View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3235_low_8 (Length: 269)

Name: NF3235_low_8
Description: NF3235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3235_low_8
NF3235_low_8
[»] chr1 (48 HSPs)
chr1 (56-250)||(41924-42114)
chr1 (56-206)||(15884221-15884372)
chr1 (54-230)||(25061219-25061395)
chr1 (54-230)||(7826311-7826487)
chr1 (119-232)||(35569157-35569270)
chr1 (119-230)||(20800234-20800345)
chr1 (76-230)||(31223389-31223543)
chr1 (119-230)||(1199885-1199996)
chr1 (102-227)||(4347014-4347139)
chr1 (56-230)||(42850176-42850350)
chr1 (81-187)||(47085853-47085959)
chr1 (76-212)||(25230022-25230157)
chr1 (54-230)||(48510901-48511077)
chr1 (121-232)||(40352451-40352561)
chr1 (56-230)||(43728835-43729008)
chr1 (1-58)||(41741-41798)
chr1 (76-232)||(10470605-10470760)
chr1 (119-202)||(40229455-40229538)
chr1 (62-233)||(47123387-47123558)
chr1 (126-232)||(13056062-13056168)
chr1 (76-233)||(5410655-5410811)
chr1 (120-229)||(29438642-29438750)
chr1 (117-214)||(49242955-49243052)
chr1 (56-232)||(26058236-26058412)
chr1 (54-189)||(4369801-4369935)
chr1 (126-232)||(13344838-13344943)
chr1 (62-204)||(43730027-43730169)
chr1 (77-230)||(50406146-50406299)
chr1 (54-230)||(6166103-6166278)
chr1 (76-212)||(27801627-27801763)
chr1 (94-233)||(47981750-47981889)
chr1 (120-230)||(50977297-50977407)
chr1 (163-232)||(29441286-29441355)
chr1 (126-195)||(32365144-32365213)
chr1 (77-230)||(34718467-34718620)
chr1 (117-213)||(11023304-11023399)
chr1 (56-213)||(45710044-45710200)
chr1 (178-230)||(7765241-7765293)
chr1 (178-229)||(10659690-10659741)
chr1 (130-189)||(11561891-11561950)
chr1 (97-140)||(48002414-48002457)
chr1 (62-152)||(13855673-13855762)
chr1 (80-154)||(23628739-23628812)
chr1 (56-205)||(6464603-6464751)
chr1 (119-204)||(12468270-12468354)
chr1 (163-232)||(30557636-30557704)
chr1 (177-229)||(4369776-4369828)
chr1 (164-204)||(42137088-42137128)
[»] chr8 (56 HSPs)
chr8 (54-228)||(31246273-31246447)
chr8 (76-231)||(15206695-15206850)
chr8 (54-230)||(3467510-3467686)
chr8 (76-232)||(440143-440299)
chr8 (56-229)||(35615688-35615861)
chr8 (56-212)||(28425446-28425602)
chr8 (119-232)||(22936747-22936860)
chr8 (63-232)||(33626988-33627157)
chr8 (62-233)||(8702361-8702531)
chr8 (56-213)||(25697933-25698089)
chr8 (56-205)||(41289039-41289188)
chr8 (121-202)||(30081635-30081715)
chr8 (56-228)||(27649725-27649896)
chr8 (77-213)||(42143337-42143473)
chr8 (56-210)||(3097182-3097336)
chr8 (62-204)||(26490918-26491060)
chr8 (128-233)||(30759258-30759363)
chr8 (121-226)||(36779435-36779539)
chr8 (119-232)||(38114487-38114599)
chr8 (54-202)||(3619053-3619200)
chr8 (77-204)||(24897570-24897696)
chr8 (56-202)||(6399092-6399238)
chr8 (4-58)||(42600282-42600336)
chr8 (119-204)||(25497734-25497818)
chr8 (55-231)||(24297547-24297722)
chr8 (54-205)||(40742276-40742425)
chr8 (119-229)||(36121502-36121611)
chr8 (121-202)||(1836125-1836205)
chr8 (77-202)||(22552724-22552849)
chr8 (119-172)||(43550933-43550986)
chr8 (121-205)||(26243168-26243252)
chr8 (119-187)||(40742166-40742234)
chr8 (62-233)||(14382178-14382339)
chr8 (4-58)||(31246618-31246673)
chr8 (126-229)||(35550270-35550372)
chr8 (120-202)||(29970845-29970926)
chr8 (56-205)||(38152156-38152304)
chr8 (121-213)||(4941754-4941846)
chr8 (147-227)||(32597863-32597943)
chr8 (121-189)||(39219765-39219833)
chr8 (130-202)||(40792188-40792259)
chr8 (56-112)||(42600508-42600564)
chr8 (56-204)||(44926820-44926967)
chr8 (177-232)||(2071537-2071592)
chr8 (163-230)||(3465396-3465463)
chr8 (125-172)||(10552923-10552970)
chr8 (102-172)||(19649210-19649281)
chr8 (167-230)||(44926945-44927008)
chr8 (163-204)||(26575904-26575945)
chr8 (130-187)||(42600974-42601031)
chr8 (54-202)||(8124948-8125095)
chr8 (117-204)||(10368053-10368139)
chr8 (164-204)||(11071139-11071179)
chr8 (165-205)||(24776480-24776519)
chr8 (121-189)||(37667055-37667122)
chr8 (178-230)||(39219807-39219859)
[»] chr7 (42 HSPs)
chr7 (56-232)||(42752132-42752308)
chr7 (56-232)||(39634106-39634282)
chr7 (54-232)||(3622401-3622579)
chr7 (76-205)||(48459722-48459851)
chr7 (76-232)||(37562582-37562738)
chr7 (53-207)||(3750675-3750829)
chr7 (56-229)||(3342782-3342955)
chr7 (126-212)||(10371919-10372005)
chr7 (117-207)||(38230121-38230211)
chr7 (56-213)||(39391097-39391254)
chr7 (56-205)||(44967367-44967516)
chr7 (126-231)||(37639492-37639597)
chr7 (56-229)||(40903112-40903284)
chr7 (56-202)||(386452-386597)
chr7 (77-226)||(2839304-2839452)
chr7 (56-229)||(41715649-41715822)
chr7 (119-211)||(47021974-47022066)
chr7 (120-231)||(34365924-34366035)
chr7 (56-230)||(34010332-34010504)
chr7 (56-209)||(3375482-3375635)
chr7 (126-227)||(20088931-20089032)
chr7 (126-227)||(47217487-47217588)
chr7 (56-212)||(32186932-32187088)
chr7 (126-202)||(46541662-46541738)
chr7 (126-213)||(12632043-12632130)
chr7 (126-189)||(38494278-38494341)
chr7 (121-231)||(39977609-39977719)
chr7 (4-58)||(42752483-42752537)
chr7 (77-205)||(24770879-24771007)
chr7 (121-193)||(42740449-42740521)
chr7 (163-226)||(16353527-16353589)
chr7 (126-205)||(36920146-36920225)
chr7 (163-232)||(43186537-43186605)
chr7 (126-202)||(12964660-12964736)
chr7 (76-172)||(33746401-33746497)
chr7 (133-213)||(43631656-43631736)
chr7 (92-187)||(1766453-1766548)
chr7 (126-212)||(37008312-37008397)
chr7 (163-204)||(25472150-25472191)
chr7 (97-174)||(32205958-32206035)
chr7 (117-173)||(40561699-40561755)
chr7 (142-210)||(48176771-48176839)
[»] chr4 (85 HSPs)
chr4 (54-230)||(54488559-54488735)
chr4 (56-230)||(38305967-38306141)
chr4 (56-232)||(14564100-14564276)
chr4 (119-235)||(39187753-39187869)
chr4 (54-213)||(29149280-29149439)
chr4 (54-213)||(42944871-42945030)
chr4 (76-230)||(19592187-19592341)
chr4 (116-236)||(41866170-41866290)
chr4 (119-229)||(6138577-6138687)
chr4 (119-205)||(16566324-16566410)
chr4 (119-229)||(26651805-26651915)
chr4 (54-212)||(39636739-39636897)
chr4 (119-205)||(55638736-55638822)
chr4 (54-187)||(48550426-48550559)
chr4 (56-205)||(51922896-51923045)
chr4 (62-202)||(13167487-13167627)
chr4 (54-230)||(46830025-46830201)
chr4 (62-233)||(54150488-54150659)
chr4 (56-202)||(6505157-6505303)
chr4 (142-232)||(53532019-53532109)
chr4 (56-213)||(9893667-9893824)
chr4 (121-230)||(15603381-15603490)
chr4 (119-232)||(43772077-43772190)
chr4 (56-213)||(43781492-43781648)
chr4 (119-211)||(49519749-49519841)
chr4 (54-189)||(4954048-4954183)
chr4 (56-230)||(48550173-48550347)
chr4 (56-229)||(14072459-14072631)
chr4 (127-227)||(22694556-22694656)
chr4 (102-189)||(22699743-22699831)
chr4 (102-189)||(22980699-22980787)
chr4 (102-189)||(22994286-22994374)
chr4 (77-229)||(25312692-25312844)
chr4 (116-187)||(15619630-15619701)
chr4 (119-230)||(32238015-32238125)
chr4 (126-205)||(33574204-33574283)
chr4 (121-203)||(14054872-14054954)
chr4 (133-230)||(48556585-48556683)
chr4 (76-230)||(523130-523280)
chr4 (81-234)||(14075996-14076148)
chr4 (76-189)||(16492905-16493016)
chr4 (126-227)||(28947708-28947809)
chr4 (121-226)||(39993574-39993679)
chr4 (119-212)||(46926067-46926160)
chr4 (133-213)||(54153077-54153157)
chr4 (117-189)||(54487217-54487289)
chr4 (177-233)||(54683465-54683521)
chr4 (163-230)||(1616523-1616589)
chr4 (120-239)||(5025549-5025667)
chr4 (96-187)||(26454960-26455051)
chr4 (62-189)||(26824215-26824342)
chr4 (133-232)||(28987051-28987150)
chr4 (56-111)||(48257059-48257114)
chr4 (56-202)||(13183034-13183180)
chr4 (4-58)||(38305747-38305801)
chr4 (119-205)||(48407679-48407764)
chr4 (56-202)||(49136478-49136624)
chr4 (76-189)||(3652653-3652765)
chr4 (177-230)||(36150666-36150719)
chr4 (97-174)||(56241847-56241924)
chr4 (164-204)||(16202532-16202572)
chr4 (163-230)||(4649885-4649952)
chr4 (119-230)||(38740259-38740369)
chr4 (126-189)||(46958049-46958112)
chr4 (177-232)||(48550396-48550451)
chr4 (163-213)||(9889308-9889358)
chr4 (180-226)||(21691100-21691146)
chr4 (165-231)||(22605701-22605767)
chr4 (119-205)||(30842151-30842236)
chr4 (121-187)||(36150625-36150691)
chr4 (120-230)||(40286302-40286411)
chr4 (177-227)||(46958085-46958135)
chr4 (4-58)||(54488335-54488388)
chr4 (190-227)||(38305210-38305247)
chr4 (165-230)||(38768488-38768553)
chr4 (100-205)||(45779991-45780095)
chr4 (163-227)||(2326258-2326321)
chr4 (92-172)||(13862970-13863049)
chr4 (163-203)||(16202518-16202558)
chr4 (80-195)||(19599487-19599601)
chr4 (190-230)||(20191658-20191698)
chr4 (54-154)||(20191718-20191817)
chr4 (148-212)||(26426089-26426153)
chr4 (121-229)||(31520328-31520436)
chr4 (118-154)||(33560530-33560566)
[»] chr5 (43 HSPs)
chr5 (56-232)||(2483665-2483838)
chr5 (54-211)||(3667837-3667994)
chr5 (54-230)||(35760172-35760348)
chr5 (119-230)||(22482237-22482348)
chr5 (56-228)||(13253038-13253209)
chr5 (54-205)||(39987945-39988096)
chr5 (97-232)||(32030740-32030875)
chr5 (78-228)||(9275439-9275589)
chr5 (119-229)||(41834940-41835050)
chr5 (119-240)||(10058122-10058243)
chr5 (126-213)||(24045885-24045972)
chr5 (92-226)||(2694717-2694851)
chr5 (62-204)||(33467971-33468113)
chr5 (56-213)||(2430267-2430423)
chr5 (62-230)||(7178769-7178936)
chr5 (119-204)||(40495337-40495422)
chr5 (97-205)||(8049029-8049137)
chr5 (102-189)||(22811056-22811144)
chr5 (56-231)||(32454522-32454697)
chr5 (62-202)||(34106928-34107068)
chr5 (62-205)||(7385910-7386053)
chr5 (119-222)||(23914215-23914318)
chr5 (126-233)||(40885266-40885373)
chr5 (120-230)||(5710339-5710449)
chr5 (126-224)||(19784868-19784966)
chr5 (119-204)||(4292197-4292282)
chr5 (56-174)||(4569089-4569208)
chr5 (126-231)||(27021183-27021288)
chr5 (56-212)||(41740564-41740720)
chr5 (76-202)||(7714945-7715071)
chr5 (163-233)||(35847840-35847910)
chr5 (163-205)||(38265068-38265109)
chr5 (93-230)||(2861663-2861798)
chr5 (102-202)||(2868335-2868435)
chr5 (126-187)||(24036628-24036689)
chr5 (99-187)||(20068942-20069030)
chr5 (119-202)||(33953883-33953965)
chr5 (163-233)||(41741573-41741643)
chr5 (165-230)||(4295625-4295690)
chr5 (178-231)||(19203957-19204010)
chr5 (120-205)||(40791048-40791132)
chr5 (120-205)||(42146357-42146441)
chr5 (165-233)||(41039488-41039556)
[»] chr2 (44 HSPs)
chr2 (78-227)||(34433263-34433413)
chr2 (56-223)||(18511082-18511249)
chr2 (62-232)||(3853886-3854056)
chr2 (54-229)||(2213484-2213659)
chr2 (76-231)||(9988454-9988609)
chr2 (54-229)||(28127242-28127417)
chr2 (119-230)||(1944993-1945104)
chr2 (62-229)||(25747837-25748003)
chr2 (56-229)||(39141425-39141597)
chr2 (56-212)||(7472646-7472801)
chr2 (120-227)||(1763264-1763370)
chr2 (76-229)||(3602415-3602567)
chr2 (97-230)||(12110895-12111027)
chr2 (121-202)||(31224725-31224806)
chr2 (56-204)||(16467066-16467214)
chr2 (54-230)||(28261272-28261448)
chr2 (126-210)||(30007527-30007611)
chr2 (119-231)||(36312320-36312431)
chr2 (119-230)||(5916196-5916306)
chr2 (102-189)||(23359925-23360013)
chr2 (121-233)||(42089479-42089591)
chr2 (133-213)||(42515947-42516027)
chr2 (97-207)||(2213668-2213778)
chr2 (119-233)||(2215295-2215409)
chr2 (78-202)||(26207911-26208035)
chr2 (78-230)||(30599858-30600010)
chr2 (119-230)||(8170356-8170466)
chr2 (77-232)||(28641643-28641798)
chr2 (119-230)||(44619015-44619126)
chr2 (56-202)||(7296135-7296281)
chr2 (76-226)||(11240671-11240820)
chr2 (120-230)||(36548243-36548353)
chr2 (119-204)||(45714648-45714733)
chr2 (76-232)||(43858164-43858320)
chr2 (114-189)||(9537076-9537151)
chr2 (119-202)||(14821206-14821288)
chr2 (121-187)||(27911451-27911517)
chr2 (133-211)||(31562660-31562738)
chr2 (77-203)||(41580691-41580817)
chr2 (117-202)||(32502027-32502111)
chr2 (62-203)||(38600424-38600565)
chr2 (126-202)||(34997218-34997294)
chr2 (117-172)||(28206765-28206820)
chr2 (164-233)||(7474196-7474265)
[»] scaffold0005 (1 HSPs)
scaffold0005 (56-232)||(253099-253275)
[»] chr6 (22 HSPs)
chr6 (76-230)||(1312395-1312549)
chr6 (63-232)||(5584003-5584171)
chr6 (54-229)||(10826060-10826235)
chr6 (119-210)||(17829974-17830065)
chr6 (126-227)||(699598-699698)
chr6 (56-231)||(33898960-33899135)
chr6 (62-202)||(16121985-16122125)
chr6 (82-233)||(21254832-21254982)
chr6 (56-230)||(6208019-6208192)
chr6 (56-230)||(13739177-13739350)
chr6 (56-230)||(13744677-13744850)
chr6 (123-213)||(29399766-29399855)
chr6 (119-187)||(16442349-16442417)
chr6 (126-230)||(3605708-3605811)
chr6 (56-212)||(29409225-29409381)
chr6 (119-174)||(16548173-16548228)
chr6 (138-203)||(21455933-21455998)
chr6 (121-232)||(26274581-26274691)
chr6 (62-189)||(29682144-29682271)
chr6 (163-230)||(15151461-15151528)
chr6 (104-172)||(10874222-10874290)
chr6 (163-211)||(16540241-16540288)
[»] chr3 (55 HSPs)
chr3 (56-233)||(10334109-10334286)
chr3 (119-232)||(50664792-50664905)
chr3 (54-229)||(26519633-26519808)
chr3 (76-228)||(34561099-34561251)
chr3 (56-227)||(45423728-45423898)
chr3 (82-241)||(49526614-49526773)
chr3 (119-210)||(55154536-55154626)
chr3 (76-230)||(38172263-38172417)
chr3 (56-229)||(10853224-10853397)
chr3 (120-205)||(23496352-23496437)
chr3 (54-231)||(52966764-52966941)
chr3 (120-236)||(44225600-44225715)
chr3 (56-231)||(30811487-30811661)
chr3 (119-233)||(4984615-4984729)
chr3 (119-213)||(23207041-23207135)
chr3 (56-205)||(35425305-35425453)
chr3 (54-229)||(53074872-53075046)
chr3 (1-58)||(16075373-16075429)
chr3 (77-229)||(14651060-14651210)
chr3 (56-212)||(20813117-20813272)
chr3 (121-224)||(42644298-42644401)
chr3 (76-230)||(48189398-48189551)
chr3 (56-213)||(3348214-3348371)
chr3 (121-202)||(19877453-19877534)
chr3 (56-233)||(44939369-44939544)
chr3 (119-187)||(31084241-31084309)
chr3 (121-229)||(38340841-38340949)
chr3 (120-202)||(21023201-21023281)
chr3 (56-202)||(8424714-8424859)
chr3 (120-230)||(15511332-15511442)
chr3 (56-233)||(16246049-16246224)
chr3 (92-198)||(29716674-29716780)
chr3 (120-189)||(7012675-7012744)
chr3 (119-212)||(35930772-35930865)
chr3 (126-189)||(10852710-10852773)
chr3 (120-227)||(25181245-25181351)
chr3 (77-231)||(42475701-42475855)
chr3 (62-187)||(30809944-30810069)
chr3 (102-189)||(23918858-23918946)
chr3 (121-205)||(40415277-40415361)
chr3 (119-230)||(38125398-38125508)
chr3 (119-202)||(42318364-42318446)
chr3 (163-225)||(8802116-8802177)
chr3 (119-233)||(21225024-21225138)
chr3 (130-224)||(23526249-23526342)
chr3 (160-214)||(35058180-35058233)
chr3 (163-204)||(21261221-21261261)
chr3 (133-174)||(30736172-30736213)
chr3 (82-139)||(32861828-32861885)
chr3 (77-230)||(44224754-44224907)
chr3 (163-232)||(52813293-52813362)
chr3 (119-172)||(52931586-52931639)
chr3 (120-172)||(25848067-25848119)
chr3 (119-195)||(53179882-53179958)
chr3 (177-233)||(54963154-54963210)
[»] scaffold0172 (1 HSPs)
scaffold0172 (97-231)||(15213-15346)
[»] scaffold0041 (1 HSPs)
scaffold0041 (56-229)||(46734-46906)
[»] scaffold0007 (1 HSPs)
scaffold0007 (56-202)||(29107-29252)
[»] scaffold0394 (1 HSPs)
scaffold0394 (134-205)||(5811-5882)
[»] scaffold0369 (1 HSPs)
scaffold0369 (119-202)||(8483-8566)
[»] scaffold0014 (1 HSPs)
scaffold0014 (92-203)||(118393-118504)
[»] scaffold0020 (1 HSPs)
scaffold0020 (97-187)||(138507-138597)
[»] scaffold0217 (1 HSPs)
scaffold0217 (56-233)||(1980-2157)
[»] scaffold0168 (1 HSPs)
scaffold0168 (165-210)||(32058-32103)
[»] scaffold0184 (1 HSPs)
scaffold0184 (160-232)||(7355-7426)
[»] scaffold0983 (1 HSPs)
scaffold0983 (126-213)||(2241-2328)
[»] scaffold0381 (1 HSPs)
scaffold0381 (163-213)||(9188-9238)


Alignment Details
Target: chr1 (Bit Score: 161; Significance: 6e-86; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 56 - 250
Target Start/End: Original strand, 41924 - 42114
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||||| |||||||||||    
T  41924 aaaataaattttgatccaagctatccaaacaacgtgaatttataagaatcacttttgtcttaat---tc-aaacataaatcaattcacgttcaactcacc 42019  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaacctctttaggagcattt 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42020 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattttctccaccgcagaatcaaacacacactaaacctctttaggagcattt 42114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 15884221 - 15884372
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaat-gtatctaaacataaatcaattcacattcaactcac 154  Q
    ||||| |||||||||| || ||||||||||||| ||||||||||| ||||||||||  ||| || ||||| |||||||||||||||||||| ||||||||    
T  15884221 aaaatcaattttgatccaaactatccaaacaacatgaatttataaaaatcactttttactttattgtatccaaacataaatcaattcacatccaactcac 15884320  T
Q  155 cttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctct 206  Q
     ||| || ||||||||||||  |||| |||| | ||||||||||||||||||    
T  15884321 ttttaaccaaaatcaattctgtcaaactcaactctatcaaaatcaattctct 15884372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 25061219 - 25061395
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  ||  |||||||||| | | |||| ||||||||||||||| | |||| ||||| ||||||||||||||| |  |||||||||    
T  25061219 ttaaaatcaattttgattcaaattatccaaacatcatcaattgataagaatcacttttatgttaaggtatccaaacataaatcaatttatgttcaactca 25061318  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | ||| || ||||||||||| | |||||||||||||| ||||||||||| |   |||||||||| ||||||||||||    
T  25061319 cttttaaccaaaatcaattcaaccaaaatcaattttaacaaaatcaatttttgtcaccgcagaaccaaacacacact 25061395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 230
Target Start/End: Complemental strand, 7826487 - 7826311
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||| | |||| |||||||||||||||   | |  ||| | ||||||||||||||||||||  | ||||    
T  7826487 ttaaaatcaattttgattcaacctatccaaacaacatcaattcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaagctca 7826388  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | ||| || ||||||||||||  ||||||||||| |||||||||||||| ||||||||||  || ||||||||||||    
T  7826387 cttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattttctccaccgccaaaccaaacacacact 7826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 35569270 - 35569157
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||  ||||||||||| ||||||||||||||||| || ||||   |     
T  35569270 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccatac 35569171  T
Q  219 caaacacacactaa 232  Q
    ||||||||||||||    
T  35569170 caaacacacactaa 35569157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 20800345 - 20800234
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||  ||||||||||| ||||||||||||||||| || ||||   |     
T  20800345 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccatac 20800246  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  20800245 caaacacacact 20800234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 76 - 230
Target Start/End: Original strand, 31223389 - 31223543
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || | ||||||||||||| | |   | |||||| |||||||||||||||||||| |||||||| ||| || ||||||||||||     
T  31223389 ctatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 31223488  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
     |||| |||||| ||| ||||||||||||| |||||||  || ||||||||||||    
T  31223489 tcaaactcaattctattaaaatcaattctccccaccgccaaaccaaacacacact 31223543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 1199885 - 1199996
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||| ||||||  |||| |||||| ||||||||||||||||| |||||||   |     
T  1199885 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctcgccaccgccatac 1199984  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  1199985 caaacacacact 1199996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 4347014 - 4347139
Alignment:
Q  102 aatcacttttgtctt-aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaa 200  Q
    |||||||||||| || || ||||| |||||||||||| || ||||||||||||| ||| || |||||||||||| |||||||||||| || |||||||||    
T  4347014 aatcacttttgttttgaaggtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct-acaaaatcaattctaccaaaatcaa 4347112  T
Q  201 ttctctccaccgcagaatcaaacacac 227  Q
    || | ||||||||| || |||||||||    
T  4347113 ttttttccaccgcacaaccaaacacac 4347139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 230
Target Start/End: Complemental strand, 42850350 - 42850176
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| |||  |||||||||||| | || | |||||||||||||||     | |||||| |||||||||||||||||||| ||||||||     
T  42850350 aaaatcaattttgatgtaaaatatccaaacaacatcaactcataagaatcacttttaaggaagtgtatccaaacataaatcaattcacatccaactcact 42850251  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||| || |||||||||||    ||| |||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  42850250 tttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 42850176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 47085853 - 47085959
Alignment:
Q  81 caaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaa 180  Q
    |||| ||| ||||||||||||||| ||||||   || ||  ||||||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||    
T  47085853 caaataacatgaatttataagaataacttttacatttataaatctaaacataaatcaattcacattcaactcacttttaattaaaatcaattctatcaaa 47085952  T
Q  181 atcaatt 187  Q
    |||||||    
T  47085953 atcaatt 47085959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 25230022 - 25230157
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || | ||||||||||||| | |   | |||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||     
T  25230022 ctatccaaacaacatcaactaataagaatcacttctattaaagtgtatccaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctc 25230120  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccg 212  Q
     |||| ||| || ||||||||||||||||| ||||||    
T  25230121 tcaaactcagttctatcaaaatcaattctcgccaccg 25230157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 48510901 - 48511077
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  |  |||| |||||||| | |||| |||||||||||||||     | |||||| ||||||||||||||||||||||||||||    
T  48510901 ttaaaatcaattttgatacatactattcaaacaacatcaattcataagaatcacttttaagcaagtgtatccaaacataaatcaattcacattcaactca 48511000  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | ||| || |||||||||| |  |||| ||||||  |||||||||||||||| || ||||   | ||||||||||||    
T  48511001 cttttaaccaaaatcaattatctcaaactcaattcaatcaaaatcaattctcgccgccgccataccaaacacacact 48511077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 40352451 - 40352561
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||| |||||||||||| || ||||| ||||||| ||| || ||||||||||| | ||||||||||| |||||||||||||||||  ||||||| || ||    
T  40352451 tatccaaacataaatcactttacattaaactcacttttaaccaaaatcaattcca-caaaatcaattctatcaaaatcaattctcctcaccgcacaacca 40352549  T
Q  221 aacacacactaa 232  Q
    ||||||||||||    
T  40352550 aacacacactaa 40352561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 230
Target Start/End: Complemental strand, 43729008 - 43728835
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||   | | | |||| |||||||| ||||||||||| ||||||||     
T  43729008 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcact 43728910  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||| |  ||||||||||||  |||| |||||| ||||||||||||||||||||| |||   | ||||||||||||    
T  43728909 tttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattctctccatcgctataccaaacacacact 43728835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41741 - 41798
Alignment:
Q  1 cataatttggtaagtaatgagttaaaaaattaatataatatatctaactaagattaaa 58  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41741 cataatttgttaagtaatgagttaaaaaattaatataatatatctaactaaaattaaa 41798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 232
Target Start/End: Original strand, 10470605 - 10470760
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || | ||||||||||||| |||     |||||| |||||||| |||||| ||||||||||||| ||| |  ||||||||||||     
T  10470605 ctatccaaacaacatcaactcataagaatcacttctgttaacgtgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctc 10470703  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
     |||| |||||| ||||||||||||||||| |||||||   | ||||||||||||||    
T  10470704 tcaaactcaattctatcaaaatcaattctcgccaccgccctaccaaacacacactaa 10470760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 40229538 - 40229455
