View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3237_high_21 (Length: 511)

Name: NF3237_high_21
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3237_high_21
NF3237_high_21
[»] chr5 (46 HSPs)
chr5 (9-496)||(32387310-32387797)
chr5 (300-481)||(6647709-6647891)
chr5 (300-495)||(41554623-41554819)
chr5 (291-495)||(18472508-18472713)
chr5 (287-495)||(20270837-20271046)
chr5 (300-495)||(40774896-40775093)
chr5 (300-495)||(4070687-4070882)
chr5 (293-495)||(28618731-28618934)
chr5 (287-495)||(8811934-8812142)
chr5 (287-495)||(29310136-29310345)
chr5 (300-495)||(33486351-33486547)
chr5 (302-495)||(15710680-15710876)
chr5 (287-404)||(22397421-22397539)
chr5 (287-495)||(9034724-9034933)
chr5 (300-492)||(28500825-28501018)
chr5 (287-495)||(31645952-31646161)
chr5 (285-434)||(4726771-4726921)
chr5 (287-495)||(6886960-6887169)
chr5 (292-495)||(40564939-40565141)
chr5 (291-404)||(19645914-19646028)
chr5 (287-404)||(20146092-20146207)
chr5 (314-494)||(34844066-34844247)
chr5 (287-434)||(2415523-2415671)
chr5 (300-495)||(35906405-35906601)
chr5 (287-496)||(28388889-28389100)
chr5 (35-199)||(32393476-32393637)
chr5 (300-481)||(41358175-41358347)
chr5 (288-495)||(5378426-5378634)
chr5 (303-434)||(34874000-34874132)
chr5 (287-496)||(8957329-8957539)
chr5 (287-404)||(32390520-32390638)
chr5 (287-480)||(41063193-41063387)
chr5 (292-463)||(6074550-6074722)
chr5 (300-492)||(34866563-34866760)
chr5 (287-495)||(10923916-10924124)
chr5 (316-495)||(14910458-14910638)
chr5 (300-495)||(29154356-29154552)
chr5 (337-495)||(17325444-17325603)
chr5 (358-495)||(12524446-12524583)
chr5 (287-399)||(41988275-41988388)
chr5 (287-351)||(37425147-37425211)
chr5 (414-496)||(7151062-7151144)
chr5 (414-495)||(25962170-25962251)
chr5 (414-495)||(29098046-29098127)
chr5 (300-399)||(34893822-34893922)
chr5 (440-496)||(39591325-39591381)
[»] chr4 (61 HSPs)
chr4 (287-495)||(23067630-23067839)
chr4 (305-495)||(46775640-46775830)
chr4 (287-495)||(46716676-46716885)
chr4 (300-494)||(46728703-46728898)
chr4 (287-495)||(4634406-4634615)
chr4 (293-495)||(30469905-30470108)
chr4 (287-492)||(42972161-42972367)
chr4 (287-495)||(14346554-14346763)
chr4 (300-495)||(29474110-29474306)
chr4 (287-476)||(16991995-16992185)
chr4 (287-495)||(43156899-43157109)
chr4 (287-495)||(28990421-28990630)
chr4 (287-481)||(26576299-26576493)
chr4 (301-494)||(29576904-29577099)
chr4 (287-496)||(37869198-37869408)
chr4 (287-495)||(9474321-9474530)
chr4 (287-495)||(14542294-14542503)
chr4 (287-495)||(38434722-38434930)
chr4 (300-491)||(15729767-15729959)
chr4 (287-495)||(9661976-9662185)
chr4 (287-495)||(29589143-29589352)
chr4 (287-495)||(32189103-32189311)
chr4 (300-495)||(51646230-51646429)
chr4 (300-495)||(54420522-54420719)
chr4 (300-494)||(53903717-53903910)
chr4 (287-485)||(2945260-2945459)
chr4 (285-403)||(3169547-3169666)
chr4 (305-495)||(4959356-4959546)
chr4 (285-494)||(1125062-1125272)
chr4 (287-495)||(31601138-31601349)
chr4 (304-495)||(52555522-52555714)
chr4 (330-472)||(1657371-1657514)
chr4 (285-491)||(41486696-41486903)
chr4 (338-495)||(20961622-20961780)
chr4 (300-432)||(7242614-7242747)
chr4 (287-434)||(12519779-12519927)
chr4 (340-495)||(34115438-34115594)
chr4 (302-403)||(1645429-1645531)
chr4 (300-385)||(40859810-40859896)
chr4 (292-495)||(33020709-33020911)
chr4 (291-404)||(6789749-6789863)
chr4 (287-404)||(30416466-30416584)
chr4 (294-495)||(4622485-4622693)
chr4 (287-495)||(35658313-35658521)
chr4 (305-457)||(46386594-46386747)
chr4 (343-495)||(31311647-31311802)
chr4 (292-477)||(38169960-38170145)
chr4 (318-495)||(9549594-9549771)
chr4 (305-435)||(9781649-9781780)
chr4 (362-494)||(11817255-11817387)
chr4 (300-495)||(6408579-6408777)
chr4 (287-491)||(23926164-23926369)
chr4 (358-434)||(44021424-44021500)
chr4 (300-434)||(5388651-5388786)
chr4 (441-495)||(23963952-23964006)
chr4 (380-473)||(22621648-22621741)
chr4 (386-495)||(44375057-44375166)
chr4 (448-494)||(7242569-7242615)
chr4 (303-403)||(35338533-35338630)
chr4 (414-495)||(6082213-6082294)
chr4 (451-496)||(24398609-24398654)
[»] chr2 (64 HSPs)
chr2 (287-495)||(7640138-7640347)
chr2 (287-494)||(26491425-26491632)
chr2 (287-495)||(43929082-43929291)
chr2 (300-495)||(19580784-19580980)
chr2 (300-495)||(44167493-44167689)
chr2 (302-495)||(36508067-36508261)
chr2 (287-481)||(7443362-7443557)
chr2 (287-496)||(9715325-9715535)
chr2 (300-495)||(25622826-25623023)
chr2 (300-495)||(25516628-25516824)
chr2 (300-495)||(43567009-43567205)
chr2 (285-495)||(5930544-5930755)
chr2 (287-495)||(10589218-10589427)
chr2 (287-495)||(37883776-37883985)
chr2 (287-495)||(17118596-17118804)
chr2 (288-495)||(27023921-27024129)
chr2 (300-495)||(41176994-41177190)
chr2 (285-495)||(28228343-28228554)
chr2 (300-496)||(38822208-38822405)
chr2 (300-495)||(3465065-3465261)
chr2 (300-495)||(15673750-15673946)
chr2 (287-495)||(17068698-17068906)
chr2 (287-480)||(5071167-5071361)
chr2 (285-481)||(4878532-4878729)
chr2 (287-495)||(13268695-13268904)
chr2 (302-495)||(17056251-17056444)
chr2 (287-495)||(25771568-25771777)
chr2 (287-403)||(44951542-44951659)
chr2 (300-403)||(24500623-24500727)
chr2 (293-495)||(6090019-6090221)
chr2 (287-456)||(11550416-11550587)
chr2 (300-434)||(27191180-27191315)
chr2 (300-434)||(27840994-27841129)
chr2 (293-406)||(19953699-19953812)
chr2 (314-495)||(20036532-20036714)
chr2 (291-495)||(16720630-16720835)
chr2 (371-495)||(3603193-3603317)
chr2 (292-495)||(2251129-2251331)
chr2 (300-491)||(17074699-17074890)
chr2 (300-446)||(29812446-29812593)
chr2 (372-494)||(34480173-34480296)
chr2 (338-495)||(3390597-3390755)
chr2 (287-404)||(29734313-29734431)
chr2 (287-391)||(16879851-16879956)
chr2 (287-391)||(16991984-16992089)
chr2 (287-495)||(17095268-17095476)
chr2 (337-495)||(3397761-3397920)
chr2 (337-467)||(42105576-42105706)
chr2 (287-372)||(40125512-40125598)
chr2 (391-495)||(18141263-18141367)
chr2 (411-493)||(44441627-44441709)
chr2 (341-496)||(25237112-25237268)
chr2 (448-495)||(11931157-11931204)
chr2 (337-495)||(35353813-35353972)
chr2 (340-404)||(31125252-31125317)
chr2 (345-404)||(802961-803021)
chr2 (302-406)||(17084323-17084427)
chr2 (414-473)||(4732327-4732386)
chr2 (416-495)||(12366121-12366200)
chr2 (380-495)||(15920091-15920206)
chr2 (287-334)||(41842071-41842118)
chr2 (417-471)||(9689792-9689846)
chr2 (300-405)||(38105359-38105465)
chr2 (380-465)||(34471183-34471268)
[»] chr1 (56 HSPs)
chr1 (288-495)||(21326597-21326805)
chr1 (300-495)||(8893429-8893624)
chr1 (305-496)||(44513783-44513975)
chr1 (287-479)||(5832357-5832550)
chr1 (287-495)||(36621475-36621683)
chr1 (287-495)||(44562531-44562740)
chr1 (287-472)||(22344717-22344903)
chr1 (303-494)||(11121115-11121307)
chr1 (319-496)||(13969421-13969599)
chr1 (287-495)||(12967515-12967723)
chr1 (287-495)||(27469490-27469699)
chr1 (287-495)||(33703292-33703501)
chr1 (300-495)||(6212696-6212892)
chr1 (316-495)||(12147830-12148010)
chr1 (287-485)||(630576-630775)
chr1 (287-493)||(47392261-47392466)
chr1 (338-495)||(15276228-15276386)
chr1 (300-495)||(26199716-26199912)
chr1 (285-495)||(22031884-22032084)
chr1 (287-495)||(29067172-29067379)
chr1 (301-495)||(33177380-33177574)
chr1 (300-481)||(4564652-4564834)
chr1 (291-404)||(28213175-28213289)
chr1 (287-495)||(38646707-38646916)
chr1 (303-495)||(52839669-52839862)
chr1 (302-495)||(10877484-10877679)
chr1 (287-401)||(23320563-23320678)
chr1 (300-494)||(45659150-45659345)
chr1 (287-495)||(2350745-2350954)
chr1 (300-431)||(14717116-14717248)
chr1 (300-496)||(46589283-46589481)
chr1 (385-494)||(40992520-40992629)
chr1 (287-425)||(10264832-10264971)
chr1 (287-481)||(23257211-23257406)
chr1 (380-495)||(26771323-26771438)
chr1 (345-495)||(34659423-34659574)
chr1 (287-481)||(32538984-32539181)
chr1 (287-495)||(48654823-48655032)
chr1 (288-495)||(38644579-38644787)
chr1 (337-495)||(13691545-13691704)
chr1 (292-404)||(34566816-34566927)
chr1 (300-433)||(37684934-37685068)
chr1 (300-433)||(37700449-37700583)
chr1 (435-495)||(171292-171352)
chr1 (380-495)||(12871838-12871953)
chr1 (293-426)||(15698328-15698461)
chr1 (287-404)||(37662333-37662451)
chr1 (380-473)||(47551312-47551405)
chr1 (291-389)||(41018714-41018813)
chr1 (414-495)||(18343869-18343950)
chr1 (316-434)||(900245-900364)
chr1 (380-495)||(28399118-28399233)
chr1 (375-434)||(29938449-29938508)
chr1 (380-495)||(32878925-32879040)
chr1 (380-494)||(9298206-9298320)
chr1 (287-323)||(30853744-30853780)
[»] chr3 (52 HSPs)
chr3 (300-495)||(40797169-40797365)
chr3 (300-495)||(913098-913294)
chr3 (300-495)||(22844188-22844384)
chr3 (285-479)||(32237794-32237989)
chr3 (300-495)||(22286533-22286729)
chr3 (300-494)||(32089714-32089908)
chr3 (300-495)||(4019731-4019930)
chr3 (300-495)||(3088446-3088642)
chr3 (316-495)||(21586051-21586231)
chr3 (300-495)||(28995091-28995287)
chr3 (300-495)||(39340335-39340531)
chr3 (300-495)||(50519919-50520115)
chr3 (291-493)||(29776474-29776677)
chr3 (303-496)||(53426937-53427131)
chr3 (287-495)||(43029806-43030015)
chr3 (292-495)||(34767114-34767318)
chr3 (315-496)||(50460341-50460523)
chr3 (305-485)||(45664362-45664543)
chr3 (305-495)||(27831240-27831431)
chr3 (285-495)||(40461777-40461988)
chr3 (287-495)||(1165178-1165387)
chr3 (288-494)||(20200841-20201048)
chr3 (337-495)||(33076458-33076617)
chr3 (288-494)||(20203023-20203230)
chr3 (295-480)||(11846680-11846865)
chr3 (340-473)||(21803708-21803841)
chr3 (309-404)||(42106283-42106379)
chr3 (287-494)||(54240209-54240417)
chr3 (337-495)||(37051767-37051926)
chr3 (300-426)||(41882261-41882388)
chr3 (287-404)||(25939352-25939470)
chr3 (361-458)||(25373901-25373998)
chr3 (300-496)||(33977706-33977903)
chr3 (287-465)||(22893526-22893706)
chr3 (358-495)||(43839299-43839436)
chr3 (293-495)||(47914375-47914579)
chr3 (359-434)||(20251853-20251928)
chr3 (337-403)||(48060963-48061030)
chr3 (287-403)||(29182484-29182599)
chr3 (291-495)||(35501541-35501746)
chr3 (292-406)||(43242936-43243051)
chr3 (414-495)||(40883657-40883738)
chr3 (414-495)||(49627886-49627967)
chr3 (394-465)||(19861100-19861171)
chr3 (315-401)||(36540550-36540637)
chr3 (288-334)||(25374014-25374060)
chr3 (414-463)||(1074717-1074766)
chr3 (448-481)||(25939292-25939325)
chr3 (414-495)||(32080545-32080626)
chr3 (414-495)||(48652231-48652312)
chr3 (394-495)||(55455108-55455209)
chr3 (287-323)||(40365349-40365385)
[»] chr7 (61 HSPs)
chr7 (285-495)||(26017440-26017651)
chr7 (287-495)||(30992605-30992814)
chr7 (287-495)||(23732175-23732384)
chr7 (287-495)||(40775390-40775599)
chr7 (287-494)||(14707706-14707913)
chr7 (285-494)||(43806933-43807143)
chr7 (300-495)||(28015493-28015689)
chr7 (287-493)||(44681583-44681790)
chr7 (287-494)||(772566-772774)
chr7 (300-495)||(8611406-8611602)
chr7 (300-495)||(37399734-37399930)
chr7 (287-495)||(7986015-7986224)
chr7 (288-495)||(46918524-46918731)
chr7 (300-495)||(49167061-49167257)
chr7 (287-496)||(134926-135136)
chr7 (287-495)||(8319438-8319647)
chr7 (292-495)||(21329080-21329282)
chr7 (300-496)||(40476843-40477040)
chr7 (287-495)||(42490826-42491035)
chr7 (287-495)||(47749857-47750066)
chr7 (300-491)||(5024842-5025034)
chr7 (300-495)||(11001979-11002175)
chr7 (292-495)||(29804461-29804661)
chr7 (300-404)||(24470529-24470634)
chr7 (300-404)||(24475477-24475582)
chr7 (303-495)||(39090227-39090420)
chr7 (384-495)||(22379491-22379602)
chr7 (287-404)||(10250356-10250474)
chr7 (301-495)||(41748309-41748504)
chr7 (287-434)||(9933970-9934114)
chr7 (380-470)||(39707501-39707591)
chr7 (358-496)||(47156580-47156718)
chr7 (300-495)||(36350304-36350499)
chr7 (291-397)||(24045160-24045267)
chr7 (330-480)||(33530272-33530423)
chr7 (345-495)||(43483769-43483920)
chr7 (287-357)||(13008594-13008664)
chr7 (287-391)||(22751561-22751666)
chr7 (287-403)||(35135058-35135174)
chr7 (292-492)||(38649143-38649343)
chr7 (358-495)||(45949461-45949598)
chr7 (369-481)||(16273588-16273700)
chr7 (315-434)||(19895527-19895647)
chr7 (413-492)||(32944128-32944207)
chr7 (418-496)||(22751657-22751735)
chr7 (300-350)||(23177511-23177561)
chr7 (287-404)||(34594395-34594513)
chr7 (368-481)||(35362903-35363016)
chr7 (393-494)||(40657840-40657945)
chr7 (287-404)||(25855093-25855211)
chr7 (358-495)||(2532136-2532273)
chr7 (312-400)||(37890366-37890455)
chr7 (448-496)||(35134982-35135030)
chr7 (414-472)||(45482321-45482379)
chr7 (414-471)||(9137207-9137264)
chr7 (287-399)||(32312690-32312803)
chr7 (414-495)||(37375829-37375910)
chr7 (414-495)||(44482656-44482737)
chr7 (368-400)||(9934122-9934154)
chr7 (287-327)||(14734000-14734040)
chr7 (413-465)||(32643224-32643276)
[»] scaffold0722 (1 HSPs)
scaffold0722 (287-495)||(5308-5517)
[»] chr8 (63 HSPs)
chr8 (287-495)||(41996668-41996875)
chr8 (287-495)||(5457194-5457403)
chr8 (287-495)||(8054590-8054798)
chr8 (304-496)||(12243997-12244190)
chr8 (300-496)||(3925471-3925668)
chr8 (285-496)||(32256502-32256714)
chr8 (287-494)||(44295439-44295647)
chr8 (287-495)||(32104619-32104829)
chr8 (317-495)||(37719993-37720172)
chr8 (292-495)||(16937121-16937325)
chr8 (300-495)||(37129457-37129653)
chr8 (302-495)||(10042910-10043103)
chr8 (300-496)||(12248492-12248692)
chr8 (293-458)||(15665668-15665834)
chr8 (287-403)||(26937648-26937765)
chr8 (314-490)||(13977558-13977735)
chr8 (300-495)||(16996671-16996867)
chr8 (292-495)||(18196928-18197132)
chr8 (292-495)||(32061922-32062126)
chr8 (285-481)||(15237441-15237631)
chr8 (287-404)||(32412913-32413031)
chr8 (287-495)||(7269248-7269455)
chr8 (285-481)||(31712872-31713069)
chr8 (300-495)||(5917531-5917720)
chr8 (300-405)||(37659102-37659208)
chr8 (381-496)||(16809081-16809196)
chr8 (305-494)||(5328095-5328280)
chr8 (288-495)||(7280911-7281117)
chr8 (287-394)||(9270144-9270252)
chr8 (287-434)||(11298603-11298751)
chr8 (287-434)||(14115671-14115819)
chr8 (303-494)||(2629051-2629241)
chr8 (303-404)||(13864498-13864600)
chr8 (287-495)||(36545563-36545772)
chr8 (287-495)||(9992790-9992998)
chr8 (300-404)||(23766875-23766981)
chr8 (382-495)||(31147609-31147723)
chr8 (287-403)||(5989753-5989870)
chr8 (359-496)||(7014248-7014385)
chr8 (287-404)||(1215214-1215330)
chr8 (448-495)||(5989898-5989945)
chr8 (287-389)||(14327602-14327705)
chr8 (287-388)||(31874207-31874309)
chr8 (292-402)||(27534287-27534398)
chr8 (292-404)||(18190719-18190830)
chr8 (371-492)||(32920852-32920973)
chr8 (448-496)||(3028301-3028349)
chr8 (380-434)||(3681129-3681183)
chr8 (287-404)||(17019241-17019359)
chr8 (287-404)||(17549678-17549796)
chr8 (413-495)||(31874331-31874412)
chr8 (371-432)||(283833-283894)
chr8 (291-340)||(284416-284465)
chr8 (291-340)||(631412-631461)
chr8 (371-432)||(631983-632044)
chr8 (291-340)||(817224-817273)
chr8 (371-432)||(817795-817856)
chr8 (450-495)||(9799793-9799838)
chr8 (414-495)||(10148202-10148283)
chr8 (414-463)||(38545977-38546026)
chr8 (285-357)||(3028174-3028246)
chr8 (382-434)||(10334395-10334447)
chr8 (285-434)||(26582735-26582881)
[»] chr6 (37 HSPs)
chr6 (287-495)||(23843206-23843415)
chr6 (300-495)||(12576263-12576459)
chr6 (285-495)||(32804416-32804627)
chr6 (287-495)||(13233890-13234099)
chr6 (287-495)||(19759911-19760120)
chr6 (299-495)||(7049380-7049577)
chr6 (303-495)||(20496332-20496525)
chr6 (288-495)||(20845132-20845340)
chr6 (300-495)||(10744719-10744914)
chr6 (300-495)||(11426077-11426277)
chr6 (301-494)||(904405-904599)
chr6 (285-494)||(5544828-5545038)
chr6 (300-404)||(8644381-8644486)
chr6 (300-496)||(15127911-15128107)
chr6 (287-434)||(1944219-1944367)
chr6 (285-434)||(548709-548859)
chr6 (369-495)||(5417006-5417132)
chr6 (293-495)||(16913456-16913657)
chr6 (361-470)||(892482-892591)
chr6 (358-487)||(8632986-8633115)
chr6 (300-404)||(31804356-31804461)
chr6 (288-495)||(31748081-31748289)
chr6 (292-404)||(33541404-33541515)
chr6 (414-495)||(12651983-12652064)
chr6 (285-404)||(8694150-8694270)
chr6 (292-411)||(22530408-22530527)
chr6 (394-465)||(2304651-2304722)
chr6 (453-495)||(8644518-8644560)
chr6 (292-404)||(34020733-34020844)
chr6 (414-495)||(12481153-12481234)
chr6 (414-495)||(12654092-12654173)
chr6 (414-495)||(30813323-30813404)
chr6 (380-489)||(33194811-33194920)
chr6 (287-394)||(32457769-32457876)
chr6 (287-334)||(5417142-5417189)
chr6 (414-463)||(1106682-1106731)
chr6 (288-352)||(891712-891776)
[»] scaffold0316 (1 HSPs)
scaffold0316 (287-495)||(11985-12194)
[»] scaffold0011 (1 HSPs)
scaffold0011 (287-495)||(11137-11344)
[»] scaffold0012 (1 HSPs)
scaffold0012 (288-404)||(244760-244877)
[»] scaffold1294 (1 HSPs)
scaffold1294 (292-495)||(908-1107)
[»] scaffold0157 (1 HSPs)
scaffold0157 (287-434)||(984-1132)
[»] scaffold0665 (1 HSPs)
scaffold0665 (287-434)||(970-1118)
[»] scaffold0045 (1 HSPs)
scaffold0045 (368-495)||(9440-9567)
[»] scaffold0023 (1 HSPs)
scaffold0023 (300-490)||(91191-91381)
[»] scaffold0024 (1 HSPs)
scaffold0024 (338-495)||(36698-36856)
[»] scaffold0340 (1 HSPs)
scaffold0340 (337-476)||(11577-11717)
[»] scaffold0018 (2 HSPs)
scaffold0018 (358-495)||(136856-136993)
scaffold0018 (287-335)||(137001-137049)
[»] scaffold0999 (1 HSPs)
scaffold0999 (380-495)||(1921-2036)
[»] scaffold0321 (1 HSPs)
scaffold0321 (380-434)||(6974-7028)
[»] scaffold0150 (1 HSPs)
scaffold0150 (287-404)||(10184-10302)


Alignment Details
Target: chr5 (Bit Score: 456; Significance: 0; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 9 - 496
Target Start/End: Original strand, 32387310 - 32387797
Alignment:
Q  9 agcataggcagtattgctaaccatggaaaaaactgttctaagatctccaacatagactctataaccaagaaaatcttagagatcaagcctatacataaca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32387310 agcataggcagtattgctaaccatggaaaaaactgttctaagatctccaacatagactctataaccaagaaaatcttagagatcaagcctatacataaca 32387409  T
Q  109 acatggaaaaccaatcaaaacaccaaacaatataacctgaaattttttgtcgattatatttctcaaacaccggttatcattgatactttaagtaaacccc 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32387410 acatggaaaaccaatcaaaacaccaaacaatataacctgaaattttttgtggattatatttctcaaacaccggttatcattgatactttaagtaaacccc 32387509  T
Q  209 aaagtatatacactcttatcaaattcaattccgagacgtatatatatacaatgcactcaatctgttaacaagaggtatgttggtttgtttatcgtctttg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32387510 aaagtatatacactcttatcaaattcaattccgagacgtatatatatacaatgcactcaatctgttaacaagaggtatgttgatttgtttatcgtctttg 32387609  T
Q  309 tgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacat 408  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32387610 tgcggcgttgtttgcctttcttgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgattttgacat 32387709  T
Q  409 ttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
      |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32387710 cgttcacgttgcagatccggagacataggtgttccagatacttgaatatagtcatatgtgtaggcttttgtaccttgtcgttttatgt 32387797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 300 - 481
Target Start/End: Complemental strand, 6647891 - 6647709
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||  |||||| |||| |||||||||||||||||||    
T  6647891 tcgtctttgtgcggcgttgtttgtctttcttgttttattcagctatttgttcggttcagattgtcaggtcagcttagatcaagtgcagatccaatcaatg 6647792  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    |||| | | |  |  ||||||||||||||||||||| | | |||| || |||| |||||| ||||||||||||||||||||||    
T  6647791 acttcggcgtcatcaacgttgcagatccggagacatggatattccggagactttaatatagtcatatgtgtaggcttttgtac 6647709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 41554623 - 41554819
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||| ||||||| ||||||||||||||| |||||   ||||||||||||||| |||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  41554623 tcgtccttgtgcgacgttgtttgtctttcttgtttcgctcaggtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatg 41554722  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||  ||  |  ||||||||||||||||||||| ||| |||| || |||| |||||| ||||||||||||||||| |||| ||| |||||||||    
T  41554723 actttggaatcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 41554819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 291 - 495
Target Start/End: Complemental strand, 18472713 - 18472508
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatc 389  Q
    |||||||  ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || |||||||| ||||||||||    
T  18472713 gtttgttcctcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagattgtcagatcaacttcgatccagtgcagatc 18472614  T
Q  390 caatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgt 489  Q
     ||||||||||||||   |  |  |||||| ||||| ||||||||  || |||| || ||||  ||||| ||||||||||||||||| |||| |||| ||    
T  18472613 aaatcaatgactttgtagtcgtcaacgttgtagatctggagacatgagtattccggagacttacatatagtcatatgtgtaggctttagtactttgttgt 18472514  T
Q  490 tttatg 495  Q
    ||||||    
T  18472513 tttatg 18472508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 20270837 - 20271046
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||| ||||||||| ||||| |||||  |||||||||||||||| |||| ||||||||| ||||||| ||| ||||||    
T  20270837 gttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagcttcaatccagtgca 20270936  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| ||||||||||||||   | ||  ||||||||||||||||||||| | | || | || |||| |||||| |||||||||||| |||| |||| |||    
T  20270937 gatcaaatcaatgactttggagtcttcaacgttgcagatccggagacatggatatttcggagacttaaatatagtcatatgtgtagactttagtactttg 20271036  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  20271037 tcgttttatg 20271046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 40774896 - 40775093
Alignment:
Q  300 tcgtctttgtgcggcgttgt-ttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaat 397  Q
    ||||||||||||  | |||| ||||||||| |||||  |||||||||||||||| |||| ||||||||| ||||||||||| |||| ||||| |||||||    
T  40774896 tcgtctttgtgcaaccttgtattgtctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagcttcgatccagtgtagatcaaatcaat 40774995  T
Q  398 gactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||   | ||  ||||||||||||||||||||| ||| |||| || |||| |||||| ||||||||||||||||| |||| |||||||||||||    
T  40774996 gactttggagtcttcaacgttgcagatccggagacatgggtattccggaaacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatg 40775093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 4070687 - 4070882
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  4070687 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgtttcagattgtcagatcagcttcgatctagtgcagatccaatcaatg 4070786  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||  ||||||| ||| |||||||||    
T  4070787 actttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggtatttgtactttg-cgttttatg 4070882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 293 - 495
Target Start/End: Original strand, 28618731 - 28618934
Alignment:
Q  293 ttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcca 391  Q
    ||||| |||||||||||||| |||| ||||| |||| |||||   ||||||||||| ||| || | ||||||||| ||||||||||| ||||||||||||    
T  28618731 ttgttcatcgtctttgtgcgacgttatttgtttttcttgtttctctcaggtatttgatcgctttagattgtcagatcagcttcgatccagtgcagatcca 28618830  T
Q  392 atcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttt 491  Q
    ||||||||||||| | |  | ||||||||||||||||| |||| | | || | || | || |||||| |||||||||||||| ||||||| |||||||||    
T  28618831 atcaatgactttggcgtcatccacgttgcagatccggaaacatggttatttcggaaatttaaatatagtcatatgtgtaggcatttgtactttgtcgttt 28618930  T
Q  492 tatg 495  Q
    ||||    
T  28618931 tatg 28618934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 8812142 - 8811934
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||| || |||||||||||||| |||||| ||| |||||||||||| |||| ||||||||| |||||||| || ||||||    
T  8812142 gttgttttgttcgtcgtctttgtg-ggagttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatcagcttcggtccagtgca 8812044  T
Q  386 gatccaatcaatgactttgacatttttc-acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacctt 484  Q
    |||| ||||||||||||| | | |  || |||||||||||| |||||||  ||| |||| || |||| |||||| ||||||||||||||||| |||| ||    
T  8812043 gatcaaatcaatgacttt-agagtcatcaacgttgcagatctggagacaatggtattccggagacttaaatatagtcatatgtgtaggctttagtacttt 8811945  T
Q  485 gtcgttttatg 495  Q
    | |||||||||    
T  8811944 gccgttttatg 8811934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 29310345 - 29310136
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  ||||| || ||||| ||||||||||| ||||||    
T  29310345 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcaaattatcagatcagcttcgatccagtgca 29310246  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | ||||||||||||||||| |||| | | |||| || | || |||||| ||||||||||||||  || ||| |||    
T  29310245 gatccaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtaggcaattctactttg 29310146  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  29310145 ccgttttatg 29310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 33486547 - 33486351
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||||||||| |||||  |||| ||||||||||| |||| ||||||| | ||||||||||| |||||||||| || |||||    
T  33486547 tcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcaaatcagcttcgatccagtgcagatcaaaccaatg 33486448  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   |  |  ||||||||||||||||| ||| ||| |||  || |||| |||||  ||||||||||||||||| |||| ||| |||||||||    
T  33486447 actttggagtcgtcaacgttgcagatccggaggcatgggtattctggagacttaaatatggtcatatgtgtaggctttagtactttgccgttttatg 33486351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 302 - 495
Target Start/End: Original strand, 15710680 - 15710876
Alignment:
Q  302 gtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgcagatccaatcaatgac 400  Q
    ||||||||| ||||||||||||||||| |||||  |||||||||||||||| ||| |||||||||| |||||| |||||||||||||||||||||||| |    
T  15710680 gtctttgtgtggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttcgaattgtcagatcagcttagatctagtgcagatccaatcaatggc 15710779  T
Q  401 tttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataa---tcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     ||| | |  |  ||||||||||||  |||||||| || |||| |||| || |||||||   ||||||| |||| ||||||||| |||| ||||||||    
T  15710780 -ttggcgtcatcaacgttgcagatctagagacatatgtattccggatatttaaatataatagtcatatgcgtagtcttttgtactttgttgttttatg 15710876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 22397539 - 22397421
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||| | ||||||||||||| | |||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  22397539 gttgttttgttcgtcgtctttgtgcgacattgtttgtctttcttatttcgttcaggtatttgttcgattcagattgtcagatcagcttcgatctagtgca 22397440  T
Q  386 gatccaatcaatgactttg 404  Q
    |||| ||||||||||||||    
T  22397439 gatcaaatcaatgactttg 22397421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 9034933 - 9034724
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| | |||| |||||||| |||||   ||||||||||| ||| |||| ||||||||| ||| ||||||||||||||    
