279 tta 281  Q
    |||    
T  52147034 tta 52147032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 52349924 - 52350030
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||  || ||||| |||||| ||||||||||||||||    
T  52349924 gaatcgtttcaaacaagtcctattgtaaatagcatagttggtaattgcttccttaaactcatcttttctatcaaatttggctcttaacacccacttaaaa 52350023  T
Q  279 ttagtca 285  Q
    |||||||    
T  52350024 ttagtca 52350030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 48319067 - 48319152
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  48319067 attgtatatagcatagttggtaattgcttccttgaactcatctttggtactaaatctggctcctaacacccacttaaaatcagtca 48319152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 30281751 - 30281675
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaa 276  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  30281751 attgtagatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctgactcctaacacccacttaa 30281675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 16506809 - 16506888
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  16506809 attgtagatagcatagttggtaattgcttccttgaactcaaccttggtaccaaatctggctcctaacacccacttaaaat 16506888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 12964750 - 12964681
Alignment:
Q  216 ttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12964750 ttggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaattagtca 12964681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 18917664 - 18917559
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    ||||||||||||||| || |||||||||||||||| ||  |||||||||||||||| | || ||||||||||||| || |||||||||||||||||||||    
T  18917664 aatcgtttcaaacaaatcatattgtagatagcatatttaataattgcttccttgaatttatctttggtaccaaatatgactcctaacacccacttaaaat 18917565  T
Q  280 tagtca 285  Q
    ||||||    
T  18917564 tagtca 18917559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 40721484 - 40721392
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacaccca 271  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||| |||||    
T  40721484 gaatcgtttccaacaagtcctattgtagatagcatagttgataattgctttcttgaactcatctttgataccaaatctggctcctaataccca 40721392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 17983898 - 17984004
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||| |||||| || |||| ||| ||||||| ||||||||||| |||||||||| ||||||||||||||||  || ||||||||||||||||    
T  17983898 gaatcgtttcaaccaagtcctaatgtaaataacatagtttgtaattgcttctttgaactcatctttggtaccaaatctgattcataacacccacttaaaa 17983997  T
Q  279 ttagtca 285  Q
    |||||||    
T  17983998 ttagtca 17984004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 18782089 - 18782195
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||| ||||||||||||| |||| ||||||||||||||| |||||||||  |||||||||| |||||||| |||||||| || || |||||||||||||    
T  18782089 gaatcatttcaaacaagtcatattctagatagcatagttgataattgcttatttgaactcatctttggtacaaaatctggttcatagcacccacttaaaa 18782188  T
Q  279 ttagtca 285  Q
    |||||||    
T  18782189 ttagtca 18782195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 44978768 - 44978868
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    |||||||||||||||||||  | ||||||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||| | ||||||||||    
T  44978768 gaatcgtttcaaacaagtcagaatgtagatagcataattgataattgcttccttgaacttatctttggtaccaaatctggctcctaata-ccacttaaaa 44978866  T
Q  279 tt 280  Q
    ||    
T  44978867 tt 44978868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 33714361 - 33714451
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacc 269  Q
    |||||||||||||||| || ||||||||||| |||||||| |||||| |||||||||||||| |||| ||||||||||| |||||||||||    
T  33714361 gaatcgtttcaaacaaatcctattgtagataacatagttgataattgtttccttgaactcatctttgataccaaatctgactcctaacacc 33714451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 25800782 - 25800679
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcat----ttttggtaccaaatctggctcctaacacccactt 274  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||     |||||||||||||||      ||||||||||||    
T  25800782 gaatcgtttcaaacaagtcttattgtagataacat-gttggtaattgcttccttgaactcatcttaatttggtaccaaatct------taacacccactt 25800690  T
Q  275 aaaattagtca 285  Q
    |||||||||||    
T  25800689 aaaattagtca 25800679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 255 - 149
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  255 gaatcgtttcaaacaagtcctaatgtagatagcatagtcggtaattgcttccttgaactcatctttggtaccaaatctggctcctaacacccacttaaaa 156  T
Q  279 ttagtca 285  Q
    |||||||    
T  155 ttagtca 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 219027 - 218920
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaaca-cccacttaaa 277  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  219027 gaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactcatctttgataccaaatctggctcctaacaccccacttaaa 218928  T
Q  278 attagtca 285  Q
    ||||||||    
T  218927 attagtca 218920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 252438 - 252544
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  252438 gaatcgtttcaaacaagtcctattgtatatagcatagttggtaattgcttcattgaactcatttttcgtaccaaatctggctcctaacacccagttaaaa 252537  T
Q  279 ttagtca 285  Q
    |||||||    
T  252538 ttagtca 252544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 5027 - 5133
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  5027 gaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgttttcttgaactcatctttggtaccaaatatggctcctaacaccctcttaaaa 5126  T
Q  279 ttagtca 285  Q
    |||||||    
T  5127 ttagtca 5133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 5326 - 5221
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  5326 gaatcgtttcaaacaagtcatgttgtagatagcataattgttaattgcttccttgaactcatctttgataccaaatctggctcctaaca-ccacttaaaa 5228  T
Q  279 ttagtca 285  Q
    |||||||    
T  5227 ttagtca 5221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 13236 - 13134
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||| |||||||| | ||||||||||    
T  13236 gaatcgtttcaaacaagtcatattgtagatagcataattgataattccttccttgaactcatctttggtaccaaatctagctcctaatatccacttaaaa 13137  T
Q  279 tta 281  Q
    |||    
T  13136 tta 13134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 48103 - 47997
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||| |||||||||  |||||| ||  |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  48103 gaatcgttttaaacaagtccgattgtatatcacatagttggtaattgcttccttgaactcacctttggtaccaaatctggttcctaacacccacttaaaa 48004  T
Q  279 ttagtca 285  Q
    |||||||    
T  48003 ttagtca 47997  T