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||| |||||||||||||||||| |  ||||||| ||| || ||||||||||| ||||||||||||| ||||||||||||||    
T  40229538 tgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattctatcaaaatcaatt 40229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 233
Target Start/End: Original strand, 47123387 - 47123558
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    ||||||||| |||  ||||||||||||   || |||||||||||||||||  |  | |||||| ||||| ||||||||||||||  ||||||| ||| |     
T  47123387 aattttgatttaatgtatccaaacaacaccaacttataagaatcacttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaat 47123486  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
     ||||||||||||  |||| |||||| |||||||||||||| |  |||||||   | |||||||||||||||    
T  47123487 caaaatcaattctctcaaactcaattctatcaaaatcaatttttgccaccgccataccaaacacacactaaa 47123558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 13056062 - 13056168
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    ||||||||||||||||||| ||||||||| ||| || ||||||||||||  |||| || ||| |||||||||||||| || |||||||   | |||||||    
T  13056062 aaacataaatcaattcacactcaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattatcgccaccgccataccaaacac 13056161  T
Q  226 acactaa 232  Q
    |||||||    
T  13056162 acactaa 13056168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 233
Target Start/End: Original strand, 5410655 - 5410811
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || | |||||||||||||||   | | |||||  ||||||||||||||| |||| |||||||| ||| |  ||||||||||||     
T  5410655 ctatccaaacaacatcaagtcataagaatcacttttaagt-agtgtattcaaacataaatcaatttacatccaactcacttttaatcaaaatcaattctt 5410753  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
     |||| |||||| ||||||||||||||||| || ||||  || |||||||||| ||||    
T  5410754 tcaaattcaattatatcaaaatcaattctcgccgccgccaaaccaaacacacattaaa 5410811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 29438642 - 29438750
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    |||| |||||||||| || || | ||| ||||||| ||| |  ||||||||||||  ||||||||||||||||| |||||||||||||||||||| | ||    
T  29438642 gtatataaacataaaccactttatattgaactcacttttcatcaaaatcaattctg-caaaatcaattttatcagaatcaattctctccaccgcaaattc 29438740  T
Q  220 aaacacacac 229  Q
    ||||||||||    
T  29438741 aaacacacac 29438750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 49243052 - 49242955
Alignment:
Q  117 aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgca 214  Q
    |||||||  |||||||||||||||||||| |||||||  ||| || ||||||||||||  |||| |||||| ||||||||| ||||||| ||||||||    
T  49243052 aatgtattcaaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaaattaattctcaccaccgca 49242955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 232
Target Start/End: Original strand, 26058236 - 26058412
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||| ||| || ||||||||||||| | |||| ||| |||| ||||||   | | || ||| ||||||||||||||| ||||  || ||||     
T  26058236 aaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaattcact 26058335  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||| |  ||||||||||||   |||||||||| ||||||||||||||||| |||||||   | ||||||||||||||    
T  26058336 tttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacacacactaa 26058412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 4369935 - 4369801
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||| | || | |||||||||||||||   | |  ||| | |||||||||||||||||||| |||||||    
T  4369935 ttaaaatcaattttgattcaacctatccaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacat-caactca 4369837  T
Q  154 ccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    | ||| || ||||||||||||  |||||||||||||    
T  4369836 cttttaaccaaaatcaattctctcaaaatcaatttt 4369801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 13344838 - 13344943
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    |||||||||||| || || |||||||||| ||| || |||||||||||| ||||||||||||  ||||||||||||| ||| ||||||  || |||||||    
T  13344838 aaacataaatcactttacgttcaactcacttttaaccaaaatcaattct-acaaaatcaattcaatcaaaatcaattatcttcaccgcccaaccaaacac 13344936  T
Q  226 acactaa 232  Q
    || ||||    
T  13344937 acgctaa 13344943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 204
Target Start/End: Complemental strand, 43730169 - 43730027
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    ||||||||||| | | ||||||||||  | |||| ||||||||||||| ||  | || ||||| ||||| ||||||||| ||| ||||||||| ||| ||    
T  43730169 aattttgatctcaaccatccaaacaaaataaattaataagaatcacttatgcataaaggtatccaaacacaaatcaattgacactcaactcacttttaac 43730070  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
     |||||||||| || |||||| |||||| | | ||||||||||    
T  43730069 caaaatcaattatatcaaaattaattttgttagaatcaattct 43730027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 50406146 - 50406299
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    ||||||||||||   || |||||||||||| ||||  |  | || ||| ||||| ||||||||||||||  ||||||| ||| |  |||||||| |||      
T  50406146 tatccaaacaacaacaacttataagaatcatttttaacgaagtgcatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaaatcttt 50406245  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    |||| |||||||||||||||||||||||| |||||||   | ||||||||||||    
T  50406246 caaactcaattttatcaaaatcaattctcgccaccgctataccaaacacacact 50406299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 6166103 - 6166278
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||| ||||||||| | || |  ||||||||||||||   | | |||||| |||||||| |||||||| ||  ||||||    
T  6166103 ttaaaatcaattttgattcaaactacccaaacaacatcaactcctaagaatcacttttaaatgagtgtatccaaacataa-tcaattcagatcaaactca 6166201  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | | | || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  6166202 cttctaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgcgataccaaacacacact 6166278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 27801763 - 27801627
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | |||| ||| |||| ||||||   | | || ||| ||||||||||||||| ||||  ||||||| ||| |  ||||||||||||     
T  27801763 ctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctc 27801664  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccg 212  Q
      |||||||||| ||||||||||||||||| ||||||    
T  27801663 ttaaaatcaattctatcaaaatcaattctcgccaccg 27801627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 47981889 - 47981750
Alignment:
Q  94 tttataagaatcacttttgtctt-aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatc 192  Q
    ||||||| |||||||| ||| || || ||||| |||||||||||| || | ||||||||||  ||| || ||||| |||| || |||||||||||||||     
T  47981889 tttataaaaatcacttctgttttgaaggtatccaaacataaatcactttaaattcaactcaattttaaccaaaattaatttta-caaaatcaattttatt 47981791  T
Q  193 aaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    |||||||||||||  |||| || || ||||||||| |||||    
T  47981790 aaaatcaattctcgtcaccacacaaccaaacacacgctaaa 47981750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 50977407 - 50977297
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| ||||||||| |||||||||   ||||||| ||| || ||||||||||||  |||| || ||| ||||||||||||||||| |||||||   | |    
T  50977407 gtatccaaacataaaacaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattctcgccaccgccatacc 50977308  T
Q  220 aaacacacact 230  Q
    |||||||||||    
T  50977307 aaacacacact 50977297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 29441286 - 29441355
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    |||||||||||   |||| |||||| ||||||||||||||||   |||||||||||||||||||||||||    
T  29441286 aaaatcaattcactcaaactcaattctatcaaaatcaattctactcaccgcagaatcaaacacacactaa 29441355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 32365144 - 32365213
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaa 195  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||| |   ||||||||||| ||||||    
T  32365144 aaacataaatcaatttacattcaactcacttttgactaaaatcaattattttaaaatcaatttgatcaaa 32365213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 34718467 - 34718620
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    ||||||||||||   |||| |||||||||||||||||   | |||||  ||||||||||||||| | ||  ||||||| ||| || ||||| |||| |      
T  34718467 tatccaaacaactataattcataagaatcacttttgtacaagtgtattcaaacataaatcaatttatatcaaactcacttttaaccaaaattaattatct 34718566  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    |||| |||||| |||||||||||||| | |||||||   || ||||||||||||    
T  34718567 caaactcaattctatcaaaatcaattttttccaccgtcaaaccaaacacacact 34718620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 11023399 - 11023304
Alignment:
Q  117 aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||||||| |||||||| ||||||||| |  ||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||| || |||||||    
T  11023399 aatgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgc 11023304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 45710044 - 45710200
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | ||||||||||||| |     | |||||  |||||||| ||||||||||| ||||||||     
T  45710044 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtattcaaacataa-tcaattcacatacaactcact 45710142  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||| |  |||||||||||   |||| |||||| |||||||||||||| || |||||||    
T  45710143 tttaatcaaaatcaattcactcaaactcaattctatcaaaatcaattatcgccaccgc 45710200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 7765293 - 7765241
Alignment:
Q  178 aaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    |||||||||| |||||||||||||||||  ||||||| || ||||||||||||    
T  7765293 aaaatcaattctatcaaaatcaattctcgtcaccgcataaccaaacacacact 7765241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 10659741 - 10659690
Alignment:
Q  178 aaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    |||||||||||||||| ||||||||||  ||||||| ||| |||||||||||    
T  10659741 aaaatcaattttatcataatcaattctaaccaccgcggaaccaaacacacac 10659690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 11561891 - 11561950
Alignment:
Q  130 ataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    ||||||||||||||||||||||||| ||| || ||||| ||||||  |||| ||||||||    
T  11561891 ataaatcaattcacattcaactcacttttaaccaaaattaattctttcaaactcaatttt 11561950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 48002457 - 48002414
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaatt 140  Q
    |||||||||||||||||  ||||||||| |||||||||||||||    
T  48002457 ataagaatcacttttgtggtaatgtatccaaacataaatcaatt 48002414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 13855762 - 13855673
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactc 152  Q
    |||||||||||||  ||||||||| || |||| | |||| |||||||||| | | |||| ||||||||||||| || || |||||||||||    
T  13855762 aattttgatctaaaatatccaaacgacatgaaatcataaaaatcacttttatttgaatgcatctaaacataaa-cattttacattcaactc 13855673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 23628812 - 23628739
Alignment:
Q  80 ccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcac 154  Q
    ||||||||| | |||| |||||||||| ||||   ||| |||||| ||||||||||||||| |||||||||||||    
T  23628812 ccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcac 23628739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 6464603 - 6464751
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | ||||||||||||| |     | |||||  |||||||| |||||||||||| |||||||     
T  6464603 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtataaaaacataa-tcaattcacattaaactcact 6464701  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||| || ||||| || ||   |||| |||||| |||||||||||||||||    
T  6464702 tttaaccaaaatgaactcactcaaactcaattatatcaaaatcaattctc 6464751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 12468270 - 12468354
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||| ||| ||||||||||| ||||  ||||||| ||| || |||||||||| || |||| |||||| |||| |||||||||||    
T  12468270 tgtatccaaatataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatc-aaatcaattct 12468354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 30557636 - 30557704
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||||||||||||| || |||||||| |||||||||||||||||  ||||||| ||  |||||||| ||||    
T  30557636 aaaatcaattcta-cagaatcaattctatcaaaatcaattctcctcaccgcacaactaaacacacgctaa 30557704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 4369828 - 4369776
Alignment:
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    ||||||||||| | |||||||||||| ||||||||||  || |||||||||||    
T  4369828 caaaatcaattctctcaaaatcaattttctccaccgccaaaccaaacacacac 4369776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 42137128 - 42137088
Alignment:
Q  164 aaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||||||||  ||||||||||||| ||||||||||||||    
T  42137128 aaatcaattctctcaaaatcaattttgtcaaaatcaattct 42137088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 228
Target Start/End: Complemental strand, 31246447 - 31246273
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||| ||| |||||||||||| |||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||    
T  31246447 ttaaaatcaattttgatccaagttatccaaacaacatgaatttataagaatcacttttgctttaaggtatccaaacataaatcaattcacattcaactca 31246348  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacaca 228  Q
    | ||| || ||||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||||    
T  31246347 cttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaacacaca 31246273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 15206695 - 15206850
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| ||||||| |||||||||||| |   | |||||||| ||||||||||||||||||||||||||||| |||  | |||||||||| |     
T  15206695 ctatccaaacaacatgaatttttaagaatcacttctaagtcaatgtatccaaacataaatcaattcacattcaactcacttttacccaaaatcaattttg 15206794  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
     |||| |||||| ||||||||| ||||||||||||| | ||| |||||||||||||    
T  15206795 tcaaactcaattctatcaaaattaattctctccaccactgaaccaaacacacacta 15206850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 3467510 - 3467686
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || |||||||| |||| | |||| |||||||||||||||   | ||| |||| ||||| ||||||||||||||||||||||    
T  3467510 ttaaaatcaattttgattcaaactatccaaccaacatcaattcataagaatcacttttaaataaatatatccaaacagaaatcaattcacattcaactca 3467609  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  3467610 cttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 3467686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 440299 - 440143
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||||| || | |||||||||| ||||  || |||||||| |||||||||||||||||||| |||||||| ||| || ||||||||||||     
T  440299 ctatccaaacaacgttaactcataagaatcatttttaactgaatgtatccaaacataaatcaattcacatccaactcacatttaaccaaaatcaattctc 440200  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
     || | |||||| |||||||||||||| ||||| |||   || ||||||||||||||    
T  440199 tcagactcaattctatcaaaatcaattatctccgccgtccaaccaaacacacactaa 440143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 35615688 - 35615861
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||| | || |||||||||||||  |||| | || |||||| ||||   | ||||||||||||||||||||||||| ||||||||||||     
T  35615688 aaaatcaattttgagccaaactatccaaacaacaagaatatttaggaatcaattttaagtgaatgtatctaaacataaatcaattcccattcaactcact 35615787  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    | || | |||||||||  |  |||| |||||| ||||||||||||||||||||||||| ||| |||||| ||||    
T  35615788 tctttccaaaatcaatcttgtcaaactcaattctatcaaaatcaattctctccaccgctgaaccaaacagacac 35615861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 28425602 - 28425446
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||||| || | ||||||||||||| |     | |||||| |||||||||||||||||| |  |||||||     
T  28425602 aaaatcaattttgattcaaactatccaaacaacgtcaactcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcact 28425503  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    ||| || ||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  28425502 tttaaccaaaatcaattctaacaaaatcaattctatcaaaatcaattttcgccaccg 28425446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 22936860 - 22936747
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||  |||| | |||| ||||||||||||||||| |||||||   |     
T  22936860 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattctcgccaccgccatac 22936761  T
Q  219 caaacacacactaa 232  Q
    ||||||||||||||    
T  22936760 caaacacacactaa 22936747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 232
Target Start/End: Complemental strand, 33627157 - 33626988
Alignment:
Q  63 attttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttact 162  Q
    ||||||||  || ||||||||||||| | || | |||||||||||||||     | |||||| ||||||||||||||||  || |||||||  ||| | |    
T  33627157 attttgattcaaactatccaaacaacattaactcataagaatcacttttagtaaagtgtatccaaacataaatcaattcttatccaactcagttttaaat 33627058  T
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||||||||||||  |||| |||||| ||||||||||||||| ||||||||| ||| ||||||||||||||    
T  33627057 aaaatcaattctttcaaactcaattctatcaaaatcaattccctccaccgccgaaccaaacacacactaa 33626988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 233
Target Start/End: Complemental strand, 8702531 - 8702361
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||||| | |||||||||||||||| |||||| ||||||||||||||     ||||||||| ||||||||||||||| |  ||||| |||  ||| ||    
T  8702531 aattttgacccaagctatccaaacaacatgaattgataagaatcactttaaggataatgtatccaaacataaatcaatt-atcttcaaatcatttttaac 8702433  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||||||||||| |   ||| |||||| |||||||||||||| | ||||||| |||| |||||| ||||||||    
T  8702432 taaaatcaattttgctaaagtcaattctatcaaaatcaattttatccaccgtagaaccaaacatacactaaa 8702361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 25698089 - 25697933
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||   | | | |||| |||||||| ||||||||||| ||||||||     
T  25698089 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcact 25697991  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||| |  ||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  25697990 tttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgc 25697933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 41289188 - 41289039
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | ||  ||||||||||||||||     | |||||| ||||||||||||||||||| |||||||||     
T  41289188 aaaatcaattttgattcaaactatccaaacaacatcaacctataagaatcacttttagtaaagtgtatccaaacataaatcaattcacaatcaactcact 41289089  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||| | |||||||||||||  |||| |||||| | |||||||||||||||    
T  41289088 tttaattaaaatcaattctctcaaactcaattctgtcaaaatcaattctc 41289039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 30081715 - 30081635
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||| |||||||||||||||||| || ||||||| ||| ||||||||||||| | |||||||||||||||||||||||||||    
T  30081715 tatccaaacataaatcaattcacttt-aactcacttttaactaaaatcaattttcacaaaatcaattttatcaaaatcaatt 30081635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 27649725 - 27649896
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||   | | ||||||||||||||  |||||||| || ||| ||||     
T  27649725 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaatgagtgtatctaaacatat-tcaattcatatccaaatcact 27649823  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacaca 228  Q
    ||| || ||||||||||||  |||| |||||| |||||||||||||||||  ||||||  || ||||||||||    
T  27649824 tttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgtcaccgcccaaccaaacacaca 27649896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 42143473 - 42143337
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    |||||||||||||| || | |||||||||||||||   | | | |||| |||||||||||||||||| |  ||||||| ||| ||||||||||||| |      
T  42143473 tatccaaacaacgtcaactcataagaatcacttttaaataagtttatccaaacataaatcaattcacctcaaactcacttttaactaaaatcaattttct 42143374  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||| |||||| ||||| ||||||||||| |||||||    
T  42143373 caaactcaattatatcataatcaattctcgccaccgc 42143337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 210
Target Start/End: Complemental strand, 3097336 - 3097182
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||   | | | |||| ||||||||||||||||| ||  |||||||     
T  3097336 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacataaatcaattcatatcaaactcact 3097237  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccac 210  Q
    ||| || ||||||||||||  |||| |||||| ||||||||| ||||||| ||||    
T  3097236 tttaaccaaaatcaattctctcaaactcaattctatcaaaattaattctcaccac 3097182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 204
Target Start/End: Original strand, 26490918 - 26491060
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||| |||| | ||||| ||||||  | |||| ||||||||||||| | | | || ||||| ||||| ||||||||| ||| ||||||||| ||| ||    
T  26490918 aatttttatctcaactatctaaacaaaataaattaataagaatcacttctatataaaggtatccaaacacaaatcaatttacactcaactcacttttaac 26491017  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
     ||||||||||||| |||||||||||||  || ||||||||||    
T  26491018 caaaatcaattctaccaaaatcaattttgacagaatcaattct 26491060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 30759363 - 30759258
Alignment:
Q  128 acataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacac 227  Q
    |||||||||||||||||| |||||||| ||| || ||||||||||||  |||| |||||| ||| ||||||||||||  ||| |||  || |||||||||    
T  30759363 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattatattaaaatcaattcttcccatcgccaaaccaaacacac 30759264  T
Q  228 actaaa 233  Q
    ||||||    
T  30759263 actaaa 30759258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 36779435 - 36779539
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||| |||||||||| | || ||||||||||||| ||| |  ||||||||||||| ||||||||||| |||||||||||||||||  ||||||| || ||    
T  36779435 tatccaaacataaattactttacattcaactcacttttaatcaaaatcaattcta-caaaatcaattatatcaaaatcaattctcgtcaccgcacaacca 36779533  T
Q  221 aacaca 226  Q
    ||||||    
T  36779534 aacaca 36779539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 38114487 - 38114599
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||| ||||||||||| ||||| || ||| || ||||||||||||  |||| |||||| ||||||||| ||||||| |||||||  ||     
T  38114487 tgtatccaaacataa-tcaattcacatccaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaataaattctcaccaccgccaaac 38114585  T
Q  219 caaacacacactaa 232  Q
    ||||||||||||||    
T  38114586 caaacacacactaa 38114599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 3619200 - 3619053
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||| |  ||| ||||||||||||||  | |||||||||| ||||| |||||||||  || ||||||||    
T  3619200 ttaaaatcaattttgattcaaactatccaaacaacatacattgataagaatcactttcatattaatgtatccaaacacaaatcaatt-tcactcaactca 3619102  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    | ||| |  | |||||||||   ||||||||||| ||||||||||||||    
T  3619101 cttttgatcagaatcaattcattcaaaatcaattctatcaaaatcaatt 3619053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 24897696 - 24897570
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    |||||||||||| | || | |||||||||| ||||   | |||||||| |||||||| ||| |||| || |||||||| ||| || |||||||||||| |    
T  24897696 tatccaaacaacatcaactcataagaatcaattttaaataaatgtatccaaacataattca-ttcatatccaactcacttttaaccaaaatcaattctca 24897598  T
Q  177 caaaatcaattttatcaaaatcaattct 204  Q
     ||| |||||||||||||||||||||||    
T  24897597 taaactcaattttatcaaaatcaattct 24897570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 6399238 - 6399092
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  ||  |||||||||||| | || | |||||||||||||||   | | |||||| ||||||||||||||||||||  |||||||     
T  6399238 aaaatcaattttgattaaaattatccaaacaacatcaactcataagaatcacttttaagtgagtgtatcgaaacataaatcaattcacatcaaactcact 6399139  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||| || | ||||||||||| |||| |||||| || || ||||||||    