T  9034933 gttggtttgttcctcgtctttgtgcgacattgtctgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagtttcgatctagtgca 9034834  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||||||||   |  |||| |||||||||||  |||||| | | || | || | || |||||| | |||||||||| | ||||||| |||    
T  9034833 gatccaatcaatgactttggggtcattcatgttgcagatccaaagacatggttatttcggagatttaaatatagttatatgtgtagacatttgtactttg 9034734  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  9034733 tcgttttatg 9034724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 300 - 492
Target Start/End: Original strand, 28500825 - 28501018
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||| ||||||| ||||||||||||| | |||  ||| |||||||||||| |||| ||||||| | || |||||||| ||| | |||||||||||||    
T  28500825 tcgtcttagtgcggcattgtttgtctttcttatttcgttcgggtatttgttcggttcagattgtcatatcaacttcgatccagtacggatccaatcaatg 28500924  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtttt 492  Q
    |||||| | |  | |||||||||||||||||||||| ||| |||  || || |||||||| |||||| ||||||  ||||||| ||||||||||    
T  28500925 actttgtcgtcctccacgttgcagatccggagacatgggtattctggagacatgaatatagtcatatctgtaggtgtttgtactttgtcgtttt 28501018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 31645952 - 31646161
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| || | |||||   ||||||||||| ||  |||| ||||||||| || |||||||| ||||||    
T  31645952 gttggtttgttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcagttcagattgtcagatcaacttcgatccagtgca 31646051  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||||||||   |  | ||||||||||||||||| |||| | | |||| || | || |||||| ||||||||||||||  |||||| |||    
T  31646052 gatccaatcaatgactttggtgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtaggcaattgtactttg 31646151  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  31646152 ccgttttatg 31646161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 4726921 - 4726771
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    ||||||||| |||  ||||||||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||||| ||||||| ||| ||||    
T  4726921 atgttggttagttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcaatccagtg 4726822  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    |||||||||||||||||||||   |  |  |||||||||||||||||||||    
T  4726821 cagatccaatcaatgactttggtgtcatctacgttgcagatccggagacat 4726771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 6887169 - 6886960
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| || ||   ||||||||||| ||  |||| ||||| |||  |||||||||| ||||||    
T  6887169 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgcttctctcaggtatttgatcagttcagattgttagattagcttcgatccagtgca 6887070  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | ||||||||||||||||| |||| |   |||| || | || |||||| ||||||||||||||  |||||| |||    
T  6887069 gatccaatcaatgactttggcgtcatccacgttgcagatccggatacatggtaattccggagatttaaatatagtcatatgtgtaggcaattgtactttg 6886970  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  6886969 ccgttttatg 6886960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 495
Target Start/End: Complemental strand, 40565141 - 40564939
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| ||||||||||||| ||||||||||||||  |   |  ||||||| |||||| |||||| ||||||||| ||| ||||||| |||||| ||||    
T  40565141 tttgtttgtcgtctttgtgcgacgttgtttgtcttt--tccctagttcaggtgtttgtttgattcatattgtcagatcagtttcgatccagtgcaaatcc 40565044  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    || ||||||||||| | |  |  ||||||||||||||||||||| | | |||| || | || |||||| |||||| ||||||||| ||||| ||||||||    
T  40565043 aaccaatgactttggcgtcatcaacgttgcagatccggagacatggctattccggagattttaatatagtcatatttgtaggcttatgtactttgtcgtt 40564944  T
Q  491 ttatg 495  Q
    |||||    
T  40564943 ttatg 40564939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 291 - 404
Target Start/End: Complemental strand, 19646028 - 19645914
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatc 389  Q
    |||||||| ||||||||||| | ||||||||||||||| |||||  || | ||||||||| |||||| ||||||||| ||| ||||||| ||||||||||    
T  19646028 gtttgtttgtcgtctttgtgtgacgttgtttgtctttcttgtttctttgaagtatttgttagattcagattgtcagatcagattcgatcaagtgcagatc 19645929  T
Q  390 caatcaatgactttg 404  Q
    |||||||||||||||    
T  19645928 caatcaatgactttg 19645914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 20146207 - 20146092
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcag 386  Q
    |||| ||||||| |||||||||| ||||||||||||||||||   | || ||||||| |||||||| ||  ||||| ||| |||||||||||||||||||    
T  20146207 gttgttttgtttgtcgtctttgtacggcgttgtttgtctttcccctcttgttcaggtgtttgttcggtt--attgttagatcagcttcgatctagtgcag 20146110  T
Q  387 atccaatcaatgactttg 404  Q
    ||||||||||||||||||    
T  20146109 atccaatcaatgactttg 20146092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 494
Target Start/End: Original strand, 34844066 - 34844247
Alignment:
Q  314 cgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacattttt 412  Q
    ||||||||||||||  |||||  |||||||||||| |||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||   |  |     
T  34844066 cgttgtttgtcttttttgtttcgttcaggtatttgctcgattcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcgtc 34844165  T
Q  413 cacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
     | |||||||| ||||||| || ||| |||  |  |||| |||||| ||||||||||||||||| |||| ||| ||||||||    
T  34844166 aatgttgcagacccggagatatgggtattctggcgacttaaatatagtcatatgtgtaggctttagtactttgccgttttat 34844247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 434
Target Start/End: Original strand, 2415523 - 2415671
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  | ||||||||||| | ||||||||||||  ||||   |||||||||||||||| |||| ||||||||| ||||||||||| ||||||    
T  2415523 gttggtttgttcgttgtctttgtgcgacattgtttgtcttttttgttactttcaggtatttgttcggttcagattgtcagatcagcttcgatccagtgca 2415622  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||| ||||||| |||||| || |  | ||||||||||||||| ||||||    
T  2415623 gattcaatcaacgactttaacttcatccacgttgcagatccgaagacat 2415671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 35906405 - 35906601
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||| || || ||||||||||| |||||||||||||||||||    
T  35906405 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattatcggatcagcttcgatccagtgcagatccaatcaatg 35906504  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||| ||||||||||||| |||| | | || | || | || |||||| ||||||||||||||  |||||  |||||||||||||    
T  35906505 actttggcgtcatccacattgcagatccggatacatggttatttcggagatttaaatatagtcatatgtgtaggcaattgtattttgtcgttttatg 35906601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 496
Target Start/End: Complemental strand, 28389100 - 28388889
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggt-atttgttcgattca-attgtcagaccagcttcgatctagtgc 384  Q
    |||||||| ||| ||||||||  ||||||||||||||| ||  |||||  |||| || ||||||||  |||| ||||||| | |||||| |||| ||||     
T  28389100 gttggtttatttgtcgtctttacgcggcgttgtttgtcatttttgtttctttcaagtcatttgttcagttcagattgtcatatcagcttagatccagtga 28389001  T
Q  385 agatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacctt 484  Q
    ||||| ||||||||||||||   |  | || ||||||||||| |||| || ||| |||| || |||||||||||||||||||||||| ||||||||  ||    
T  28389000 agatcaaatcaatgactttggtgtcgtccatgttgcagatccagagatatgggtattccggagacttgaatataatcatatgtgtagacttttgtatttt 28388901  T
Q  485 gtcgttttatgt 496  Q
    || |||||||||    
T  28388900 gttgttttatgt 28388889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 32393476 - 32393637
Alignment:
Q  35 aaaaaactgttctaagatctccaacata-gactctataa--ccaagaaaatcttagagatcaagcctatacataacaacatggaaaaccaatcaaaacac 131  Q
    |||||| || ||| |||||||||||| | ||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||  | |||||| |||    
T  32393476 aaaaaaatgctctgagatctccaacacaagactctataaaaccaagaaaatcttagagatcaagcctacacataacaacatgaaaagtctatcaaagcac 32393575  T
Q  132 caaacaatataacctgaaattttttgt-cgattatatttctcaaacaccggttatcattgatactttaa 199  Q
    |||||||||        ||||| ||||  |||||||||| ||||||||| |||||||||||||||||||    
T  32393576 caaacaata-------caatttattgtgggattatatttgtcaaacaccagttatcattgatactttaa 32393637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 300 - 481
Target Start/End: Original strand, 41358175 - 41358347
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||| |||||||||||||||||||||||| ||||||| | ||||||||||||| |||| |||||||||          || | ||||||| |||||||||    
T  41358175 tcgtgtttgtgcggcgttgtttgtctttcttgttttaattaggtatttgttcggttcagattgtcaga----------tccaatgcagattcaatcaatg 41358264  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    |||||||| |  |  ||||| |||||||| |||||||| | |||||||||||| |||||| |||||||| ||| |||||||||    
T  41358265 actttgacgtcgtcaacgttacagatccgaagacatagttattccagatactttaatatagtcatatgtttagacttttgtac 41358347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 495
Target Start/End: Original strand, 5378426 - 5378634
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||  ||||||||||||| | ||| ||||||||| |||||   |||| | |||| ||| |||| |||||| || ||| ||||||| | |||||    
T  5378426 ttggtttgttcgtcgtctttgtgcgacattgcttgtctttcttgtttctctcagatgtttgatcggttcagattgtcggatcagtttcgatccaatgcag 5378525  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    ||| |||||||||||||| | |  | ||||||||||||||||||||||   | |||| || | || ||| || |||||||||||||  ||||||||||||    
T  5378526 atcaaatcaatgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatgtagtcatatgtgtaggaatttgtaccttgt 5378625  T
Q  487 cgttttatg 495  Q
     ||||||||    
T  5378626 tgttttatg 5378634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 434
Target Start/End: Original strand, 34874000 - 34874132
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    |||||||| ||||||||||||||||| |||||  ||||| ||||| | |||||||| |||||| | || ||||||||||||||||||||||| |||||||    
T  34874000 tctttgtgtggcgttgtttgtctttcttgtttctttcagatatttatccgattcaaattgtcatatcaacttcgatctagtgcagatccaatgaatgact 34874099  T
Q  402 ttgacatttttcacgttgcagatccggagacat 434  Q
    ||| | |  |  |||||||| ||||||||||||    
T  34874100 ttggcgtcgtcaacgttgcatatccggagacat 34874132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 496
Target Start/End: Original strand, 8957329 - 8957539
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| | ||||||||||| ||||||||||||||  | | || ||||||| |||||||  |||| ||||||||| ||||||||||| | ||||    
T  8957329 gttgttttgtttgttgtctttgtgcgacgttgtttgtcttttctctcttgttcaggtgtttgttcagttcagattgtcagatcagcttcgatccaatgca 8957428  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||| ||| ||||||||||  | |  |  |||||||||||||||||| || | | || | || | || |||||| |||||| ||| ||||| ||||| |||    
T  8957429 gattcaaccaatgacttttgcgtcatcaacgttgcagatccggagatatggctatttcggagattttaatatagtcatatttgttggcttgtgtactttg 8957528  T
Q  486 tcgttttatgt 496  Q
    |||||||||||    
T  8957529 tcgttttatgt 8957539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 32390638 - 32390520
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgca 385  Q
    ||||||| |||| | ||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| |||| |||||  |||||| |||||||| |    
T  32390638 gttggttcgtttgttgtctttgtgcggcgttgtttgtctttcttgtttcattcgggtatttgttcggttcaaattatcagattagcttcaatctagtgta 32390539  T
Q  386 gatccaatcaatgactttg 404  Q
    |||| ||| ||||| ||||    
T  32390538 gatctaattaatgattttg 32390520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 480
Target Start/End: Complemental strand, 41063387 - 41063193
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||| ||| ||||| ||| |||||||||| |||| | |||   || | |||||| ||| |||| ||| | | | ||||||||||| ||||||    
T  41063387 gttggtttgtttgtcggctttgagcgacgttgtttgtttttcttatttctctcggctatttgatcggttcagattcttatatcagcttcgatccagtgca 41063288  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgta 480  Q
    |||||||| ||||||||||||||  | ||||||||||||||| |||||| | | |||| || | || ||||||||||||||| ||| | ||||||    
T  41063287 gatccaattaatgactttgacatcatccacgttgcagatccgcagacatggttattccggagatttaaatataatcatatgtatagacatttgta 41063193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 292 - 463
Target Start/End: Complemental strand, 6074722 - 6074550
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| ||||||||||||| | ||||||||||||    | || |||| || |||||||| |||| ||||||||| || |||||||| |||| ||||||    
T  6074722 tttgtttgtcgtctttgtgcgaccttgtttgtcttttccctcttgttcaagtgtttgttcggttcagattgtcagatcaacttcgatccagtgtagatcc 6074623  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcat 463  Q
    |||||||||||||| | |  |  ||||||||||||||||| ||| | | ||||||||| || |||||| ||||    
T  6074622 aatcaatgactttggcgtcatcaacgttgcagatccggaggcatggttattccagatattttaatatagtcat 6074550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 492
Target Start/End: Original strand, 34866563 - 34866760
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgcag----atccaatc 394  Q
    |||||||||| |||||| |||| |||||| | ||| |||||| |||||||||||||| |||||||| |  ||||||||||||||||||    ||||||||    
T  34866563 tcgtctttgtacggcgtagtttatctttcttttttcattcagatatttgttcgattcaaattgtcatataagcttcgatctagtgcagatccatccaatc 34866662  T
Q  395 aatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtttt 492  Q
    ||| | |||||| |  |  | |||||||||||||||||||   | || | || ||||||||||   ||||||||||| ||||||||| ||| ||||||    
T  34866663 aataattttgacgtcgtcaatgttgcagatccggagacatgaatatttcggagacttgaatatggccatatgtgtagccttttgtactttgacgtttt 34866760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 10924124 - 10923916
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||| || |||| |||||   |||| |||||| ||| ||||| ||||| || || |||| ||  ||||||    
T  10924124 gttggtttgttcgtcgtctttgtgcgacgttgtt-gtttttcttgtttctctcagatatttgatcggttcaaattgtcggatcaacttcaatgcagtgca 10924026  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||| ||||||| | || | |||||||||||||||||   || | | |||  || | || |||||| |||||||| ||||| ||||||| |||    
T  10924025 gatccaatcaacgactttggcgttatccacgttgcagatccggatgaatggttattcaggagatttaaatatagtcatatgtataggcatttgtactttg 10923926  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  10923925 tcgttttatg 10923916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 495
Target Start/End: Complemental strand, 14910638 - 14910458
Alignment:
Q  316 ttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttca 414  Q
    ||||||||||||| |||||  |||| ||||||||||| || | ||||||||| || |||||||| |  ||| ||| |||||||||||||||  || |  |    
T  14910638 ttgtttgtctttcttgtttcgttcatgtatttgttcgttttagattgtcagatcaacttcgatccatcgcatatcaaatcaatgactttgaagttgtcaa 14910539  T
Q  415 cgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    || |||||||||||||||||  || |||| || |||| |||||| | ||||||||||| ||| |||  ||| |||||||||    
T  14910538 cgatgcagatccggagacatgagtattccggagacttaaatatagttatatgtgtaggttttagtattttgccgttttatg 14910458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 29154356 - 29154552
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||||||  |||| ||||||||| | |||  || ||| ||||||||| || | ||||||| |   ||||||||  |||||||||||||| ||||    
T  29154356 tcgtctttgtgcgatgttggttgtctttcttttttcgtttaggcatttgttcggtttagattgtcaaataggcttcgattcagtgcagatccaattaatg 29154455  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | ||||   |  | || |||||||||||||||||||  || |||| || | || ||||||||| |||||||||| |||||||| |||||||||||||    
T  29154456 attttggtgtcatccatgttgcagatccggagacatgagtattccggagagttaaatataatcgtatgtgtaggtttttgtactttgtcgttttatg 29154552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 495
Target Start/End: Complemental strand, 17325603 - 17325444
Alignment:
Q  337 ttcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacata 435  Q
    ||||||| ||||||||||||| ||||||||| || |||| |||  |||||||||||| ||||||||||| | |  |    ||| ||||||||||| |||     
T  17325603 ttcaggtgtttgttcgattcagattgtcagatcaacttcaatccggtgcagatccaaccaatgactttgtcgtcatcatagttacagatccggaggcatg 17325504  T
Q  436 ggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
      | ||||||| | || |||||| |||||| ||||||||| ||||| ||||| |||||||    
T  17325503 actattccagagattttaatatagtcatatatgtaggcttatgtactttgtcattttatg 17325444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 495
Target Start/End: Complemental strand, 12524583 - 12524446
Alignment:
Q  358 attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat 457  Q
    ||||||||| || ||| |||| |||| ||||||||||||||||||||   |  |  |||||| ||||||  ||||||   ||||   || |||| |||||    
T  12524583 attgtcagatcaactttgatccagtgtagatccaatcaatgactttggtgtcatcaacgttgtagatccaaagacatgattgtttaggagactttaatat 12524484  T
Q  458 aatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||| ||||||||||||||| ||||| |||||||    
T  12524483 aatcatatttgtaggcttttgtactttgtcattttatg 12524446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 41988275 - 41988388
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||||||| ||||||||||||  |||||  || | ||||||||| | ||||  |||||| | ||||||| ||  ||||||    
T  41988275 gttgttttgtttgtcgtctttgtgcggctttgtttgtcttttttgtttcgtttaagtatttgtttgtttcaggttgtcatatcagcttcaatgcagtgca 41988374  T
Q  386 gatccaatcaatga 399  Q
    ||| ||||||||||    
T  41988375 gattcaatcaatga 41988388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 37425147 - 37425211
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttc 351  Q
    |||| ||||||| ||||||||||||| ||||||||||| ||| |||||  | |||||||||||||    
T  37425147 gttgttttgtttgtcgtctttgtgcgacgttgtttgtcattcttgtttcgtacaggtatttgttc 37425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 496
Target Start/End: Original strand, 7151062 - 7151144
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||||||||||||| |||||||  || ||||  | ||||||||||| |||| | |||||| || ||||| ||||||||||||||    
T  7151062 acgttgcagatccagagacattagtattccgaagacttgaatatagtcatgtttgtaggtttatgtactttgtcgttttatgt 7151144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Original strand, 25962170 - 25962251
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| |||||||||||||| | | |||| || ||||||||||| |||||| ||||||| |   ||| |||||||||||||    
T  25962170 acgttgtagatccggagacatggatattccggaaacttgaatatagtcatatttgtaggcatagatactttgtcgttttatg 25962251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Original strand, 29098046 - 29098127
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||||||  |||||||  |  |||| || ||||||||||| |||||| ||||||| | ||||||||| |||||||||    
T  29098046 acgttgcagatcaagagacatgaggattccggagacttgaatatagtcatatttgtaggcatatgtaccttgccgttttatg 29098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 34893922 - 34893822
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   |||| |||||| ||| |||| |||||||||  | ||||| || |||||| || |||||||||    
T  34893922 tcgtctttgtgcgacgttgtttgtttttcttgtttccctcagctatttgatcggttcatattgtcagattaacttcgttccagtgcaaattcaatcaatg 34893823  T
Q  399 a 399  Q
    |    
T  34893822 a 34893822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 39591325 - 39591381
Alignment:
Q  440 ttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||||||| |||| |||||| |||||| ||||||||| ||||  ||||||||||||||    
T  39591325 ttccagagactttaatatattcatatatgtaggcttatgtattttgtcgttttatgt 39591381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 5e-48; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 23067839 - 23067630
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  23067839 gttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 23067740  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | |||||||||||| ||||||||| | | |||| |||| || |||||| |||||||||||||| |||||||||||    
T  23067739 gatccaatcaatgactttggcgtcatccacgttgcagattcggagacatggctattccggatatttaaatatagtcatatgtgtaggcctttgtaccttg 23067640  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  23067639 ccgttttatg 23067630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 305 - 495
Target Start/End: Complemental strand, 46775830 - 46775640
Alignment:
Q  305 tttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgacttt 403  Q
    |||||||||||||||||||||||  || ||  |||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||    
T  46775830 tttgtgcggcgttgtttgtcttttttgcttcgttcatgtatttgttcgattcagattgtcagatcagcttcgatctagtgcagatccaatcaatgaattt 46775731  T
Q  404 gacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||| |  |  ||||||||||| |||| ||||| || |||| || |||||||||||||||||||||||||||||||| | |||||||||||||    
T  46775730 gacgtcatcaacgttgcagatacggatacata-gtattccggagacttgaatataatcatatgtgtaggcttttgtgctttgtcgttttatg 46775640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 46716885 - 46716676
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  46716885 gttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 46716786  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | ||||||||||||||||||| || | | |||| || | || |||||| |||||||||||||| |||||||||||    
T  46716785 gatccaatcaatgactttggcgtcatccacgttgcagatccggagatatggctattccggagatttaaatatagtcatatgtgtaggcatttgtaccttg 46716686  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  46716685 ccgttttatg 46716676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 300 - 494
Target Start/End: Complemental strand, 46728898 - 46728703
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||| || ||||||||| ||||| |||||  |||||||||||||||| |||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  46728898 tcgtctttgtacgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatg 46728799  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    |||||||  |  |  |||||||| || ||||||||| ||| ||||||| |||| |||||| ||||||||||||||||| |||| ||| ||||||||    
T  46728798 actttgaagtcgtcaacgttgcaaattcggagacatgggtattccagagacttaaatatagtcatatgtgtaggctttagtactttgccgttttat 46728703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 4634406 - 4634615
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||||| ||||||||||| ||||||    
T  4634406 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgca 4634505  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||||||||   |  | ||||||||||||||||| |||| | | |||| |||| || |||||| ||||||||||||||  |||||| |||    
T  4634506 gatccaatcaatgactttggtgtcatccacgttgcagatccggatacatggttattccggatatttaaatatagtcatatgtgtaggcaattgtactttg 4634605  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  4634606 tcgttttatg 4634615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 293 - 495
Target Start/End: Complemental strand, 30470108 - 30469905
Alignment:
Q  293 ttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcca 391  Q
    |||||| ||||||||||||| |||||||||| |||| |||||   |||||| |||| ||| |||| ||||||||| ||||||||||||||||||||||||    
T  30470108 ttgtttgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcagatcagcttcgatctagtgcagatcca 30470009  T
Q  392 atcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttt 491  Q
    ||||||||||||| | |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| ||||||| ||  |||||    
T  30470008 atcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtacttttccgttt 30469909  T
Q  492 tatg 495  Q
    ||||    
T  30469908 tatg 30469905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 287 - 492
Target Start/End: Original strand, 42972161 - 42972367
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||||||| |||| |||| ||| |||||| |||||   ||||||||||| ||| |||| ||||||||| || |||||||| ||||||    
T  42972161 gttggtttgttcgtcgtctttatgcgacgttatttttctttcttgtttctctcaggtatttgatcggttcagattgtcagatcaacttcgatccagtgca 42972260  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||||||   | ||||| | | || |||||| |||||||||||||| |||||||||||    
T  42972261 gatccaatcaatgactttgacgtcatccacgttgcagatccggagacatgactattccaaagatttaaatatagtcatatgtgtaggcatttgtaccttg 42972360  T
Q  486 tcgtttt 492  Q
     ||||||    
T  42972361 ccgtttt 42972367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 14346554 - 14346763
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||| ||||||| ||||||||||||||| |||||  |||||||||||| |||||||| ||||||||| ||||||||||| ||||||    
T  14346554 gttgttttgttcgtcgtcgttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgctcgattcagattgtcagatcagcttcgatccagtgca 14346653  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     ||| ||||||||||||||   |  |  ||||||||||||||||| |||  || ||| ||| |||| |||||| ||||||||||||||||| |||| |||    
T  14346654 aatcaaatcaatgactttggagtcgtcaacgttgcagatccggagccatgtgtattctagagacttaaatatagtcatatgtgtaggctttagtactttg 14346753  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  14346754 ccgttttatg 14346763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 29474306 - 29474110
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||  |||| |||||  |||||||||||||||| |||| |||||||||||| |||||||| |||||||||| ||||||||    
T  29474306 tcgtctttgtgcgacgttgtttgcttttcttgtttcgttcaggtatttgttcggttcagattgtcagaccatcttcgatccagtgcagatcaaatcaatg 29474207  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   |  |  ||||||||||||||||||||| ||| |||| ||  ||| |||||| |||||||||||| |||| |||| ||| |||||||||    
T  29474206 actttggagtcgtcaacgttgcagatccggagacatgggtattccggaggcttaaatatagtcatatgtgtagtctttagtactttgccgttttatg 29474110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 476
Target Start/End: Original strand, 16991995 - 16992185
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||||| ||||||||| ||||| |||||| ||||||||||  |||| |||| ||| ||||| ||||||||||| ||||||    
T  16991995 gttgttttgtttgtcgtctttgtgcgacgttgtttgcctttcttgttttgttcaggtattctttcggttcagattatcagatcagcttcgatccagtgca 16992094  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttt 476  Q
     ||| |||||||||||||||  |  |  || |||||||||||||||||| ||| ||||||| |||| |||||  |||||||||||||||||    
T  16992095 tatcaaatcaatgactttgaagtcgtaaacattgcagatccggagacatgggtattccagagacttaaatattgtcatatgtgtaggcttt 16992185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 43156899 - 43157109
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgc- 384  Q
    |||| ||||||  ||| ||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||| ||||| ||| ||||||||||  |||||     
T  43156899 gttgttttgttcgtcgactttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcggttcagattgttagatcagcttcgattcagtgca 43156998  T
Q  385 agatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacctt 484  Q
    ||||| ||||||||||||||   |  |  |||||||||||||||| ||||  || ||||| | |||| |||||| ||||||||||||||||| |||| ||    
T  43156999 agatcaaatcaatgactttggagtcctcaacgttgcagatccggacacatgagtattccatagacttaaatatagtcatatgtgtaggctttagtacttt 43157098  T
Q  485 gtcgttttatg 495  Q
    |||||||||||    
T  43157099 gtcgttttatg 43157109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 28990421 - 28990630
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  | |||||||||||| ||||| |||||||| |||||  |||||| ||||||||  |||| |||||||||  |||||||||||||||||    