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Target: scaffold0078 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 59608 - 59710
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaa 278  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||| |||||||| | ||||||||||    
T  59608 gaatcgtttcaaacaagtcatattgtagatagcataattgataattccttccttgaactcatctttggtaccaaatctagctcctaatatccacttaaaa 59707  T
Q  279 tta 281  Q
    |||    
T  59708 tta 59710  T

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Target: scaffold0542 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 1994 - 2079
Alignment:
Q  200 attgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaattagtca 285  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||    
T  1994 attgtagatagcatagttggtaattgcttccttgaactcatctttggtaccgaatctggctcctaacacctacttaaaatcagtca 2079  T

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Target: scaffold0122 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 11498 - 11393
Alignment:
Q  180 aatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggctcctaacacccacttaaaat 279  Q
    |||||||| ||| ||| | |||||||| ||||||||||||||||||||||||| |||| || | ||||||||||||||||||||||||||||||||||||    
T  11498 aatcgttttaaataagacctattgtaggtagcatagttggtaattgcttccttaaacttatctatggtaccaaatctggctcctaacacccacttaaaat 11399  T
Q  280 tagtca 285  Q
    ||||||    
T  11398 tagtca 11393  T

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Target: scaffold1562 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 680 - 599
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggct 260  Q
    ||||||||||||||||||| || |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  680 gaatcgtttcaaacaagtcctaatgttaatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggct 599  T

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Target: scaffold1158 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 1913 - 1994
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggct 260  Q
    ||||||||||||||||||| || |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1913 gaatcgtttcaaacaagtcctaatgttaatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggct 1994  T

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Target: scaffold0952 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 3371 - 3452
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggct 260  Q
    ||||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3371 gaatcgtttcaaataagtcctaatgttgatagcatagttggtaattgcttccttgaactcatctttggtaccaaatctggct 3452  T

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Target: scaffold0717 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 1958 - 1877
Alignment:
Q  179 gaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaactcatttttggtaccaaatctggct 260  Q
    ||||||||||||||||||| || ||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  1958 gaatcgtttcaaacaagtcctaatgttgatagcatagttgataattgcttccttgacctcatctttggtaccaaatctggct 1877  T

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