T  6399138 tttaaccataatcaattctatcaaactcaattctaccagaatcaatt 6399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 42600282 - 42600336
Alignment:
Q  4 aatttggtaagtaatgagttaaaaaattaatataatatatctaactaagattaaa 58  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  42600282 aatttggtaattaatgagtaaaaaaattaatataatatatctaactaaaattaaa 42600336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 25497734 - 25497818
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||| |||||||| ||||||||||| |||||||| ||| || ||||||||||||   ||| |||||||||||||||||||||||    
T  25497734 tgtatccaaacataa-tcaattcacatccaactcacttttaaccaaaatcaattctcctaaactcaattttatcaaaatcaattct 25497818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 231
Target Start/End: Complemental strand, 24297722 - 24297547
Alignment:
Q  55 taaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcac 154  Q
    |||||| |||||||||  || ||||||||||||| || |||  |||||||||||||  | |||||| ||| ||| |||||| ||||  || |||||||||    
T  24297722 taaaatcaattttgattcaaactatccaaacaacatgcattactaagaatcactttcatattaatgcatccaaatataaattaattt-cactcaactcac 24297624  T
Q  155 cttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
     ||| | |  |||||||||   ||||||||||| ||||||||| |||| |   |||||||||| |||||||||||||    
T  24297623 ttttgattcgaatcaattcattcaaaatcaattctatcaaaattaatttttatcaccgcagaaccaaacacacacta 24297547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 40742425 - 40742276
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| ||||||||| |||  |||||||||| | | || | |||||||||||||   |  || |||||| ||||||||||||||||| ||  ||||||    
T  40742425 ttaaaatcaattttgatttaaaatatccaaacatcatcaactcataagaatcacttacat--tagtgtatccaaacataaatcaattcagatcaaactca 40742328  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    | ||| || ||||||||||||   ||| |||||| |||||||||||||||||    
T  40742327 cttttaacgaaaatcaattcttttaaactcaattctatcaaaatcaattctc 40742276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 36121611 - 36121502
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||| || ||||||||||||||||| ||| || |||||||||||    ||| |||||| |||||||||||||||||  |||||| | |     
T  36121611 tgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgacaccgctgtac 36121513  T
Q  219 caaacacacac 229  Q
    |||||||||||    
T  36121512 caaacacacac 36121502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 1836205 - 1836125
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||| |||||||||| | |||||||||||| ||| ||  | |||||||||||||| |||||||||||| |||||||||||||    
T  1836205 tatccaaacataaataacttcacattcaacccactttagattaaaatcaattcta-caaaatcaatttaatcaaaatcaatt 1836125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 202
Target Start/End: Complemental strand, 22552849 - 22552724
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    |||||||||||| |||||| |||| ||||||||||    ||||| ||| |||||||||||||||  |  ||||||||| |||  | ||||||||||| |     
T  22552849 tatccaaacaacatgaattgataataatcacttttacaataatgcatccaaacataaatcaattttccatcaactcacttttatccaaaatcaattcaat 22552750  T
Q  177 caaaatcaattttatcaaaatcaatt 202  Q
     |||||||||| | ||||||||||||    
T  22552749 taaaatcaattatgtcaaaatcaatt 22552724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 43550933 - 43550986
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||    
T  43550933 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 43550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 26243168 - 26243252
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    |||| ||||||||||||||||| ||  ||||||| ||| || ||||||||||||   ||| |||||| |||||||||||||||||    
T  26243168 tatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattctc 26243252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 40742166 - 40742234
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    |||||| |||||||||||||||||||| |||||||| ||| || ||||||||||||  |||| ||||||    
T  40742166 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaatt 40742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 233
Target Start/End: Original strand, 14382178 - 14382339
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||||| | || ||||||||| ||| |||||| ||||||||||||||     ||||||||| ||||||||||||||| |  ||||| |||| ||| ||    
T  14382178 aattttgacccaaactatccaaataacatgaattgataagaatcactttaaggataatgtatccaaacataaatcaatt-atgttcaaatcacttttaac 14382276  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||||||         ||||||||||| |||||||||||||||   |||||| |||| |||||| ||||||||    
T  14382277 taaaat---------caaaatcaattatatcaaaatcaattccgaccaccgtagaaccaaacatacactaaa 14382339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 31246673 - 31246618
Alignment:
Q  4 aatttggtaagtaatgagttaaaaaa-ttaatataatatatctaactaagattaaa 58  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||| ||||||    
T  31246673 aatttggtaattaatgagtaaaaaaaattaatataatatatctaactaaaattaaa 31246618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 35550270 - 35550372
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    ||||| |||||| || ||| | ||||||| ||| |  |||||||||| || |||||||||||  ||||||||||||| || |||||||| ||||||||||    
T  35550270 aaacaaaaatcactttacactaaactcacttttgataaaaatcaatttta-caaaatcaattcaatcaaaatcaattttcgccaccgcaaaatcaaacac 35550368  T
Q  226 acac 229  Q
    ||||    
T  35550369 acac 35550372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 29970845 - 29970926
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||||| |||||||||||| || | | ||||||||| ||| ||||||||||||| | ||||| |||||| ||||||||||||||    
T  29970845 gtatccaaacataaatcactttaaactcaactcacttttaactaaaatcaattat-acaaattcaattctatcaaaatcaatt 29970926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 38152304 - 38152156
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| |||  ||||||||| || | || | |||||||||| ||||   | ||| | || ||||||||||||||| ||||  |||||||     
T  38152304 aaaatcaattttgatttaaagtatccaaaccacatcaactcataagaatcatttttaagtaaatatttccaaacataaatcaatttacatcaaactcac- 38152206  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||| ||||||||||||| |  |||| | |||| |||||||||||||||||    
T  38152205 tttaactaaaatcaattttctcaaacttaattctatcaaaatcaattctc 38152156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 4941846 - 4941754
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||| |||||||||||||||||| |  ||||||| ||| |  ||||||||||||  |||| |||||| ||||| ||||||||||  |||||||    
T  4941846 tatccaaacataaatcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattatatcagaatcaattctagccaccgc 4941754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 32597943 - 32597863
Alignment:
Q  147 caactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacac 227  Q
    |||||||| ||| ||  |||||||||||| ||||||||||||| ||||| |||||| |  |||||||| || |||||||||    
T  32597943 caactcacttttgaccgaaatcaattctatcaaaatcaattttctcaaactcaatttttgccaccgcataaccaaacacac 32597863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 39219765 - 39219833
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||| |||||||||||| |||| ||| ||||||| ||| || ||||||||||||| |||||| ||||||    
T  39219765 tatccaaacataaatcacttcatattaaactcacttttaacgaaaatcaattctatcaaaattaatttt 39219833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 40792259 - 40792188
Alignment:
Q  130 ataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||||||||  |||||||||||| ||| |  |||||||||| || ||||||||||||||| ||||||||||    
T  40792259 ataaatcaattg-cattcaactcacttttaatcaaaatcaattatatcaaaatcaattttattaaaatcaatt 40792188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 42600508 - 42600564
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttg 112  Q
    ||||| |||||||||| ||| ||| |||||||| ||||||||||||||||| |||||    
T  42600508 aaaatcaattttgatccaagttattcaaacaacatgaatttataagaatcatttttg 42600564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 204
Target Start/End: Original strand, 44926820 - 44926967
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||| ||| | || | |||||||||||||||     | |||||| |||||||| ||||||||| |  |||||||     
T  44926820 aaaattaattttgattcaaactatccaaataacatcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcact 44926918  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    ||| || ||||||||||||  |||| |||||| ||||||| ||||||||    
T  44926919 tttaaccaaaatcaattctctcaaactcaattctatcaaactcaattct 44926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 2071592 - 2071537
Alignment:
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||||||||||| | |||||||||||||||  | |||||||| ||||||||||||||    
T  2071592 caaaatcaattctgtcaaaatcaattctcatcgccgcagaaccaaacacacactaa 2071537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 3465463 - 3465396
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    |||||||||||   |||| |||||| ||||||||||||||||   |||||||||| ||||||||||||    
T  3465463 aaaatcaattcactcaaactcaattctatcaaaatcaattctactcaccgcagaaccaaacacacact 3465396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 10552970 - 10552923
Alignment:
Q  125 taaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    |||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  10552970 taaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 19649210 - 19649281
Alignment:
Q  102 aatcacttttgtctt-aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    |||||||||||| || || ||||| |||||||||||| || ||||||||||||| ||| || ||||||||||    
T  19649210 aatcacttttgttttgaaggtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 44926945 - 44927008
Alignment:
Q  167 tcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||||||||| |||| |||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  44926945 tcaattctatcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 44927008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 26575904 - 26575945
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    ||||||||||||| || |||||||| ||||||||||||||||    
T  26575904 aaaatcaattctatcagaatcaattctatcaaaatcaattct 26575945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 42600974 - 42601031
Alignment:
Q  130 ataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    ||||||||||||||||||||||||| ||  || ||||||||||||   ||||||||||    
T  42600974 ataaatcaattcacattcaactcactttgaacaaaaatcaattctgttaaaatcaatt 42601031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 8124948 - 8125095
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||| | || |  ||||||||||||||   | | |||||| |||||||| |||||||||||  ||||||    
T  8124948 ttaaaatcaattttgattcaaactatccaaacaacttcaactcctaagaatcacttttaaatgagtgtatccaaacataa-tcaattcacatcaaactca 8125046  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    | | | || ||||||||||||  |||| || |||  | |||||||||||    
T  8125047 cttctaaccaaaatcaattctctcaaactcgattcaaccaaaatcaatt 8125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 204
Target Start/End: Original strand, 10368053 - 10368139
Alignment:
Q  117 aatgtatctaaacataaatcaattcacattcaactcaccttttact-aaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||||||||||| |||||| || || ||||||||| |||||||| |||||||||| | |||||| |||||   ||||||||||||||    
T  10368053 aatgtatctaaacacaaatcactttaccttcaactca-cttttactcaaaatcaatt-ttacaaaaacaattcactcaaaatcaattct 10368139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 11071139 - 11071179
Alignment:
Q  164 aaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||||||||| ||||||||||| ||||| ||||||||||    
T  11071139 aaatcaattctatcaaaatcaattatatcagaatcaattct 11071179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 24776480 - 24776519
Alignment:
Q  165 aatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  24776480 aatcaattcta-caaaatcaatttaatcaaaatcaattctc 24776519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 37667122 - 37667055
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||| ||| ||||||||||||||||| |||| |  ||| || ||||||||||||| |||||||||||||    
T  37667122 tatccaaatataaatcaattcacattaaacttat-tttaacgaaaatcaattctatcaaaatcaatttt 37667055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 39219807 - 39219859
Alignment:
Q  178 aaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    |||||||||| ||||||||| |||| | ||||||||| || ||||||||||||    
T  39219807 aaaatcaattctatcaaaattaattttttccaccgcacaaccaaacacacact 39219859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 232
Target Start/End: Complemental strand, 42752308 - 42752132
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||| | |||||  |||| ||||| |||||||||||||||||||||||||||||     
T  42752308 aaaatcaattttgatctaagttatccaaacaacatgaatttataagaattatttttgctttaaggtatccaaacataaatcaattcacattcaactcact 42752209  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||| || ||||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||||||||    
T  42752208 tttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaacacacactaa 42752132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 232
Target Start/End: Complemental strand, 39634282 - 39634106
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||| ||| ||||||||||||  ||||||||||||||||||||||| ||||  |||| ||||||||||||||||| |||||||||||     
T  39634282 aaaatcaattttgatccaagttatccaaacaacaagaatttataagaatcacttttgttttaagttatccaaacataaatcaattcatattcaactcact 39634183  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||| || ||||||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||||||||    
T  39634182 tttaaccaaaatcaattctaacaaaatcaattctgtccaaatcaattctctccaccgcagaaccaaacacacactaa 39634106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 232
Target Start/End: Complemental strand, 3622579 - 3622401
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| ||||||||| ||  ||||||||||||| | || |  ||||||||||||||   | | |||||| |||||||||||||||||||| |||||||    
T  3622579 ttaaaatcaattttgatttatactatccaaacaacatcaactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactca 3622480  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    | ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | ||||||||||||||    
T  3622479 cttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataacaaacacacactaa 3622401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 48459722 - 48459851
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| |  ||| |||||||||||||||   | | |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||     
T  48459722 ctatccaaacaacatccattcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 48459821  T
Q  176 acaaaatcaattttatcaaaatcaattctc 205  Q
     |||| |||||| |||||||||||||||||    
T  48459822 tcaaactcaattctatcaaaatcaattctc 48459851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 232
Target Start/End: Original strand, 37562582 - 37562738
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || | ||| |||||||||||   | | |||||| |||||||||||||||||||| |||||||| ||| || ||||||||||||     
T  37562582 ctatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctc 37562681  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
      ||| |||||| ||||||||||||||||| |||||||  || ||||||||||||||    
T  37562682 ttaaactcaattctatcaaaatcaattctccccaccgccaaaccaaacacacactaa 37562738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 207
Target Start/End: Original strand, 3750675 - 3750829
Alignment:
Q  53 attaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactc 152  Q
    |||||||| ||||||||| ||| ||||||||||||| | |||| |||||| ||| || | |   | |||||| |||||||||||||||||||| ||||||    
T  3750675 attaaaattaattttgatttaaactatccaaacaacatcaattcataagattcaattatattaaagtgtatccaaacataaatcaattcacatccaactc 3750774  T
Q  153 accttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctc 207  Q
    || ||| || ||||||||||||  |||| |||||||||| |||||| ||||||||    
T  3750775 acttttaaccaaaatcaattctctcaaactcaattttattaaaatctattctctc 3750829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 3342782 - 3342955
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || |||| |||||||| | || | ||||||||||||| | |   | |||||| ||||||||||||||||| || ||||||||     
T  3342782 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcatatccaactcact 3342881  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    ||| |||||||||||||||  |||| |||||| ||||||||| ||||||| |||||||  || |||||||||||    
T  3342882 tttaactaaaatcaattctctcaaactcaattctatcaaaattaattctccccaccgccaaaccaaacacacac 3342955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 10372005 - 10371919
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||||  |||| |||||| ||||||||||||||||| ||||||    
T  10372005 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccg 10371919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 38230121 - 38230211
Alignment:
Q  117 aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctc 207  Q
    |||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||   ||| |||||| |||||||||||||||||||    
T  38230121 aatgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaattctatcaaaatcaattctctc 38230211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 39391254 - 39391097
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || |||| |||||||| | |||| ||||||||||||| |     | |||||| |||||||||||||||||| |  |||||||     
T  39391254 aaaatcaattttgattcaaactattcaaacaacatcaattcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcact 39391155  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||| || |||||||||||||| |||||||||| |||||||||||||| || |||||||    
T  39391154 tttaaccaaaatcaattctaaaaaaatcaattctatcaaaatcaattttcgccaccgc 39391097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 44967516 - 44967367
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  ||  |||||||||||| | || | ||||||||||||| | |   | |||||  |||||||||||||||||||||||||||||     
T  44967516 aaaatcaattttgattcaaattatccaaacaacatcaactcataagaatcacttctattaaagtgtattcaaacataaatcaattcacattcaactcact 44967417  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||| || ||||||||||||  |||| |||||| |||||||||||||||||    
T  44967416 tttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattctc 44967367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 37639492 - 37639597
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    |||||||||||||||||||||||| |||| ||| || ||||||||||||  |||| |||||| ||||||||||||||||| || ||||   | |||||||    
T  37639492 aaacataaatcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccataccaaacac 37639591  T
Q  226 acacta 231  Q
    ||||||    
T  37639592 acacta 37639597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 229
Target Start/End: Complemental strand, 40903284 - 40903112
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| | | ||||||||||||| |||||| |||| ||||||||||   ||||| |||| ||||||||| ||||| |  ||||||||||     
T  40903284 aaaatcaattttgatttgaactatccaaacaacatgaattgataaaaatcacttttactttaatatatccaaacataaaccaatt-aagttcaactcact 40903186  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    |||    ||||||||||||| ||||||||||| | |||||||||||| || |||| | | || |||||||||||    
T  40903185 tttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaattttcgccactggaaaaccaaacacacac 40903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 386597 - 386452
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | |||  |||||||||||||||   ||| | |||| ||||||||||||||||||||||| || ||     
T  386597 aaaatcaattttgattcaatctatccaaacaacatcaatc-ataagaatcacttttcggttagtatatccaaacataaatcaattcacattcagctaact 386499  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||| || ||||||||| ||  |||| |||||| ||||||||||||||    
T  386498 tttaaccaaaatcaatactctcaaactcaattatatcaaaatcaatt 386452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 2839304 - 2839452
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    |||||||||||  | |||| | |||||||||||||| ||||||| ||| ||||||||||||||| |  |||||||||| ||| |  |||||| ||||||     
T  2839304 tatccaaacaatttaaattaacaagaatcacttttgacttaatgaatccaaacataaatcaattta-gttcaactcacttttcataaaaatctattctat 2839402  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacaca 226  Q
    |||||||||||  |||| |||||||| ||  ||||||| || ||||||||    
T  2839403 caaaatcaattcaatcataatcaattttcgtcaccgcataaccaaacaca 2839452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 41715649 - 41715822
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||| ||| || ||||||||||||| | |||| ||| |||| ||||||   | | || ||| ||||||||||||||| ||||  |||||||     
T  41715649 aaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcact 41715748  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    ||| |  ||||||||||||   |||||||||| ||||||||||||||||| |||||||   | |||||||||||    
T  41715749 tttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacacacac 41715822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 47021974 - 47022066
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccacc 211  Q
    |||||| |||||||||||||||||| ||||||| || ||| || ||||||||||||  |||| |||||| |||||||||||||| || |||||    
T  47021974 tgtatccaaacataaatcaattcactttcaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccacc 47022066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 34366035 - 34365924
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| |||||||||||||||||||  ||||| || ||| |||||||||||||||  |||| || ||| ||||||||||||||||  |||||||   | |    
T  34366035 gtatccaaacataaatcaattcacacccaactaacttttaactaaaatcaattctttcaaactccattatatcaaaatcaattctagccaccgccatacc 34365936  T
Q  220 aaacacacacta 231  Q
    ||||||||||||    
T  34365935 aaacacacacta 34365924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 230
Target Start/End: Original strand, 34010332 - 34010504
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | ||||||| |||||||   | | |||||  |||||||| ||| |||| || ||||||||     
T  34010332 aaaattaattttgattcaaactatccaaacaacatcaactcataagaaccacttttaaatgagtgtattcaaacataa-tcagttcatatccaactcact 34010430  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||  || ||||||||||||    
T  34010431 tttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgccaccgc-caaccaaacacacact 34010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 209
Target Start/End: Original strand, 3375482 - 3375635
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||| ||   ||||||||||| |  | | |||||||||||||||   | | |||||| ||||| |||||||||||||   |||||||     
T  3375482 aaaatcaattttgatccaaatcatccaaacaacatcgactcataagaatcacttttaagtgagtgtatccaaacacaaatcaattcacaccaaactcact 3375581  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctcca 209  Q
    ||| || ||||| ||||||  |||| |||||| |||||||||||||||||||||    
T  3375582 tttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctctcca 3375635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 20088931 - 20089032
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    |||||||||||| || || |||||||||| ||| || |||||||||| ||   ||||||||| |||||||||||||||| ||||||||| || | |||||    
T  20088931 aaacataaatcactttacgttcaactcacttttaaccaaaatcaattatacttaaatcaattctatcaaaatcaattctttccaccgcacaaccgaacac 20089030  T
Q  226 ac 227  Q
    ||    
T  20089031 ac 20089032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 47217588 - 47217487
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    ||||||||||||||||||||  ||||||| ||| |  ||||||||||||  |||| |||||| |||||||||||||| || || |||| ||| |||||||    
T  47217588 aaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccgccgccgaaccaaacac 47217489  T
Q  226 ac 227  Q
    ||    
T  47217488 ac 47217487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 212
Target Start/End: Original strand, 32186932 - 32187088
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||| ||| || ||||||||||||| | |||| ||| |||| ||||||   | | || ||| ||||||||||||||| ||||  |||||||     
T  32186932 aaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcact 32187031  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    ||| |  ||||||||||||   ||||| |||| ||||||||||||||||| ||||||    
T  32187032 tttaatcaaaatcaattctcttaaaattaattctatcaaaatcaattctcgccaccg 32187088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 46541662 - 46541738