T  28990421 gttggtttgttcgttgtctttgtgcggtgttgtctgtctttcttgtttcgttcaggcatttgttccgttcagattgtcagattagcttcgatctagtgca 28990520  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     ||||||||||||| |||||| |  | ||||||||||||| | ||||||  || |||  || |||| ||||| |||||||||| || ||||||||| |||    
T  28990521 tatccaatcaatgattttgacgtcgtccacgttgcagatctgaagacatgtgtattctggagactttaatattatcatatgtgcagacttttgtactttg 28990620  T
Q  486 tcgttttatg 495  Q
    | ||||||||    
T  28990621 ttgttttatg 28990630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 287 - 481
Target Start/End: Complemental strand, 26576493 - 26576299
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||| ||||||| | ||||||||||||| |||||  ||||||||||||||||||||| ||||||| | ||||||||||||||||||    
T  26576493 gttgttttgtttgtcgtcgttgtgcgac-ttgtttgtctttcctgtttcgttcaggtatttgttcgattcagattgtcaaatcagcttcgatctagtgca 26576395  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    |||| ||||||||||||||   |  |  ||| |||||||||| ||||||  || |||| || |||  |||||| ||||||||||||||||| ||||    
T  26576394 gatcaaatcaatgactttggagtcgtcaacgatgcagatccgaagacatgagtattccggagactcaaatatagtcatatgtgtaggctttagtac 26576299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 494
Target Start/End: Complemental strand, 29577099 - 29576904
Alignment:
Q  301 cgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaa-tg 398  Q
    |||||||||||||||||||||||||||  |||||  |||||||||||||||| |||| ||||||| | | |||| |||| || ||| |||||||||| ||    
T  29577099 cgtctttgtgcggcgttgtttgtcttttttgtttcgttcaggtatttgttcggttcagattgtcatatcggcttagatccagcgcatatccaatcaaatg 29577000  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    | |||| | |  |  |||||||||||||| ||||||   | |||| || ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  29576999 attttggcgtcgtcaacgttgcagatccgaagacatgaatattccggagacttgaatatagtcatatgtgtaggcttttgtaccttgccgttttat 29576904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 496
Target Start/End: Complemental strand, 37869408 - 37869198
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||| | ||||||||||| |||| ||| | |||| |||||   | ||||||||| ||  |||| ||||||||| ||||||||||| ||||||    
T  37869408 gttggtttgtttgttgtctttgtgcgacgttatttatttttcttgtttctctaaggtatttgatcagttcagattgtcagatcagcttcgatccagtgca 37869309  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     |||||||||||||||||| | |  | ||||||||||||||| |||||| | | | || || | || |||||| |||||||||||||| ||||||| |||    
T  37869308 aatccaatcaatgactttggcgtcatccacgttgcagatccgaagacatggttatcccggagatttaaatatagtcatatgtgtaggcatttgtactttg 37869209  T
Q  486 tcgttttatgt 496  Q
    |||||||||||    
T  37869208 tcgttttatgt 37869198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 9474530 - 9474321
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   | ||||||||| | | |||| |||||| || || |||||||| |||| |    
T  9474530 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgattggttcagattgtctgatcaacttcgatccagtgta 9474431  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||||| |  | ||| |||||||||| ||||||| | | |||| |||| || |||||| |||||||||||||| ||||||| |||    
T  9474430 gatccaatcaatgactttgacgtcatccacattgcagatcctgagacatggttattccggatatttaaatatagtcatatgtgtaggcatttgtactttg 9474331  T
Q  486 tcgttttatg 495  Q
     | |||||||    
T  9474330 ccattttatg 9474321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 14542503 - 14542294
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||||| ||||||||||| ||||||    
T  14542503 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgca 14542404  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||||||||   |  | ||| ||||||||||||| |||| | | |||| || | || |||||| |||||| |||||||  |||||| |||    
T  14542403 gatccaatcaatgactttgttgtcatccactttgcagatccggatacatggttattccggagatttaaatatagtcatatatgtaggcaattgtactttg 14542304  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  14542303 ccgttttatg 14542294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 38434722 - 38434930
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  |||||||||| || ||||||||||||||| |||||  ||||||||||||||| ||||| |||   ||| ||||||||||| ||||||    
T  38434722 gttgttttgttcgtcgtctttgtccgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattactagatcagcttcgatccagtgca 38434821  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||  ||||||||||||||   |  |  ||||||||||||||| ||||| ||| |||| || |||| |||||| ||||||||||||||||| |||| |||    
T  38434822 gataaaatcaatgactttggagtcgtcaacgttgcagatccgg-gacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttg 38434920  T
Q  486 tcgttttatg 495  Q
    || |||||||    
T  38434921 tcattttatg 38434930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 491
Target Start/End: Complemental strand, 15729959 - 15729767
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||| ||||| |||||  |||||||||||||||  |||| ||||||||| || |||||||| |||||||||| ||||||||    
T  15729959 tcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcagttcagattgtcagatcaacttcgatccagtgcagatcaaatcaatg 15729860  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttt 491  Q
    | ||||   |  |  | ||||||||| ||||||||||||| || | || |||| |||||| ||||||||||||||||| |||| ||| |||||    
T  15729859 attttggagtcgtcaatgttgcagattcggagacataggtatttcggagacttaaatatagtcatatgtgtaggctttagtactttgccgttt 15729767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 9661976 - 9662185
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||| ||| ||||||||||| ||||||    
T  9661976 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatcagcttcgatccagtgca 9662075  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||| ||||||||||||||| | |  | ||||||||||||||||| |||| | | |||  || | || |||||| |||||||||||| |  |||||| |||    
T  9662076 gatgcaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatatagtcatatgtgtagacaattgtactttg 9662175  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  9662176 ccgttttatg 9662185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 29589352 - 29589143
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| | ||||||||||| | ||||||||| ||| |||||  |||||||||||||||  |||| |||||  || || |||||||| ||||||    
T  29589352 gttgttttgtttgttgtctttgtgcgaccttgtttgtcattcttgtttcgttcaggtatttgttcatttcagattgtttgatcaacttcgatccagtgca 29589253  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| | ||||||||||||   | ||  |||||||||||||||||||||  || |||  || |||| |||||| ||||||||||| ||||| |||| |||    
T  29589252 gatcaactcaatgactttggagtcttcaacgttgcagatccggagacatgagtattctggagacttaaatatagtcatatgtgtatgctttagtactttg 29589153  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  29589152 tcgttttatg 29589143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 32189103 - 32189311
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   |||||| |||| | | |||| ||||||||| ||||||||| | ||||||    
T  32189103 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgattggttcagattgtcagatcagcttcga-ccagtgca 32189201  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | ||||||||||||| |||||| |   |  ||| || | || ||||||||||||||||||||| ||||||| |||    
T  32189202 gatccaatcaatgactttggcgtcatccacgttgcagatctggagacgtgtttactccggagatttaaatataatcatatgtgtaggcatttgtactttg 32189301  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  32189302 ccgttttatg 32189311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 51646230 - 51646429
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||||||  |||||||||||||| |||||   ||| ||||||||||| |||| ||| ||||| ||||||||||| |||||||||| |||| |||    
T  51646230 tcgtctttgtgcgatgttgtttgtctttcttgtttcgctcaagtatttgttcggttcagattatcagatcagcttcgatccagtgcagatcaaatcgatg 51646329  T
Q  399 actttgacatttttcacgtt---gcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||  ||  |  |||||   ||||||||| |||||| ||| ||||||| |||| |||||| |||||||||||||||||  ||| ||| |||||||||    
T  51646330 actttggaatcgtcaacgttgcagcagatccgaagacatgggtattccagagacttaaatatagtcatatgtgtaggctttaatactttgccgttttatg 51646429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 54420719 - 54420522
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagctt-cgatctagtgcagatccaatcaat 397  Q
    ||||||||||||| |||||||||| |||| |||||   | ||||||||| ||| |||| ||||||||| || ||| ||||||||||||||| ||||||||    
T  54420719 tcgtctttgtgcgacgttgtttgtttttcttgtttctctgaggtatttgatcgcttcagattgtcagatcaactttcgatctagtgcagattcaatcaat 54420620  T
Q  398 gactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||| |  | ||||||||||||||||| |||| | | |||| || | || |||||| ||||||||||| || ||||||| |||  ||||||||    
T  54420619 gactttgacgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgtaagcatttgtactttgatgttttatg 54420522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 494
Target Start/End: Original strand, 53903717 - 53903910
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||| || || |||||||||| |||| |||||   ||||||||||| ||| |||| |||| |||| ||||||||||| |||||||||||||||||||    
T  53903717 tcgtcttcgtacgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattgccagatcagcttcgatccagtgcagatccaatcaatg 53903816  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    |||||| | |  | |||||| |||||| ||| ||||   | |||| |||| || |||||| |||||||||||||| ||||||| ||||||||||||    
T  53903817 actttggcgtcatccacgttacagatctggaaacat--ttattccggatatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttat 53903910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 485
Target Start/End: Original strand, 2945260 - 2945459
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    ||||||||||| ||||||| | |||||| ||||| || |||  |||||  |||||||||||||||| |||| ||||||||| ||  ||||||| |||| |    
T  2945260 gttggtttgttcatcgtctgtatgcggcattgttagtgttttttgtttcgttcaggtatttgttcggttcagattgtcagatcaatttcgatccagtgaa 2945359  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||  ||||||||||||||| | |  || || |||||||||||||||||||||| || | || ||||||||||| | | ||||  ||||||||||||||||    
T  2945360 gacacaatcaatgactttggcgtcgttaacattgcagatccggagacataggtatttcggagacttgaatatagtaacatgttcaggcttttgtaccttg 2945459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 403
Target Start/End: Original strand, 3169547 - 3169666
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtg 383  Q
    ||||||| |||||  | ||||||||||||||||||||||||||| |||||  ||||| |||||||||| ||| |||||||||| ||||||| ||| ||||    
T  3169547 atgttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgttcggttcaaattgtcagatcagcttcaatccagtg 3169646  T
Q  384 cagatccaatcaatgacttt 403  Q
    ||||| ||||||||||||||    
T  3169647 cagattcaatcaatgacttt 3169666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 495
Target Start/End: Complemental strand, 4959546 - 4959356
Alignment:
Q  305 tttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgcagatccaatcaatgacttt 403  Q
    |||||||| ||||||||||||||| |||||  |||  ||||||||||| ||| || ||||||| |||||| ||| |||||||||||||||||||||||||    
T  4959546 tttgtgcgacgttgtttgtctttcttgtttcgttcctgtatttgttcggttcgaaatgtcagatcagcttagat-tagtgcagatccaatcaatgacttt 4959448  T
Q  404 gacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | | |  |   |||||||||||||||||||| ||| ||||  | ||||||||||| ||||  |||||| ||||||||| |||  ||||||||    
T  4959447 ggcgtcgtcagcgttgcagatccggagacatgggtattccgtagacttgaatatagtcatgggtgtagacttttgtactttgcagttttatg 4959356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 285 - 494
Target Start/End: Original strand, 1125062 - 1125272
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtg 383  Q
    |||||| ||||| | |||||||| |||| ||||| ||||||||| |||||  |||||||||||||| | ||||| |||||||| ||||||||||| ||||    
T  1125062 atgttgttttgtctgtcgtctttttgcgacgttgattgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcagatcagcttcgatccagtg 1125161  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    |||||| ||||||||| |||||  |  |  |||||| |||||| |||||||   ||||||  | ||||  ||||| ||||||||||| |||||  ||| |    
T  1125162 cagatcaaatcaatgattttgaagtcgtcaacgttgaagatccagagacatgaatgttccgtagacttacatatagtcatatgtgtatgctttaatactt 1125261  T
Q  484 tgtcgttttat 494  Q
    |||||||||||    
T  1125262 tgtcgttttat 1125272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 31601349 - 31601138
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtat--ttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||  ||||||||||||| | |||||| |||||| |||||   ||||||||  ||| | | |||| ||||||||| || |||||||| ||||    
T  31601349 gttggtttgttcgtcgtctttgtgcgacattgtttatctttcttgtttctctcaggtatatttgattggttcagattgtcagatcaacttcgatccagtg 31601250  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    ||||||||||||||||||||||| |  | ||||||||||| || ||||||| | | || | || | || |||||| | |||||||||||| |||||||||    
T  31601249 cagatccaatcaatgactttgacgtcatccacgttgcagacccagagacatggttatttcggagatttaaatatagttatatgtgtaggcatttgtacct 31601150  T
Q  484 tgtcgttttatg 495  Q
    || || ||||||    
T  31601149 tgccgctttatg 31601138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 495
Target Start/End: Complemental strand, 52555714 - 52555522
Alignment:
Q  304 ctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactt 402  Q
    |||||| || ||||||||||||||| |||||   | ||||||||  ||| |||| ||||||| | ||||||||||| |||||||||||||||||||||||    
T  52555714 ctttgtacgacgttgtttgtctttcttgtttctcttaggtatttaatcggttcagattgtcaaatcagcttcgatccagtgcagatccaatcaatgactt 52555615  T
Q  403 tgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    || | |  | || ||||||||| |||||||||   | |||| || | || |||||| |||||||||||||| ||||||||||||  |||||||    
T  52555614 tggcgtcatccatgttgcagattcggagacatgactattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgtacttttatg 52555522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 330 - 472
Target Start/End: Complemental strand, 1657514 - 1657371
Alignment:
Q  330 tgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccgg 428  Q
    |||||| || |||||||||||||||||| || ||||||  |||||||||| |||||| ||| ||||||||||||||   |  |  |||||||||||||||    
T  1657514 tgttttgtttaggtatttgttcgattcagatagtcagattagcttcgatccagtgcaaatcaaatcaatgactttggagtcgtcaacgttgcagatccgg 1657415  T
Q  429 agacataggtgttccagatacttgaatataatcatatgtgtagg 472  Q
    |||||| ||| ||||||| |||| |||||| |||||||||||||    
T  1657414 agacatgggtattccagagacttaaatatagtcatatgtgtagg 1657371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 285 - 491
Target Start/End: Original strand, 41486696 - 41486903
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  ||||||||||||  |||||||||| |||| |||||   |||| |||||| ||| |||| ||||||| |  |||||||||  ||||    
T  41486696 atgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcagctatttgatcggttcagattgtcaaattagcttcgatacagtg 41486795  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    || |||||||||||||||||| | |  | ||||||||||||| |||||||| | | |||| || |  | ||| || |||||||||||||| ||||||| |    
T  41486796 caaatccaatcaatgactttggcgtcatccacgttgcagatctggagacatggttattccggagatctaaatctagtcatatgtgtaggcatttgtactt 41486895  T
Q  484 tgtcgttt 491  Q
    ||||||||    
T  41486896 tgtcgttt 41486903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 495
Target Start/End: Original strand, 20961622 - 20961780
Alignment:
Q  338 tcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacatag 436  Q
    ||||||||||| ||| |||| ||||||||| || |||||||| ||||||||| ||||||||||||||||| |  | |||||||||||| |||| ||||      
T  20961622 tcaggtatttgatcgcttcagattgtcagatcaacttcgatccagtgcagattcaatcaatgactttgacgtcatccacgttgcagatacggaaacatga 20961721  T
Q  437 gtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     | |||| || | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  20961722 ttattccggagatttaaatatattcatatgtgtaggcatttgtactttgccgttttatg 20961780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 432
Target Start/End: Complemental strand, 7242747 - 7242614
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||||||  |||||||||||||| | |||  |||| ||||||||||| |||| |||||||||||| ||| |||||||  |||||||||| ||||    
T  7242747 tcgtctttgtgcgaagttgtttgtctttcttatttcgttcaagtatttgttcggttcagattgtcagaccaactttgatctaggccagatccaataaatg 7242648  T
Q  399 actttgacatttttcacgttgcagatccggagac 432  Q
    |||||| | |  | ||||||||||||||||||||    
T  7242647 actttggcgtcgtccacgttgcagatccggagac 7242614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 434
Target Start/End: Original strand, 12519779 - 12519927
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||| ||||||||  |||| ||||||||| ||| |  |||||||||||||| | ||||| |||||||| || |||||||||||||||    
T  12519779 gttggtttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattgtcagatcaacttcgatctagtgca 12519878  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||||||||| ||  | |  | || |||||||||||||||||||    
T  12519879 gatccaatcaatgacattagcgtcgtccatgttgcagatccggagacat 12519927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 495
Target Start/End: Complemental strand, 34115594 - 34115438
Alignment:
Q  340 aggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggt 438  Q
    ||||||||| ||| |||| ||||||||| ||||||| ||| |||| ||||||||||||||| |||| | |  |  ||||||||||||||||||||| | |    
T  34115594 aggtatttgatcggttcagattgtcagatcagcttcaatccagtgtagatccaatcaatgattttggcgtcatcaacgttgcagatccggagacatggtt 34115495  T
Q  439 gttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     |||| || | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  34115494 attccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 34115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 403
Target Start/End: Complemental strand, 1645531 - 1645429
Alignment:
Q  302 gtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgcagatccaatcaatgac 400  Q
    ||||||||||||||||||||||||||| |||||  ||||| |||||||| | ||| |||||||||| ||| ||| |||||| |||||| |||||||||||    
T  1645531 gtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgtttggttcaaattgtcagatcagtttcaatctagggcagattcaatcaatgac 1645432  T
Q  401 ttt 403  Q
    |||    
T  1645431 ttt 1645429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 40859810 - 40859896
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    ||||||||||||| ||||||||||||||| |||||| ||| |||||||||||| |||| ||||||||| ||||||||||| ||||||    
T  40859810 tcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatcagcttcgatccagtgca 40859896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 495
Target Start/End: Complemental strand, 33020911 - 33020709
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| ||||||||||||||||||||||||||||  |   || || |||| | ||||||||||| ||||||||| ||| ||||||| |||||| ||||    
T  33020911 tttgtttgtcgtctttgtgcggcgttgtttgtcttt--tcccttgttgaggtgtctgttcgattcagattgtcagatcagtttcgatccagtgcaaatcc 33020814  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    || ||||||||||| | |  |  |||||| |||| |||||||||   | |||| || | || |||||| |||||| ||||||||| ||||| ||||| ||    
T  33020813 aaccaatgactttggcgtcatcaacgttgtagattcggagacatgattattccggagattttaatatagtcatatttgtaggcttatgtactttgtcatt 33020714  T
Q  491 ttatg 495  Q
    |||||    
T  33020713 ttatg 33020709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 404
Target Start/End: Complemental strand, 6789863 - 6789749
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatc 389  Q
    |||||||  ||||||||||||| | ||||||||||||| |||||  || |||||||||||| ||||| | ||||||| |||||||||||    |||||||    
T  6789863 gtttgttcgtcgtctttgtgcgccattgtttgtctttcttgtttcgttaaggtatttgttcaattcagaatgtcagatcagcttcgatcctacgcagatc 6789764  T
Q  390 caatcaatgactttg 404  Q
    |||||||||||||||    
T  6789763 caatcaatgactttg 6789749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 30416584 - 30416466
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||| ||| |||||||| |||||  |||||| ||  |||||||||||| |||| ||||||||| |||||| |||| ||||||    
T  30416584 gttgttttgttcgtcgtctttgcgcgacgttgtttctcttttttgttttgtttgggtatttgttcggttcagattgtcagatcagctttgatccagtgca 30416485  T
Q  386 gatccaatcaatgactttg 404  Q
    |||| ||||||||||||||    
T  30416484 gatcaaatcaatgactttg 30416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 495
Target Start/End: Complemental strand, 4622693 - 4622485
Alignment:
Q  294 tgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaa 392  Q
    ||||| ||||||||||| |||| |||||||||||| ||||||  ||||||||| ||||| |||| ||||||| |   | ||||||| | |||| || |||    
T  4622693 tgtttgtcgtctttgtgtggcgctgtttgtctttcttgttttgctcaggtattggttcggttcagattgtcatattggtttcgatccaatgcaaattcaa 4622594  T
Q  393 tcaatgactttgacatttttcacgttgcagatccggagacata------ggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    |||| ||||||||  |  | |||||||| ||||| ||||||||      ||| ||||||| |||| |||||| |||| ||||||||| || |||| ||||    
T  4622593 tcaacgactttgatgtcctccacgttgctgatccagagacatagacatgggtattccagagactttaatatagtcatgtgtgtaggcgttcgtactttgt 4622494  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  4622493 cgttttatg 4622485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 35658521 - 35658313
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| |||||||| |||||||||||| ||||||||||||||  | |||| ||| ||| |||||||  || | ||||||||| ||| || |||| ||||||    
T  35658521 gttgttttgtttaccgtctttgtgcgacgttgtttgtcttttctcttttgttc-ggtgtttgttcagtttagattgtcagatcagttttgatcaagtgca 35658423  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||| ||| ||||||||||||| |  |  ||||||||||||||||| |||   | ||||||| | || |||||| |||||| ||||  ||| ||||| |||    
T  35658422 gattcaaccaatgactttgacgtcatcaacgttgcagatccggaggcatgtctattccagagattttaatatagtcatatttgtaaacttatgtactttg 35658323  T
Q  486 tcgttttatg 495  Q
    | ||||||||    
T  35658322 ttgttttatg 35658313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 457
Target Start/End: Complemental strand, 46386747 - 46386594
Alignment:
Q  305 tttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatgacttt 403  Q
    |||||||| | |||||||| |||| |||||  || ||||||||||||  ||||| |||||| | || |||||||||||||| ||||||||||||||||||    
T  46386747 tttgtgcgtcattgtttgtttttcttgtttcgtttaggtatttgttctgttcaaattgtcatatcaacttcgatctagtgctgatccaatcaatgacttt 46386648  T
Q  404 gacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat 457  Q
    | | || |  ||||||||||||| || ||||| || ||| ||| ||||| ||||    
T  46386647 ggcgttgtcaacgttgcagatccagatacataagtattctagagacttgtatat 46386594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 495
Target Start/End: Original strand, 31311647 - 31311802
Alignment:
Q  343 tatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgtt 441  Q
    |||||||||| |||| ||||||  | || ||| |||| ||| |||||| ||| |||||||||| | |  | ||||||||||||||||||||||| || ||    
T  31311647 tatttgttcggttcagattgtcctatcaactttgatccagtacagatcaaattaatgactttgtcgtcatccacgttgcagatccggagacatatgtatt 31311746  T
Q  442 ccagatacttgaatataa--tcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     | || |||||||||||   |||| ||||||||||||||||| |||||||||||||    
T  31311747 tcggagacttgaatatatagtcatgtgtgtaggcttttgtactttgtcgttttatg 31311802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 477
Target Start/End: Complemental strand, 38170145 - 38169960
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| |||||||  | || ||||||||||||||| |||||  ||||||||||| |||  |||| ||||||| | || ||| |||||||||| |||||    
T  38170145 tttgtttgtcgtcttcttacgacgttgtttgtctttcttgtttg-ttcaggtatttattccgttcagattgtcatatcaactttgatctagtgctgatcc 38170047  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggctttt 477  Q
    |||||||||||||| | |  |  |||||||| |||| ||  |||  || |||| || ||||||||||| ||||| ||||||||||||    
T  38170046 aatcaatgactttggcgtcatcaacgttgcaaatcctgatgcatgagtattccggagacttgaatatagtcatacgtgtaggctttt 38169960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 495
Target Start/End: Original strand, 9549594 - 9549771
Alignment:
Q  318 gtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgt 417  Q
    ||||||||||| |||||   | ||||||||| |||  || ||||||| | ||| ||||||||||| |||||||||||||| ||||||| ||  |||||||    
T  9549594 gtttgtctttcttgtttctctaaggtatttgatcggctcgattgtcatatcagtttcgatctagtacagatccaatcaattactttgaaatcattcacgt 9549693  T
Q  418 tgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||  |||||||   | |||  || | || |||||| |||||||| ||| | ||||||| ||| |||||||||    
T  9549694 tgcagatcaagagacatgattattctggagatttaaatatagtcatatgtatagacatttgtactttgccgttttatg 9549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 435
Target Start/End: Complemental strand, 9781780 - 9781649
Alignment:
Q  305 tttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctag-tgcagatccaatcaatgactt 402  Q
    |||||| | ||||||||||||||  |||||| |||||||||||||||| |||| ||||||| |  |||||||||| || || |||| |||| | ||||||    
T  9781780 tttgtgggtcgttgtttgtctttt-tgttttgttcaggtatttgttcggttcagattgtcatattagcttcgatccaggtgtagatacaattattgactt 9781682  T
Q  403 tgacatttttcacgttgcagatccggagacata 435  Q
    |||  ||||| |||||||||||| |||||||||    
T  9781681 tgaagtttttaacgttgcagatctggagacata 9781649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 494
Target Start/End: Original strand, 11817255 - 11817387
Alignment:
Q  362 tcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatc 461  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||| |  |  ||||||||||||||||  |||   | |||| || | || |||||| ||    
T  11817255 tcagatcagcttcgatctagtacagatccaaccaatgactttgacgtcgtcaacgttgcagatccggaagcatgactattccggagattttaatatagtc 11817354  T
Q  462 atatgtgtaggcttttgtaccttgtcgttttat 494  Q
    |||| ||||||||| ||||| ||| ||||||||    
T  11817355 atatatgtaggcttatgtactttgccgttttat 11817387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 6408579 - 6408777
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctag-tgcagatccaatcaat 397  Q
    ||||||||||||| | ||||||||||| | |||||  || ||||| ||||||  ||||| |||||| | |||||||||||||| || ||||| |||||||    
T  6408579 tcgtctttgtgcgacattgtttgtcttacttgtttcgtttaggtaattgttcagttcaaattgtcaaatcagcttcgatctaggtgtagatcaaatcaat 6408678  T
Q  398 gactttgacatttttca-cgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    || ||||  | || ||| |||| ||| || ||| |||| ||| |||| || |||| |||||| |||| |||||||||||| |||| |||  ||||||||    
T  6408679 gagtttgggagttgtcaacgtttcaggtctggaaacatgggtattccggagacttaaatatagtcatctgtgtaggctttggtactttgctgttttatg 6408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 491
Target Start/End: Original strand, 23926164 - 23926369
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||| |||||||  ||||||||||| |||||| ||||| ||    | || ||||||| |||||||| ||||| || ||| | ||||||||||  | ||||    
T  23926164 gttgttttgtttgccgtctttgtgcagcgttgcttgtcgtttccctcttgttcaggtgtttgttcggttcaaattctcatatcagcttcgattaaatgca 23926263  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||| ||||||||||| |||  |  ||||||||||||| |||||||   | |||| || | || |||||| |||||| ||||||||| ||||| |||    
T  23926264 gatccaaccaatgactttggcatcatcaacgttgcagatccagagacatgactattccggagattttaatatagtcatatttgtaggcttatgtactttg 23926363  T
Q  486 tcgttt 491  Q
     |||||    
T  23926364 ccgttt 23926369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 44021500 - 44021424