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||||||||| ||||||||||||||||||| | | || ||||||||||||  |||| |||||| ||||||||||||||    
T  46541662 aaacataaaccaattcacattcaactcacttctaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 46541738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 12632130 - 12632043
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||||||||||||||||||||  ||||||| ||| || |||||| |||||  ||||   |||| |||||||||||||||||||||||||    
T  12632130 aaacataaatcaattcacatctaactcacttttaaccaaaatctattctctcaaacaaaattctatcaaaatcaattctctccaccgc 12632043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 38494278 - 38494341
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    ||||||||| || |||||||||||||||| ||| || ||||||||||| |||||||||||||||    
T  38494278 aaacataaaccacttcacattcaactcacttttaaccaaaatcaattcaaacaaaatcaatttt 38494341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 39977609 - 39977719
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||| ||| ||||||||||||| ||  ||||||| ||| |||||||||||||||  |||| | |||| |||||||||||||| || |||||||   | ||    
T  39977609 tatccaaaaataaatcaattcatatcaaactcacttttgactaaaatcaattctttcaaactaaattctatcaaaatcaattatcgccaccgccatacca 39977708  T
Q  221 aacacacacta 231  Q
    |||||||||||    
T  39977709 aacacacacta 39977719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 42752537 - 42752483
Alignment:
Q  4 aatttggtaagtaatgagttaaaaaattaatataatatatctaactaagattaaa 58  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||| ||||||    
T  42752537 aatttggcaattaatgagtaaaaaaattaatataatatatctaactaaaattaaa 42752483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 205
Target Start/End: Complemental strand, 24771007 - 24770879
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    |||||||||||| | |||| |||| ||||||||||   ||  | |||||||| ||||||||||| |||| |||||||| ||| || |||||||||| |      
T  24771007 tatccaaacaacataaattgataaaaatcacttttagttttgtatatctaaatataaatcaatttacatccaactcacttttaaccaaaatcaattatct 24770908  T
Q  177 caaaatcaattttatcaaaatcaattctc 205  Q
    |||| | |||| ||||||||| |||||||    
T  24770907 caaacttaattctatcaaaattaattctc 24770879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 42740449 - 42740521
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatca 193  Q
    |||||||||||||||||||| |||||||||| || ||| || ||||||||||||  |||| |||||| |||||    
T  42740449 tatctaaacataaatcaattaacattcaacttacttttaaccaaaatcaattctctcaaactcaattatatca 42740521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 16353527 - 16353589
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacaca 226  Q
    ||||||||||||  ||||||||||| ||||| |||||||| |||||||||||||| ||||||||    
T  16353527 aaaatcaattctg-caaaatcaattctatcagaatcaattatctccaccgcagaaccaaacaca 16353589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 36920225 - 36920146
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||||||||||||||| | ||  ||||||| ||| || ||||||||||||  |||| |||||||||||||||| |||||||    
T  36920225 aaacataaatcaatttatatctaactcacttttaaccaaaatcaattctttcaaactcaattttatcaaaattaattctc 36920146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 43186605 - 43186537
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    |||||||||||||  | |||||||| |||||||||||||| | ||||||||| || ||||||||||||||    
T  43186605 aaaatcaattctat-agaatcaattatatcaaaatcaattttatccaccgcacaaccaaacacacactaa 43186537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 12964660 - 12964736
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||||||||||||||  ||||||||||||| | | || |||||||||| |  |||| |||||| ||||||||||||||    
T  12964660 aaacataaatcaatctacattcaactcacttataacgaaaatcaattatctcaaactcaattctatcaaaatcaatt 12964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 33746401 - 33746497
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    ||||||||||||  ||||||||||||||||||  ||   |||||||| | ||||| ||||||||| | ||||||||||| ||| |  ||||||||||    
T  33746401 ctatccaaacaaaatgaatttataagaatcacggttaagttaatgtaaccaaacaaaaatcaatttatattcaactcacttttaatcaaaatcaatt 33746497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 43631736 - 43631656
Alignment:
Q  133 aatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||||||||| ||  ||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||| || |||||||    
T  43631736 aatcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccaccgc 43631656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 1766453 - 1766548
Alignment:
Q  92 aatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    |||| ||||||||||||||| | |||| ||||| ||| ||||||||||| |  |||||||||| ||| |  ||||||||||  | |||||||||||    
T  1766453 aattgataagaatcacttttatgttaaggtatccaaatataaatcaatttaggttcaactcacttttaatcaaaatcaatttaatcaaaatcaatt 1766548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 37008397 - 37008312
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    |||||||||||||| ||| |  ||||||| ||| || ||||||||||| ||||||||||||| ||| ||||||| || || ||||||    
T  37008397 aaacataaatcaat-cacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattctataaaaatcagttttcgccaccg 37008312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 25472191 - 25472150
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    ||||||||||||  ||||||||||| ||||||||||||||||    
T  25472191 aaaatcaattctgtcaaaatcaattctatcaaaatcaattct 25472150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 32205958 - 32206035
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattct 174  Q
    |||||||||||||||   | | |||||| ||||||||||||||||||||  ||| ||| ||| | |||||||||||||    
T  32205958 ataagaatcacttttaagtaagtgtatccaaacataaatcaattcacatcaaacccacttttaattaaaatcaattct 32206035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 40561755 - 40561699
Alignment:
Q  117 aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattc 173  Q
    |||||||| |||||||||||| || || |||||||||  |||||||| |||||||||    
T  40561755 aatgtatccaaacataaatcactttactttcaactcaatttttactagaatcaattc 40561699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 48176771 - 48176839
Alignment:
Q  142 acattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccac 210  Q
    ||||||||||||| ||| | |||||| ||||| | | |||| ||||| |||||||| ||||||||||||    
T  48176771 acattcaactcacttttgattaaaattaattcaagctaaattaatttcatcaaaattaattctctccac 48176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 7e-55; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 54488559 - 54488735
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||| ||| |||||||||||  |||||||||||||||||||||||  |||| ||||  ||||||||||||||||||||||||||||    
T  54488559 ttaaaatcaattttgatccaagttatccaaacaaaatgaatttataagaatcacttttgctttaaggtattcaaacataaatcaattcacattcaactca 54488658  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | ||| || ||||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||||||    
T  54488659 cttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaacacacact 54488735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 56 - 230
Target Start/End: Original strand, 38305967 - 38306141
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||| ||| |||||||||||| |||||||||||||||||||||||  |||| ||||| |||||||||||||||| ||||||||||||     
T  38305967 aaaatcaattttgatccaagttatccaaacaacatgaatttataagaatcacttttgctttaaggtatccaaacataaatcaattcgcattcaactcact 38306066  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||| || ||||||||||||||||||||||||| | |||||||||||| ||||||||| |||| ||||||||||||    
T  38306067 tttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgtagaaccaaacacacact 38306141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 232
Target Start/End: Complemental strand, 14564276 - 14564100
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||  || || ||||| ||||||||||||||||| || ||||||||     
T  14564276 aaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcaca 14564177  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||| || ||||||||||||  |||| |||||| |||||||||||||||||||| ||||  || ||||||||||||||    
T  14564176 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccgccgcccaaccaaacacacactaa 14564100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 39187753 - 39187869
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||||||||||||||||||| | || ||| || ||||||||||||  |||| |||||| |||||||||||||||||||||||||  ||     
T  39187753 tgtatccaaacataaatcaattcacattcaaattacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgccaaac 39187852  T
Q  219 caaacacacactaaacc 235  Q
    |||||||||||||||||    
T  39187853 caaacacacactaaacc 39187869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 29149439 - 29149280
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||  | || | |||| ||||||||||   | | |||||| ||||||||||||||||||||||||||||    
T  29149439 ttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 29149340  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    | |||||  ||||||||||||  |||| |||||| ||||||||||||||||| |||||||    
T  29149339 ctttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgc 29149280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 42945030 - 42944871
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  |  ||||||||||||| | ||   |||||||||||||||   | | | |||||||||||||||||||||||||||||||||    
T  42945030 ttaaaatcaattttgatacatactatccaaacaacatcaacacataagaatcacttttaagtaagtatatctaaacataaatcaattcacattcaactca 42944931  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    | ||| || ||||||||||||  ||||||||||| ||||||||| ||||||  |||||||    
T  42944930 cttttaaccaaaatcaattctctcaaaatcaattctatcaaaataaattcttgccaccgc 42944871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 19592341 - 19592187
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||||| ||||  ||||||||||||||     | |||||| |||||||||||||||||| | |||||||| ||| || ||||||||||||     
T  19592341 ctatccaaacaacgtcaattcgtaagaatcacttttagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctc 19592242  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
      ||| |||||| ||||||||||||||||| |||||||   ||||||||||||||    
T  19592241 taaaactcaattctatcaaaatcaattctccccaccgccatatcaaacacacact 19592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 41866170 - 41866290
Alignment:
Q  116 taatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcag 215  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||| |||||| |||||||   |||| ||||||||||||||||||||| || |||||||      
T  41866170 taatgcatccaaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaattttatcaaaatcaattatcgccaccgcca 41866269  T
Q  216 aatcaaacacacactaaacct 236  Q
    || ||||||||||||| ||||    
T  41866270 aaccaaacacacactacacct 41866290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 6138687 - 6138577
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||||||||||||||| |||||||| ||| || |||||||||| |  |||| |||||| ||||||||||||||||| |||||||  ||     
T  6138687 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattatttcaaactcaattctatcaaaatcaattctccccaccgccaaac 6138588  T
Q  219 caaacacacac 229  Q
    |||||||||||    
T  6138587 caaacacacac 6138577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 16566324 - 16566410
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||||||    
T  16566324 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctc 16566410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 26651915 - 26651805
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||||||||  |||| | |||| ||||||||||||||||| || ||||   |     
T  26651915 tgtatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattctcgccgccgccatac 26651816  T
Q  219 caaacacacac 229  Q
    |||||||||||    
T  26651815 caaacacacac 26651805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 212
Target Start/End: Original strand, 39636739 - 39636897
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  |  ||||||||||||| | || |  ||||||||||||||   | | |||||| |||||||||||||||||||| |||||||    
T  39636739 ttaaaatcaattttgattcatactatccaaacaacatcaactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactca 39636838  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    | ||| |  ||||||||||||  |||| |||||| ||||||||||||||||| ||||||    
T  39636839 cttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccg 39636897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 55638822 - 55638736
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    |||||||||||||||||||||| ||||| ||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||||||    
T  55638822 tgtatctaaacataaatcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattctc 55638736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 187
Target Start/End: Complemental strand, 48550559 - 48550426
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||| | || | ||||||||||||| | |   | | |||| |||||||||||||||||||| |||||||    
T  48550559 ttaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtttatccaaacataaatcaattcacatccaactca 48550460  T
Q  154 ccttttactaaaatcaattctaacaaaatcaatt 187  Q
    | ||| || ||||||||||||| |||||||||||    
T  48550459 cttttaaccaaaatcaattctatcaaaatcaatt 48550426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 51922896 - 51923045
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||| ||||||     | |||||| ||||||||||||||||| |||||||||||     
T  51922896 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaattacttttagtaaagtgtatccaaacataaatcaattcagattcaactcact 51922995  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||| || ||||||||||||  |||| |||||| || ||||||||||||||    
T  51922996 tttaaccaaaatcaattctctcaaactcaattctaacaaaatcaattctc 51923045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 13167487 - 13167627
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||||||  || ||||||||||| | | |||  |||||||||||||||   |   |||||| ||| ||||||||||||||||||||||||| ||| ||    
T  13167487 aattttgattcaatctatccaaacatcattaatacataagaatcacttttaaatgggtgtatccaaatataaatcaattcacattcaactcacttttaac 13167586  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
     ||||||||||||  |||| |||||| ||||||||||||||    
T  13167587 caaaatcaattctctcaaactcaattatatcaaaatcaatt 13167627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 230
Target Start/End: Complemental strand, 46830201 - 46830025
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| ||||||||| ||   |||||||||||| | || | |||||||||| ||||     | |||||| |||||||||||||||||||| |||||||    
T  46830201 ttaaaatcaattttgatgtagaatatccaaacaacatcaactcataagaatcaattttaagaaagtgtatccaaacataaatcaattcacatccaactca 46830102  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | ||| || |||||||||||    ||| |||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  46830101 cttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 46830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 233
Target Start/End: Original strand, 54150488 - 54150659
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    ||||||||| |||  ||||||||||||   || |||||||||||| ||||  |  | |||||| ||||| ||||||||||||||  ||||||| ||| |     
T  54150488 aattttgatttaatgtatccaaacaacaccaacttataagaatcatttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaat 54150587  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
     ||||||||||||  |||| |||||| ||||||||||||||||  |||||||   | |||||||||||||||    
T  54150588 caaaatcaattctctcaaactcaattctatcaaaatcaattcttgccaccgccataccaaacacacactaaa 54150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 202
Target Start/End: Original strand, 6505157 - 6505303
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||  ||| ||||||||||||| | || | || | |||||||||| | | | |||||||||||||||||||||||||||  ||||||      
T  6505157 aaaatcaattttgacttaaactatccaaacaacatcaagtcatgataatcacttttatatgagtgtatctaaacataaatcaattcacatcaaactcatt 6505256  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||| || ||||||||||||  |||| |||||| ||||||| ||||||    
T  6505257 tttaaccaaaatcaattctctcaaactcaattctatcaaagtcaatt 6505303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 53532019 - 53532109
Alignment:
Q  142 acattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    |||| |||||||| ||| ||||||||||||| |  |||| |||||||||||||||||||||||| ||||||| ||| |||||||| |||||    
T  53532019 acatccaactcacttttaactaaaatcaattatgtcaaactcaattttatcaaaatcaattctcaccaccgccgaaccaaacacatactaa 53532109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 9893667 - 9893824
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||| || ||| ||||||||||||| | || | ||||||||||||||    |   |||||| ||||||| ||||||||| ||  |||||||     
T  9893667 aaaatcaattttaatttaaactatccaaacaacatcaactcataagaatcactttcaagtgggtgtatccaaacatatatcaattcatatctaactcact 9893766  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||    
T  9893767 tttgacaaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgc 9893824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 15603381 - 15603490
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||||||||| ||||||||||||||  ||||||| |||||| | |||||||| |  |||| |||||| ||||||||||||||||| ||||||   || ||    
T  15603381 tatctaaacacaaatcaattcacatcaaactcactttttaccataatcaattatctcaaactcaattctatcaaaatcaattctccccaccgtcaaacca 15603480  T
Q  221 aacacacact 230  Q
    ||||||||||    
T  15603481 aacacacact 15603490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 43772190 - 43772077
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||| |||||||| |||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||| ||  |||| |  ||     
T  43772190 tgtatccaaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatcgtcaccaccaaac 43772091  T
Q  219 caaacacacactaa 232  Q
    ||||||||||||||    
T  43772090 caaacacacactaa 43772077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 43781648 - 43781492
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||     | |||||| |||||||| ||||||||| |  |||||||     
T  43781648 aaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcact 43781550  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||    
T  43781549 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgc 43781492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 49519749 - 49519841
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccacc 211  Q
    |||||| |||||||||| ||||||||| |||||||| ||| || ||||||||||||  |||| |||||| |||||||| |||||||| |||||    
T  49519749 tgtatccaaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaaccaattctcaccacc 49519841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 4954183 - 4954048
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||| | || | |||||||||||||||   | |  ||| | ||||||||||||||||||||  ||||||    
T  4954183 ttaaaattaattttgattcaacctatccaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaactca 4954084  T
Q  154 ccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    | ||| || ||||||||||||  |||||||||||||    
T  4954083 cttttaaccaaaatcaattctctcaaaatcaatttt 4954048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 230
Target Start/End: Original strand, 48550173 - 48550347
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||| ||| || ||||||||||||  | |||| ||| |||| ||||||   | | || ||| ||||||||||||||| ||||  |||||||     
T  48550173 aaaatcaattttaatccaatctatccaaacaatatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcact 48550272  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||| |  ||||||||||||   |||||||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  48550273 tttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 48550347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 14072459 - 14072631
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | || |||||||||| | |   | |||||| |||||||| |||||| || ||||||||||     
T  14072459 aaaatcaattttgattcaaactatccaaacaacatcaactcattagaatcacttctattaaagtgtatccaaacataa-tcaatttaccttcaactcact 14072557  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    ||| |  ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | |||||||||||    
T  14072558 tttaaacaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacacacac 14072631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 22694656 - 22694556
Alignment:
Q  127 aacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacaca 226  Q
    ||||||||||| || |  |||||||||| ||| || |||||||||||||   ||||||||| || ||||||||||||| ||||||||| || ||||||||    
T  22694656 aacataaatcactttatgttcaactcacttttaaccaaaatcaattctacttaaatcaattctaccaaaatcaattctttccaccgcacaaccaaacaca 22694557  T
Q  227 c 227  Q
    |    
T  22694556 c 22694556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 22699743 - 22699831
Alignment:
Q  102 aatcacttttgtctt-aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||||||| || || ||||| |||||||||||| || |||||||||| || ||| || ||||||||||||| |||||||||||||    
T  22699743 aatcacttttgttttgaaggtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatttt 22699831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 22980787 - 22980699
Alignment:
Q  102 aatcacttttgtctt-aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||||||| || || ||||| |||||||||||| || |||||||||| || ||| || ||||||||||||| |||||||||||||    
T  22980787 aatcacttttgttttgaaggtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatttt 22980699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 22994374 - 22994286
Alignment:
Q  102 aatcacttttgtctt-aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||||||| || || ||||| |||||||||||| || |||||||||| || ||| || ||||||||||||| |||||||||||||    
T  22994374 aatcacttttgttttgaaggtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatttt 22994286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 229
Target Start/End: Original strand, 25312692 - 25312844
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    ||||||||||||   |||| ||||||||| |||||  |  | |||||| ||||| ||||||||||||||  ||||||| ||| |  ||||||||||||      
T  25312692 tatccaaacaacaacaattcataagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctct 25312791  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    |||| |||||| |||||||||||||||||   |||||  || |||||||||||    
T  25312792 caaactcaattctatcaaaatcaattctcgttaccgccaaaccaaacacacac 25312844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 15619630 - 15619701
Alignment:
Q  116 taatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    ||||||||| ||||||| |||||||||||| |||||||| |||||| ||||||||||||  |||| ||||||    
T  15619630 taatgtatccaaacatacatcaattcacatccaactcactttttaccaaaatcaattctctcaaactcaatt 15619701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 32238125 - 32238015
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||  ||||||||||||||||||| ||| || |||||||||||   |||| |||||| |||||||||||||| || |||||||   |     
T  32238125 tgtatccaaacataac-caattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattctatcaaaatcaattatcgccaccgctatac 32238027  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  32238026 caaacacacact 32238015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 33574204 - 33574283
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||||||||||||||||||||||||||||| ||| || ||||| ||||||  |||| |||||| ||||||||  |||||||    
T  33574204 aaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaaataattctc 33574283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 14054872 - 14054954
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattc 203  Q
    |||| ||||||||||||||||||||  ||||||| ||| |||||| ||||||||  |||| |||||| | |||||||||||||    
T  14054872 tatccaaacataaatcaattcacatcaaactcacttttgactaaactcaattctttcaaactcaattatgtcaaaatcaattc 14054954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 48556585 - 48556683
Alignment:
Q  133 aatcaattcacattcaactcacctttta-ctaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||||||||||||||||| |||| ||||  | |||||||||| || |||| |||||| |||||||||||||| | |||||||| ||| ||||| ||||||    