Alignment:
Q  358 attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||| || ||| |||  |||||||||||||| |||||||||||| |  | ||||||||||||||||||||||    
T  44021500 attgtcagaacaactttgattcagtgcagatccaattaatgactttgacgtcgtccacgttgcagatccggagacat 44021424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 434
Target Start/End: Original strand, 5388651 - 5388786
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||||||| |||||||||||||    | || || |||| |||||| || ||| ||||||||| ||| ||||||| |||||| ||| || |||||    
T  5388651 tcgtctttgtgcggtgttgtttgtcttttccctcttgtttaggtgtttgtttgaatcagattgtcagatcagattcgatccagtgcaaatcgaaccaatg 5388750  T
Q  399 actttgacatttttcacgttgcagatccggagacat 434  Q
    |||||||| |  |  |||||| ||||||||||||||    
T  5388751 actttgacgtcatcaacgttgtagatccggagacat 5388786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 23963952 - 23964006
Alignment:
Q  441 tccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| ||||||||| |||||||| ||||| ||||||||| |||||||||||||    
T  23963952 tccagagacttgaatacaatcatatttgtagacttttgtactttgtcgttttatg 23964006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 473
Target Start/End: Original strand, 22621648 - 22621741
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggc 473  Q
    |||||| ||| |||||| ||||||||| |  |  |||||||||||||  | |||||||| ||| ||||||||||| |||||||||| |||||||    
T  22621648 agtgcaaatctaatcaaagactttgacgtcgtcaacgttgcagatccaaatacataggtattcaagatacttgaacataatcatatttgtaggc 22621741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 495
Target Start/End: Complemental strand, 44375166 - 44375057
Alignment:
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | |||||||||||||||||||||| | | | || || | |  |||||| |||||||||||||| ||| |||||||    
T  44375166 gatccaatcaatgactttggcgtcatacacgttgcagatccggagacatggttatcccggagattaaaatatagtcatatgtgtaggcatttctaccttg 44375067  T
Q  486 tcgttttatg 495  Q
     | |||||||    
T  44375066 ccattttatg 44375057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 494
Target Start/End: Complemental strand, 7242615 - 7242569
Alignment:
Q  448 acttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||||    
T  7242615 acttgaatatagtcagatgtgtaggcttttgtattttgtcgttttat 7242569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 403
Target Start/End: Original strand, 35338533 - 35338630
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgactt 402  Q
    |||||||||||||||  ||||||||| |||||| ||||| |||||||||| |||   ||||||| || |||||||| | || |||  |||| ||||||||    
T  35338533 tctttgtgcggcgttacttgtctttcttgttttgttcagatatttgttcggttc---tgtcagatcaacttcgatccaatgtagactcaattaatgactt 35338629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 6082294 - 6082213
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||| ||||  || |||  || ||||||||||| |||||| ||||||| | ||||| ||| |||||||||    
T  6082294 acgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatg 6082213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 496
Target Start/End: Complemental strand, 24398654 - 24398609
Alignment:
Q  451 tgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||||||||||||||| ||||||||| ||||  ||||||||||||||    
T  24398654 tgaatataatcatatttgtaggcttatgtattttgtcgttttatgt 24398609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 5e-48; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 7640347 - 7640138
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  7640347 gttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 7640248  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| |||||||||||||| |||||||||||    
T  7640247 gatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtaggcatttgtaccttg 7640148  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  7640147 ccgttttatg 7640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 287 - 494
Target Start/End: Original strand, 26491425 - 26491632
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||| | |||||||||| |||| |||||  ||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  26491425 gttgttttgtttttcgtctttgtgtgacgttgtttgtgtttcttgtttcgttcag-tatttgttcgattcagattgtcagatcagcttcgatctagtgca 26491523  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| ||||||||||||||   |  |  ||||||||||||||||||||| ||  |||| || |||| |||||| ||||||||||||||||| |||| |||    
T  26491524 gatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggcattccggagacttaaatatagtcatatgtgtaggctttagtactttg 26491623  T
Q  486 tcgttttat 494  Q
    |||| ||||    
T  26491624 tcgtgttat 26491632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 43929291 - 43929082
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||| ||| ||| ||||||| ||||||    
T  43929291 gttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctatcaggtatttgatcggttcagattgttagatcagtttcgatcaagtgca 43929192  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||| ||||||||||||||| | |  | ||||||||||||||||||||||   | |||| || | || |||||| |||||||||||||| |||||||||||    
T  43929191 gattcaatcaatgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgtgtaggcatttgtaccttg 43929092  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  43929091 ccgttttatg 43929082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 19580980 - 19580784
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||  |||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||| ||||||||    
T  19580980 tcgtctttgtgcgacgttgtttgttttttttgttttgttcaggtatttgttcgattcagattgtcagatcagcttcgatccagtgcatatcaaatcaatg 19580881  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   || |  ||||||||||||||||||||| | | |||| || |||| ||||||||||||| ||||| |||| |||| |||  ||||||||    
T  19580880 actttggagttgtcaacgttgcagatccggagacatggatattccggagacttaaatataatcatatctgtagactttagtactttgcagttttatg 19580784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 44167689 - 44167493
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   |||| |||||| ||| ||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  44167689 tcgtctttgtgcgacgttgtttgtttttcttgtttcgctcagctatttgatcgcttcaaattgtcagatcagcttcaatccagtgcagatccaatcaatg 44167590  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||| |  | ||||||||||||||||| |||| | | ||||||| | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  44167589 actttgacgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 44167493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 302 - 495
Target Start/End: Original strand, 36508067 - 36508261
Alignment:
Q  302 gtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgac 400  Q
    ||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  36508067 gtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgac 36508166  T
Q  401 tttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||| | |  | ||||||||||||||||| |||| | | ||||||| | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  36508167 tttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 36508261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 287 - 481
Target Start/End: Complemental strand, 7443557 - 7443362
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||| ||||||||||||||| |||||| ||| |||||||||||| |||| ||||| ||| ||||||| ||| ||||||    
T  7443557 gttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtaagatcagcttcaatccagtgca 7443458  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    |||| ||||||||||||||   |  |  |||||||||||||||||| |  ||| |||| || |||| |||||||||||||||||||||||| ||||    
T  7443457 gatcaaatcaatgactttggagtcatcaacgttgcagatccggagataagggtattccggaaacttaaatataatcatatgtgtaggctttagtac 7443362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 496
Target Start/End: Complemental strand, 9715535 - 9715325
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| || |||||||||||| ||||||||||||| |||||  |||||||||||||| | ||||| |||||| | ||| ||| ||| ||||||    
T  9715535 gttgatttgtttgtcatctttgtgcggcattgtttgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcatatcagattcaatccagtgca 9715436  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     |||||||||||||||||| | || | ||||||| | |||| ||||||||| | ||||  | ||||||||||| ||| | |||||||||||||||| |||    
T  9715435 tatccaatcaatgactttggcgttctccacgttgtaaatccagagacatagatattccgcagacttgaatatagtcaaacgtgtaggcttttgtactttg 9715336  T
Q  486 tcgttttatgt 496  Q
    ||||| |||||    
T  9715335 tcgttatatgt 9715325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 25623023 - 25622826
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcat-gttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaat 397  Q
    ||||||||||||||||||||||||||||| | |||||| |||||||||| |||| |||| ||||||| | |||||| |||  ||||||||| ||||||||    
T  25623023 tcgtctttgtgcggcgttgtttgtctttccttgttttactcaggtattttttcggttcagattgtcatatcagcttagattcagtgcagattcaatcaat 25622924  T
Q  398 gactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||| |  |  ||||| ||||| || ||||||  || |||| || |||| |||||| |||||||||||||||||||||| ||| |||||||||    
T  25622923 gactttgacgtcgtcaacgttacagattcgaagacatgagtattccggagactttaatatagtcatatgtgtaggcttttgtactttgacgttttatg 25622826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 25516628 - 25516824
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| | |||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||| ||| |||||||||||||||||||    
T  25516628 tcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcaatccagtgcagatccaatcaatg 25516727  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  25516728 actttggcgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 25516824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 43567009 - 43567205
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||  ||| |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  43567009 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 43567108  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  43567109 actttggtgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 43567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 285 - 495
Target Start/End: Original strand, 5930544 - 5930755
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  |||| |||||||| |||||||||| |||| |||||   ||| ||||||| ||| |||| ||||| ||| ||||||||||| ||||    
T  5930544 atgttggtttgttcgtcgtttttgtgcgacgttgtttgtttttcttgtttctatcatgtatttgatcggttcagattgtgagatcagcttcgatccagtg 5930643  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    |||||||||||||||| ||||   || | |||||||||||||||||||||| | | |||| || | || |||||  |||||||||||||| ||||||  |    
T  5930644 cagatccaatcaatgattttggtgttatccacgttgcagatccggagacatggttattccggagatttaaatatggtcatatgtgtaggcatttgtattt 5930743  T
Q  484 tgtcgttttatg 495  Q
    ||||||||||||    
T  5930744 tgtcgttttatg 5930755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 10589218 - 10589427
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||| ||||||||||||||| |||||| ||| |||||||||||| |||| | ||||||| |||||| |||| ||||||    
T  10589218 gttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagagtgtcagatcagctttgatccagtgca 10589317  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| ||||||||||||||   |  |  ||||||||||||||||||||  ||| ||||  | |||| |||||| |||||||| ||||||||  ||| |||    
T  10589318 gatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccgaagacttaaatatagtcatatgtataggctttaatactttg 10589417  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  10589418 ccgttttatg 10589427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 37883776 - 37883985
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  |||||||||||||  |||||||||||||| |||||  || | |||||||||||||||| ||||||| | |||||| |||| | ||||    
T  37883776 gttgttttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgttgacgtatttgttcgattcagattgtcatatcagctttgatccaatgca 37883875  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| ||||||||||||||   |  |  ||||||||||| |||||||||  || ||| |||||||| |||||| ||||||||||||||||| |||| |||    
T  37883876 gatcaaatcaatgactttggagtcgtcaacgttgcagatacggagacatgagtattctagatacttaaatatagtcatatgtgtaggctttagtactttg 37883975  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  37883976 ccgttttatg 37883985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 17118804 - 17118596
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcag 386  Q
    |||| ||||||  |||||||||||||| |||||||||||||  |||||  ||  ||||||| |||  ||  ||||||||| ||||||| |||||||||||    
T  17118804 gttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttagattgtcagatcagcttcaatctagtgcag 17118705  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    ||| || |||||| |||||| || |  |||||||| || || |||||| ||| || ||||  |||||||||| |||||||||||||| ||||||| ||||    
T  17118704 atcaaaacaatgattttgacgttgtcaacgttgcatattcgtagacatgggtatttcagaagcttgaatatagtcatatgtgtaggcgtttgtactttgt 17118605  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  17118604 cgttttatg 17118596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 288 - 495
Target Start/End: Complemental strand, 27024129 - 27023921
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| || ||||| ||||||||| ||||||||||| |||||||    
T  27024129 ttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcaattcagattgtcagatcagcttcgatccagtgcag 27024030  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    ||||||||||||||||||   |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||| |||  |||||| |||     
T  27024029 atccaatcaatgactttggagtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtgggcaattgtactttgc 27023930  T
Q  487 cgttttatg 495  Q
    | |||||||    
T  27023929 cattttatg 27023921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 41176994 - 41177190
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||| ||||||| ||| ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  41176994 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcaaattgtcagatcagcttcgatccagtgcagatccaatcaatg 41177093  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | |||||||||||| || | |||| | | |||| || | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  41177094 actttggcgtcatccacgttgcagattcgaaaacatggttattccggagatttaaatatattcatatgtgtaggcatttgtactttgccgttttatg 41177190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 285 - 495
Target Start/End: Original strand, 28228343 - 28228554
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  |  |||||||||||  ||||||||||||| |||||  |||| ||||||||||| |||| ||||||| | |||||| |||| | ||    
T  28228343 atgttggtttgttcgttatctttgtgcggttttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcatatcagctttgatccaatg 28228442  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    ||||||||||||||||||||| | |    ||||||| ||||||| ||||||  || || ||||  |||||||||| |||||||||||||||||| ||| |    
T  28228443 cagatccaatcaatgactttggcgtcgcccacgttgtagatccgaagacatgagtatttcagaggcttgaatatagtcatatgtgtaggcttttttactt 28228542  T
Q  484 tgtcgttttatg 495  Q
    |||||| |||||    
T  28228543 tgtcgtattatg 28228554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 300 - 496
Target Start/End: Original strand, 38822208 - 38822405
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| |||| ||||   ||||||||| |||||||||||||||||||    
T  38822208 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgccagatttgcttcgatccagtgcagatccaatcaatg 38822307  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |||||||| |  | || |||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| ||||||| ||| ||||| ||||    
T  38822308 actttgacgtcatccatgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgtttcatgt 38822405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 3465065 - 3465261
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||| ||||||| ||| |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  3465065 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 3465164  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | |||| | |  | |||||||||||||| || |||| | | || | || | || |||||| |||||||||||| | ||||||| |||||||||||||    
T  3465165 attttggcgtcatccacgttgcagatccagaaacatggttatttcggagatttaaatatagtcatatgtgtagacatttgtactttgtcgttttatg 3465261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 15673946 - 15673750
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||||||||| |||||  ||||||| ||||||||||||| ||||||| | ||||||||||| |||  ||||| ||||||||    
T  15673946 tcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtttttgttcgattcagattgtcatatcagcttcgatccagtatagatcaaatcaatg 15673847  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   |  |  | |||||||||| |||||||| | | |||| || |||| |||||| ||||||||||||||||| |||  ||| |||||||||    
T  15673846 actttggagtcgtcaatgttgcagatctggagacatggatattccggagacttaaatatagtcatatgtgtaggctttagtattttgccgttttatg 15673750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 17068906 - 17068698
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcag 386  Q
    |||| ||||||  |||||||||||||| |||||||||||||  |||||  ||  ||||||| |||  || |||||| ||| ||||||| ||| |||||||    
T  17068906 gttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttaaattgttagatcagcttcaatccagtgcag 17068807  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    ||| || |||||| |||||| |  |  |||||||| ||||| |||||| ||| || ||||  |||||||||| |||||||||||| ||||||||| |||     
T  17068806 atcaaaacaatgattttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaatatagtcatatgtgtagacttttgtactttgc 17068707  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  17068706 cgttttatg 17068698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 287 - 480
Target Start/End: Complemental strand, 5071361 - 5071167
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||||| | ||||||||||||  | | || ||||||| |||||||| |||| ||||||||| || ||||||||||||| |    
T  5071361 gttgttttgtttgtcgtctttgtgcgactttgtttgtcttttctctcttgttcaggtgtttgttcggttcagattgtcagatcaacttcgatctagtgta 5071262  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgta 480  Q
    ||||||| | ||||||||| | |  |  ||||||||||||||||| ||| | | |||| |||| || |||||| |||||| ||||||||| ||||    
T  5071261 gatccaaccgatgactttggcgtcatcaacgttgcagatccggaggcatggctattccggatattttaatatagtcatatttgtaggcttatgta 5071167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 285 - 481
Target Start/End: Complemental strand, 4878729 - 4878532
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||| ||||||  ||||||||||||| ||||||||||||||| || ||  || ||||||||||||| |||| ||||||| | ||||||||||| ||||    
T  4878729 atgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcagcttcgatccagtg 4878630  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    |||||| ||||||||||||||   |  |  | |||||||||  ||||||||  || |||| |  |||| |||||| ||||||||||||||||| ||||    
T  4878629 cagatcaaatcaatgactttggactcatcaatgttgcagatatggagacatcagtattccggtgacttaaatatagtcatatgtgtaggctttagtac 4878532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 13268695 - 13268904
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||| ||||||||||||||   ||||  |  |||||||| ||||||||| ||||||||| || ||| |||| | ||||    
T  13268695 gttgttttgttcgtcgtctttgtgcgacgttgtttgtctttttcgtttcgtctaggtatttattcgattcagattgtcagatcaactttgatccaatgca 13268794  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     |||||||||| ||||||| | | ||  |||||| |||||||| |||||  || ||||||| ||||||||||| ||| ||||||| |||||||||| |||    
T  13268795 tatccaatcaacgactttggcgtcttcaacgttgaagatccggggacatgagtattccagagacttgaatatagtcacatgtgtaagcttttgtactttg 13268894  T
Q  486 tcgttttatg 495  Q
      ||||||||    
T  13268895 ctgttttatg 13268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 302 - 495
Target Start/End: Complemental strand, 17056444 - 17056251
Alignment:
Q  302 gtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    |||||||||||| |||||||||||||  |||||  ||  ||||||| |||  || |||||| ||| ||||||| ||| |||||||||| || |||||| |    
T  17056444 gtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttaaattgttagatcagcttcaatccagtgcagatcaaaacaatgatt 17056345  T
Q  402 ttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||| |  |  |||||||| ||||| |||||| ||| || ||||  |||||||||| |||||||||||| ||||||||| ||| |||||||||    
T  17056344 ttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaatatagtcatatgtgtagacttttgtactttgccgttttatg 17056251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 25771568 - 25771777
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||| ||| ||||||||||| |||| |    
T  25771568 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatcagcttcgatccagtgta 25771667  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||| |||| | |  | ||||||||||||| ||| |||| | | |||| || | || |||||| |||||||||||| |  |||||| |||    
T  25771668 gatccaatcaatgattttggcgtcatccacgttgcagatctggatacatggttattccggagatttaaatatagtcatatgtgtagacaattgtactttg 25771767  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  25771768 ccgttttatg 25771777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 44951542 - 44951659
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||||||||| || |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  44951542 gttggtttgttcgtcgtctttgtacgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 44951641  T
Q  386 gatccaatcaatgacttt 403  Q
    ||||||||||||||||||    
T  44951642 gatccaatcaatgacttt 44951659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 403
Target Start/End: Original strand, 24500623 - 24500727
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||||||||| |||||| |||| ||||||||||| |||| ||| ||||| ||||||||||| |||||||||| ||| ||||    
T  24500623 tcgtctttgtgcgacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagattatcagatcagcttcgatccagtgcagatcaaatgaatg 24500722  T
Q  399 acttt 403  Q
    |||||    
T  24500723 acttt 24500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 293 - 495
Target Start/End: Original strand, 6090019 - 6090221
Alignment:
Q  293 ttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcca 391  Q
    ||||| ||| |||||||||| |||||||||| |||| |||||   |||| |||||| ||| |||| ||||||||| ||||||||||| |||||| |||||    
T  6090019 ttgttcatcttctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcgcttcagattgtcagatcagcttcgatccagtgcatatcca 6090118  T
Q  392 atcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttt 491  Q
    ||||||||||||    |  | ||||||||||||||||| |||| | | ||||||| | || |||||| |||| |||||| || ||||||| ||| |||||    
T  6090119 atcaatgactttagtgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcat-tgtgtatgcatttgtactttgccgttt 6090217  T
Q  492 tatg 495  Q
    ||||    
T  6090218 tatg 6090221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 456
Target Start/End: Complemental strand, 11550587 - 11550416
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| |||||||||||||||||| |||||||||| |||||  |||| ||||||||||| |||| ||||||||| || ||| |||| |||| |    
T  11550587 gttgttttgtttgtcgtctttgtgcggcgttttttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcagaacaacttagatccagtgta 11550488  T
Q  386 gatcc-aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaata 456  Q
    ||||| |||||||||||||| | |  |  |||||||||||||| |||||| ||| || |||| |||| ||||    
T  11550487 gatccaaatcaatgactttggcgtcgtcaacgttgcagatccgaagacatgggtattacagagactttaata 11550416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 300 - 434
Target Start/End: Complemental strand, 27191315 - 27191180
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  27191315 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgtagatccaatcaatg 27191216  T
Q  399 actttgacatttttcacgttgcagatccggagacat 434  Q
    |||||| | |  | ||||||||||||| ||| ||||    
T  27191215 actttggcgtcatccacgttgcagatctggaaacat 27191180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 300 - 434
Target Start/End: Complemental strand, 27841129 - 27840994
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  27841129 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgtagatccaatcaatg 27841030  T
Q  399 actttgacatttttcacgttgcagatccggagacat 434  Q
    |||||| | |  | ||||||||||||| ||| ||||    
T  27841029 actttggcgtcatccacgttgcagatctggaaacat 27840994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 406
Target Start/End: Original strand, 19953699 - 19953812
Alignment:
Q  293 ttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcca 391  Q
    |||||| ||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||||||||| || |||  ||| | ||||||| ||    
T  19953699 ttgtttgtcgtctttgtgcggcgttgtttgtctttcttgttttgttcaagtatttgttcggttcagattgtcagatcatcttaaatccaatgcagat-ca 19953797  T
Q  392 atcaatgactttgac 406  Q
    |||||||||||||||    
T  19953798 atcaatgactttgac 19953812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 495
Target Start/End: Original strand, 20036532 - 20036714
Alignment:
Q  314 cgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacattttt 412  Q
    ||||||||||||||| |||||  |||||||||||||||  |||| |||||||||   ||||||||| ||||||||||||||||||||||||| |    |     
T  20036532 cgttgtttgtctttcttgtttcgttcaggtatttgttcagttcagattgtcagattggcttcgatccagtgcagatccaatcaatgactttggcgccgtc 20036631  T
Q  413 cacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     |||||||||||||| |||||| ||| ||||  | ||||| ||||| ||  |||||||||||| ||||| ||  |||||||||    
T  20036632 aacgttgcagatccgaagacatgggtattccgtagacttggatatagtctaatgtgtaggcttctgtactttaccgttttatg 20036714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 291 - 495
Target Start/End: Complemental strand, 16720835 - 16720630
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatc 389  Q
    |||||||  ||||||||||| | |||||||||| |||| ||||   |||||||||||||||| |||| ||| ||| | |||||| ||||| |||||||||    
T  16720835 gtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgttactttcaggtatttgttcggttcagattatcaaatcagctttgatctcgtgcagatc 16720736  T
Q  390 caatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgt 489  Q
    ||||||| || |||| | |  | |||||||||||||| || ||||   | |||  || |||| |||||| |||||||||||||| ||||||| ||||| |    
T  16720735 caatcaacgattttggcttcatccacgttgcagatccagatacatgattattctggagacttaaatatagtcatatgtgtaggcatttgtactttgtcat 16720636  T
Q  490 tttatg 495  Q
    ||||||    
T  16720635 tttatg 16720630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 371 - 495
Target Start/End: Original strand, 3603193 - 3603317
Alignment:
Q  371 cttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgta 470  Q
    |||||||| ||||||||||||||||||||||||||| |  | || |||||||||||| |||||| | | |||| || | || |||||| |||||||||||    
T  3603193 cttcgatccagtgcagatccaatcaatgactttgacgtcatccatgttgcagatccgaagacatggttattccggagatttaaatatagtcatatgtgta 3603292  T
Q  471 ggcttttgtaccttgtcgttttatg 495  Q
    ||| ||||||| ||| |||||||||    
T  3603293 ggcatttgtactttgccgttttatg 3603317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 495
Target Start/End: Complemental strand, 2251331 - 2251129
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| ||||||||||||| ||||||||||||||  |   || || |||| ||||||| ||||| ||||||||| ||||||||||| |||||| ||||    
T  2251331 tttgtttgtcgtctttgtgcgacgttgtttgtcttt--tcccttgttgaggtgtttgttcaattcagattgtcagatcagcttcgatccagtgcaaatcc 2251234  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    || ||||||||||| | |  |  |||||||||||||| || ||| | | |||| || | || |||||| |||||| ||||||||| ||||| |||  |||    
T  2251233 aaccaatgactttggcgtcatcaacgttgcagatccgaaggcatggttattccggagattttaatatagtcatatttgtaggcttatgtactttgcagtt 2251134  T
Q  491 ttatg 495  Q
    |||||    
T  2251133 ttatg 2251129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 491
Target Start/End: Complemental strand, 17074890 - 17074699
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatga 399  Q
    |||||||||||||| |||||||||||||  |||||  ||  ||||||| |||  || |||||| ||| ||||||| ||| |||||||||| || ||||||    
T  17074890 tcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttaaattgttagatcagcttcaatccagtgcagatcaaaacaatga 17074791  T
Q  400 ctttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttt 491  Q
     |||||| |  |  |||||||| ||| | |||||| ||| |  ||||  |||||||||| |||||||||||| ||||||||| ||| |||||    
T  17074790 ttttgacgtcgtcgacgttgcatatctgtagacatgggtatatcagaagcttgaatatagtcatatgtgtagacttttgtactttgccgttt 17074699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 446
Target Start/End: Complemental strand, 29812593 - 29812446
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||||||| ||||||| |||||| ||||| |||||||||| |||||| |||  ||||| | | ||| || |||| |||||||||||||||||||    
T  29812593 tcgtctttgtgcggtgttgtttttctttcttgtttcattcaggtatgtgttcggttcggattgttatatcagtttagatccagtgcagatccaatcaatg 29812494  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccaga 446  Q
    | ||||  ||  |  |||||||||||||| |||||| ||| |||||||    
T  29812493 attttggaatcgtcaacgttgcagatccgaagacatgggtattccaga 29812446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 494
Target Start/End: Original strand, 34480173 - 34480296
Alignment:
Q  372 ttcgatctagtgcagatccaatc-aatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgta 470  Q
    ||||||| |||| ||||||| || |||||||||| | |  | ||||||||||||||||||||||  || |||| |  ||||||||||| |||||||||||    
T  34480173 ttcgatcaagtggagatccagtcgaatgactttggcgtcatccacgttgcagatccggagacatgagtattccggcgacttgaatatagtcatatgtgta 34480272  T
Q  471 ggcttttgtaccttgtcgttttat 494  Q
    || |||||||| ||||||||||||    
T  34480273 ggtttttgtactttgtcgttttat 34480296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 495
Target Start/End: Original strand, 3390597 - 3390755
Alignment:
Q  338 tcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacatag 436  Q
    ||||||||||| ||  |||| |||||||||  |||||||||| ||||||||||||||||||||||||| | |  | ||||||||||||||||| |||| |    
T  3390597 tcaggtatttgatcagttcagattgtcagataagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacatgg 3390696  T
Q  437 gtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     | |||| || | || ||||||   ||||||||||||  |||||| ||| |||||||||    
T  3390697 ttattccggagatttaaatatagctatatgtgtaggcaattgtactttgccgttttatg 3390755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 29734313 - 29734431
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||| |||| || ||||||||||| |||  ||||  |||| | |||||||||||||| ||||||||| || |||||||| ||||||    
T  29734313 gttgttttgtttgtcgtcgttgtacgacgttgtttgtccttctggtttcgttcaaggatttgttcgattcagattgtcagatcaacttcgatccagtgca 29734412  T
Q  386 gatccaatcaatgactttg 404  Q
    |||| ||||||||||||||    
T  29734413 gatcaaatcaatgactttg 29734431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 16879956 - 16879851
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| || |||||||| ||||||    
T  16879956 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcaacttcgatccagtgca 16879857  T
Q  386 gatcca 391  Q
    ||||||    
T  16879856 gatcca 16879851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 16992089 - 16991984
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| || |||||||| ||||||    
T  16992089 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcaacttcgatccagtgca 16991990  T
Q  386 gatcca 391  Q
    ||||||    
T  16991989 gatcca 16991984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 17095476 - 17095268
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcag 386  Q
    |||| ||||||  |||||||||||| | |||||||||||||  |||||  ||  ||||||| |||  ||  ||||| ||| ||||||| |||||||||||    
T  17095476 gttgttttgttcgtcgtctttgtgcagtgttgtttgtcttttttgtttcgtttgggtatttattcctttagattgttagatcagcttcaatctagtgcag 17095377  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    ||| || |||| | |||||| |  |    |||||| ||||| |||||| ||| || ||||  |||||||||| |||||||||||| ||||||||| |||     
T  17095376 atcaaaacaattattttgacgtcgtcattgttgcatatccgtagacatgggtatttcagaagcttgaatatagtcatatgtgtagacttttgtactttgc 17095277  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  17095276 cgttttatg 17095268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 337 - 495
Target Start/End: Complemental strand, 3397920 - 3397761
Alignment:
Q  337 ttcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacata 435  Q
    ||||||| ||||||| ||||| ||||||||| || |||||||| ||||||||| ||| ||||||||||| | |  |  || ||||||||||||||||||     
T  3397920 ttcaggtgtttgttcaattcagattgtcagatcatcttcgatccagtgcagattcaaccaatgactttggcgtcatcaacattgcagatccggagacatg 3397821  T
Q  436 ggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | | || | || | || |||||| |||||| |||| |||| ||||| |||||||||||||    
T  3397820 gctatttcggagattttaatatagtcatatttgtatgcttatgtactttgtcgttttatg 3397761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 337 - 467
Target Start/End: Complemental strand, 42105706 - 42105576
Alignment:
Q  337 ttcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacata 435  Q
    |||||||||||||||||||||| |||||| | ||||||||||  |||||||||| ||||||||||||||   || |  ||||||||||| || ||||||     
T  42105706 ttcaggtatttgttcgattcaaattgtcaaatcagcttcgattcagtgcagatcaaatcaatgactttggagttgtcaacgttgcagat-cgaagacatg 42105608  T
Q  436 ggtgttccagatacttgaatataatcatatgt 467  Q
    | | |||| || |||| |||||||||||||||    
T  42105607 gttattccggagacttaaatataatcatatgt 42105576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 372
Target Start/End: Original strand, 40125512 - 40125598
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagct 372  Q
    |||| ||||||| ||||||||||||| |||| |||||||||| |||||  ||||||||||| ||||||||| ||||||||| |||||    
T  40125512 gttgttttgtttttcgtctttgtgcgacgttctttgtctttcttgtttcgttcaggtatttattcgattcagattgtcagatcagct 40125598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 495
Target Start/End: Complemental strand, 18141367 - 18141263
Alignment:
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    |||||||||||||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| |||||||||||||| ||||||| ||| ||||    
T  18141367 aatcaatgactttggcgtcctccacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgtt 18141268  T
Q  491 ttatg 495  Q
    |||||    
T  18141267 ttatg 18141263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 493
Target Start/End: Original strand, 44441627 - 44441709
Alignment:
Q  411 ttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtttta 493  Q
    |||||||||||||| | ||||||| ||| |||| || ||||||||||| |||||||||| | ||||||||| ||| |||||||    
T  44441627 ttcacgttgcagattcagagacattggtattccggagacttgaatatagtcatatgtgtggacttttgtactttgccgtttta 44441709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 496
Target Start/End: Complemental strand, 25237268 - 25237112
Alignment:
Q  341 ggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtg 439  Q
    |||||||||||||||||  ||| |||| ||||||| ||| ||||||||| ||||||||||||||    |  |  |||||||| || |||||||||  ||     
T  25237268 ggtatttgttcgattcaggttgccagatcagcttcaatccagtgcagattcaatcaatgacttttgagtcgtcaacgttgcaaattcggagacatgagta 25237169  T
Q  440 ttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |||  |  |||| ||||||||||||||||||||||||| ||  ||| ||||||||||    
T  25237168 ttcgggggacttaaatataatcatatgtgtaggcttttctattttgccgttttatgt 25237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 495
Target Start/End: Original strand, 11931157 - 11931204
Alignment:
Q  448 acttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  11931157 acttgaatatagtcatatgtgtaggcttttgtactttgccgttttatg 11931204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 495
Target Start/End: Original strand, 35353813 - 35353972
Alignment:
Q  337 ttcaggtatttgttc-gattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacata 435  Q
    ||||||| ||||||| ||||  ||||||||| || |||||||| ||||||||||||| ||||||||||| | |  |  ||||||||||||||||| |||     
T  35353813 ttcaggtgtttgttcagattagattgtcagatcatcttcgatccagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatg 35353912  T
Q  436 ggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
      | || | || | || |||||| |||||| | ||||||| ||||| |||| ||||||||    
T  35353913 actatttcggagattttaatatagtcatatttataggcttatgtactttgttgttttatg 35353972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 404
Target Start/End: Complemental strand, 31125317 - 31125252
Alignment:
Q  340 aggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttg 404  Q
    |||| ||||||||||||| ||||||| | || ||||||| ||||| ||||||||||||||||||||    
T  31125317 aggtgtttgttcgattcagattgtcatatcaacttcgatttagtgtagatccaatcaatgactttg 31125252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 803021 - 802961
Alignment:
Q  345 tttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttg 404  Q
    |||||||| |||| ||||| |||||| |||||||| |||||||||| ||||||||||||||    
T  803021 tttgttcggttcagattgttagaccatcttcgatcaagtgcagatctaatcaatgactttg 802961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 17084427 - 17084323
Alignment:
Q  302 gtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    |||||||||||| |||||||||||||  |||||  ||  ||||||| |||  || |||||| ||| ||||||| ||| |||||||||| || |||||| |    
T  17084427 gtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttaaattgttagatcagcttcaatccagtgcagatcaaaacaatgatt 17084328  T
Q  402 ttgac 406  Q
    |||||    
T  17084327 ttgac 17084323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 473
Target Start/End: Original strand, 4732327 - 4732386
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggc 473  Q
    |||||||||||||||||||||  || |||| || ||||||||||| |||||| |||||||    
T  4732327 acgttgcagatccggagacatgagtattccggagacttgaatatagtcatatttgtaggc 4732386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 12366121 - 12366200
Alignment:
Q  416 gttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||  || |||| |  |||| |||||  ||||||||||||||||| |||| || ||||||||||    
T  12366121 gttgcagatccggagacatgagtattccggtgacttaaatattgtcatatgtgtaggctttagtactttttcgttttatg 12366200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 15920091 - 15920206
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    ||||||||||| ||||||||||||| | |  |  |||||||||||||||| ||||  || || |  | ||||||||||| |||||| ||||||| | |||    
T  15920091 agtgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccggaaacatgagtatttcgaagacttgaatatagtcatatttgtaggcatatgt 15920190  T
Q  480 accttgtcgttttatg 495  Q
    || ||| |||||||||    
T  15920191 actttgccgttttatg 15920206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 41842071 - 41842118
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttt 334  Q
    |||||||||||  |||||||||||| |||||||||||||||| |||||    
T  41842071 gttggtttgttcgtcgtctttgtgctgcgttgtttgtctttcttgttt 41842118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 471
Target Start/End: Complemental strand, 9689846 - 9689792
Alignment:
Q  417 ttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtag 471  Q
    ||||||||||||||||||| || ||||||| || |||||||| |||||| |||||    
T  9689846 ttgcagatccggagacataagtattccagagacatgaatatagtcatatttgtag 9689792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 405
Target Start/End: Original strand, 38105359 - 38105465
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||| ||||| ||||| ||||||||| ||| || ||||||  |||||||| ||||  |||||| |||| |||||||  |||| ||||| || |||||    
T  38105359 tcgtcttagtgcgacgttgcttgtctttcctgtcttgttcaggcgtttgttcggttcaggttgtcataccatcttcgatacagtgaagatctaaacaatg 38105458  T
Q  399 actttga 405  Q
    |||||||    
T  38105459 actttga 38105465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 34471183 - 34471268
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatat 465  Q
    ||||||||||||||||||||||||| | || |  ||||||||||||  |||||||  || |||| || || |||||||| ||||||    
T  34471183 agtgcagatccaatcaatgactttggcgttgtcaacgttgcagatctagagacatgagtattccggagacatgaatatagtcatat 34471268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 288 - 495
Target Start/End: Original strand, 21326597 - 21326805
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||  ||||||||||||| ||||||||||||||| ||||||  ||||||||||| ||| |||| ||||||||| ||||||||||| |||||||    
T  21326597 ttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttttctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcag 21326696  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    |||||||||||||||||| | |  | |||||||||||||||||||||| | | ||||  | | || |||||| |||||||||||||| |||||||||||     
T  21326697 atccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccgaagatttaaatatagtcatatgtgtaggcatttgtaccttgc 21326796  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  21326797 cgttttatg 21326805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 8893429 - 8893624
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||| ||| ||||| |||||| |||| |||||| ||||||||||||    
T  8893429 tcgtctttgtgaggcgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattttcagatcagcttagatccagtgcaaatccaatcaatg 8893528  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||| |  |  |||||| |||||||||||||||||| |||| || | ||||||||| ||||||||||||||||||||||  ||| ||||||||    
T  8893529 actttgacgtcgtcaacgttgtagatccggagacataggtattccggaga-ttgaatatagtcatatgtgtaggcttttgtactctgttgttttatg 8893624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 305 - 496
Target Start/End: Complemental strand, 44513975 - 44513783
Alignment:
Q  305 tttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgacttt 403  Q
    |||||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||    
T  44513975 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgacttt 44513876  T
Q  404 gacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |   |  |  ||||||||||||||||||||| ||| |||| || |||| |||||| ||||||||||||||||| |||| |||  |||||||||    
T  44513875 ggagtcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgctgttttatgt 44513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 479
Target Start/End: Original strand, 5832357 - 5832550
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||| |||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||||||||||||||||| ||||||    
T  5832357 gttggtttgttcgtcgtatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagaccagcttcgatccagtgca 5832456  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    |||| |||||||||||||||| |  | ||||||||||||| ||||||||   | |||| || | || |||||| |||||||||||||| |||||    
T  5832457 gatctaatcaatgactttgacgtcatccacgttgcagatctggagacatgattattccggagatttaaatatagtcatatgtgtaggcatttgt 5832550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 36621475 - 36621683
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||| ||||||||||||| | | |||||| |||| |||||  |||||||||||| ||| |||| ||||||| | || ||| |||| ||||||    
T  36621475 gttggtttgtttgtcgtctttgtgcgacatagtttgtttttcttgtttctttcaggtatttgatcggttcagattgtcacatcaactttgatccagtgca 36621574  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     |||||||||||||||||| |||  | |||||||||||||||||||||| | | ||||||| | || ||||||||||||||||||||| ||||||| |||    
T  36621575 aatccaatcaatgactttggcatcatccacgttgcagatccggagacat-gttattccagagatttaaatataatcatatgtgtaggcatttgtactttg 36621673  T
Q  486 tcgttttatg 495  Q
     | |||||||    
T  36621674 ccattttatg 36621683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 44562740 - 44562531
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| | ||||||||||||| |||||   ||||||||||| | | |||| ||||||||| ||||||||||| ||||||    
T  44562740 gttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgataggttcagattgtcagatcagcttcgatccagtgca 44562641  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  |  |||||||||||||||||||||   | |||| || | || |||||| |||||||||||||| |||||| ||||    
T  44562640 gatccaatcaatgactttggcgtcatctacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgtgtaggcatttgtatcttg 44562541  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  44562540 ccgttttatg 44562531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 472
Target Start/End: Complemental strand, 22344903 - 22344717
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||||| ||||||||||| ||||||    
T  22344903 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgca 22344804  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtagg 472  Q
    ||||||||||||||||||||| |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||    
T  22344803 gatccaatcaatgactttgacgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtagg 22344717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 303 - 494
Target Start/End: Original strand, 11121115 - 11121307
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    |||||||||  ||||||||||||||| |||||| |||| ||||||||||| |||| ||||||||| ||||||||||| |||||||||| |||||||||||    
T  11121115 tctttgtgcaacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgact 11121214  T
Q  402 ttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    |||   | ||  || ||||||||||||||||||| || |||| || | || |||| | |||||||||||||| |  |||| ||||||||||||    
T  11121215 ttggagtcttcaacattgcagatccggagacatatgtattccggagatttaaatacagtcatatgtgtaggcctgagtactttgtcgttttat 11121307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 319 - 496
Target Start/End: Complemental strand, 13969599 - 13969421
Alignment:
Q  319 tttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgt 417  Q
    |||||||||  |||||| |||| ||||||||||| ||||| |||||| | |||||| |||| ||||||||||||||||||||||||||| |  |  ||||    
T  13969599 tttgtctttattgttttgttcaagtatttgttcggttcaaattgtcaaatcagcttagatccagtgcagatccaatcaatgactttgacgtcgtcaacgt 13969500  T
Q  418 tgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |||||||||||||||||  || |||  || ||||||||||| | |||||| ||||||||||||| ||| ||||||||||    
T  13969499 tgcagatccggagacatgagtattctggaaacttgaatatagtaatatgtataggcttttgtactttgccgttttatgt 13969421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 12967723 - 12967515
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| | ||||||||||||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  12967723 gttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 12967624  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     ||||||||||||||||||   |  | ||||||| ||||| ||||||||   | |||| || | || |||||| |||||||||||||| |||||||||||    
T  12967623 tatccaatcaatgactttggtgtcatccacgttgtagatctggagacatgattattccggaga-ttaaatatagtcatatgtgtaggcatttgtaccttg 12967525  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  12967524 ccgttttatg 12967515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 27469699 - 27469490
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| |||||| |||||||||||||| ||||||||||||||| |||||  |||||||| |||||| ||| | ||||||||| ||||||||||| ||||||    
T  27469699 gttgttttgttcatcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtaattgttcaatttagattgtcagatcagcttcgatccagtgca 27469600  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| |||||||| |||||   |  |  ||||||||||||||||||||| | | ||| ||| | || |||||| ||||| |||||||||||  ||| |||    
T  27469599 gatcaaatcaatggctttggagtcgtcaacgttgcagatccggagacatggatattctagagagttaaatatagtcataagtgtaggctttaatactttg 27469500  T
Q  486 tcgttttatg 495  Q
    || |||||||    
T  27469499 tcattttatg 27469490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 33703501 - 33703292
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| |||||  |||| ||||||||| |||||| ||||||||| ||| || |||| |||| |    
T  33703501 gttgttttgtttgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcacgtatttgtttgattcagattgtcagatcaggtttgatccagtgta 33703402  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| ||||||||||||||      |  |||||| ||||||| |||||| | | ||||||| |||| |||||| ||||||||||||||||| |||| |||    
T  33703401 gatcaaatcaatgactttggagccgtcaacgttggagatccgtagacatggatattccagagacttaaatatagtcatatgtgtaggctttagtactttg 33703302  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  33703301 ccgttttatg 33703292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 6212892 - 6212696
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| | |||||||| |||| |||||   ||||||||||| ||||||||  |||||||| ||||||||||| |||||||||||||||||||    
T  6212892 tcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgattcatgttgtcagatcagcttcgatcaagtgcagatccaatcaatg 6212793  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||| |||||||||||||| | | |||| || | || |||||| ||||||| ||||||  |||||| ||| |||||||||    
T  6212792 actttggcgtcatccacgttgtagatccggagacatggttattccggagatttaaatatagtcatatgggtaggcaattgtactttgccgttttatg 6212696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 316 - 495
Target Start/End: Complemental strand, 12148010 - 12147830
Alignment:
Q  316 ttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttca 414  Q
    ||||||||||||| |||||  ||||||||||||||||||||| ||||||||| || ||||||||||||||||||  ||  ||||||||||   |  |  |    
T  12148010 ttgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcaacttcgatctagtgcagataaaaagaatgactttggagtcgtcaa 12147911  T
Q  415 cgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||| |||||||||||| ||| |||| || |||| | |||| ||||||||||||||||| |||| |||||||||||||    
T  12147910 cgttgcaaatccggagacatgggtattccggagacttaagtatagtcatatgtgtaggctttagtactttgtcgttttatg 12147830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 287 - 485
Target Start/End: Complemental strand, 630775 - 630576
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||| ||||||| |||||   ||| ||||||| ||| |  | ||||||||||||||||||||| ||||||    
T  630775 gttggtttgttcgtcgtctttgtgcgacgttgttcgtctttcttgtttctctcaagtatttgatcggtcaagattgtcagaccagcttcgatccagtgca 630676  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| |||||||||||||||| |  | ||||||||||| | |||||||| | | |||| || | || |||||| |||||||||||| | |||||||||||    
T  630675 gatctaatcaatgactttgacgtcatccacgttgcagacctggagacatggttattccggagatttaaatatagtcatatgtgtagacatttgtaccttg 630576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 287 - 493
Target Start/End: Original strand, 47392261 - 47392466
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||||||||||||||||||  |||||  ||||| |||||||||| || |  || ||||| |||||| |||| |||| |    
T  47392261 gttggtttgttcgtcgtctttgtgcggcgttgtttgtctttt-tgtttcgttcagatatttgttcggtttaggttttcagatcagctt-gatccagtgta 47392358  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||| |||||||||| | |  | ||||||| ||||||| |||||| |||  | |||| ||||||||||| ||||||||||| |||||||||| |||    
T  47392359 gatccaataaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcagagacttgaatatagtcatatgtgtatgcttttgtactttg 47392458  T
Q  486 tcgtttta 493  Q
    ||||||||    
T  47392459 tcgtttta 47392466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 338 - 495
Target Start/End: Complemental strand, 15276386 - 15276228
Alignment:
Q  338 tcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacatag 436  Q
    ||||||||||| ||| |||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| | |  | ||||||||||||| ||||||||      
T  15276386 tcaggtatttgatcggttcagattgtgagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctggagacatga 15276287  T
Q  437 gtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     | ||||||| | || |||||| |||||||||||||| ||||||||||| |||||||||    
T  15276286 ttattccagagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatg 15276228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 26199716 - 26199912
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||| |||||| |||||  |||||||||||||||||||||  |||||||| ||||||||||| ||| || ||| ||||||||    
T  26199716 tcgtctttgtgcgacgttgtttatctttcttgtttcgttcaggtatttgttcgattcaggttgtcagatcagcttcgatccagtacaaatcaaatcaatg 26199815  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||  |  |  ||| |||||||||| ||||||| || ||   || |||| |||||| |||||||||||||||||  ||| |||| ||||||||    
T  26199816 actttgaagtcgtcaacgatgcagatccgaagacatacgtattatggagacttaaatatagtcatatgtgtaggctttaatactttgttgttttatg 26199912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 285 - 495
Target Start/End: Complemental strand, 22032084 - 22031884
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  |||||||| || ||||||||||| ||||| |||||  ||| |||||||||||  |||| ||||||||||||| ||||||| ||||    
T  22032084 atgttggtttgttcgtcgtctttatgtggcgttgtttgcctttcttgtttcgttccggtatttgttcagttcatattgtcagaccagtttcgatccagtg 22031985  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
     |||||||||||||||||||| ||||  | |           | |||||||  || |||| || |||||||||||||||||||||||| ||||||||| |    
T  22031984 tagatccaatcaatgactttggcattggtga-----------cagagacatgagtattccggagacttgaatataatcatatgtgtagacttttgtactt 22031896  T
Q  484 tgtcgttttatg 495  Q
    ||||||||||||    
T  22031895 tgtcgttttatg 22031884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 29067172 - 29067379
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  |||||||||||| |||||||||||||||| |||||| |||| |||||| |||| ||| |||| ||||| ||||||||||| ||||||    
T  29067172 gttgttttgttcgtcgtctttgtgcagcgttgtttgtctttcttgttttgttcaagtatttattcggttcaaattttcagatcagcttcgatcaagtgca 29067271  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     || ||||||||| ||||| | |  || |  |||||||||| ||||||| | | |||  ||  |||||| ||| |||||||||||||||||||||| |||    
T  29067272 aattcaatcaatg-ctttggcgtcgtt-aatttgcagatcctgagacatggatattctggaggcttgaaaatagtcatatgtgtaggcttttgtactttg 29067369  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  29067370 tcgttttatg 29067379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 495
Target Start/End: Complemental strand, 33177574 - 33177380
Alignment:
Q  301 cgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatga 399  Q
    |||||||||||  |||||||||| |||  |||||| |||| ||||||||||| |||| ||||||||| || ||| |||| ||||||||||||||||||||    
T  33177574 cgtctttgtgcaacgttgtttgtgtttt-tgttttgttcatgtatttgttcggttcagattgtcagatcaacttagatccagtgcagatccaatcaatga 33177476  T