T  48556585 aatcaattcacattcaagtcactttttttcaaaaatcaattttatcaaactcaattctatcaaaatcaattatttccaccgctgaaccaaacgcacact 48556683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 230
Target Start/End: Original strand, 523130 - 523280
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    |||||||||||||  |||||| ||||||||| ||    || | || ||| ||||||||||||||||| ||| ||||||| |||| | |||||||||| |     
T  523130 ctatccaaacaacaagaatttttaagaatcaatt----ctaagtgaatccaaacataaatcaattcatattgaactcactttttcccaaaatcaattttg 523225  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
     |||  ||||||  ||||||||||||| |||| || || ||| ||||||||||||    
T  523226 tcaagctcaattaaatcaaaatcaattttctcaacagctgaaccaaacacacact 523280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 14075996 - 14076148
Alignment:
Q  81 caaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaa 180  Q
    |||||||| | |||| |||||||||||||||   |  |||| || ||||||||||||||| ||||  ||||||| ||| || |||||||||| |  ||||    
T  14075996 caaacaacatcaattcataagaatcacttttaagtatatgtttccaaacataaatcaatttacatcaaactcac-tttaaccaaaatcaattttctcaaa 14076094  T
Q  181 atcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaac 234  Q
     |||||| ||||||||||||||||| || ||||  ||  ||||||| |||||||    
T  14076095 ctcaattctatcaaaatcaattctcaccgccgccaaactaaacacatactaaac 14076148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 16492905 - 16493016
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    |||||||||| || | |||| |||| |||||||||||| ||| |||||| |||||||||| |||||||||||||||||| ||| |  ||| |||||| |     
T  16492905 ctatccaaacgacataaattgataa-aatcacttttgtgtta-tgtatccaaacataaataaattcacattcaactcacttttaatcaaactcaattatt 16493002  T
Q  176 acaaaatcaatttt 189  Q
     |||||||||||||    
T  16493003 tcaaaatcaatttt 16493016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 28947809 - 28947708
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    |||||||||||| || || |||||||||| ||| || ||||||||||| |   |||||||||  | ||||||||||||| ||||||||| || |||||||    
T  28947809 aaacataaatcactttacgttcaactcacttttaaccaaaatcaattccacttaaatcaattccaccaaaatcaattctttccaccgcacaaccaaacac 28947710  T
Q  226 ac 227  Q
    ||    
T  28947709 ac 28947708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 39993574 - 39993679
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||||||||||||||||||||||||| ||||||  ||| |  |||||||||||||  |||||||||| | | |  ||||||| ||||||||  | |||||    
T  39993574 tatctaaacataaatcaattcacatttaactcatttttaatcaaaatcaattctatgaaaatcaattctcttatgatcaattttctccaccttaaaatca 39993673  T
Q  221 aacaca 226  Q
    ||||||    
T  39993674 aacaca 39993679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 46926067 - 46926160
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    |||||| ||||||||||||||||||||  ||||||| ||| || |||| ||||| |  |||| |||||| |||||||||||||| || ||||||    
T  46926067 tgtatccaaacataaatcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaattctatcaaaatcaattatccccaccg 46926160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 54153077 - 54153157
Alignment:
Q  133 aatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||||||||||||||||||||| ||| || |||||||||||   |||| |||||| ||| |||||||||| || |||||||    
T  54153077 aatcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattatattaaaatcaattatcgccaccgc 54153157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 54487289 - 54487217
Alignment:
Q  117 aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||| ||||||||||||||| ||||||||||||| ||| |   |||||||||||| |||| ||||||||    
T  54487289 aatgtatccaaacataaatcaatttacattcaactcacttttgatcgaaatcaattctatcaaactcaatttt 54487217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 54683465 - 54683521
Alignment:
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||||||||||| |||||||||||||| | | |||||||||| |||||||||||||||    
T  54683465 caaaatcaattctatcaaaatcaatttttttcaccgcagaaccaaacacacactaaa 54683521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 1616523 - 1616589
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||||||||||||| ||||||||||| |||||||||||||||| | ||||||| || |||||| |||||    
T  1616523 aaaatcaattcta-caaaatcaattctatcaaaatcaattctattcaccgcacaaccaaacaaacact 1616589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 5025549 - 5025667
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| |||||||||||||||     ||||||||| | | |||||||||||||||| |||||||||||  ||||||||||||| |   ||||||| || |    
T  5025549 gtatccaaacataaatcaatttttgctcaactcacttctaactaaaatcaattcta-caaaatcaattcaatcaaaatcaattttagtcaccgcataacc 5025647  T
Q  220 aaacacacactaaacctctt 239  Q
    ||||||||||| || |||||    
T  5025648 aaacacacacttaatctctt 5025667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 26455051 - 26454960
Alignment:
Q  96 tataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    ||||| ||||| |||| | ||||||||||||||||||||| ||||| |||||||||| | ||| | |||||| |||| || ||||| |||||    
T  26455051 tataaaaatcatttttatgttaatgtatctaaacataaataaattcccattcaactcccttttaattaaaattaattttatcaaaaacaatt 26454960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 26824342 - 26824215
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    ||||||||||| | ||||||||||||  | |||| ||||||||||||| |   | || ||||||||| ||||||||||| ||| |||| | |  ||| ||    
T  26824342 aattttgatctcatctatccaaacaaaataaattaataagaatcacttctacataaaagtatctaaatataaatcaatttacactcaatttatttttaac 26824243  T
Q  162 taaaatcaattctaacaaaatcaatttt 189  Q
     ||||||||||||| |||||||| ||||    
T  26824242 caaaatcaattctatcaaaatcattttt 26824215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 28987051 - 28987150
Alignment:
Q  133 aatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||||||||||| |  ||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||| || |||||||   | ||||||||||||||    
T  28987051 aatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaaacacacactaa 28987150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 48257059 - 48257114
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcactttt 111  Q
    ||||| |||||||||| ||  |||||||||||| ||||||||||||||||||||||    
T  48257059 aaaatcaattttgatccaatttatccaaacaacatgaatttataagaatcactttt 48257114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 13183180 - 13183034
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| |||  |||||||| ||| | || |||||| ||||| ||||   | | |||||| |||||||||||||||||| || ||||  |     
T  13183180 aaaatcaattttgatttaaattatccaaaaaacatcaacttataaaaatcatttttaaataagtgtatccaaacataaatcaattcaccttaaacttgct 13183081  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||| || |||||||||| |  || | |||||||||||||||||||||    
T  13183080 tttaaccaaaatcaattatctcagactcaattttatcaaaatcaatt 13183034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 38305747 - 38305801
Alignment:
Q  4 aatttggtaagtaatgagttaaaaaattaatataatatatctaactaagattaaa 58  Q
    |||||||||| |||||||| ||||||||| | |||||||||||||||| ||||||    
T  38305747 aatttggtaattaatgagtaaaaaaattattgtaatatatctaactaaaattaaa 38305801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 48407764 - 48407679
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    |||||| |||||||| ||||||||| |  ||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||||||    
T  48407764 tgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctc 48407679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 202
Target Start/End: Original strand, 49136478 - 49136624
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  ||  ||| |||||||| | || | |||||||||||||||   | | |||||| ||||||||||||||||||||  |||||||     
T  49136478 aaaatcaattttgattaaaattattcaaacaacatcaactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcacatcaaactcact 49136577  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||| || | ||||||||||  |||| |||||| || || ||||||||    
T  49136578 tttaaccataatcaattctctcaaactcaattataccagaatcaatt 49136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 3652653 - 3652765
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| || |||  |||||||||||||  | |||||| ||| |||||||||| ||||  || ||||||||| ||| | |  |||||||||||    
T  3652653 ctatccaaacaacatgcattactaagaatcactttcatattaatgcatccaaacataaattaatt-tcactcaactcacttttgattcgaatcaattcta 3652751  T
Q  176 acaaaatcaatttt 189  Q
     |||||||||||||    
T  3652752 tcaaaatcaatttt 3652765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 36150666 - 36150719
Alignment:
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||||||||||| |||||||||||||||||  ||||||| || ||||||||||||    
T  36150666 caaaatcaattatatcaaaatcaattctcgtcaccgcacaaccaaacacacact 36150719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 56241924 - 56241847
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattct 174  Q
    |||||||||||||||   |||||||||| ||||||||||||||||| ||  ||||||| ||| |  ||||||||||||    
T  56241924 ataagaatcacttttacattaatgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattct 56241847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 16202572 - 16202532
Alignment:
Q  164 aaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  16202572 aaatcaattctctcaaaatcaattttatcaaaatcaattct 16202532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 4649952 - 4649885
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    |||||||||||   |||| |||||||||||||||||||||||   |||| ||||| ||||||||||||    
T  4649952 aaaatcaattcactcaaactcaattttatcaaaatcaattctactcaccacagaaccaaacacacact 4649885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 38740369 - 38740259
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||||||| ||||  |||||||||| |||  | |||||||||| | ||||||||||||   |||||||||||||  | |||||  |||     
T  38740369 tgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt-ttacaaaatcaattcattcaaaatcaattccatacaccgtggaac 38740271  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  38740270 caaacacacact 38740259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 46958049 - 46958112
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||||| | || || |||||||||| ||| || ||||||||||||| |||||||||||||    
T  46958049 aaacataaattactttacgttcaactcacttttaaccaaaatcaattctatcaaaatcaatttt 46958112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 48550451 - 48550396
Alignment:
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||||||||||| ||||||||||||||||  |||||||  || ||||||||||||||    
T  48550451 caaaatcaattctatcaaaatcaattcttcccaccgccaaaccaaacacacactaa 48550396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 9889358 - 9889308
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||||||||||||  |||| |||||| ||||||||||||||||| |||||||    
T  9889358 aaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgc 9889308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 21691146 - 21691100
Alignment:
Q  180 aatcaattttatcaaaatcaattctctccaccgcagaatcaaacaca 226  Q
    |||||||| ||||||||||||||||| |||||| |||| ||||||||    
T  21691146 aatcaattctatcaaaatcaattctccccaccggagaaccaaacaca 21691100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 22605767 - 22605701
Alignment:
Q  165 aatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
    ||||||||||| ||||||||||| | ||| |||||||||| ||||  || ||| |||||||||||||    
T  22605767 aatcaattctatcaaaatcaattctgtcagaatcaattctatccaaagctgaaccaaacacacacta 22605701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 30842151 - 30842236
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    |||||| |||||||| ||||||||| |  ||||||| ||| |  ||||||||||||  |||| |||||| |||||||||||||||||    
T  30842151 tgtatccaaacataa-tcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctc 30842236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 36150625 - 36150691
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    |||| |||||||||||| || ||||||||||||| ||| |  |||||||||| || |||||||||||    
T  36150625 tatccaaacataaatcactttacattcaactcacttttaatcaaaatcaattatatcaaaatcaatt 36150691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 40286302 - 40286411
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| |||||||||||| ||  || ||||||||  ||| |  |||||||||||||  | ||||| || |||||||||||||| | ||||||||| || |    
T  40286302 gtatccaaacataaatcatttttcactcaactcaattttaatcaaaatcaattctat-agaatcagttctatcaaaatcaattttgtccaccgcacaacc 40286400  T
Q  220 aaacacacact 230  Q
    |||||||||||    
T  40286401 aaacacacact 40286411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 46958085 - 46958135
Alignment:
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacac 227  Q
    ||||||||||| |||||||||||||| | ||||||||| || |||||||||    
T  46958085 caaaatcaattctatcaaaatcaattttttccaccgcacaaccaaacacac 46958135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 54488335 - 54488388
Alignment:
Q  4 aatttggtaagtaatgagttaaaaaattaatataatatatctaactaagattaaa 58  Q
    |||||| ||| |||||||| ||||||||||||||||||| |||||||| ||||||    
T  54488335 aatttgataattaatgagtaaaaaaattaatataatata-ctaactaaaattaaa 54488388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 38305247 - 38305210
Alignment:
Q  190 atcaaaatcaattctctccaccgcagaatcaaacacac 227  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  38305247 atcaaaatcaattttctccaccgcagaaccaaacacac 38305210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 38768488 - 38768553
Alignment:
Q  165 aatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||||||||||| ||||||||||| | ||| |||||||||| ||||  || ||| ||||||||||||    
T  38768488 aatcaattctatcaaaatcaattctgtcagaatcaattctatccaaagctgaaccaaacacacact 38768553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 205
Target Start/End: Complemental strand, 45780095 - 45779991
Alignment:
Q  100 agaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatca 199  Q
    ||||||||||||   | |||||||||||||| |||| |||||| |   ||||||| |||||| |||||||||| |  |||| |||||| |||| ||||||    
T  45780095 agaatcacttttaagtgaatgtatctaaacaaaaattaattcataccaaactcactttttaccaaaatcaatt-tctcaaactcaattctatcgaaatca 45779997  T
Q  200 attctc 205  Q
    ||||||    
T  45779996 attctc 45779991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 2326321 - 2326258
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacac 227  Q
    |||||||||| || || |||||||| ||||||||| |||||||  ||||||| ||||||||||||    
T  2326321 aaaatcaatttta-cataatcaattatatcaaaattaattctcctcaccgcacaatcaaacacac 2326258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 13863049 - 13862970
Alignment:
Q  92 aatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    |||| ||||||||||||||||  || |||||||||| ||| |||||||| | ||||||||||| ||| |  ||||||||||    
T  13863049 aattaataagaatcacttttgcattcatgtatctaagcat-aatcaatttatattcaactcacttttgatgaaaatcaatt 13862970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 16202558 - 16202518
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattc 203  Q
    |||||||||| || ||||||||||| |||||||||||||||    
T  16202558 aaaatcaattttatcaaaatcaattctatcaaaatcaattc 16202518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 19599601 - 19599487
Alignment:
Q  80 ccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttact-aaaatcaattctaaca 178  Q
    ||||||||| | |||| |||||||||| ||||   | | || ||| ||||||||||||||| ||||||||||||| ||||| | ||||||||||||  ||    
T  19599601 ccaaacaacataaattgataagaatcaattttaagtaattgcatccaaacataaatcaatt-acattcaactcac-ttttattcaaaatcaattctctca 19599504  T
Q  179 aaatcaattttatcaaa 195  Q
    || |||||| |||||||    
T  19599503 aactcaattctatcaaa 19599487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 20191698 - 20191658
Alignment:
Q  190 atcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||||||||||||| |  ||||||||||||||||||||||||    
T  20191698 atcaaaatcaatttttgccaccgcagaatcaaacacacact 20191658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 20191817 - 20191718
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  ||| |||||||||||| |||| | || || |||| |||  |  ||||||||||||||||||| ||||||  ||||||||||    
T  20191817 ttaaaattaattttgattcaagttatccaaacaacatgaaatgatgagcatcattttcataataatgtatctaaacataaaacaattc-tattcaactca 20191719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 26426153 - 26426089
Alignment:
Q  148 aactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    ||||||| ||| || |||||||||| |  |||| |||||| ||||||||||||||||| ||||||    
T  26426153 aactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccaccg 26426089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 31520436 - 31520328
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||||||||||||||| |||||||  |||||||| ||| || ||||| ||||||  |||| |  ||| || |||||||||||||| ||| |||   | ||    
T  31520436 tatctaaacataaatccattcacacccaactcacttttaaccaaaattaattctttcaaacttcattctaccaaaatcaattctcgccatcgctatacca 31520337  T
Q  221 aacacacac 229  Q
    |||||||||    
T  31520336 aacacacac 31520328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 33560566 - 33560530
Alignment:
Q  118 atgtatctaaacataaatcaattcacattcaactcac 154  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  33560566 atgtatctaaacataaaccaatttacattcaactcac 33560530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 232
Target Start/End: Complemental strand, 2483838 - 2483665
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgt-atctaaacataaatcaattcacattcaactcac 154  Q
    ||||| |||||| ||| ||| |||||||||||   |||| ||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||    
T  2483838 aaaatcaattttcatccaagttatccaaacaa---gaatatataagaatcacttttg-cttaaagttatccaaacataaatcaattcacattcaactcac 2483743  T
Q  155 cttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
     ||| |||||||||||||| ||||||||||||| | || ||||||||| ||||||||||||||  |||||||| ||||    
T  2483742 ttttaactaaaatcaattccaacaaaatcaattatgtccaaatcaattttctccaccgcagaactaaacacacgctaa 2483665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 3667837 - 3667994
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||  | || | |||| ||||||||||   | | |||||| ||||||||||||||||||||||||||||    
T  3667837 ttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 3667936  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccacc 211  Q
    | |||||  ||||||||||||  |||| |||||| |||||||||||||||||||||||    
T  3667937 ctttttaacaaaatcaattctctcaaactcaattctatcaaaatcaattctctccacc 3667994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 35760172 - 35760348
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||  | || | |||| ||||| ||||   | | |||||| ||||||||||||||||||||||||||||    
T  35760172 ttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcagttttaattgagtgtatccaaacataaatcaattcacattcaactca 35760271  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | |||||  ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  35760272 ctttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacacacact 35760348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 22482237 - 22482348
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||  ||||||||||| ||||||||||||||||| || ||||   |     
T  22482237 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccatac 22482336  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  22482337 caaacacacact 22482348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 228
Target Start/End: Complemental strand, 13253209 - 13253038
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || |||| |||||||| | || | |||||||||||||||   | | |||||| |||||||| |||||||| |||||||||||     
T  13253209 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttttaaatgagtgtatccaaacataa-tcaattcatattcaactcact 13253111  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacaca 228  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||  || ||||||||||    
T  13253110 tttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgccaccgcccaaccaaacacaca 13253038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 39988096 - 39987945
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    |||||| |||||||||| |||   ||||||||||| | || | |||||||||||||||   | | |||||| |||||||||||||||||| |  ||||||    
T  39988096 ttaaaagaaattttgatttaaatcatccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactca 39987997  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    | ||| || ||||||||||||  |||| |||||| |||||||||||||||||    
T  39987996 cttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctc 39987945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 32030740 - 32030875
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaa 196  Q
    ||||||||||||||||  | | | |||| ||||| ||||||||||||||  |||| || ||| || ||||||||||||  |||| |||||| ||||||||    
T  32030740 ataagaatcacttttgaataagtatatcaaaacaaaaatcaattcacatctaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaa 32030839  T
Q  197 tcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||||||||||||||| |   | ||||||||||||||    
T  32030840 tcaattctctccaccactataccaaacacacactaa 32030875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 228
Target Start/End: Complemental strand, 9275589 - 9275439
Alignment:
Q  78 atccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaac 177  Q
    ||||||||||| | || | |||||||||| |||| |   | |||||| ||||||||||||||| ||||  ||||||| ||| || ||||||||||||       
T  9275589 atccaaacaacatcaactcataagaatcaattttattaaagtgtatccaaacataaatcaattaacatctaactcacttttaaccaaaatcaattctctt 9275490  T
Q  178 aaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacaca 228  Q
    ||| ||||||||||||||||||||| || |||||||  || ||||||||||    
T  9275489 aaactcaattttatcaaaatcaattttccccaccgccaaaccaaacacaca 9275439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 41834940 - 41835050
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||||||||||||| | |||||||| ||| || ||||||||||||  |||| | |||| ||||||||||||||||| |||||||   |     
T  41834940 tgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctcaaactgaattctatcaaaatcaattctccccaccgccatac 41835039  T
Q  219 caaacacacac 229  Q
    |||||||||||    
T  41835040 caaacacacac 41835050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 240
Target Start/End: Original strand, 10058122 - 10058243
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||||||||||||  | |||||||| ||| || ||||||||| ||  |||| |||||| ||||||||||||||||| |||||||   |     
T  10058122 tgtatccaaacataaatcaattcatttccaactcacttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattctccccaccgccatac 10058221  T
Q  219 caaacacacactaaacctcttt 240  Q
     |||||||||||||||| ||||    
T  10058222 taaacacacactaaaccacttt 10058243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 24045885 - 24045972
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||||||||||||||||||||   |||||| ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||    
T  24045885 aaacataaatcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgc 24045972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 2694851 - 2694717
Alignment:
Q  92 aatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttat 191  Q
    |||| ||||||||||||||| | ||||  |||||||| |||||| |||| |   ||||||||| ||| || ||||||||||| | ||||||||||| |      
T  2694851 aattgataagaatcacttttatgttaagttatctaaaaataaattaatttatgatcaactcacttttaaccaaaatcaattcaatcaaaatcaattctga 2694752  T
Q  192 caaaatcaattctctccaccgcagaatcaaacaca 226  Q
    ||||||||||||||  ||||||| || ||||||||    
T  2694751 caaaatcaattctcgtcaccgcataaccaaacaca 2694717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 204
Target Start/End: Complemental strand, 33468113 - 33467971
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    ||||||||||| | | ||||||||||  | |||| |||||||||| || ||  | || ||||| ||||| ||||||||  ||| ||||||||| ||| ||    
T  33468113 aattttgatctcaaccatccaaacaaaataaattaataagaatcatttctgcataaaggtatccaaacacaaatcaatatacactcaactcacttttaac 33468014  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
     ||||||| ||||| ||||||||||||| | ||||||||||||    
T  33468013 caaaatcagttctatcaaaatcaattttgttaaaatcaattct 33467971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 2430423 - 2430267
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | ||||||||||||| | |   | |||||| |||||||| ||||||||  ||||||||||     
T  2430423 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattgaagtgtatccaaacataa-tcaattcatgttcaactcact 2430325  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||| || ||||||||||||  |||| ||||||  |||||||| ||||||| |||||||    
T  2430324 tttaaccaaaatcaattctctcaaactcaattccatcaaaatgaattctcgccaccgc 2430267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 230
Target Start/End: Original strand, 7178769 - 7178936
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||||||  || ||| ||||||||| | |||| |||||||||| ||||   ||| |||||| ||||||||||||||| |||||||||||| ||||||     
T  7178769 aattttgattcaaactacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactca-cttttag 7178866  T
Q  162 t-aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | ||||| ||||||  |||| |||||| ||||||| |||||| ||  || ||| ||| ||||||||||||    
T  7178867 tcaaaattaattctctcaaactcaattctatcaaactcaattatcatcatcgccgaaccaaacacacact 7178936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 40495422 - 40495337
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||| ||||||||||||||| ||||  ||||||| ||| || |||||||||| || |||| |||||| ||||||||||||||||    
T  40495422 tgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattct 40495337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 8049137 - 8049029
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaa 196  Q
    |||||||||||||||   | | |||||| ||||||||||||||| || |  ||||||| ||| || ||||||||||||  |||| |||||| ||||||||    
T  8049137 ataagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaa 8049038  T
Q  197 tcaattctc 205  Q
    |||||||||    
T  8049037 tcaattctc 8049029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 22811056 - 22811144
Alignment:
Q  102 aatcacttttgtctt-aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||||||| || || ||||| |||||||||||| || ||||||||||||| ||| || ||||||||||||| ||| |||||||||    
T  22811056 aatcacttttgttttgaaggtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctaccaagatcaatttt 22811144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 231
Target Start/End: Original strand, 32454522 - 32454697
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||     | |||||| |||||||| ||||||||| |  |||||||     
T  32454522 aaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcact 32454620  T
Q  156 ttttactaaaatcaattctaacaaaatcaatttta-tcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
    ||| || ||||||||||||  |||| |||||| || ||||||||||||||| |||||||   | |||||||||||||    
T  32454621 tttaaccaaaatcaattctctcaaactcaattctaatcaaaatcaattctcgccaccgccataccaaacacacacta 32454697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 34107068 - 34106928
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||||||  || |||| |||||||| | |||| |||||||| ||||||   | ||||||| ||||||| |||||||||||||  ||||||| ||| ||    
T  34107068 aattttgattcaacctattcaaacaacattaattcataagaattacttttaaatgaatgtatttaaacattaatcaattcacatctaactcacttttaac 34106969  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
     |||| |||||||   ||| |||||| ||||||||||||||    
T  34106968 caaaaacaattcttttaaactcaattctatcaaaatcaatt 34106928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 7386053 - 7385910
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    ||||||||| |||  |||||||||||| | || | |||||||||||||||   | | ||||| ||||||||||||||||||| |  ||| ||| ||| ||    
T  7386053 aattttgatttaaattatccaaacaacatcaactcataagaatcacttttaaataagtgtatttaaacataaatcaattcacctcaaacccacttttaac 7385954  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
     ||||||||||||   ||| | |||| |||||||||||||||||    
T  7385953 caaaatcaattctctaaaacttaattctatcaaaatcaattctc 7385910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 23914318 - 23914215
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||| |||||||||||| || |||||||  ||| | || ||||||||||  ||||||||||| |||||||||||||| | ||||||||  |||    
T  23914318 tgtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaattctatcaaaatcaattatgtccaccgccaaat 23914219  T
Q  219 caaa 222  Q
    ||||    
T  23914218 caaa 23914215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 40885266 - 40885373
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    |||||||||||||||||||| |||||||| ||| |  ||||||||||||   ||| |||||| || ||||||||||| || |||||||   | |||||||    
T  40885266 aaacataaatcaattcacatccaactcacttttaatcaaaatcaattctcttaaactcaattctaacaaaatcaattttcaccaccgccataccaaacac 40885365  T
Q  226 acactaaa 233  Q
    ||||||||    
T  40885366 acactaaa 40885373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 5710449 - 5710339
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| ||||||||| |||||||||   ||||||| ||| || ||||||||||||  |||| || ||| ||||||||||||||||| |||||||   | |    
T  5710449 gtatccaaacataaagcaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattctcgccaccgccatacc 5710350  T
Q  220 aaacacacact 230  Q
    |||||||||||    
T  5710349 aaacacacact 5710339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 19784868 - 19784966
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaaca 224  Q
    ||||||||| || || ||||||||||||| ||| || ||||||||||| || ||||||||||  ||||||||||||| | | ||||||| || ||||||    
T  19784868 aaacataaaccactttacattcaactcacttttaaccaaaatcaattcaaataaaatcaattcaatcaaaatcaattatattcaccgcataaccaaaca 19784966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 4292197 - 4292282
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||| |||||||||||||||||||||||||| |  ||| |  ||||||||||||  |||| | |||| ||||||||||||||||    
T  4292197 tgtatccaaacataaatcaattcacattcaacttatttttaatcaaaatcaattctctcaaacttaattctatcaaaatcaattct 4292282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 4569208 - 4569089
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtctt--aatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||| |||||| ||| ||  |||||||||||||||| ||||||||||||||||||| |||   || |||| ||| || |||||||||||| ||||||||    
T  4569208 aaaatcaatttttatcaaaattatccaaacaacgtgattttataagaatcacttttgacttgatatttatccaaatat-aatcaattcacactcaactca 4569110  T
Q  154 ccttttactaaaatcaattct 174  Q
    | ||| |  ||||||||||||    
T  4569109 cttttaatcaaaatcaattct 4569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 27021183 - 27021288
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    ||||||||||||||||||||| ||||||  ||| || |||||||||| |  |||| |||||| ||||||||||| ||||  |||||||  || |||||||    
T  27021183 aaacataaatcaattcacatttaactcatttttaaccaaaatcaattttctcaaactcaattatatcaaaatcagttctaaccaccgccaaaccaaacac 27021282  T
Q  226 acacta 231  Q
    | ||||    
T  27021283 atacta 27021288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 41740720 - 41740564
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| ||| ||||||||||||| | || | |||| ||||||||||     | |||||  ||||||||| |||||||  |  ||||||||    
T  41740720 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaatcacttttaaacaagtgtattcaaacataaaccaattcatctcaaactcacc 41740621  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    | | |  ||||||||||||  |||| |||||| ||||||||||||||||| ||||||    
T  41740620 tataatcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccg 41740564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 202
Target Start/End: Original strand, 7714945 - 7715071
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || |||||||||||| |||    | | ||| || ||||||| ||||||||| ||  ||||||| ||| || ||||||||||||     
T  7714945 ctatccaaacaacatcaacttataagaatcaatttcaagtgagtgtgtcaaaacatatatcaattcatatctaactcacttttaaccaaaatcaattctc 7715044  T
Q  176 acaaaatcaattttatcaaaatcaatt 202  Q
     |||| |||||| ||||||||||||||    
T  7715045 tcaaactcaattctatcaaaatcaatt 7715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 35847910 - 35847840
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    |||||||||||   |||| |||||| ||||||||||||||||   |||||||||| |||||||||||||||    
T  35847910 aaaatcaattcactcaaactcaattctatcaaaatcaattctactcaccgcagaaccaaacacacactaaa 35847840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 38265068 - 38265109
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  38265068 aaaatcaattcta-caaaatcaattttatcaaaatcaattctc 38265109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 2861663 - 2861798
Alignment:
Q  93 atttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatc 192  Q
    |||||||||||||||||||  | || | |||| ||||||||||||||| |||| ||| |||  ||| ||| ||||||||| || ||||||||||| |||     
T  2861663 atttataagaatcactttta-catattatatccaaacataaatcaatttacatgcaagtcatttttaactcaaatcaattatatcaaaatcaattctatt 2861761  T
Q  193 aaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||  |||||| |||| | || |||| ||||||||||||    
T  2861762 aacctcaattatctcga-cgtagaaccaaacacacact 2861798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 2868435 - 2868335
Alignment:
Q  102 aatcacttttgt-cttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaa 200  Q
    |||||||||||| |||||   ||| |||| ||||||| || ||||||||||||| ||| ||||||||||||||| ||||||| |||| ||  ||||||||    
T  2868435 aatcacttttgttcttaaaacatccaaacttaaatcactttacattcaactcacttttaactaaaatcaattct-acaaaattaattctactaaaatcaa 2868337  T
Q  201 tt 202  Q
    ||    
T  2868336 tt 2868335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 24036628 - 24036689
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    |||||||||||| || ||||||||||||| ||| |  ||||||||||||| |||||||||||    
T  24036628 aaacataaatcattttacattcaactcacttttcatcaaaatcaattctatcaaaatcaatt 24036689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 20068942 - 20069030
Alignment:
Q  99 aagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    ||||||||||||||  ||| |||||| |||||||||| |||| | | ||||||||| ||| || ||||||||||| | |||| ||||||    
T  20068942 aagaatcacttttgcattagtgtatccaaacataaataaatttaaactcaactcacttttgaccaaaatcaattcgatcaaactcaatt 20069030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 33953965 - 33953883
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||| |||||||| |||||| || |||||||||| ||| | |||||||||||||  |||| |||||| || |||||||||||    
T  33953965 tgtatccaaacataa-tcaatttacgttcaactcacttttaaataaaatcaattctctcaaactcaattctaccaaaatcaatt 33953883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 41741643 - 41741573
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||||||||||||| ||||||||||| ||||| |||||||| | ||||  || |||  ||||||||||||||    
T  41741643 aaaatcaattctatcaaaatcaattctatcagaatcaattatatccaaagctgaacaaaacacacactaaa 41741573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 4295625 - 4295690
Alignment:
Q  165 aatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||||||||||| ||||||||||| | |||||||||||||| || |   | ||||||||||||||||    
T  4295625 aatcaattctatcaaaatcaattctgtcaaaatcaattctatctaaaactgaatcaaacacacact 4295690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 19204010 - 19203957
Alignment:
Q  178 aaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
    |||||||||| || ||||||||||||||  ||||||| || |||||||||||||    
T  19204010 aaaatcaattctaccaaaatcaattctcgtcaccgcataaccaaacacacacta 19203957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 40791132 - 40791048
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||||| |||||||| |||||||| ||  ||||||| ||| || |||||||||| |  |||| |||||| |||||||||||||||||    
T  40791132 gtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctc 40791048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 42146357 - 42146441
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||||| |||||||| |||||||| ||  ||||||| ||| || |||||||||| |  |||| |||||| |||||||||||||||||    
T  42146357 gtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctc 42146441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 41039556 - 41039488
Alignment:
Q  165 aatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    |||||||| |||||||||||||| | ||| |||||||||| || |  || ||| |||||||||||||||    
T  41039556 aatcaattttaacaaaatcaattctgtcagaatcaattctatctaaagctgaaccaaacacacactaaa 41039488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 78 - 227
Target Start/End: Complemental strand, 34433413 - 34433263
Alignment:
Q  78 atccaaacaacgtgaatttataagaatcacttttgtcttaat-gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    ||||||||||| ||||||||||||||||||||||  ||| || ||||| ||||||||||||||||||||||||||||| ||| |  ||||||||||||      
T  34433413 atccaaacaacatgaatttataagaatcactttttactttattgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctgt 34433314  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacac 227  Q
    |||| |||||| |||||||||||||||||| |||||| ||| |||||||||    
T  34433313 caaactcaattctatcaaaatcaattctcttcaccgctgaaccaaacacac 34433263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 18511082 - 18511249
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| |||  |||||||||||| | | ||||||||||||| ||||   || ||||||| ||||||||||||||| ||||| || ||||     
T  18511082 aaaatcaattttgatttaaattatccaaacaacatcactttataagaatcatttttacattgatgtatccaaacataaatcaattaacatttaaatcact 18511181  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaac 223  Q
    ||| || |||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  18511182 tttaaccaaaatcaattatatcaaaatcaattttatcaaaatcaattctctccaccgctgaaccaaac 18511249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 62 - 232
Target Start/End: Original strand, 3853886 - 3854056
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||||||  || ||||||||||||| |  ||| |||||||||| ||||   | |||||||| ||||||||||||||| ||||||||||||| ||| |     
T  3853886 aattttgattcaaactatccaaacaacatagattgataagaatcaattttacatgaatgtatccaaacataaatcaatttacattcaactcacttttaat 3853985  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
     ||||||||||||| |||||||||||  |||||| ||||||||| | |||||| || ||||||||||||||    
T  3853986 caaaatcaattctatcaaaatcaattccatcaaactcaattctcgctaccgcacaaccaaacacacactaa 3854056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 229
Target Start/End: Original strand, 2213484 - 2213659
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||  | || | |||| ||||||||||   | | |||||| ||||||||||||||||||||||||||||    
T  2213484 ttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 2213583  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    | |||||  ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | |||||||||||    
T  2213584 ctttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacacacac 2213659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 231
Target Start/End: Complemental strand, 9988609 - 9988454
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || | ||| |||||||||||   | | |||||| |||||||||||||||||||| |||||||| ||| || ||||||||||||     
T  9988609 ctatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctc 9988510  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
     |||| |||||| ||||||||||||||||| |||||||  || |||||||||||||    
T  9988509 tcaaactcaattctatcaaaatcaattctccccaccgccaaaccaaacacacacta 9988454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 229
Target Start/End: Complemental strand, 28127417 - 28127242
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||  | || | |||| ||||||||||   | | |||||| ||||||||||||||||||||||||||||    
T  28127417 ttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 28127318  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    | |||||  ||||||||||||  |||| | |||| ||||||||||||||||| |||||||   | |||||||||||    
T  28127317 ctttttagcaaaatcaattctctcaaactaaattctatcaaaatcaattctccccaccgctataccaaacacacac 28127242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 1945104 - 1944993
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||  |||| |||||| ||||||||||||||||| || ||||   |     
T  1945104 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccatac 1945005  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  1945004 caaacacacact 1944993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 229
Target Start/End: Complemental strand, 25748003 - 25747837
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||||||  || ||| ||||||||| | |||| |||||||||| ||||   ||| |||||| ||||||||||||||| ||||||||||||| ||| |     
T  25748003 aattttgattcaaactacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttaat 25747905  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
     ||||||||||||  |||| |||||| ||||||| |||||| || ||||||| ||| |||||||||||    
T  25747904 caaaatcaattctctcaaactcaattctatcaaactcaattatcaccaccgcggaaccaaacacacac 25747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 229
Target Start/End: Complemental strand, 39141597 - 39141425
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||| ||||   | | |||||| |||||||| |||||||| || ||||||||     
T  39141597 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaatgagtgtatccaaacataa-tcaattcatatccaactcact 39141499  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||  || |||||||||||    
T  39141498 tttaaccaaaatcaattctttcaaactcaattatatcaaaatcaattctcgccaccgcccaaccaaacacacac 39141425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 7472801 - 7472646
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||   | | |||||| |||||||| |||||||||||  |||||||     
T  7472801 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacataa-tcaattcacatcaaactcact 7472703  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| ||||||    
T  7472702 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccg 7472646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 1763264 - 1763370
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    |||||||||||||||||| || | ||||||||||  ||| || |||||||||| || |||||||||||||||||||||||||||||  ||||||| || |    
T  1763264 gtatctaaacataaatcactttaaattcaactcaattttaaccaaaatcaatttta-caaaatcaattttatcaaaatcaattctcgtcaccgcacaacc 1763362  T
Q  220 aaacacac 227  Q
    ||||||||    
T  1763363 aaacacac 1763370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 229
Target Start/End: Complemental strand, 3602567 - 3602415
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| |||||| |||| |||||||||| | ||||| |||| |||||||| |||||| |  |||||||||| |||    |||||||||||||    
T  3602567 ctatccaaacaacatgaattaataaaaatcacttttattttaatatatccaaacataattcaatt-aagttcaactcacttttagacaaaatcaattcta 3602469  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
     |||||||||||   | |||||||||| ||  |||||||||| |||||||||||    
T  3602468 tcaaaatcaattcagtaaaaatcaattttcatcaccgcagaaccaaacacacac 3602415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 12110895 - 12111027
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaa 196  Q
    |||| |||||||| ||| || | ||||| |||||||||||| || | ||||||||||| ||| || |||||||||| | |||||||||||| ||||||||    
T  12110895 ataaaaatcacttatgttttgaagtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaa 12110993  T
Q  197 tcaattctctccaccgcagaatcaaacacacact 230  Q
    |||||| ||  ||||||| || ||||||||||||    
T  12110994 tcaattttcgtcaccgcacaaccaaacacacact 12111027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 31224725 - 31224806
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||| |||||||||||||||||||| |||||||| ||| |||||||||||||||  |||| |||||| ||||||||||||||    
T  31224725 tatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaattctatcaaaatcaatt 31224806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 204
Target Start/End: Original strand, 16467066 - 16467214
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||||||| |||||||||| || | ||   |||||||||||||||   |||   |||| ||||||||||||||| ||||  |||||||     
T  16467066 aaaattaattttgatctaaactatccaaactacatcaacccataagaatcacttttacattatcatatccaaacataaatcaatttacatctaactcact 16467165  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    ||| || |||||||||| |  ||||||||||| ||||||||||||||||    
T  16467166 tttaaccaaaatcaattatgccaaaatcaattctatcaaaatcaattct 16467214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 28261272 - 28261448
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || |||| |||||||| | || | ||||||||||||| | | | |  ||||| ||| |||||||||||||||| |||||||    
T  28261272 ttaaaattaattttgattcaaactattcaaacaacatcaactcataagaatcacttctatgtgagagtatccaaatataaatcaattcacatccaactca 28261371  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    | ||| |  ||||||||||||  |||| |||||| ||| ||||| |||||||||||||||  |  ||||||||||||    
T  28261372 cttttaagcaaaatcaattctctcaaactcaattgtattaaaattaattctctccaccgcccacccaaacacacact 28261448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 30007611 - 30007527
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccac 210  Q
    ||||||||||||||||||||||||||||| ||| || ||||| ||||||  |||| |||||| ||||||||||||||||| ||||    
T  30007611 aaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctccccac 30007527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 36312320 - 36312431
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||| |||||||||||||||||||| ||| || ||||||||||||  |||||| |||| ||||||||||||||||| || ||||   |     
T  36312320 tgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattctccccgccgccatac 36312418  T
Q  219 caaacacacacta 231  Q
    |||||||||||||    
T  36312419 caaacacacacta 36312431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 5916306 - 5916196
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||| |||||||||||||||||||| ||| || ||||||||||||  |||||| |||| ||||||||||||||||| || ||||   |     
T  5916306 tgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattctccccgccgccatac 5916208  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  5916207 caaacacacact 5916196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 23360013 - 23359925
Alignment:
Q  102 aatcacttttgtctt-aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||||||| || || ||||| |||||||||||| || ||||||||||||| ||| || ||||||||||||| |||||||||||||    
T  23360013 aatcacttttgttttgaaggtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctaccaaaatcaatttt 23359925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 42089591 - 42089479
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||| ||||||||||||||||||||||||||||| ||| |  ||||||||||||    || | |||| |||||||||||||| ||  ||||||  |||||    
T  42089591 tatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctcttgaacttaattctatcaaaatcaattttcatcaccgccaaatca 42089492  T
Q  221 aacacacactaaa 233  Q
    |||||||||||||    
T  42089491 aacacacactaaa 42089479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 42516027 - 42515947
Alignment:
Q  133 aatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| |||||| |||||||||||||| ||||||||||    
T  42516027 aatcaattcacatcaaactcacttttaactaaaatcaattctctcaaactcaattatatcaaaatcaattttctccaccgc 42515947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 2213668 - 2213778
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaa 196  Q
    |||||||||||||||   | | |||||| ||| | ||||||||||||||  ||||||| ||| || ||||||||||||  |||| |||||| ||||||||    
T  2213668 ataagaatcacttttaaataagtgtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaa 2213767  T
Q  197 tcaattctctc 207  Q
    |||||||||||    
T  2213768 tcaattctctc 2213778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 2215295 - 2215409
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||||||||||||| |  ||||||| ||| || ||||||||||||  |||  |||||| ||||||||||||||||| | |||||   |     
T  2215295 tgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaattctatcaaaatcaattctcacaaccgctatac 2215394  T
Q  219 caaacacacactaaa 233  Q
    |||||||||||||||    
T  2215395 caaacacacactaaa 2215409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 26208035 - 26207911
Alignment:
Q  78 atccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaac 177  Q
    ||||||||||| | || || ||||||||| ||||   | | |||||| |||||||||||||||||||| ||||| || ||| || |||| |||||||  |    
T  26208035 atccaaacaacatcaacttgtaagaatcaattttaattaagtgtatcaaaacataaatcaattcacatccaactgacttttaaccaaaaccaattctctc 26207936  T
Q  178 aaaatcaattttatcaaaatcaatt 202  Q
    ||||| |||| ||||||||||||||    
T  26207935 aaaattaattctatcaaaatcaatt 26207911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 230