Q  400 ctttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||   |  |  || ||||| ||||||||||||  || ||   || ||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  33177475 ctttggtgtcgtcaacattgcaaatccggagacatgagtattatggagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatg 33177380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 300 - 481
Target Start/End: Original strand, 4564652 - 4564834
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| | |||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  4564652 tcgtctttgtgcgacgttgtttgtttttcttatttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagattcaatcaatg 4564751  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    ||||||   |  | ||| ||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| |||||||    
T  4564752 actttggtgtcatccacattgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtac 4564834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 291 - 404
Target Start/End: Original strand, 28213175 - 28213289
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatc 389  Q
    |||||||  ||||||||||||| | ||||||||||||| |||||  |||||||||||||||| |||| ||||||||| ||| ||||||| |||| |||||    
T  28213175 gtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctttcaggtatttgttcggttcagattgtcagatcagattcgatccagtgtagatc 28213274  T
Q  390 caatcaatgactttg 404  Q
    |||||||||||||||    
T  28213275 caatcaatgactttg 28213289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 38646707 - 38646916
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||| ||||||   || |||| |||| |||| |||||||||||||||| |    
T  38646707 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttaaccggttcagattgccagatcagcttcgatctagtgta 38646806  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||| |||||||||||||| | |  | |||||||||||||||||||||| | | |||  || | || |||||| |||||||||||| | ||||||| |||    
T  38646807 gatcaaatcaatgactttggcgtcatccacgttgcagatccggagacatggttattctggagatttaaatatagtcatatgtgtagacatttgtactttg 38646906  T
Q  486 tcgttttatg 495  Q
     | |||||||    
T  38646907 cctttttatg 38646916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 303 - 495
Target Start/End: Original strand, 52839669 - 52839862
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    |||||||| | ||||||||||||||| |||||  |||||||||||||||   ||| ||||||||| ||||||||||| |||||||||| |||||||||||    
T  52839669 tctttgtgagacgttgtttgtctttcttgtttcgttcaggtatttgttcagctcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgact 52839768  T
Q  402 ttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||   |  |  |||||||| ||| |||||||| ||| || | || |||| | |||| || |||||||||||||| |||| ||| |||||||||    
T  52839769 ttggagtcgtcaacgttgcaaatctggagacatgggtatttcggaaacttaactatagtcgtatgtgtaggctttagtactttgccgttttatg 52839862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 302 - 495
Target Start/End: Original strand, 10877484 - 10877679
Alignment:
Q  302 gtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgac 400  Q
    ||||||||| ||||||||||||||||| ||||| ||| | ||||| ||||| |||| ||||||| | ||  ||| ||| ||||||||| |||||||||||    
T  10877484 gtctttgtgtggcgttgtttgtctttcttgtttcatttatgtattggttcggttcatattgtcatatcattttcaatccagtgcagattcaatcaatgac 10877583  T
Q  401 tttgacatttttc-acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||| |  |   | |||||| | ||| ||||||||  || ||||||| | |||||| || |||||||||||||||||||||| |||||||||||||    
T  10877584 tttggccgtcggcaacgttgtaaatctggagacatgtgtattccagagaattgaatgtagtcatatgtgtaggcttttgtactttgtcgttttatg 10877679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 401
Target Start/End: Original strand, 23320563 - 23320678
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||| |||||||||| |||||   ||| ||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  23320563 gttggtttgttcgtcgtctttgtgcgacgttatttgtctttcttgtttctctcatgtatttgatcggttcagattgtcagatcagcttcgatccagtgca 23320662  T
Q  386 gatccaatcaatgact 401  Q
    ||||||||||||||||    
T  23320663 gatccaatcaatgact 23320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 300 - 494
Target Start/End: Original strand, 45659150 - 45659345
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||| |||| |||| |||||   | ||||||||| ||| |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  45659150 tcgtctttgtgcgacgttggttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 45659249  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    |||||||| |  |  |||||| ||||||| | |||| | | ||||| | | || | |||| |||||||||||||| ||||||| |||  |||||||    
T  45659250 actttgacgtcatctacgttgtagatccgaaaacatggttattccaaagatttaagtatagtcatatgtgtaggcatttgtactttggtgttttat 45659345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 2350745 - 2350954
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  |||||| |||||| ||||||||||||||    |||| ||||||| |||||||| |||  |||||||||  |||||| ||| ||||||    
T  2350745 gttgttttgttggtcgtctctgtgcgacgttgtttgtcttttcccttttgttcaggtgtttgttcggttcggattgtcagattagcttcaatccagtgca 2350844  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     |||||| ||||||||||| | |  |  |||||||||||||| || ||||| | |||| || | || |||||| |||||| ||||||||||||||| |||    
T  2350845 aatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatagctattccggagattttaatatagtcatatttgtaggcttttgtactttg 2350944  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  2350945 ccgttttatg 2350954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 431
Target Start/End: Complemental strand, 14717248 - 14717116
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   |||| |||||| ||| |||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  14717248 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcagattcgatccagtgcagatccaatcaatg 14717149  T
Q  399 actttgacatttttcacgttgcagatccggaga 431  Q
    || ||| | |  | |||||||||||||||||||    
T  14717148 acattggcgtcatccacgttgcagatccggaga 14717116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 496
Target Start/End: Original strand, 46589283 - 46589481
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaat-caat 397  Q
    |||||||||||||||| |||||||||||| |||||   ||| ||||||||||| |||| ||||||||| ||| ||| ||  |||||| |  |||| ||||    
T  46589283 tcgtctttgtgcggcggtgtttgtctttcttgtttcgctcaagtatttgttcggttcagattgtcagatcagtttcaattcagtgcaaaatcaattcaat 46589382  T
Q  398 gactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |||||||   |  |  |||||||||||||||| ||||  || || |||| |||| |||||| |||||||||||| |||| |||| ||||||||||||||    
T  46589383 gactttggagtcctcaacgttgcagatccggacacatgagtatttcagagacttaaatatactcatatgtgtagactttagtactttgtcgttttatgt 46589481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 494
Target Start/End: Original strand, 40992520 - 40992629
Alignment:
Q  385 agatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacctt 484  Q
    |||| ||||||||||||||| | |  | ||||||||||||||||||||||   | |||| |||| || ||||||||||||||||||||| ||||||| ||    
T  40992520 agatgcaatcaatgactttggcgtcatccacgttgcagatccggagacatgaatattccggatatttaaatataatcatatgtgtaggcatttgtacttt 40992619  T
Q  485 gtcgttttat 494  Q
    ||||||||||    
T  40992620 gtcgttttat 40992629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 425
Target Start/End: Original strand, 10264832 - 10264971
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||  |||||||||| |||| | |||  ||||||||||||||||||||| ||||||||| || ||||||   | ||||    
T  10264832 gttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttttttcgttcaggtatttgttcgattcagattgtcagatcaacttcgagtcattgca 10264931  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatc 425  Q
     ||||||||||| |||||||| |  | |||||||||||||    
T  10264932 aatccaatcaataactttgacgtcgtccacgttgcagatc 10264971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 481
Target Start/End: Original strand, 23257211 - 23257406
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| | | | || ||||||  |  |||||||||| | ||||    
T  23257211 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgattggtccagattgtctaattagcttcgatccactgca 23257310  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    ||||||||||||||||||| | |  | ||||||||||||||||| ||||   | |||| || | ||  ||||| |||||||||||||| |||||||    
T  23257311 gatccaatcaatgactttggcgtcatccacgttgcagatccggatacatgattattccggagatttagatatagtcatatgtgtaggcatttgtac 23257406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 26771323 - 26771438
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    |||||||||||||||||| |||||||  |  |  |||||||||||||| ||||||   | || | || ||||||||||| ||||||||||||||||||||    
T  26771323 agtgcagatccaatcaataactttgatgtcgtcaacgttgcagatccgaagacatgaatatttcggagacttgaatatagtcatatgtgtaggcttttgt 26771422  T
Q  480 accttgtcgttttatg 495  Q
    || |||||||||||||    
T  26771423 actttgtcgttttatg 26771438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 495
Target Start/End: Complemental strand, 34659574 - 34659423
Alignment:
Q  345 tttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttcc 443  Q
    |||||||| |||| ||||||| | |||||| |||| | ||||||||||||||||||||||| | |  |  || ||||||||||||||| || ||| ||||    
T  34659574 tttgttcggttcagattgtcatatcagcttagatccaatgcagatccaatcaatgactttggcgtcgtcaacattgcagatccggagatatgggtattcc 34659475  T
Q  444 agatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | | ||||||||||| ||||| |||||||||||| ||| ||| | |||||||    
T  34659474 aaagacttgaatatagtcataagtgtaggcttttttactttgccattttatg 34659423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 481
Target Start/End: Complemental strand, 32539181 - 32538984
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttg-ttcgattca-attgtcagaccagcttcgatctagtgc 384  Q
    |||||||||||  ||||||||||||| |||||||||| |||  |||||| | || ||||||| || | |||| ||||||||| | ||||||||  |||||    
T  32539181 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttattgttttgtccatgtatttgttttggttcagattgtcagatctgcttcgattcagtgc 32539082  T
Q  385 agatccaatcaatgactttgacatttttcacgttgcagatccggagacataggt-gttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    | |||||||||||||||||| | || | ||  |||||||| |||||||||  ||  |||  || ||||||||||| |||| || ||||||||||||||    
T  32539081 aaatccaatcaatgactttggcgttgtccatattgcagattcggagacatgcgtatttcgggaaacttgaatatagtcatttgcgtaggcttttgtac 32538984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 48655032 - 48654823
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||||||||| |  ||||||||||||||  |||||  |||| |||||||||   |||| ||||||| |  |||||||||  ||||||    
T  48655032 gttggtttgttcgtcgtctttgtacaacgttgtttgtctttattgtttcgttcatgtatttgtttagttcagattgtcatattagcttcgattcagtgca 48654933  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  |||| |||||||||||| | ||||   | || || | | || |||||||||||||| ||||||||||| || |||    
T  48654932 gatccaatcaatgactttggcgtcattcatgttgcagatccgaaaacatgaatatttcaaaaagttaaatataatcatatgcgtaggcttttgcactttg 48654833  T
Q  486 tcgttttatg 495  Q
    |  |||||||    
T  48654832 ttattttatg 48654823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 495
Target Start/End: Complemental strand, 38644787 - 38644579
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||  ||||||||||||| | |||||||| |||| |||||   ||||||||||| | |  ||| ||||||||| ||| ||||||| |||||||    
T  38644787 ttggtttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgattggctcagattgtcagatcagtttcgatccagtgcag 38644688  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    || ||||| |||| | ||   |  | |||||||||||||| ||||||| | | |||| || | || || ||| |||||||||||||| ||||||| |||     
T  38644687 attcaatccatgattgtggagtcatccacgttgcagatccagagacatggttattccggagatttaaaaatagtcatatgtgtaggcatttgtactttgc 38644588  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  38644587 cgttttatg 38644579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 337 - 495
Target Start/End: Complemental strand, 13691704 - 13691545
Alignment:
Q  337 ttcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacata 435  Q
    ||||||| ||||||||||||| ||||||| | || ||||||||||||||| ||||||  |||||||||||| |  |  |||||||||||| |||| |||     
T  13691704 ttcaggtgtttgttcgattcagattgtcaaatcatcttcgatctagtgcaaatccaactaatgactttgacgtcatcaacgttgcagatctggaggcatg 13691605  T
Q  436 ggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
      | ||||||| | || |||||| |||||| ||||||||| ||||  ||| |||||||||    
T  13691604 actattccagagattttaatatagtcatatttgtaggcttatgtattttgccgttttatg 13691545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 404
Target Start/End: Original strand, 34566816 - 34566927
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| ||||||||||||| ||||||||||||||  |   |  |||| || ||||||||||||| ||||||||| ||| ||||||| |||||||||||    
T  34566816 tttgtttgtcgtctttgtgcgacgttgtttgtcttt--tccctggttcaagtgtttgttcgattcagattgtcagatcagtttcgatccagtgcagatcc 34566913  T
Q  391 aatcaatgactttg 404  Q
    || |||||||||||    
T  34566914 aaccaatgactttg 34566927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 433
Target Start/End: Complemental strand, 37685068 - 37684934
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||  | ||||||||||||||| |||||  ||||  |||||||| |||||| ||||||||| ||||||||||| |||||||||  ||| ||||    
T  37685068 tcgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcagattgtcagatcagcttcgatccagtgcagattaaattaatg 37684969  T
Q  399 actttgacatttttcacgttgcagatccggagaca 433  Q
    ||||||   |  |  ||||||||||||||||||||    
T  37684968 actttggagtcgtcaacgttgcagatccggagaca 37684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 433
Target Start/End: Original strand, 37700449 - 37700583
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||  | ||||||||||||||| |||||  ||||  |||||||| |||||| ||||||||| ||||||||||| |||||||||  ||| ||||    
T  37700449 tcgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcagattgtcagatcagcttcgatccagtgcagattaaattaatg 37700548  T
Q  399 actttgacatttttcacgttgcagatccggagaca 433  Q
    ||||||   |  |  ||||||||||||||||||||    
T  37700549 actttggagtcgtcaacgttgcagatccggagaca 37700583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 171292 - 171352
Alignment:
Q  435 aggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||| |||| || |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  171292 aggtattccggagacttgaatataatcatatatgtaggcttttgtactttgtcgttttatg 171352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 12871838 - 12871953
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    ||||||||| | ||||||||||||| |||  |  ||||||||||||| |||||||  || |||| || ||||||||||| |||||  ||||||| | |||    
T  12871838 agtgcagattcgatcaatgactttggcatcgtcaacgttgcagatccagagacatgagtattccggagacttgaatatagtcatacttgtaggcatatgt 12871937  T
Q  480 accttgtcgttttatg 495  Q
    || |||||||||||||    
T  12871938 actttgtcgttttatg 12871953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 293 - 426
Target Start/End: Original strand, 15698328 - 15698461
Alignment:
Q  293 ttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcca 391  Q
    ||||| |||||||||| ||| |||||||||| |||  |||||   ||||||||||| | | |||| ||||||||| |||||||||||  |||||||| ||    
T  15698328 ttgttcatcgtctttgggcgacgttgtttgt-tttgttgtttctctcaggtatttgattggttcagattgtcagatcagcttcgatccggtgcagattca 15698426  T
Q  392 atcaatgactttgacatttttcacgttgcagatcc 426  Q
    ||||||||||||| | |  | ||||||||||||||    
T  15698427 atcaatgactttggcgtcatccacgttgcagatcc 15698461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 37662333 - 37662451
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||| || |||||||||||||     ||| |||||   ||||||| ||| | ||||| ||| ||||||||||||||||||    
T  37662333 gttgttttgtttgtcgtctttgtgaggtgttgtttgtctttttccatttgttcagacgtttgttcaattgagattgttagatcagcttcgatctagtgca 37662432  T
Q  386 gatccaatcaatgactttg 404  Q
    ||||||| |||||||||||    
T  37662433 gatccaaccaatgactttg 37662451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 473
Target Start/End: Original strand, 47551312 - 47551405
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggc 473  Q
    ||||||||||||||||||||||||||| |  |  |||||||||||||||| ||||  || |||  || ||||||||||| |||||| |||||||    
T  47551312 agtgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggc 47551405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 41018813 - 41018714
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatc 389  Q
    ||||||| ||||||||||||| | |||||||||||||| ||| |||||||  | ||||||||||||| ||| | ||| || || |||| |||||||||||    
T  41018813 gtttgttcatcgtctttgtgctgtgttgtttgtctttcttgtcttattcaaatgtttgttcgattcagattattagatcaactccgatttagtgcagatc 41018714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 495
Target Start/End: Original strand, 18343869 - 18343950
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||||  |  |||| || ||||||||||| |||||| ||||||| |  |||||||| |||||||||    
T  18343869 acgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcatgggtaccttgccgttttatg 18343950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 434
Target Start/End: Original strand, 900245 - 900364
Alignment:
Q  316 ttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttca 414  Q
    ||||||||||||  |||||  | ||| ||| |||||| |||| ||||||| | || ||| |||| ||||| ||||||||||||||||||||| |  | ||    
T  900245 ttgtttgtcttttttgtttcgtccagatatctgttcggttcagattgtcatatcaactttgatccagtgcggatccaatcaatgactttgacgtcatcca 900344  T
Q  415 cgttgcagatccggagacat 434  Q
    ||||| |||||| |||||||    
T  900345 cgttgtagatccagagacat 900364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 495
Target Start/End: Complemental strand, 28399233 - 28399118
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    ||||||||||||||||||||||||  |||| |  || ||||||||| | |||| || || || | || ||||||||||| |||||| |||| || | |||    
T  28399233 agtgcagatccaatcaatgacttttgcattgtcaacattgcagatctgaagacctaagtatttcggagacttgaatatagtcatatttgtaagcatatgt 28399134  T
Q  480 accttgtcgttttatg 495  Q
    || ||| |||||||||    
T  28399133 actttgccgttttatg 28399118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 29938449 - 29938508
Alignment:
Q  375 gatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    |||| ||||||||||||||||||||||||| | || |  |||||||| ||||||||||||    
T  29938449 gatcaagtgcagatccaatcaatgactttggcgttatcaacgttgcaaatccggagacat 29938508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 32878925 - 32879040
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    ||||||||||| |||||||||||||   |  |  |||||| ||||||||||||||  || ||||  | ||||||||||| |||||| ||||||| |  ||    
T  32878925 agtgcagatccgatcaatgactttggtgtcgtcaacgttgtagatccggagacatgagtattccgaaaacttgaatatagtcatatttgtaggcataagt 32879024  T
Q  480 accttgtcgttttatg 495  Q
    || |||||||||||||    
T  32879025 actttgtcgttttatg 32879040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 494
Target Start/End: Complemental strand, 9298320 - 9298206
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    ||||||||||| ||||||||||||| |||  |  ||| |||||||||||||| ||  || || | || |||||||||||||||||| | ||||| |  ||    
T  9298320 agtgcagatccgatcaatgactttggcatcgtcaacgatgcagatccggagatatgagtatttcggagacttgaatataatcatatttataggcataggt 9298221  T
Q  480 accttgtcgttttat 494  Q
    || ||||| ||||||    
T  9298220 actttgtcattttat 9298206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 30853780 - 30853744
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgt 323  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  30853780 gttggtttgttcatcgtgtttgtgcggcgttgtttgt 30853744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 5e-45; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 40797169 - 40797365
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  40797169 tcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcgattcagattgtcagatcagcttcgatctagtgcagatcaaatcaatg 40797268  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   |  |  || ||| |||||||||||||  ||| |||| || |||| |||||| ||||||||||||||||| |||| |||||||||||||    
T  40797269 actttggagtcatcaacattgtagatccggagacaagggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatg 40797365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 913294 - 913098
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||||||||| |||||| ||  |||||||||||| |||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  913294 tcgtctttgtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatg 913195  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   |  |  |||||||||||||||||||| |||| || | || |||| |||||| ||||||||||||||||| |||| ||| |||||||||    
T  913194 actttggagtcatcaacgttgcagatccggagacaaaggtatttcggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 913098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 22844188 - 22844384
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||| ||||||||| || |||||||| |||||||||| ||||||||    
T  22844188 tcgtctttgtgcgacgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattgtcagatcaacttcgatcaagtgcagatcaaatcaatg 22844287  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   || |  || ||||||||||| |||||| ||| |||| || || | |||||| ||||||| ||||||||| |||| |||||||||||||    
T  22844288 actttggagttgtcaacattgcagatccgaagacatgggtattccggagacctaaatatagtcatatgcgtaggctttagtactttgtcgttttatg 22844384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 285 - 479
Target Start/End: Complemental strand, 32237989 - 32237794
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  |||||||||||||||||||||||||||||  ||||  |||||||||||||||| |||| ||||||||| |||||| |||| ||||    
T  32237989 atgttggtttgttcgtcgtctttgtgcggcgttgtttgtctttctagtttcgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtg 32237890  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    || || ||||||||||||||||  || | ||||||||||||||| |||||| | | || | || | |||||| || ||||||||||||||||||||    
T  32237889 cacattcaatcaatgactttgatgttgtccacgttgcagatccgaagacatggatatttcggagatttgaatttagtcatatgtgtaggcttttgt 32237794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 22286729 - 22286533
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||| ||||| ||| |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  22286729 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggcatttgatcgcttcatattgtcagatcagcttcgatccagtgcagatccaatcaatg 22286630  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||| |  | ||||||||||||| ||| |||| | | ||||||| | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  22286629 actttgacgtcatccacgttgcagatctggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 22286533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 300 - 494
Target Start/End: Complemental strand, 32089908 - 32089714
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||| ||| ||||||||||||| |||||  |||| ||||||||| | || | ||||||| | ||||||||||| |||||||||||||||||||    
T  32089908 tcgtctttgtggggcattgtttgtctttcttgtttcgttcatgtatttgtttggtttagattgtcatatcagcttcgatccagtgcagatccaatcaatg 32089809  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    | |||||| |  |  |||||| | ||||| |||||||||| |||| || ||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  32089808 attttgacgtcgtcaacgttgaatatccg-agacataggtattccggagacttgaatatagtcacatgtgtaggcttttgtactttgtcgttttat 32089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 4019731 - 4019930
Alignment:
Q  300 tcgtctttgtgcggcgttgttt---gtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatca 395  Q
    ||||||||||||||||||||||   ||||||  |||||| |||||||||||||||| |||| ||||||||| |||||| |||| ||||||||||||||||    
T  4019731 tcgtctttgtgcggcgttgttttttgtctttattgttttgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgcagatccaatca 4019830  T
Q  396 atgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||| | |  |  ||||||||||||||||| |||  || |||  || ||||||||||| | || ||| ||||||| ||||| |||||||||||||    
T  4019831 atgactttggcgtcgtcaacgttgcagatccggaggcatgagtattctggagacttgaatatagtaatctgtataggcttatgtactttgtcgttttatg 4019930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 3088642 - 3088446
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||  ||| |||| ||||||||| || |||||||| |||||||||||||||||||    
T  3088642 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagattgtcagatcatcttcgatccagtgcagatccaatcaatg 3088543  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| ||||||| |||| ||||||||    
T  3088542 actttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgttgttttatg 3088446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 316 - 495
Target Start/End: Original strand, 21586051 - 21586231
Alignment:
Q  316 ttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttca 414  Q
    ||||||||||||  |||||| |||||||| ||||||| |||| ||||||||||||||||||||  |||||| |||||||||||||||||||| |  | ||    
T  21586051 ttgtttgtcttttttgttttgttcaggtacttgttcggttcagattgtcagaccagcttcgattcagtgcaaatccaatcaatgactttgacgtcgtcca 21586150  T
Q  415 cgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||| ||||||||||||||  || |||| || | ||||||||| | |||||||||| ||||||||| |||  ||||||||    
T  21586151 cgttggagatccggagacatgtgtattccggagagttgaatatagtgatatgtgtagccttttgtactttgctgttttatg 21586231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 28995287 - 28995091
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   | ||||||||| ||| |||| ||||||| | ||||||||||| |||||||||||||||||||    
T  28995287 tcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcgcttcagattgtcatatcagcttcgatccagtgcagatccaatcaatg 28995188  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  28995187 actttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 28995091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 39340335 - 39340531
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||||||||||||||||||| |||||  || | ||||||||||| || | ||||||| | || ||| |||||||||| ||| |||||||||    
T  39340335 tcgtctttgtgcggcgttgtttgtctttcttgtttcgttaatgtatttgttcggtttagattgtcatatcaacttagatctagtgctgattcaatcaatg 39340434  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  |  |||||||||||||||||||||  || |||| || ||||||||||| |||||||||||||||||| ||| ||  |||||||||    
T  39340435 actttgtcgtcgtcaacgttgcagatccggagacatgtgtattccggagacttgaatatagtcatatgtgtaggcttttatacttttccgttttatg 39340531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 50519919 - 50520115
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  50519919 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagattcaatcaatg 50520018  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | |||| | |  | ||||||||||||| ||| |||| | | |||| || | || |||||| |||||||||||||| ||||||| |||||||||||||    
T  50520019 attttggcgtcatccacgttgcagatctggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatg 50520115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 291 - 493
Target Start/End: Complemental strand, 29776677 - 29776474
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatc 389  Q
    |||||||  |||||||||| |||||||||||||||||| |||||  |||||||||||||||| ||   ||||||||| |||||| |||  |||||| |||    
T  29776677 gtttgttcgtcgtctttgtacggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttttgattgtcagatcagcttagattcagtgcaaatc 29776578  T