Target Start/End: Complemental strand, 30600010 - 30599858
Alignment:
Q  78 atccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaac 177  Q
    ||||||||||  | |||| |||||||||| || ||  | || ||||| ||||| ||||||||| ||| ||||||||| ||| || ||||||||||||| |    
T  30600010 atccaaacaaaataaattaataagaatcatttatgcataaaggtatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaattctatc 30599911  T
Q  178 aaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||||| |||||| | | ||||||||||  |||||||  || |||||| |||||    
T  30599910 aaaattaattttgttagaatcaattctaaccaccgccaaaccaaacatacact 30599858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 8170356 - 8170466
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||| |||||| ||||||||||||| ||| |  ||||||||||||  |||| |||||| ||||||||| ||||||| |||||||   |     
T  8170356 tgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaattaattctcgccaccgccctac 8170454  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  8170455 caaacacacact 8170466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 232
Target Start/End: Original strand, 28641643 - 28641798
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    |||||||||||| | || |||||| ||||||||||   | ||  || | ||| |||||||||||||||| |||||||| ||| || ||||||||||||      
T  28641643 tatccaaacaacatcaacttataataatcacttttaaatgaagttacccaaatataaatcaattcacatccaactcacatttaaccaaaatcaattctct 28641742  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    || ||||||||  || |||||||||| | |||| |||  || ||||||||||||||    
T  28641743 cagaatcaattcaattaaaatcaattttatccatcgccaaaccaaacacacactaa 28641798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 44619126 - 44619015
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||||||||||| | |  ||||||| ||| || ||||||||||||  |||| |||||| ||||||||||||||||| ||| ||    ||    
T  44619126 tgtatccaaacataaatcaattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccatcggtatat 44619027  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  44619026 caaacacacact 44619015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 202
Target Start/End: Original strand, 7296135 - 7296281
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||  ||| ||||||||| ||| | || | || | |||||||||| | | | |||||| ||||||||||||||||||||  ||||||      
T  7296135 aaaatcaattttgacttaaactatccaaataacatcaagtcatgataatcacttttatatgagtgtatccaaacataaatcaattcacatcaaactcatt 7296234  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||| || ||||||||||||  |||| |||||| ||||||| ||||||    
T  7296235 tttaaccaaaatcaattctctcaaactcaattatatcaaagtcaatt 7296281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 11240671 - 11240820
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    |||||||||||||  |||||| ||||||||| || |   | |||||||  ||||||||||||||||||||||||||| | |||| |  ||||||||| |     
T  11240671 ctatccaaacaacaagaatttttaagaatcaattctaagtgaatgtattcaaacataaatcaattcacattcaactcgcttttttc-caaatcaattttg 11240769  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacaca 226  Q
      |||  |||||  ||||||||||||||||||||| || ||| ||||||||    
T  11240770 ttaaacccaattaaatcaaaatcaattctctccacggctgaaccaaacaca 11240820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 36548243 - 36548353
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| ||||||||||||||||||||   |||||| ||| |  ||||||||||||  |||| |||||| |||||||||||||| || |||||||   | |    
T  36548243 gtatccaaacataaatcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccatacc 36548342  T
Q  220 aaacacacact 230  Q
    |||||||||||    
T  36548343 aaacacacact 36548353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 45714733 - 45714648
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    |||||| ||||||||||||||||||||  ||||||  ||| |  ||||||||||||  |||| |||||| ||||||||||||||||    
T  45714733 tgtatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaattatatcaaaatcaattct 45714648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 43858320 - 43858164
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||  |||||| ||||||||||||||     ||||| ||| |||||||||||||||     ||||||||| |||  | ||||||||||| |    
T  43858320 ctatccaaacaatatgaattgataagaatcactttcacaataatgcatccaaacataaatcaattattcatcaactcacttttgcccaaaatcaattcaa 43858221  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
      |||||||||| |||||||||||||| |  |||||||| ||  ||||| |||||||    
T  43858220 ttaaaatcaattctatcaaaatcaattatacccaccgcataactaaacatacactaa 43858164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 9537076 - 9537151
Alignment:
Q  114 cttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    ||||||||||||||||||||||||| |  | || ||||||  ||||||||||||||||||||  ||| ||||||||    
T  9537076 cttaatgtatctaaacataaatcaagttgctttaaactcattttttactaaaatcaattctataaaactcaatttt 9537151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 14821206 - 14821288
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||| |||||||| |||||||||||| ||||||| ||| ||||||||||||||   |||| |||||| ||||||||| ||||    
T  14821206 tgtatccaaacataa-tcaattcacattaaactcacttttaactaaaatcaattcactcaaactcaattctatcaaaattaatt 14821288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 27911451 - 27911517
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    |||| ||||||||||||||||||||  ||||||| ||| || ||| ||||||||| |||||||||||    
T  27911451 tatccaaacataaatcaattcacatcaaactcacttttaaccaaactcaattctatcaaaatcaatt 27911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 31562738 - 31562660
Alignment:
Q  133 aatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccacc 211  Q
    ||||||||||| |  || |||| ||| || ||||||||||||  |||| |||||||||||||||||||||||| |||||    
T  31562738 aatcaattcacctcaaattcacttttaaccaaaatcaattctctcaaactcaattttatcaaaatcaattctcgccacc 31562660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 41580817 - 41580691
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    ||||||||||||   |||| |||||||||| ||||||     |||||| |||||||||| |||| ||||  ||||||| ||| || ||||||||||||      
T  41580817 tatccaaacaactataattcataagaatcatttttgtacatgtgtatccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctct 41580718  T
Q  177 caaaatcaattttatcaaaatcaattc 203  Q
    |||| ||||||  ||||||||||||||    
T  41580717 caaactcaattcgatcaaaatcaattc 41580691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 32502027 - 32502111
Alignment:
Q  117 aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||||| |||||||| ||||||||| |  ||||||| ||| || ||||||||||||  |||| |||||| ||||||||||||||    
T  32502027 aatgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 32502111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 38600565 - 38600424
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||| ||||||  |||| |||||||   ||||||||| ||||||||||||   | |||||  ||||||||||||||| ||||  ||||||| ||| ||    
T  38600565 aattttaatctaaagtatctaaacaactataatttataataatcacttttgtacaagtgtattcaaacataaatcaatttacatcaaactcacttttaac 38600466  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaattc 203  Q
     ||||||||||||  |||| | ||||  |||||||| |||||    
T  38600465 caaaatcaattctctcaaacttaattcgatcaaaattaattc 38600424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 34997294 - 34997218
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||||||||||||||||| ||| |||  ||| || |||||||||| |  |||| | |||||||||||||||||||    
T  34997294 aaacataaatcaattcacatccaattcatttttaacaaaaatcaattttgtcaaactaaattttatcaaaatcaatt 34997218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 28206765 - 28206820
Alignment:
Q  117 aatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    |||||| |||||||||||| |||| ||||||||||||| ||| ||| |||||||||    
T  28206765 aatgtacctaaacataaattaatttacattcaactcacatttaactgaaatcaatt 28206820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 7474196 - 7474265
Alignment:
Q  164 aaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    |||||||||||  ||||||||||| | ||| |||||||||| ||||  || ||| |||||||||||||||    
T  7474196 aaatcaattctctcaaaatcaattctgtcagaatcaattctatccaaagctgaaccaaacacacactaaa 7474265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 232
Target Start/End: Original strand, 253099 - 253275
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||  || || ||||| ||||||||||||||||| || ||||||||     
T  253099 aaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcaca 253198  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    ||| || ||||||||||||  |||| |||||| |||||||||||||||||||| ||||  || ||||||||||||||    
T  253199 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccgccgcccaaccaaacacacactaa 253275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 1312549 - 1312395
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | ||||| ||||||||| || |   | ||||||||  ||||||||||||||| |||||||||||| ||| || |||||||||| ||    
T  1312549 ctatccaaacaacattaatttttaagaatcaattctaagtcaatgtatccgaacataaatcaattcgcattcaactcacttttaaccaaaatcaatttta 1312450  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
     |||| || ||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  1312449 tcaaactcgattctatcaaaatcaattttctccaccgctgaaccaaacacacact 1312395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 232
Target Start/End: Complemental strand, 5584171 - 5584003
Alignment:
Q  63 attttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttact 162  Q
    |||||||| |||  |||||||||||| ||||||  ||| |||||||| | | | ||| |||| ||||||||||||||| ||||| ||||||| ||||| |    
T  5584171 attttgatttaaattatccaaacaacttgaattggtaaaaatcacttctatataaatatatccaaacataaatcaatt-acattaaactcac-ttttagt 5584074  T
Q  163 -aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
     ||||||||||||  ||||||||||| |||||||||||||||||  |||||||||| | ||||||||||||    
T  5584073 caaaatcaattctgtcaaaatcaattctatcaaaatcaattctcgtcaccgcagaacctaacacacactaa 5584003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 229
Target Start/End: Original strand, 10826060 - 10826235
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||  | || | |||||||||||||||   | | | |||| ||||| ||||||||||| ||||||||||    
T  10826060 ttaaaattaattttgattcaaactatccaaacaaaatcaactcataagaatcacttttaaataagtatatccaaacaaaaatcaattcaaattcaactca 10826159  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    | ||| || ||||||||||||  |||| |||||||||||||||| ||||||| || ||||  || |||||||||||    
T  10826160 cttttaaccaaaatcaattctctcaaactcaattttatcaaaattaattctcaccgccgccaaaccaaacacacac 10826235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 17830065 - 17829974
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccac 210  Q
    |||| ||||||||||||||||||||||||||||||| ||| || ||||||||||||  |||| |||||| ||||||||||||||||| ||||    
T  17830065 tgtaactaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccac 17829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 699598 - 699698
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    ||||||||||||||||  || |||||||| ||| |||||||||||||||  |||| |||||| ||||||||||||||| ||||||||| |||||||||||    
T  699598 aaacataaatcaattcttatccaactcac-tttaactaaaatcaattctttcaaactcaattctatcaaaatcaattccctccaccgccgaatcaaacac 699696  T
Q  226 ac 227  Q
    ||    
T  699697 ac 699698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 56 - 231
Target Start/End: Complemental strand, 33899135 - 33898960
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| ||| | |||||||||   | || | |||||||||||||||   ||| |||||| ||||||||||||||||| ||  |||||||     
T  33899135 aaaatcaattttgatttaaaccatccaaacattattaactcataagaatcacttttacattagtgtatccaaacataaatcaattcatatcaaactcact 33899036  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
    ||| |  ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | |||||||||||||    
T  33899035 tttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 33898960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 16122125 - 16121985
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    ||||||||||| | ||||||||||||  | |||| ||||||||||||| |   | || ||||  ||||| ||||||| | ||| |||| |||| ||| ||    
T  16122125 aattttgatctcaactatccaaacaaaataaattaataagaatcacttatacataaaggtattcaaacacaaatcaacttacactcaaatcacttttaac 16122026  T
Q  162 taaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
     ||||||||||||| ||||||||||||||||||||||||||    
T  16122025 caaaatcaattctatcaaaatcaattttatcaaaatcaatt 16121985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 233
Target Start/End: Complemental strand, 21254982 - 21254832
Alignment:
Q  82 aaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaa 181  Q
    ||||||| | |||| |||||||||| ||||   ||| |||||| ||||||||||||||| ||||||||||||| ||| |  ||| ||||||||  ||||     
T  21254982 aaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttaatcaaattcaattctctcaaac 21254884  T
Q  182 tcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    |||||| ||||||| |||||| || ||||||  ||| |||||||||||||||    
T  21254883 tcaattctatcaaactcaattatcaccaccgtggaaccaaacacacactaaa 21254832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 230
Target Start/End: Complemental strand, 6208192 - 6208019
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||| ||||||| | || | |||||||||||||||     | |||||| |||||||| ||||||||||||||||||||     
T  6208192 aaaattaattttgattcaaactatctaaacaacatcaactcataagaatcacttttagtaaagtgtatccaaacataa-tcaattcacattcaactcact 6208094  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||| |  |||||||||||   ||||||||||| |||||||||||||| || |||||||   | ||||||||||||    
T  6208093 tttaatcaaaatcaattcactcaaaatcaattctatcaaaatcaattatcgccaccgctataccaaacacacact 6208019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 230
Target Start/End: Original strand, 13739177 - 13739350
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||     | |||||| |||||||| ||||||||| |  |||||||     
T  13739177 aaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcact 13739275  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  13739276 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 13739350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 230
Target Start/End: Original strand, 13744677 - 13744850
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||     | |||||| |||||||| ||||||||| |  |||||||     
T  13744677 aaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcact 13744775  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | ||||||||||||    
T  13744776 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 13744850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 29399855 - 29399766
Alignment:
Q  123 tctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||| ||| |||||||||| ||||||||| ||  ||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  29399855 tctacacaaaaatcaattc-cattcaacttactctttaccaaaatcaattctatcaaactcaattctatcaaaatcaattctctccaccgc 29399766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 16442417 - 16442349
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    |||||| ||||||||||||||||||||||||||||| | | |||||||||||||||  |||||||||||    
T  16442417 tgtatccaaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaatt 16442349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 3605811 - 3605708
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    |||||||||||| ||  || ||||||||| ||| |  ||||||||||||| ||||||||||| |||||||||||||| | |||||| || || |||||||    
T  3605811 aaacataaatcacttttcactcaactcacttttaatcaaaatcaattcta-caaaatcaattatatcaaaatcaattttgtccaccacacaaccaaacac 3605713  T
Q  226 acact 230  Q
    |||||    
T  3605712 acact 3605708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 29409381 - 29409225
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||| ||||     | |||||| ||||||||||||||||||||  |||||||     
T  29409381 aaaattaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaaaaactgtatccaaacataaatcaattcacatcaaactcact 29409282  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    ||| |  ||||||||||||  |||| |||||| ||| |||||||||| || ||||||    
T  29409281 tttaatcaaaatcaattctttcaaactcaattctattaaaatcaattttcgccaccg 29409225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 16548173 - 16548228
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattct 174  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  16548173 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 16548228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 21455933 - 21455998
Alignment:
Q  138 attcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattc 203  Q
    |||||||| ||||| || ||| ||||||||||||||| ||||| |||||| |||||||||||||||    
T  21455933 attcacatccaacttacttttaactaaaatcaattcttacaaactcaattatatcaaaatcaattc 21455998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 26274691 - 26274581
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaa-aatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||||||||||||  |||| ||||||||||||| ||||| | | |||||||| |  ||||||||||| |||||||||||||||||    |||||||| |    
T  26274691 tatctaaacataaacgaatt-acattcaactcac-ttttagtcagaatcaattatgtcaaaatcaattctatcaaaatcaattctcgttgccgcagaacc 26274594  T
Q  220 aaacacacactaa 232  Q
    |||||||||||||    
T  26274593 aaacacacactaa 26274581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 29682144 - 29682271
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    ||||||||||| | | ||||||||||  | |||| ||||||||||||| ||  | || ||||| ||||| ||||||||| |||  |||||||  ||| ||    
T  29682144 aattttgatctcaaccatccaaacaaaataaattaataagaatcacttctgcataaaagtatccaaacacaaatcaatttacacgcaactcaattttaac 29682243  T
Q  162 taaaatcaattctaacaaaatcaatttt 189  Q
     ||||||||||||| |||||| ||||||    
T  29682244 caaaatcaattctatcaaaattaatttt 29682271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 15151528 - 15151461
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    |||||||||||   |||| |||||| ||||||||||||||||   |||||||||| ||||||||||||    
T  15151528 aaaatcaattcactcaaactcaattctatcaaaatcaattctactcaccgcagaaccaaacacacact 15151461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 10874290 - 10874222
Alignment:
Q  104 tcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    ||||||||  || ||| |||| ||||||||| || |||||||||||||||| |||  ||||||||||||    
T  10874290 tcacttttacctaaatatatccaaacataaaccacttcacattcaactcacatttacctaaaatcaatt 10874222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 16540241 - 16540288
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccacc 211  Q
    ||||||||||||| || |||||||| ||||||||||||||||| |||||    
T  16540241 aaaatcaattcta-cataatcaattctatcaaaatcaattctccccacc 16540288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 10334109 - 10334286
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||||| || | |||||||| ||||||     | |||||| ||||||||||||||||| |||||||| ||     
T  10334109 aaaatcaattttgattcaaactatccaaacaacgtcaactcataagaattacttttagtaaagtgtatccaaacataaatcaattcatattcaactgact 10334208  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||| || ||||||||||||  |||| |||||| |||||||||||||||||  ||||||   |||||||||||||||||    
T  10334209 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgccatatcaaacacacactaaa 10334286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 50664792 - 50664905
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   |     
T  50664792 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccatac 50664891  T
Q  219 caaacacacactaa 232  Q
    ||||||||||||||    
T  50664892 caaacacacactaa 50664905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 229
Target Start/End: Original strand, 26519633 - 26519808
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| ||||||| |  || ||||||||||||  | || | |||| ||||||||||   | | |||||| ||||||||||||||||||||||||||||    
T  26519633 ttaaaatcaattttgtttcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 26519732  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    | |||||  ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | |||||||||||    
T  26519733 ctttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacacacac 26519808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 34561099 - 34561251
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    |||||||| |||| | ||||| ||||||||| || |   | |||||||| |||||||||||||||| |||||||||||| ||| || |||||||||| ||    
T  34561099 ctatccaaccaacattaatttttaagaatcaattctaagtcaatgtatccaaacataaatcaattcgcattcaactcacttttaaccaaaatcaatttta 34561198  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacaca 228  Q
     |||| | |||| |||||||||||||| ||||||| || ||| ||||||||||    
T  34561199 tcaaacttaattctatcaaaatcaattttctccactgctgaaccaaacacaca 34561251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 45423898 - 45423728
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  |||||||||||||||| |||||| |||||||||||||||   ||||| |||| ||||||||| ||||| |  ||||||||||     
T  45423898 aaaatcaattttgattcaagctatccaaacaacatgaattgataagaatcacttttactttaatatatccaaacataaaccaatt-aagttcaactcact 45423800  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacac 227  Q
    |||    ||||||||||||| || |||||||| |  ||||||||||| || ||||| ||||| |||||||||    
T  45423799 tttaggcaaaatcaattctatcagaatcaattatgccaaaatcaattttcgccaccacagaaccaaacacac 45423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 241
Target Start/End: Complemental strand, 49526773 - 49526614
Alignment:
Q  82 aaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaa 181  Q
    ||||||| | |||| |||||||||| ||||   | |||||||| ||||||||||||||| ||| |||| |||| ||| |  ||||||||||||| |||||    
T  49526773 aaacaacataaattgataagaatcaattttacatgaatgtatccaaacataaatcaatttacaatcaattcacttttaatcaaaatcaattctatcaaaa 49526674  T
Q  182 tcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaacctcttta 241  Q
    ||||||| |||||| ||||||||  | ||||||||| ||||||||| || ||| ||||||    
T  49526673 tcaatttcatcaaactcaattcttgctaccgcagaaccaaacacacccttaacttcttta 49526614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 55154536 - 55154626
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccac 210  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||  |||| |||||| ||||||||||||||||| ||||    
T  55154536 tgtatctaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccac 55154626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 38172417 - 38172263
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || | ||||||||||||| | |   | |||||| |||||||||||||||||||| | |||||| ||| || ||||||||||||     
T  38172417 ctatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcacatcccactcacttttaaccaaaatcaattctc 38172318  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
     |||| |||||| ||| ||||||||||||| |||||||  || ||||||||||||    
T  38172317 tcaaactcaattctattaaaatcaattctccccaccgccaaaccaaacacacact 38172263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 229
Target Start/End: Complemental strand, 10853397 - 10853224
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | |||||||||||||||   | | | |||| ||||||||||||||| | ||| |||||||     
T  10853397 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacataaatcaatttatattaaactcact 10853298  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    ||| || ||||||||||||  |||| |||||| ||||||||||||||||| |||||||   | |||||||||||    
T  10853297 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 10853224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 23496352 - 23496437
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||||||    
T  23496352 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctc 23496437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 52966941 - 52966764
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||| ||||||| | || | |||||||||||||||   | |  ||| | ||||||||||||||||||||  || |||    
T  52966941 ttaaaatcaattttgattcaacctatctaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaagtca 52966842  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
    | ||| || ||||||||||||  ||||||||||| |||||||||||||| |||||||| |  || |||||||||||||    