Q  390 caatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgt 489  Q
    |||||||| ||||||   || | |||||  || |||||||||||  ||| || |||| ||||||||||| ||||||||| |||||||||||| |||||||    
T  29776577 caatcaataactttggtgttgtccacgtcacaaatccggagacaagggtatttcagagacttgaatatagtcatatgtgcaggcttttgtactttgtcgt 29776478  T
Q  490 ttta 493  Q
    ||||    
T  29776477 ttta 29776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 303 - 496
Target Start/End: Original strand, 53426937 - 53427131
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    |||||||| | | ||||||||||||| |||||| |||||||||||||||| || | |||||||||  ||||| ||| |||||||||||||||||||||||    
T  53426937 tctttgtgtgcctttgtttgtctttcttgttttgttcaggtatttgttcggtttagattgtcagataagcttagatatagtgcagatccaatcaatgact 53427036  T
Q  402 ttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||| | |  |  |||||||||||||| |||| |  || ||||  | ||||||||||| |||||||||||||||||||||| ||||  ||||||||    
T  53427037 ttggcgtcgtcaacgttgcagatccgaagacttgagtattccgaagacttgaatatagtcatatgtgtaggcttttgtactttgtgattttatgt 53427131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 43029806 - 43030015
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||||| ||||||||||| ||||||    
T  43029806 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgca 43029905  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||||||||   |  | ||||||||||||||||| |||| | | |||| || | || |||||| ||||||||||||||  |||||| |||    
T  43029906 gatccaatcaatgactttggagtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtaggcaattgtactttg 43030005  T
Q  486 tcgttttatg 495  Q
     | |||||||    
T  43030006 ccattttatg 43030015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 292 - 495
Target Start/End: Original strand, 34767114 - 34767318
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||| ||||||||||||| |  |||||||||||||| |||||  |||| ||||||||||  ||||| |||||||| || |||||||| ||||||||||     
T  34767114 tttgtctatcgtctttgtgtgatgttgtttgtctttcttgtttcgttcaagtatttgttcagttcaaattgtcagaacaacttcgatcaagtgcagatct 34767213  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    ||| ||||| ||||   |  | ||| ||||| |||||||||||| ||| |||| || ||||||||||| || ||||||||||||||||||| ||| ||||    
T  34767214 aattaatgattttggtgtcgtccacattgcatatccggagacatgggtattccggagacttgaatatagtcttatgtgtaggcttttgtactttgccgtt 34767313  T
Q  491 ttatg 495  Q
    |||||    
T  34767314 ttatg 34767318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 315 - 496
Target Start/End: Original strand, 50460341 - 50460523
Alignment:
Q  315 gttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttc 413  Q
    |||||||||||||| | |||  ||||| |||||||||| || | ||||||||| ||| ||||||| | |||| ||||||||||| |||||||| || |      
T  50460341 gttgtttgtctttcttatttcgttcagttatttgttcggtttagattgtcagatcagtttcgatccaatgcaaatccaatcaataactttgacgttgtca 50460440  T
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |||||||| ||||| ||||||  || ||||| | ||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  50460441 acgttgcaaatccgaagacatgagtattccaaagacttgaatatagtcatatgtgtaggcttttgtactttgttgttttatgt 50460523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 305 - 485
Target Start/End: Original strand, 45664362 - 45664543
Alignment:
Q  305 tttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgacttt 403  Q
    |||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  45664362 tttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgacttt 45664461  T
Q  404 gacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    | | |  | ||||||||||||||||||| || | | | || || | || |||||| || |||||||| || |||||||||||    
T  45664462 ggcgtcatccacgttgcagatccggagatatggttatcccggagatttaaatatagtcgtatgtgtatgcatttgtaccttg 45664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 305 - 495
Target Start/End: Original strand, 27831240 - 27831431
Alignment:
Q  305 tttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgacttt 403  Q
    ||||| ||| || ||||||||||| |||||| ||||  |||||||| |||||| ||||||||| |||||| ||||||||||||||| |||| ||||||||    
T  27831240 tttgttcggagtagtttgtctttcttgttttgttcatatatttgtttgattcagattgtcagatcagctttgatctagtgcagatctaatccatgacttt 27831339  T
Q  404 gacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | | |  | |||| || |||||||||||||  ||| |||| || |||||||| | |||| |||||||| ||||||||  |||||||||||||    
T  27831340 ggcgtcgtccacgctgtagatccggagacacgggtattccggagacttgaatgtgatcacatgtgtagtcttttgtattttgtcgttttatg 27831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 285 - 495
Target Start/End: Complemental strand, 40461988 - 40461777
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||| ||||||  ||||||||||||||||||||||||||||| ||||| || ||  |||||| | | |||| |||||||||  ||||| ||||   ||    
T  40461988 atgttgatttgttcgtcgtctttgtgcggcgttgtttgtctttcttgtttcatacatatatttgattggttcagattgtcagattagctttgatcatatg 40461889  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
     ||||||||||||||| |||  | |||| ||| ||||||||| |||||||| ||| |  |||| ||||||||||| |||||||| ||| ||||||||| |    
T  40461888 tagatccaatcaatgaatttagcgttttccaccttgcagatctggagacatgggtatcacagagacttgaatatagtcatatgtatagccttttgtactt 40461789  T
Q  484 tgtcgttttatg 495  Q
    ||||||| ||||    
T  40461788 tgtcgttctatg 40461777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 1165387 - 1165178
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||  |||||||||| |||| |||||   ||||||||||| ||  |||| ||||| ||| ||||||||||| ||||||    
T  1165387 gttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatcagcttcgatccagtgca 1165288  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | ||||||||||||||||| |||| | | |||  || | || |||||| |||||||||||| |  |||||| |||    
T  1165287 gatccaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatatagtcatatgtgtagacaattgtactttg 1165188  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  1165187 ccgttttatg 1165178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 494
Target Start/End: Complemental strand, 20201048 - 20200841
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||| || |||||||| |  ||||||||| |||| |||||   |||| |||||| ||| |||| ||||||||| ||||||| ||| |||||||    
T  20201048 ttggtttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgtcagatcagcttcaatcaagtgcag 20200949  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    |||||||||||||||| | | | || ||||||||| ||||||||||||   | || | || | || |||||| |||||||||||||| ||||||| |||     
T  20200948 atccaatcaatgacttcggcgtcttccacgttgcaaatccggagacatgattatttcggagatttaaatatagtcatatgtgtaggcatttgtactttgc 20200849  T
Q  487 cgttttat 494  Q
    ||||||||    
T  20200848 cgttttat 20200841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 337 - 495
Target Start/End: Original strand, 33076458 - 33076617
Alignment:
Q  337 ttcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacata 435  Q
    |||||||||||| ||| |||| ||||| |||  ||||| |||| ||||||||||||||||||||||||||| |  | |||||||||||||||||| |||     
T  33076458 ttcaggtatttgatcggttcagattgttagattagctttgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggaggcatg 33076557  T
Q  436 ggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | | |||| || | ||||||||| |||||||||| ||| ||||||| ||| |||||||||    
T  33076558 gttattccggagatttgaatatagtcatatgtgttggcatttgtactttgccgttttatg 33076617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 288 - 494
Target Start/End: Complemental strand, 20203230 - 20203023
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||| || |||||||| |  ||||||||| |||| |||||   |||| |||||| ||| |||| ||||||||| ||||||| ||| |||||||    
T  20203230 ttggtttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgtcagatcagcttcaatcaagtgcag 20203131  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    |||||||||||||||| | | | || ||||||||| || |||||||||   | || | || | || |||||| |||||||||||||| ||||||| |||     
T  20203130 atccaatcaatgacttcggcgtcttccacgttgcaaattcggagacatgattatttcggagatttaaatatagtcatatgtgtaggcatttgtactttgc 20203031  T
Q  487 cgttttat 494  Q
    ||||||||    
T  20203030 cgttttat 20203023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 480
Target Start/End: Original strand, 11846680 - 11846865
Alignment:
Q  295 gtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaat 393  Q
    |||| ||||||||||||| |||| ||| |||||| |||||   ||||||||||| ||| |||| ||||||||| |||||| ||||   |||| |||||||    
T  11846680 gtttgtcgtctttgtgcgacgtttttt-tctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctttgatccgatgcatatccaat 11846778  T
Q  394 caatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgta 480  Q
    |||||| |||| | |  | |||||||||||||||||||||| | | |||  |||| || |||||| |||||||||||||| ||||||    
T  11846779 caatgattttggcgtcatccacgttgcagatccggagacatggttattctggatatttaaatatagtcatatgtgtaggcatttgta 11846865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 473
Target Start/End: Original strand, 21803708 - 21803841
Alignment:
Q  340 aggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtg 439  Q
    ||||||||| | | ||||||||| ||| |||||||||||  ||||| |||||||||||||||||||| |  | |||||||||||||||||||||| | |     
T  21803708 aggtatttgattggttcaattgttagatcagcttcgatcccgtgcaaatccaatcaatgactttgacgtcatccacgttgcagatccggagacatggtta 21803807  T
Q  440 ttccagatacttgaatataatcatatgtgtaggc 473  Q
    |||| || | || |||| | ||||||||||||||    
T  21803808 ttccggagatttaaatacagtcatatgtgtaggc 21803841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 404
Target Start/End: Original strand, 42106283 - 42106379
Alignment:
Q  309 tgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttg 404  Q
    |||| |||| |||||||||| |||||| ||  |||||||||||| |||| ||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  42106283 tgcgacgttatttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactttg 42106379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 494
Target Start/End: Original strand, 54240209 - 54240417
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||   ||||||||||||  ||||||||| |||| |||||   ||||||||||| ||| |||| ||||| ||| ||||||||||  ||||||    
T  54240209 gttggtttgttcgacgtctttgtgcgatgttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtgagatcagcttcgattcagtgca 54240308  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     |||||||||||||||||| |    | || |||||||||||||||||||   | || |  | | || |||||| |||||||||||||| ||||||  |||    
T  54240309 aatccaatcaatgactttggcgacatccatgttgcagatccggagacatgattattacgaagatttaaatatagtcatatgtgtaggcatttgtattttg 54240408  T
Q  486 tcgttttat 494  Q
    |||||||||    
T  54240409 tcgttttat 54240417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 495
Target Start/End: Original strand, 37051767 - 37051926
Alignment:
Q  337 ttcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacata 435  Q
    ||||||| |||| |||||||| ||||||||| ||| ||||||| ||||||||||||| |||| |||||| | |  |  ||||||||||||||||| ||||    
T  37051767 ttcaggtgtttgctcgattcagattgtcagatcagtttcgatccagtgcagatccaaccaataactttggcgtcatcaacgttgcagatccggaggcata 37051866  T
Q  436 ggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | | ||||  | | || |||||| |||||| ||||||||| ||||| ||| |||||||||    
T  37051867 gctattccgaagattttaatatagtcatatttgtaggcttatgtactttgccgttttatg 37051926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 426
Target Start/End: Complemental strand, 41882388 - 41882261
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||| ||| |||||||||  ||||||||    
T  41882388 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcaatccagtgcagatttaatcaatg 41882289  T
Q  399 actttgacatttttcacgttgcagatcc 426  Q
    |||||| | |  | ||||||||||||||    
T  41882288 actttggcgtcatccacgttgcagatcc 41882261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 25939470 - 25939352
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||||||||||||||||||  |||||  ||||| ||||||||   |||| ||||| ||| |||||| |||  ||||||    
T  25939470 gttgttttgttagtcgtctttgtgcggcgttgtttgtctttgttgtttcgttcagatatttgttatgttcagattgttagatcagcttagattcagtgca 25939371  T
Q  386 gatccaatcaatgactttg 404  Q
    |||||||||||||||||||    
T  25939370 gatccaatcaatgactttg 25939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 458
Target Start/End: Complemental strand, 25373998 - 25373901
Alignment:
Q  361 gtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatata 458  Q
    |||||| || |||||||| |||||| ||| |||||||||||||||| |  ||||||||||||||||||||| ||  || ||||||| |||||||||||    
T  25373998 gtcagatcaacttcgatccagtgcatatctaatcaatgactttgacgtcgttcacgttgcagatccggagatatgagtattccagagacttgaatata 25373901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 496
Target Start/End: Complemental strand, 33977903 - 33977706
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaatt-gtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| | || |||||   ||||||||||| ||| |||| || || ||| ||| ||||||  |||||||||||||||||||    
T  33977903 tcgtctttgtgcgacgttgtttgtttgtcttgtttctctcaggtatttgatcgcttcagtttgttagatcagtttcgattcagtgcagatccaatcaatg 33977804  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||||||   |  | ||||||||||||||||| | || | | |||  || | || |||||| | |||||||||||| ||||||| ||| ||||||||||    
T  33977803 actttggtgtcatccacgttgcagatccggaaatatggttattctggaaatttaaatatagttatatgtgtaggcatttgtactttgccgttttatgt 33977706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 465
Target Start/End: Complemental strand, 22893706 - 22893526
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  || ||||||| |||||||||||||||||| |||||  ||||| |||||||  | |||| ||||||| |  || || |||| ||||||    
T  22893706 gttggtttgttcgtcatctttgtacggcgttgtttgtctttcttgtttcgttcagatatttgtatggttcatattgtcatatgagttttgatccagtgca 22893607  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttcc-agatacttgaatataatcatat 465  Q
    |||| |||||||||||||| | || |||||||||||  |||| | |||| ||| |||| ||| |||| |||||| ||||||    
T  22893606 gatctaatcaatgactttggcgttgttcacgttgcaagtccgaatacatgggtattccgagagacttaaatatagtcatat 22893526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 495
Target Start/End: Complemental strand, 43839436 - 43839299
Alignment:
Q  358 attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat 457  Q
    ||||||||| || |||||||  |||||||||||||||||| ||| || | |  | ||||||||||||||| |||| | | | ||||  | | || |||||    
T  43839436 attgtcagatcaacttcgattcagtgcagatccaatcaataactctggcgtcatccacgttgcagatccgaagacgtggttattccgaagatttaaatat 43839337  T
Q  458 aatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||| ||||||| ||| |||||||||    
T  43839336 aatcatatgtgtaggcatttgtactttgccgttttatg 43839299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 495
Target Start/End: Complemental strand, 47914579 - 47914375
Alignment:
Q  293 ttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttat-tcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    |||||| |||||||||| || |||||||||| |||| |||||| | ||||||||||| |   |||| ||||| | | ||||||||||  |||||||||||    
T  47914579 ttgtttgtcgtctttgtccgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagattgttatatcagcttcgattcagtgcagatcc 47914480  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    |||||||||||||| | |  | ||||||||||||||  | |||| | |||| | || | || || ||| |||| ||||||| | ||||||| ||||| ||    
T  47914479 aatcaatgactttggcgtcatccacgttgcagatccttaaacatggttgtttcggagatttaaacatagtcatgtgtgtagacatttgtactttgtcatt 47914380  T
Q  491 ttatg 495  Q
    |||||    
T  47914379 ttatg 47914375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 20251853 - 20251928
Alignment:
Q  359 ttgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||  |||||||||| |||||| ||||||||||||||||||||    | ||||||||||||||||||||||    
T  20251853 ttgtcagattagcttcgatccagtgcaaatccaatcaatgactttgactccatccacgttgcagatccggagacat 20251928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 403
Target Start/End: Complemental strand, 48061030 - 48060963
Alignment:
Q  337 ttcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgacttt 403  Q
    |||||||||||||||| |||| |||||||||  || |||||||||||||| |||||||||||||||||    
T  48061030 ttcaggtatttgttcggttcagattgtcagattagtttcgatctagtgcaaatccaatcaatgacttt 48060963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 403
Target Start/End: Complemental strand, 29182599 - 29182484
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||| ||||||| ||| |||| ||||||  | |||||| |||| ||||||    
T  29182599 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcggttcagattgtc--atcagctttgatccagtgca 29182502  T
Q  386 gatccaatcaatgacttt 403  Q
    ||||||||||||| ||||    
T  29182501 gatccaatcaatggcttt 29182484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 291 - 495
Target Start/End: Complemental strand, 35501746 - 35501541
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttat-tcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagat 388  Q
    ||||||| |||||||||||||| |||| | ||| |||| | |||| | ||||||||||| ||| ||||  ||||||||  |||||||||| | |||| ||    
T  35501746 gtttgttcatcgtctttgtgcgacgttatatgtttttc-tattttctctcaggtatttgatcggttcaggttgtcagattagcttcgatccaatgcaaat 35501648  T
Q  389 ccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcg 488  Q
     |||||||||||||||||    | |||||||||||||||||||||| | |||||  |  | || |||||| ||||||||||| ||  || ||| |||||     
T  35501647 tcaatcaatgactttgactccatccacgttgcagatccggagacatggttgttctggtgatttaaatatagtcatatgtgtaagcaattatactttgtca 35501548  T
Q  489 ttttatg 495  Q
    |||||||    
T  35501547 ttttatg 35501541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 406
Target Start/End: Original strand, 43242936 - 43243051
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    |||||||  |||||||||| ||| |||||||| |||  ||||| |||||||||||| ||||  ||| ||||||| | || ||| ||| |||||||||||     
T  43242936 tttgtttgccgtctttgtggggctttgtttgtttttattgtttcattcaggtatttattcggctcagattgtcatatcaactttgatatagtgcagatca 43243035  T
Q  391 aatcaatgactttgac 406  Q
    |||||||||| |||||    
T  43243036 aatcaatgaccttgac 43243051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 40883738 - 40883657
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||| ||||||  || || | ||||| |||||||| |||||| |||||||||  |||| |||||||||||||    
T  40883738 acgttgcagatccgaagacatgagtatttcggatacatgaatatagtcatatttgtaggcttgggtactttgtcgttttatg 40883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 49627967 - 49627886
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||||  || ||||||| || |||||||| |||||| ||||||| |  |||| ||| |||||||||    
T  49627967 acgttgcagatccggagacatgagtattccagagacatgaatatagtcatatttgtaggcataggtactttgccgttttatg 49627886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 19861171 - 19861100
Alignment:
Q  394 caatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatat 465  Q
    |||||||||||||||  |  |||||||||||||||||||||  || ||| ||| ||||||||||| ||||||    
T  19861171 caatgactttgacatcgtcaacgttgcagatccggagacatgagtattctagagacttgaatatagtcatat 19861100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 401
Target Start/End: Complemental strand, 36540637 - 36540550
Alignment:
Q  315 gttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    |||||||||||||| ||||| ||||| |||||||| || |||| ||||||||| || |||||||  ||| |||||  |||||||||||    
T  36540637 gttgtttgtctttcttgtttcattcaagtatttgtccggttcagattgtcagatcaacttcgattcagtacagattaaatcaatgact 36540550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 25374060 - 25374014
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttt 334  Q
    |||||||||||||||||| |||||| |||||||| |||||| |||||    
T  25374060 ttggtttgtttatcgtctatgtgcgacgttgtttttctttcttgttt 25374014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 1074766 - 1074717
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcat 463  Q
    |||||||||||||||||||||  || |||| || ||||||||||||||||    
T  1074766 acgttgcagatccggagacatgagtattccggagacttgaatataatcat 1074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 481
Target Start/End: Complemental strand, 25939325 - 25939292
Alignment:
Q  448 acttgaatataatcatatgtgtaggcttttgtac 481  Q
    ||||||||||| ||||||||||||||||||||||    
T  25939325 acttgaatatagtcatatgtgtaggcttttgtac 25939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 32080626 - 32080545
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||||  |  || | || ||||||||||| |||||| ||||||| |  |||||||||| |||||||    
T  32080626 acgttgcagatccggagacatgaggatttcggagacttgaatatagtcatatttgtaggcgtaggtaccttgtctttttatg 32080545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 48652312 - 48652231
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||||  |  |||| || ||||||||||| |||||| ||||||| |  ||||||||  ||||||||    
T  48652312 acgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgctgttttatg 48652231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 495
Target Start/End: Original strand, 55455108 - 55455209
Alignment:
Q  394 caatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtttta 493  Q
    ||||||||||| | |  || |||||||||||||||||||||  || |||| || || |||||||| |||||| |||| || | ||||| ||| |||||||    
T  55455108 caatgactttggcgtcgttaacgttgcagatccggagacatgagtattccggagacatgaatatagtcatatttgtaagcatatgtactttgccgtttta 55455207  T
Q  494 tg 495  Q
    ||    
T  55455208 tg 55455209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 40365349 - 40365385
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgt 323  Q
    |||||||||||| |||||||||| |||||||||||||    
T  40365349 gttggtttgtttgtcgtctttgtacggcgttgtttgt 40365385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 285 - 495
Target Start/End: Complemental strand, 26017651 - 26017440
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  ||||||||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||| | ||||||||||| ||||    
T  26017651 atgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtg 26017552  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    ||||||||||||||||||||| | |  ||||||||||| || ||||||||| | | |||| || | || |||||| |||||||||||||| |||||||||    
T  26017551 cagatccaatcaatgactttggcgtcattcacgttgcaaattcggagacatggctattccggagatttaaatatagtcatatgtgtaggcatttgtacct 26017452  T
Q  484 tgtcgttttatg 495  Q
    || |||||||||    
T  26017451 tgccgttttatg 26017440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 30992814 - 30992605
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||| ||||||||||||||| || ||   ||||||||||| ||| |||| ||||||||| || |||||||||||||||    
T  30992814 gttgatttgttcgtcgtctttgtgcgacgttgtttgtctttcttggttctctcaggtatttgatcggttcagattgtcagatcaacttcgatctagtgca 30992715  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||| | | |||| || | || |||||| ||||||||||| || |||||||||||    
T  30992714 gatccaatcaatgactttgacatcatccacgttgcagatccggaggcatggctattccggagatttaaatatagtcatatgtgtatgcatttgtaccttg 30992615  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  30992614 ccgttttatg 30992605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 23732384 - 23732175
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  || |||||||||| || |||||||||||| |||||  |||||||||||| ||| |||| ||||||| |  |||||||||| ||||||    
T  23732384 gttggtttgttcgtcatctttgtgcgtcgctgtttgtctttcttgtttcgttcaggtatttggtcggttcagattgtcaaattagcttcgatccagtgca 23732285  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | ||||||||||||| ||||| |    | || |||||||||||||||||||||||||||| |||||||||| |||    
T  23732284 gatccaatcaatgactttggcgtcgtccacgttgcagatctggagaaacgactatttcagatacttgaatataatcatatgtgtatgcttttgtactttg 23732185  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  23732184 tcgttttatg 23732175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 40775390 - 40775599
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||||||||||    
T  40775390 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatctagtgca 40775489  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | |||||||||||||| ||||||| | | |||| || | || |||||| |||||||||||| |  |||||| |||    
T  40775490 gatccaatcaatgactttggcgtcatccacgttgcagatccagagacatggttattccggagatttaaatatagtcatatgtgtagacaattgtactttg 40775589  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  40775590 ccgttttatg 40775599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 287 - 494
Target Start/End: Original strand, 14707706 - 14707913
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||| |||||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||| || || |||||||| | ||||    
T  14707706 gttggtttgttagtcgtttttgtgcggcgttgtttgtctttcttgtttcatttaggtatttgttcgattcaaattgtctgatcatcttcgatccaatgca 14707805  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||| |||||||||  |||  | || |||||||||| | |||||| ||| |||  ||||| |||||||| |||||||||||||||||||||| |||    
T  14707806 gatccaattaatgactttatcatcgtccatgttgcagatctgaagacat-ggtattctggatacatgaatatagtcatatgtgtaggcttttgtactttg 14707904  T
Q  486 tcgttttat 494  Q
     | ||||||    
T  14707905 ccattttat 14707913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 285 - 494
Target Start/End: Complemental strand, 43807143 - 43806933
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  || |||||||||| ||||||||||||||| |||||   |||||| |||| ||| |||| ||||| ||| ||||||||||||||||    
T  43807143 atgttggtttgttcgtcatctttgtgcgacgttgtttgtctttcttgtttctctcaggtgtttgatcggttcagattgtaagatcagcttcgatctagtg 43807044  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    ||||||||||||||||||||| |    | ||||||||||||||||||| || | | |||| |||| || |||||| ||||||||||| || |||||| ||    
T  43807043 cagatccaatcaatgactttggcggcatccacgttgcagatccggagatatggctattccggatatttaaatatagtcatatgtgtaagcatttgtatct 43806944  T
Q  484 tgtcgttttat 494  Q
    || ||||||||    
T  43806943 tgccgttttat 43806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 28015493 - 28015689
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||| ||||| |||||  |||||||||||||||| |||| ||||| ||| ||||||||||| |||||||||| ||||||||    
T  28015493 tcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgttagatcagcttcgatccagtgcagatcaaatcaatg 28015592  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   |  |  || |||||||||||||||||||||| |||  ||  ||| |||||| ||||||||||||||||| |||| ||| |||||||||    
T  28015593 actttggagtcgtcaacattgcagatccggagacataggtattctggaggcttaaatatattcatatgtgtaggctttagtactttgccgttttatg 28015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 493
Target Start/End: Original strand, 44681583 - 44681790
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||| |||||| | ||||||||||||||| |||||  || || ||||| ||   |||| ||||||| |||||||||||||  ||| |    
T  44681583 gttggtttgttcgtcgtttttgtgggacgttgtttgtctttcttgtttcgtttagatatttattatgttcagattgtcaaaccagcttcgatccggtgta 44681682  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||||||||||||  | || ||||||||| ||||||||| ||| ||||||| |||| || ||| |||||| ||||| ||||||||| |||    
T  44681683 gatccaatcaatgactttgacataatccaggttgcagattcggagacatgggtattccagagacttaaaaatagtcatatatgtagacttttgtactttg 44681782  T
Q  486 tcgtttta 493  Q
    ||||||||    