T  52966841 cttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattttctccacctccaaaccaaacacacacta 52966764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 44225600 - 44225715
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| |||||||||||| || ||||| ||||||| ||| || ||||||||||||| ||||||||||| ||| |||||||||| |||||||| || || |    
T  44225600 gtatccaaacataaatcactttacattaaactcacttttaacgaaaatcaattcta-caaaatcaattatattaaaatcaattttctccaccacacaacc 44225698  T
Q  220 aaacacacactaaacct 236  Q
    ||||||||||| |||||    
T  44225699 aaacacacactgaacct 44225715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 56 - 231
Target Start/End: Complemental strand, 30811661 - 30811487
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||  | || | ||||||||||||| |||   | |||||| |||||||| ||||||||||||||||||||     
T  30811661 aaaatcaattttgattcaaactatccaaacaatatcaagtcataagaatcacttctgttaaagtgtatccaaacataa-tcaattcacattcaactcact 30811563  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
    ||| |  ||||||||||||  |||| |||||| |||||||||||||||||  ||||||   | |||||||||||||    
T  30811562 tttaatcaaaatcaattctctcaaattcaattatatcaaaatcaattctcgtcaccgccctaccaaacacacacta 30811487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 4984615 - 4984729
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||||||||||||||||  ||||||| ||| || |||||||||| |  |||| |||||| ||||||||||||||||| |||||||   |     
T  4984615 tgtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaattatatcaaaatcaattctccccaccgccatac 4984714  T
Q  219 caaacacacactaaa 233  Q
    |||||||||||||||    
T  4984715 caaacacacactaaa 4984729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 23207135 - 23207041
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||||| ||||||||||||||||||||  ||||||  ||| || |||||||||| |||||||||||||| |||||||||||||| || |||||||    
T  23207135 tgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattataacaaaatcaattatatcaaaatcaattttcgccaccgc 23207041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 35425305 - 35425453
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||  | || | ||||||||||||| |||   | |||||| |||||||| ||||||||||||||||||||     
T  35425305 aaaatcaattttgattcaaactatccaaacaatatcaactcataagaatcacttctgttaaagtgtatccaaacataa-tcaattcacattcaactcact 35425403  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||| |  ||||||||||||  |||| |||||| |||||||||||||||||    
T  35425404 tttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctc 35425453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 229
Target Start/End: Original strand, 53074872 - 53075046
Alignment:
Q  54 ttaaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactca 153  Q
    ||||||| |||||||||  || ||||||||||||| |  | | |||||||||||||||   | | |||||| |||||||| ||||||||| |  ||||||    
T  53074872 ttaaaatcaattttgattcaaactatccaaacaacatccactcataagaatcacttttaagtgagtgtatccaaacataa-tcaattcacctcaaactca 53074970  T
Q  154 ccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    | ||| || ||||||||||||  |||| |||||| |||||||||||||| || || |||| | |||||||||||||    
T  53074971 cttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattttcaccgccgccgtatcaaacacacac 53075046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16075373 - 16075429
Alignment:
Q  1 cataatttggtaagtaatgagttaaaaaattaatataatatatctaactaagattaaa 58  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  16075373 cataatttggtaagtaat-agttaaaaaattaatataatatatctaactaaaattaaa 16075429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 229
Target Start/End: Complemental strand, 14651210 - 14651060
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    |||||||||||| ||||||  ||| |||||||| | | | | | |||| ||||| ||||||||| | ||||||||||| ||| |  |||||||||||||     
T  14651210 tatccaaacaacttgaattggtaaaaatcacttctatgtaagtatatcaaaacacaaatcaatt-atattcaactcacttttaatcaaaatcaattctat 14651112  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    ||||||||||||||| ||||||||||| |  ||||| |||| |||||||||||    
T  14651111 caaaatcaattttattaaaatcaattc-cgtcaccgtagaaccaaacacacac 14651060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 212
Target Start/End: Original strand, 20813117 - 20813272
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || | ||||||||||||||||  | | | |||| ||||| ||||||||||| || ||||||||     
T  20813117 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttgaataagtatatccaaacaaaaatcaattcaaatccaactcact 20813216  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    ||| || |||  |||||||  |||| || ||| ||||||||||||||||||||||||    
T  20813217 tttaaccaaacacaattctctcaaactc-attctatcaaaatcaattctctccaccg 20813272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 42644298 - 42644401
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||| |||||||||||| || ||||||||||||| ||| ||||||||||||| | | ||||||||||   |||||||||||||||  ||||||| || ||    
T  42644298 tatccaaacataaatcactttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaattctcatcaccgcataacca 42644397  T
Q  221 aaca 224  Q
    ||||    
T  42644398 aaca 42644401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 48189551 - 48189398
Alignment:
Q  76 ctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattcta 175  Q
    ||||||||||||| | || | ||||||||||||| |||     |||||| |||||||| |||||| ||||||||||||| ||| |  ||||||||||||     
T  48189551 ctatccaaacaacatcaactcataagaatcacttctgttaacgtgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctc 48189453  T
Q  176 acaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
     |||| |||||| |||||||||||||| || |||||||   | ||||||||||||    
T  48189452 tcaaactcaattctatcaaaatcaattatcgccaccgccctaccaaacacacact 48189398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 3348214 - 3348371
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| |||  |||||||||||| | || | |||||||| ||||||     | |||||| ||||||||||||||| |||| ||||||||     
T  3348214 aaaatcaattttgatataaaatatccaaacaacatcaactcataagaattacttttaaggaagtgtatccaaacataaatcaatttacatccaactcact 3348313  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    | | || |||||||||||    ||| |||||| ||||||||||||||||| |||||||    
T  3348314 tctaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgc 3348371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 19877453 - 19877534
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||||||||||||||||| |||| |||||||| ||| || ||||||||||||  |||| |||||| ||||||||| ||||    
T  19877453 tatctaaacataaatcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaataaatt 19877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 233
Target Start/End: Complemental strand, 44939544 - 44939369
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || |||| |||||||| | || | ||||||||||||| |   | |||||||| |||||||| |||||||| |||||||||||     
T  44939544 aaaattaattttgattaaaactattcaaacaacatcaactcataagaatcacttatag-taaatgtatccaaacataa-tcaattcatattcaactcact 44939447  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||| |  |||||||||||   |||| |||||| |||||||||||||| || |||||||   | |||||||||||||||    
T  44939446 tttaatcaaaatcaattcactcaaattcaattctatcaaaatcaattatcgccaccgctataccaaacacacactaaa 44939369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 31084241 - 31084309
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    |||||| ||||||||||||||||||||||||||||| ||| |  ||||||||||||  |||||||||||    
T  31084241 tgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctttcaaaatcaatt 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 38340841 - 38340949
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatca 220  Q
    |||| |||||||||||||||||||| |||||||| ||| || ||||||||||||  |||| |  ||| ||||||||||||||||| ||| |||   | ||    
T  38340841 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctttcaaacttcattctatcaaaatcaattctcaccaacgccatacca 38340940  T
Q  221 aacacacac 229  Q
    |||||||||    
T  38340941 aacacacac 38340949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 21023281 - 21023201
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||||||||||||||| |||| ||||||||||| ||| || |||||||||| ||   ||||||||| ||||||||||||||    
T  21023281 gtatctaaacataaatcacttcaaattcaactcacatttaaccaaaatcaatttta--caaatcaattctatcaaaatcaatt 21023201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 8424859 - 8424714
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || |||| |||||||| | || | ||||||||||||| | |   | |||||| |||||||| ||||||||| ||||||||||     
T  8424859 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattgaagtgtatccaaacataa-tcaattcacgttcaactcact 8424761  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||| || ||||||||||||  |||| |||||| ||||||| ||||||    
T  8424760 tttaaccaaaatcaattctctcaaactcaattctatcaaattcaatt 8424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 15511442 - 15511332
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| |||||||||||||||||||  |||||||| ||| || ||||||||||||  |||| ||  || |||||||||||||| || |||||||   | |    
T  15511442 gtatccaaacataaatcaattcacacccaactcacttttaaccaaaatcaattctttcaaactccgttctatcaaaatcaattatcgccaccgccatacc 15511343  T
Q  220 aaacacacact 230  Q
    |||||||||||    
T  15511342 aaacacacact 15511332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 233
Target Start/End: Complemental strand, 16246224 - 16246049
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | || |  |||||||||||| | |   | ||| || ||||||||||||||| ||||  |||||||     
T  16246224 aaaatcaattttgattcaaactatccaaacaacatcaactcctaagaatcacttctattaaagtgtttccaaacataaatcaatttacatctaactcact 16246125  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||| |||||||||||||||  |||| |||||| ||| || |||||||||| | |||||  || |||||||||| ||||    
T  16246124 tttaactaaaatcaattct--caaactcaattctattaatatcaattctcgctaccgccaaaccaaacacacagtaaa 16246049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 29716780 - 29716674
Alignment:
Q  92 aatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttat 191  Q
    |||| |||||||||||||||   | || || |||| | ||||||||||||| ||| ||||||| ||| || ||||||||||||  |||| ||||||||||    
T  29716780 aattcataagaatcacttttaattaaacgtgtctataaataaatcaattcatatttaactcacttttaaccaaaatcaattctctcaaattcaattttat 29716681  T
Q  192 caaaatc 198  Q
    |||||||    
T  29716680 caaaatc 29716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 7012675 - 7012744
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    ||||| |||||||||||| || ||||||||||||| ||| || ||||||||||||| |||||| ||||||    
T  7012675 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctaccaaaattaatttt 7012744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 35930772 - 35930865
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccg 212  Q
    |||||| || |||||||||||||| ||  ||||||| ||| |  ||||||||||||  |||| |||||| ||||||||||||||||| ||||||    
T  35930772 tgtatccaagcataaatcaattcatatcaaactcacttttaataaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccg 35930865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 10852773 - 10852710
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||||||| || ||||||||||||| ||| || |||||||||| || |||||||||||||    
T  10852773 aaacataaatcactttacattcaactcacttttaaccaaaatcaattataccaaaatcaatttt 10852710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 25181245 - 25181351
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatc 219  Q
    ||||| |||||||||| | || ||||| ||||||| ||| |  ||||||||||||| |||||||||||  ||||| |||||||||  |||||||| || |    
T  25181245 gtatccaaacataaataattttacattaaactcacttttaatcaaaatcaattcta-caaaatcaattcaatcaatatcaattctagccaccgcataacc 25181343  T
Q  220 aaacacac 227  Q
    ||||||||    
T  25181344 aaacacac 25181351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 231
Target Start/End: Original strand, 42475701 - 42475855
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    ||||||||||||   |||| ||||||||| |||||  |  | |||||  ||||| ||||||||||||||  ||||||| ||| |  ||||||||||||      
T  42475701 tatccaaacaacaacaattcataagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctct 42475800  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacacta 231  Q
    |||| |||||| ||| |||||||||||||  ||||||  || ||||| |||||||    
T  42475801 caaactcaattctataaaaatcaattctcgtcaccgccaaaccaaacgcacacta 42475855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 30810069 - 30809944
Alignment:
Q  62 aattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttac 161  Q
    |||||||||  || ||||||||||| | | ||||||||||||||||||||   | |  |||   || |||||||||||||||||| ||||||| ||| ||    
T  30810069 aattttgattcaaactatccaaacatcatcaatttataagaatcacttttaagtaagcgtaatcaatcataaatcaattcacatttaactcacttttaac 30809970  T
Q  162 taaaatcaattctaacaaaatcaatt 187  Q
     ||| |||||| || |||||||||||    
T  30809969 caaactcaattttatcaaaatcaatt 30809944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 23918858 - 23918946
Alignment:
Q  102 aatcacttttgtcttaatg-tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatttt 189  Q
    |||||||||||| |||| | || | |||||||||||| || ||||||||||||| ||| || ||||| ||||||| |||||| ||||||    
T  23918858 aatcacttttgttttaaaggtaaccaaacataaatcactttacattcaactcacttttaaccaaaattaattctaccaaaattaatttt 23918946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 40415361 - 40415277
Alignment:
Q  121 tatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    |||| |||||||||| |||| |||| |||||||| ||| ||||||||| ||||    ||| |||||| |||||||||||||||||    
T  40415361 tatccaaacataaattaatttacatccaactcacttttaactaaaatcgattcctttaaactcaattctatcaaaatcaattctc 40415277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 38125508 - 38125398
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| |||||||| ||||||||| |  ||| ||| ||| || ||||||||||||  |||| |||||| |||||||||||||||||  ||||||   |     
T  38125508 tgtatccaaacataa-tcaattcacctcaaacccacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcgtcaccgccatac 38125410  T
Q  219 caaacacacact 230  Q
    ||||||||||||    
T  38125409 caaacacacact 38125398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 42318364 - 42318446
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||| |||||||| ||||||||| |  ||||||| ||| || ||||||||||||  |||| |||||| ||||||||||||||    
T  42318364 tgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 42318446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 8802116 - 8802177
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacac 225  Q
    ||||||||||||| || |||||||||||| |||||||||||| || |||| | ||||||||||    
T  8802116 aaaatcaattcta-cacaatcaattttattaaaatcaattctttctaccgaacaatcaaacac 8802177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 21225024 - 21225138
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaat 218  Q
    |||||| ||||||| ||||||| ||||  ||||||| ||| || ||||||||||||  |||| |||||| |||  | |||||||||| || ||||  ||     
T  21225024 tgtatccaaacatatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatagagatcaattctcgccgccgctaaac 21225123  T
Q  219 caaacacacactaaa 233  Q
    |||||||||| ||||    
T  21225124 caaacacacattaaa 21225138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 23526342 - 23526249
Alignment:
Q  130 ataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaaca 224  Q
    |||||||| || || |||||||||||||| | || |||||||| || |||||| | || |||||||||||||||| || ||| || |||||||||    
T  23526342 ataaatcattttacgttcaactcacctttaattagaatcaattata-caaaataagttctatcaaaatcaattctttctaccacacaatcaaaca 23526249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 35058180 - 35058233
Alignment:
Q  160 actaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgca 214  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||  |||||||    
T  35058180 actaaaatcaattcta-caaaatcaattctatcaaaattaattctccacaccgca 35058233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 21261261 - 21261221
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattct 204  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  21261261 aaaatcaattcta-cataatcaattttatcaaaatcaattct 21261221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 30736172 - 30736213
Alignment:
Q  133 aatcaattcacattcaactcaccttttactaaaatcaattct 174  Q
    ||||||||||||| |||||||| ||| |||||||||||||||    
T  30736172 aatcaattcacatacaactcacttttaactaaaatcaattct 30736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 32861828 - 32861885
Alignment:
Q  82 aaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaat 139  Q
    ||||||| | |||| ||||||||| ||||| | |||||||||| ||||||||||||||    
T  32861828 aaacaacataaattgataagaatctcttttatgttaatgtatccaaacataaatcaat 32861885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 44224754 - 44224907
Alignment:
Q  77 tatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaa 176  Q
    |||||||||||| | || | |||||||||||||||   | | |||||| ||||||||||||||||| ||  ||||||| ||| || | |||||||| |      
T  44224754 tatccaaacaacatcaactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcatatcaaactcacttttaaccataatcaattatct 44224853  T
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacact 230  Q
    |||| |||||| || |  ||||||||||| || ||||  || |||||| |||||    
T  44224854 caaactcaattctaccggaatcaattctccccgccgccaaaccaaacaaacact 44224907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 52813293 - 52813362
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    |||||||||||   |||| |||||| |||||||||||||| |   |||||||||| ||||||||||||||    
T  52813293 aaaatcaattcactcaaactcaattctatcaaaatcaattttactcaccgcagaaccaaacacacactaa 52813362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 52931639 - 52931586
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    |||||| ||||||||||||||| ||| | ||||||| ||| |||||||||||||    
T  52931639 tgtatccaaacataaatcaatttacactaaactcacttttaactaaaatcaatt 52931586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 25848067 - 25848119
Alignment:
Q  120 gtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaatt 172  Q
    ||||| ||||||||||||||||| ||| ||||||| |||||| ||||| ||||    
T  25848067 gtatccaaacataaatcaattcatattaaactcactttttaccaaaattaatt 25848119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 53179882 - 53179958
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaa 195  Q
    |||||| ||||||||||||||| ||||  ||||||| ||| || |||||||||| ||  ||| |||||| |||||||    
T  53179882 tgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatataaaactcaattctatcaaa 53179958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 54963154 - 54963210
Alignment:
Q  177 caaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||||||||||| ||||| |||||||||| ||||  || ||| |||||||||||||||    
T  54963154 caaaatcaattctatcagaatcaattctatccaaagctgaaccaaacacacactaaa 54963210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 231
Target Start/End: Complemental strand, 15346 - 15213
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaa 196  Q
    |||| |||||||| ||| || | ||||| |||||||||||| || | ||||||||||| ||| || |||||||||| | |||||||||||| ||||||||    
T  15346 ataaaaatcacttatgttttgaagtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaa 15248  T
Q  197 tcaattctctccaccgcagaatcaaacacacacta 231  Q
    |||||| ||  ||||||| || |||||||||||||    
T  15247 tcaattttcgtcaccgcacaaccaaacacacacta 15213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 46734 - 46906
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||| | | ||||||||||||| |||||| |||| ||||||||||   ||||| |||| ||||||||| ||||| |  ||||||||||     
T  46734 aaaatcaattttgatttgaactatccaaacaacatgaattgataaaaatcacttttactttaatatatccaaacataaaccaatt-aagttcaactcact 46832  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacac 229  Q
    |||    ||||||||||||| ||||||||||| | |||||||||||| || |||| | | || |||||||||||    
T  46833 tttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaattttcgccactggaaaaccaaacacacac 46906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 29252 - 29107
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| |||||||||  || ||||||||||||| | |||| |||||||| |||| | |   | |||||| |||||||| ||||||||||||||||||||     
T  29252 aaaatcaattttgattcaaactatccaaacaacatcaattcataagaataacttctattaaagtgtatccaaacataa-tcaattcacattcaactcact 29154  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    ||| || ||||||||||||  |||| | |||| ||||||||||||||    
T  29153 tttaaccaaaatcaattctttcaaacttaattctatcaaaatcaatt 29107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 5882 - 5811
Alignment:
Q  134 atcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctc 205  Q
    ||||||||||||||||||||| ||| || ||||||||||||  |||| |||||| |||||||||||||||||    
T  5882 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattctc 5811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 8483 - 8566
Alignment:
Q  119 tgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 202  Q
    |||||| ||||||||||||||||||||  ||||||| ||| || |||||||||| || |||| |||||| ||||||||||||||    
T  8483 tgtatccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaatt 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 118504 - 118393
Alignment:
Q  92 aatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttat 191  Q
    |||| |||||||||||||||||   | |||||| ||||||||||||||| ||||  ||||||| ||| || |||||| |||||| |||| ||||||  ||    
T  118504 aattcataagaatcacttttgtacaagtgtatccaaacataaatcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaattcgat 118405  T
Q  192 caaaatcaattc 203  Q
    ||||||||||||    
T  118404 caaaatcaattc 118393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 138597 - 138507
Alignment:
Q  97 ataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaatt 187  Q
    ||||||||||||||| | |||| ||||| ||||||||||||||| |  |||| ||||| ||| |||||||| ||||| |  ||||||||||    
T  138597 ataagaatcacttttatgttaaggtatccaaacataaatcaatttatgttcagctcacttttaactaaaattaattcaactaaaatcaatt 138507  T

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Target: scaffold0217 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 233
Target Start/End: Complemental strand, 2157 - 1980
Alignment:
Q  56 aaaataaattttgatctaagctatccaaacaacgtgaatttataagaatcacttttgtcttaatgtatctaaacataaatcaattcacattcaactcacc 155  Q
    ||||| ||||||||  ||| ||||||||||||| | ||   || | |||||||||| | | | || ||| ||||||||||||||||| ||  ||||||      
T  2157 aaaatcaattttgacttaaactatccaaacaacatcaagccatgataatcacttttatatgagtgcatccaaacataaatcaattcatatcaaactcatt 2058  T
Q  156 ttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaaa 233  Q
    ||  || ||||||||||||  |||| |||||| |||||||||||||| ||  ||||||  |  |||||||||||||||    
T  2057 ttgaaccaaaatcaattctttcaaactcaattctatcaaaatcaattatcgacaccgccaatccaaacacacactaaa 1980  T

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Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 32058 - 32103
Alignment:
Q  165 aatcaattctaacaaaatcaattttatcaaaatcaattctctccac 210  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  32058 aatcaattctatcaaaatcaattctatcaaaatcaattctccccac 32103  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 7355 - 7426
Alignment:
Q  160 actaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgcagaatcaaacacacactaa 232  Q
    |||||||||||||||  |||||||||||| ||||||||||||| |  | |||||| || ||||||||||||||    
T  7355 actaaaatcaattctg-caaaatcaatttaatcaaaatcaattatgacaaccgcaaaaccaaacacacactaa 7426  T

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Target: scaffold0983 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 2328 - 2241
Alignment:
Q  126 aaacataaatcaattcacattcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    |||||||||||||||||| |  ||||||| ||| || |||||||||| |  |||| |||||| | |||||||||||| || |||||||    
T  2328 aaacataaatcaattcacctcaaactcacttttaaccaaaatcaattatgtcaaactcaattctgtcaaaatcaattttcgccaccgc 2241  T

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Target: scaffold0381 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 9188 - 9238
Alignment:
Q  163 aaaatcaattctaacaaaatcaattttatcaaaatcaattctctccaccgc 213  Q
    ||||||||||||  |||| |||||| ||||||||||||||||| |||||||    
T  9188 aaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgc 9238  T

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