T  44681783 tcgtttta 44681790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 287 - 494
Target Start/End: Original strand, 772566 - 772774
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||| | |||||||||||||   ||||||||||||| |||||  |||||||||||||||| |||| ||||||||| ||||||| ||||||||||    
T  772566 gttgttttgtctgtcgtctttgtgcgatattgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagcttcaatctagtgca 772665  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  |  || ||| |||||| |||||||  || || | || | |  || ||| |||||||||||||||||||||| |||    
T  772666 gatccaatcaatgactttggcgtcgtcaacattgaagatccagagacatgagtatttcggagaatgaaaaatagtcatatgtgtaggcttttgtactttg 772765  T
Q  486 tcgttttat 494  Q
    |||||||||    
T  772766 tcgttttat 772774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 8611602 - 8611406
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   |||||| |||| ||| |||| ||||||| | ||||||||||| ||||||||||||||||||     
T  8611602 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcatatcagcttcgatccagtgcagatccaatcaata 8611503  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||||||||||||| |||| | | ||||||| | || |||||| |||||||||||||  ||||||| ||| |||||||||    
T  8611502 actttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggtatttgtactttgccgttttatg 8611406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 37399734 - 37399930
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||||||||| |||||  |||| ||||||| | ||||||| ||||| ||  |||||||||| |||||||||||||||||||    
T  37399734 tcgtctttgtgcgacgttgtttgtctttcttgtttctttcaagtatttgattgattcaaattgtccgattagcttcgatccagtgcagatccaatcaatg 37399833  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||| |  | |||||| || || ||||||||| | | |||  || | || |||||| |||||||||||| | ||||||| |||||||||||||    
T  37399834 actttgacgtcatccacgttacaaattcggagacatggttattcatgagatttaaatatagtcatatgtgtagacatttgtactttgtcgttttatg 37399930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 7986015 - 7986224
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||| | |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||| | ||||||||||| ||||||    
T  7986015 gttggtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgtttctctcaggtatttgatccgttcagattgtcaaatcagcttcgatccagtgca 7986114  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||||| |  | ||||||||||||||| | |||| | | |||| || | || |||||| || || |||||| | ||||||| |||    
T  7986115 gatccaatcaatgactttgacgtcatccacgttgcagatccgaatacatggttattccggagatttaaatatagtcctaagtgtagacatttgtactttg 7986214  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  7986215 tcgttttatg 7986224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 495
Target Start/End: Original strand, 46918524 - 46918731
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||| |||||||||||||| |||||||||| ||| |||||  |||||| ||||||||| |||| ||||||||| |||||| |||| | ||||     
T  46918524 ttggtttgtttgtcgtctttgtgcggtgttgtttgtcattcttgtttcgttcagg-atttgttcggttcagattgtcagatcagcttagatccaatgcaa 46918622  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    || ||||||||||||||    || | || ||||||||||| |||||||  || ||   || ||||||||||| |||||||| ||||||||||||| |||     
T  46918623 attcaatcaatgactttagtgttgtgcatgttgcagatccagagacatgagtattttggagacttgaatatagtcatatgtataggcttttgtactttgc 46918722  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  46918723 cgttttatg 46918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 49167061 - 49167257
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||    |||||||||| ||| |||| ||||| ||| ||||||||||| |||||||||| ||||||||    
T  49167061 tcgtctttgtgcgacgttgtttgtttttcttgtttctcccaggtatttgatcgcttcagattgttagatcagcttcgatccagtgcagatctaatcaatg 49167160  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||  | |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  49167161 actttagcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 49167257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 287 - 496
Target Start/End: Complemental strand, 135136 - 134926
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||| |||||||| |||||||||  |||| |||||   | ||||||||| ||| |||| ||||||| | ||||||||||| ||||||    
T  135136 gttggtttgttcgtcgtttttgtgcgacgttgtttgattttcttgtttctcttaggtatttgatcggttcagattgtcaaatcagcttcgatccagtgca 135037  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | ||||||||||||| |||||||| | | || |  ||| || |||||| |||||||||||||| | ||||||||     
T  135036 gatccaatcaatgactttggcgtcatccacgttgcagatctggagacatggttatttcgaatatttaaatatagtcatatgtgtaggcatctgtaccttt 134937  T
Q  486 tcgttttatgt 496  Q
    ||| |||||||    
T  134936 tcgctttatgt 134926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 8319438 - 8319647
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||  | ||||||||||||| |||||   ||||| ||||| ||| |||| ||||| ||| |||||| |||| ||||||    
T  8319438 gttggtttgttcgtcgtctttgtgcaaccttgtttgtctttcttgtttctctcaggcatttgatcggttcagattgttagatcagctttgatccagtgca 8319537  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    || |||||||||||||||| | |  | |||||||||||||||||||||| | |||||| || | |||||||||  |||||||| | || ||||||  |||    
T  8319538 gacccaatcaatgactttggcgtcatccacgttgcagatccggagacatggttgttccggagatttgaatatagccatatgtgcatgcatttgtaatttg 8319637  T
Q  486 tcgttttatg 495  Q
    || |||||||    
T  8319638 tcattttatg 8319647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 495
Target Start/End: Complemental strand, 21329282 - 21329080
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| ||| |||||||||  |||||||||||||  |  ||| ||||||| ||||||| ||||| ||||||||| || ||||||||||||||||||||    
T  21329282 tttgtttgtcgactttgtgcgatgttgtttgtcttt--tcctttgttcaggtgtttgttcaattcagattgtcagatcaacttcgatctagtgcagatcc 21329185  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    || ||||||||||| | || |  ||||||||||||||| | |||   | ||||||||| || |||||| |||||| ||||||||| || || ||| ||||    
T  21329184 aaccaatgactttggcgttatcaacgttgcagatccgggggcatgactattccagatattttaatatagtcatatttgtaggcttgtgcactttgccgtt 21329085  T
Q  491 ttatg 495  Q
    |||||    
T  21329084 ttatg 21329080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 496
Target Start/End: Original strand, 40476843 - 40477040
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  40476843 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagattgtcagatcagcttcgatcaagtgcagatccaatcaatg 40476942  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |||||||| |  | ||||||| ||||||||| | ||   | |||| || | || |||||| | |||||||||| | ||||||| ||| ||||||||||    
T  40476943 actttgacgtcatccacgttgtagatccggaaatatgattattccggagatttaaatatagtaatatgtgtagacatttgtactttgccgttttatgt 40477040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 42490826 - 42491035
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  | | ||||||||| | |||||||| |||| |||||   ||||||||||| ||| |||| | ||||||| ||||||||||||||||||    
T  42490826 gttggtttgttcgttgcctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagactgtcagatcagcttcgatctagtgca 42490925  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||| ||||||||| || | |  | |||||||||||||||||||||  | | |||| |||| || |||||| | |||||||||| | ||||||| |||    
T  42490926 gatccagtcaatgactgtggcgtcatccacgttgcagatccggagacacggttattccggatatttaaatatagtaatatgtgtagacatttgtactttg 42491025  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  42491026 ccgttttatg 42491035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 47749857 - 47750066
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||| ||||||| ||||||    
T  47749857 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagtttcgatccagtgca 47749956  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||| ||||||| | |    | || |||||||||| |||||||| | | ||||  | | || |||||| |||||||||||||| ||||||| |||    
T  47749957 gatccaatcgatgacttcggcggcatccatgttgcagatctggagacatggttattccgaagatttaaatatagtcatatgtgtaggcatttgtactttg 47750056  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  47750057 ccgttttatg 47750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 491
Target Start/End: Complemental strand, 5025034 - 5024842
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||  ||||| | ||| ||| ||||||||||||| |||| ||||||||| ||| ||||||| ||| |||||| ||||||||    
T  5025034 tcgtctttgtgcgacgttgttttcctttcttatttcatttaggtatttgttcggttcagattgtcagatcagattcgatccagtccagatcaaatcaatg 5024935  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttt 491  Q
    ||||||   |  |  | ||||||||||||||||||||||| |||  || |||| |||||| ||| ||||||||||||| |||  |||||||||    
T  5024934 actttggagtcgtcaatgttgcagatccggagacataggtattctggagacttaaatatagtcaaatgtgtaggctttagtattttgtcgttt 5024842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 11001979 - 11002175
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||  |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||  |||||||||| ||||||||    
T  11001979 tcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgattcagtgcagatctaatcaatg 11002078  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  ||||||||| ||||||| | |||| | | |||| || | || |||||| |||||||||||||| ||||||| ||| | |||||||    
T  11002079 actttggcgtcattcacgttgtagatccgaaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccattttatg 11002175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 495
Target Start/End: Complemental strand, 29804661 - 29804461
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| ||||||||||||| |||||||| | |||    | || ||||||| ||||||||||||| ||| ||||| |||||||||||   |||||||||    
T  29804661 tttgtttgtcgtctttgtgcgacgttgttttttttt----tcttgttcaggtgtttgttcgattcagattatcagatcagcttcgatccgatgcagatcc 29804566  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    || ||||||||||| |||  |  ||||||||||||||||| ||| | | |||| |||| || |||||| |||||| ||||||||| ||||| ||| ||||    
T  29804565 aaccaatgactttggcatcatcaacgttgcagatccggaggcatggctattccggatatttaaatatagtcatatttgtaggcttatgtactttgccgtt 29804466  T
Q  491 ttatg 495  Q
    |||||    
T  29804465 ttatg 29804461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 24470529 - 24470634
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  24470529 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagattcaatcaatg 24470628  T
Q  399 actttg 404  Q
    ||||||    
T  24470629 actttg 24470634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 24475477 - 24475582
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  24475477 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagattcaatcaatg 24475576  T
Q  399 actttg 404  Q
    ||||||    
T  24475577 actttg 24475582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 303 - 495
Target Start/End: Original strand, 39090227 - 39090420
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    |||||||||| ||||||||||||||| |||||  |||||||||||||||| |||| ||||||| | ||||||||||| |||||| ||| | |||||||||    
T  39090227 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcatatcagcttcgatccagtgcaaatcaattcaatgact 39090326  T
Q  402 ttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||   |  |  | ||||||||| | |||||||  || || |||  |||| |||||| ||||||||||||||||| |||| ||| | |||||||    
T  39090327 ttggagtcatcaatgttgcagattcagagacatgagtattacagtgacttaaatatagtcatatgtgtaggctttagtactttgccattttatg 39090420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 495
Target Start/End: Complemental strand, 22379602 - 22379491
Alignment:
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    |||||||| |||||||||||||||| ||  |||||||||||||| ||||||  || ||||||| ||||||||||| ||||||||| ||| |||| ||| |    
T  22379602 cagatccagtcaatgactttgacatcttcaacgttgcagatccgaagacatgagtattccagagacttgaatatagtcatatgtgcaggtttttttactt 22379503  T
Q  484 tgtcgttttatg 495  Q
    || |||||||||    
T  22379502 tgccgttttatg 22379491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 10250474 - 10250356
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||| ||||||||||||||||  | |||  |||||| ||||||||  |||| ||||||||| ||||||||||| ||||||    
T  10250474 gttgttttgttcgtcgtctttgtgtggcgttgtttgtcttttttatttcgttcaggaatttgttccgttcagattgtcagaacagcttcgatcgagtgca 10250375  T
Q  386 gatccaatcaatgactttg 404  Q
    |||| ||||||||||||||    
T  10250374 gatcaaatcaatgactttg 10250356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 495
Target Start/End: Complemental strand, 41748504 - 41748309
Alignment:
Q  301 cgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatga 399  Q
    |||||| ||||| ||||||||||||||| |||||| ||  |||||||||||| |||| || |||||| || |||||||| | |||||||| |||||||||    
T  41748504 cgtcttagtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagatcgtcagatcaacttcgatcaaatgcagatcaaatcaatga 41748405  T
Q  400 ctttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||   |  |  || | ||||||| |||||||  ||| |||| || |||| |||||| | ||||||||||| ||| |||| ||| |||||||||    
T  41748404 ctttggagtcatcaacatcgcagatctggagacaagggtattccggagacttaaatatagttatatgtgtaggttttagtactttgccgttttatg 41748309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 434
Target Start/End: Original strand, 9933970 - 9934114
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||| ||||   |||||||| |||||  |||||||||||||| |||||| ||||||||| |||||| |||| ||||||    
T  9933970 gttgttttgttcgtcgtctttgtgcgacgtt---tgtctttcttgtttcgttcaggtatttgtt-gattcagattgtcagatcagctttgatccagtgca 9934065  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    |||| ||||||||||||||   |  |  |||||||||||||||||||||    
T  9934066 gatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacat 9934114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 470
Target Start/End: Original strand, 39707501 - 39707591
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgta 470  Q
    |||||||||||||||||||||||||||||  || |||||||| ||||||||||||  || |||| || |||||||||||||| ||| ||||    
T  39707501 agtgcagatccaatcaatgactttgacatcattaacgttgcatatccggagacatgagtattccggagacttgaatataatcgtatttgta 39707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 496
Target Start/End: Original strand, 47156580 - 47156718
Alignment:
Q  358 attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat 457  Q
    ||||||| | || |||||||  |||||||||| ||||||||||||||  ||  | ||||||||||||||||| |||| | | |||| || | || |||||    
T  47156580 attgtcatatcaacttcgatacagtgcagatctaatcaatgactttggtatcatccacgttgcagatccggaaacatggttattccggagatttaaatat 47156679  T
Q  458 aatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    | |||||||||||| | ||||||| ||||||||||||||    
T  47156680 agtcatatgtgtagacatttgtactttgtcgttttatgt 47156718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 36350304 - 36350499
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||| ||| | ||||||||||||||  |||||  ||||| ||||||||||| | | ||||||| | |||||| |||  ||||| |||||||||||||    
T  36350304 tcgtcttagtgtgacgttgtttgtcttttttgtttggttcagatatttgttcgacttagattgtcatatcagctttgattcagtgcggatccaatcaatg 36350403  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     ||||| | |  |  ||||||||||| ||||||||||| | |||  || ||||||||||  | ||||||||||| |||||||| ||||| |||||||    
T  36350404 gctttggcgtcgtcaacgttgcagattcggagacatag-tattctggagacttgaatatggttatatgtgtaggtttttgtactttgtcattttatg 36350499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 291 - 397
Target Start/End: Complemental strand, 24045267 - 24045160
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatc 389  Q
    |||||||  ||||||||||| ||| |||||||| |||| ||||||  ||| ||||||| |||||||| ||||||||| || ||| ||||||||||||||     
T  24045267 gtttgttcgtcgtctttgtgtggcattgtttgtatttcttgttttgctcatgtatttgatcgattcagattgtcagatcaacttagatctagtgcagatt 24045168  T
Q  390 caatcaat 397  Q
    ||||||||    
T  24045167 caatcaat 24045160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 480
Target Start/End: Complemental strand, 33530423 - 33530272
Alignment:
Q  330 tgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccgg 428  Q
    |||||| |||| ||||||||||| |||| ||||||| | |||||| |||| |||||| ||||||||||||| |||| | |  |  ||||||||||||| |    
T  33530423 tgttttgttcatgtatttgttcggttcagattgtcaaatcagcttagatccagtgcaaatccaatcaatgaatttggcgtcatcaacgttgcagatcctg 33530324  T
Q  429 agacataggtgttccagatacttgaatataatcatatgtgtaggcttttgta 480  Q
    ||||||  || || | || ||||||||||| ||||| ||||||| |||||||    
T  33530323 agacatgagtatttcggagacttgaatatagtcataagtgtaggtttttgta 33530272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 495
Target Start/End: Original strand, 43483769 - 43483920
Alignment:
Q  345 tttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttcc 443  Q
    |||||||| |||| ||||||| | |||| |||||| |||||| ||| |||||||||||||    |  |  |||||||||||||||||||| |||| ||||    
T  43483769 tttgttcggttcagattgtcaaatcagcatcgatccagtgcatatcaaatcaatgacttttgagtcatcaacgttgcagatccggagacaaaggtattcc 43483868  T
Q  444 agatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     || || | |||||| |||||||||||||||||  ||| |||||||||||||    
T  43483869 ggagacataaatatagtcatatgtgtaggctttaatactttgtcgttttatg 43483920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 13008664 - 13008594
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca 357  Q
    |||||||||||  ||||||||||||||||||||||||||||| | |||  |||||||||||||||| ||||    
T  13008664 gttggtttgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgttcaggtatttgttcggttca 13008594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 22751561 - 22751666
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||||||| |||||||||||||| ||||| |||||  ||||  |||||||||  |||| ||||||||| ||||||||||| | ||||    
T  22751561 gttggtttgttcgtcgtctttatgcggcgttgtttgcctttcttgtttcgttcaactatttgttcagttcagattgtcagatcagcttcgatccaatgca 22751660  T
Q  386 gatcca 391  Q
    ||||||    
T  22751661 gatcca 22751666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 403
Target Start/End: Complemental strand, 35135174 - 35135058
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||| |||||||| |||||||| | ||| ||||||| | || |||  ||||| || ||||| | ||||||||| ||||||    
T  35135174 gttggtttgttc-tcgtctttgtgtggcgttgtctgtctttcctatttcattcaggaaattattcagttcaaattatcagatcggcttcgatcaagtgca 35135076  T
Q  386 gatccaatcaatgacttt 403  Q
    ||||||||||||||||||    
T  35135075 gatccaatcaatgacttt 35135058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 492
Target Start/End: Complemental strand, 38649343 - 38649143
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatcca 391  Q
    ||||||| ||||||||||||| ||||||||| ||||| | |||  |||| |||||||||||||   ||||| ||| ||||||||||| | |||| ||| |    
T  38649343 tttgtttgtcgtctttgtgcgacgttgtttgcctttcttttttcgttcaagtatttgttcgatcagattgttagatcagcttcgatcca-tgcatatcaa 38649245  T
Q  392 atcaatgactttgacatttttcacgttgcagatccgg-agacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    |||||||||||||   |  |  || ||| ||||| || |||||| ||| |||| || |||| |||||| ||||||||||| ||||| |||| ||| ||||    
T  38649244 atcaatgactttggagtcgtcaacattgtagatctggaagacatgggtattccggagacttaaatatagtcatatgtgtaagctttagtactttgccgtt 38649145  T
Q  491 tt 492  Q
    ||    
T  38649144 tt 38649143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 495
Target Start/End: Complemental strand, 45949598 - 45949461
Alignment:
Q  358 attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat 457  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||| | |  |  ||||||||||||||||| |||   | |||| || | || |||||    
T  45949598 attgtcatatcagcttcgatcaagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgactattccggagattttaatat 45949499  T
Q  458 aatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | |||||| ||||||||| ||||| |||  ||||||||    
T  45949498 agtcatatttgtaggcttatgtactttgctgttttatg 45949461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 16273588 - 16273700
Alignment:
Q  369 agcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtg 468  Q
    |||||| ||| |||||||||| ||||||||||| ||   |  |  ||||||||||||||||||||| | | |||| || |||| ||||||||||||||||    
T  16273588 agcttctatcaagtgcagatcaaatcaatgactctggactcgtcaacgttgcagatccggagacatggatattccggagacttaaatataatcatatgtg 16273687  T
Q  469 taggcttttgtac 481  Q
    |||||||| ||||    
T  16273688 taggctttagtac 16273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 19895647 - 19895527
Alignment:
Q  315 gttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttc 413  Q
    ||||||||| |||| |||||   ||||||||||| ||| |||| ||||||| | ||||||||||| ||||||||| ||||||||||||||| | |  | |    
T  19895647 gttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatcc 19895548  T
Q  414 acgttgcagatccggagacat 434  Q
    |||||| |||| |||||||||    
T  19895547 acgttgtagattcggagacat 19895527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 492
Target Start/End: Original strand, 32944128 - 32944207
Alignment:
Q  413 cacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtttt 492  Q
    ||||||| ||||||| ||||||  || ||  |||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  32944128 cacgttggagatccgaagacatgagtattttagatacttgaatataatcatatgtgtagacttttgtactttgtcatttt 32944207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 496
Target Start/End: Original strand, 22751657 - 22751735
Alignment:
Q  418 tgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||||||||| ||||||||| | |||| || | ||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  22751657 tgcagatccagagacatagcttttccggagaattgaatatagtcatatgtgtaggcttttgtactttaccgttttatgt 22751735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 23177561 - 23177511
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgtt 350  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  23177561 tcgtctttgtgcggcgttgtctgtctttcttgttttgttcaggtatttgtt 23177511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 34594513 - 34594395
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||||| | ||||||||||||  | | || |||| || |||||||  ||||| || ||| | ||||||| ||||||||||    
T  34594513 gttgttttgtttgtcgtctttgtgcgacattgtttgtcttttctctcttgttcaagtgtttgttcagttcaaattatcatatcagcttcaatctagtgca 34594414  T
Q  386 gatccaatcaatgactttg 404  Q
    ||||||| |||||||||||    
T  34594413 gatccaaccaatgactttg 34594395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 481
Target Start/End: Complemental strand, 35363016 - 35362903
Alignment:
Q  368 cagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgt 467  Q
    |||||| |||| |||||| || ||||||||||||||||  |  |  ||||||||||| || |||||| | | || | || ||||||||||||||||||||    
T  35363016 cagctttgatccagtgcaaatacaatcaatgactttgatgtcgtcaacgttgcagattcgaagacatggatatttcggagacttgaatataatcatatgt 35362917  T
Q  468 gtaggcttttgtac 481  Q
    |||| |||||||||    
T  35362916 gtagccttttgtac 35362903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 40657840 - 40657945
Alignment:
Q  393 tcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatact----tgaatataatcatatgtgtaggcttttgtaccttgtcg 488  Q
    |||||||||||| | || | |||||||||||||||||||||||| | |||| || |||    | |||||||||||||||||| || |||||||  |||||    
T  40657840 tcaatgactttggcgttatccacgttgcagatccggagacatagttattccggagacttaaataaatataatcatatgtgtatgcatttgtactctgtcg 40657939  T
Q  489 ttttat 494  Q
    ||||||    
T  40657940 ttttat 40657945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 25855211 - 25855093
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttat-tcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgc 384  Q
    |||||||||||  ||||||||||||| |||| | ||| |||| | |||| | ||||||||||| ||| ||||  ||||||||  |||||||||| |||||    
T  25855211 gttggtttgttcgtcgtctttgtgcgacgttatatgtttttc-tattttctctcaggtatttgatcggttcaggttgtcagattagcttcgatccagtgc 25855113  T
Q  385 agatccaatcaatgactttg 404  Q
    | ||||||||||||||||||    
T  25855112 aaatccaatcaatgactttg 25855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 495
Target Start/End: Original strand, 2532136 - 2532273
Alignment:
Q  358 attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat 457  Q
    ||||||||| || |||||||| ||||||||||||| ||||||||||| | |  |  ||||||||||||||||| ||| | | |||| || | || |||||    
T  2532136 attgtcagatcatcttcgatccagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatggctattccggagaatttaatat 2532235  T
Q  458 aatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | | |||| ||||||||  ||||| ||  |||||||||    
T  2532236 agttatatttgtaggctaatgtacttttccgttttatg 2532273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 400
Target Start/End: Complemental strand, 37890455 - 37890366
Alignment:
Q  312 ggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgac 400  Q
    |||||||||||| |||| |||||  |||| ||||||||||| |||| ||||||||| |||||| ||||   |||||||||| ||||||||    
T  37890455 ggcgttgtttgtttttcttgtttcgttcacgtatttgttcgtttcagattgtcagatcagctttgatccgctgcagatccagtcaatgac 37890366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 496
Target Start/End: Complemental strand, 35135030 - 35134982
Alignment:
Q  448 acttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||||||||||| |||||||||||  ||||||||| ||||||||||||||    
T  35135030 acttgaatatagtcatatgtgtaaacttttgtactttgtcgttttatgt 35134982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 472
Target Start/End: Original strand, 45482321 - 45482379
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtagg 472  Q
    |||||||||||||||||||||  || |||| || ||||||||||| |||||| ||||||    
T  45482321 acgttgcagatccggagacatgagtattccggagacttgaatatagtcatatttgtagg 45482379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 471
Target Start/End: Original strand, 9137207 - 9137264
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtag 471  Q
    |||||||||||||||||||||| || |||| || |||||||| || |||||| |||||    
T  9137207 acgttgcagatccggagacataagtattccggagacttgaatttagtcatatttgtag 9137264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 32312690 - 32312803
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||   |||||| |||||||   | || |||| || |||||| |||||| ||||||| | ||||||||||| ||||||    
T  32312690 gttgttttgttcgtcgtctttgtgcaatgttgttagtctttctcatcttgttcatgtgtttgtttgattcatattgtcatatcagcttcgatcaagtgca 32312789  T
Q  386 gatccaatcaatga 399  Q
     |||||||||||||    
T  32312790 tatccaatcaatga 32312803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 37375910 - 37375829
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||| ||||||||  || |||  || || |||||||| |||||| ||||||| | ||||| |||||||||||||    
T  37375910 acgttgcagatctggagacatgagtattcaggagacatgaatatagtcatatttgtaggcatatgtactttgtcgttttatg 37375829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 44482737 - 44482656
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||||  || |||| || || | |||||| |||||| ||||||| | ||||| ||| |||||||||    
T  44482737 acgttgcagatccggagacatgagtattccggagacattaatatagtcatatttgtaggcatatgtactttgccgttttatg 44482656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 9934122 - 9934154
Alignment:
Q  368 cagcttcgatctagtgcagatccaatcaatgac 400  Q
    |||||||||||||||||||||| ||||||||||    
T  9934122 cagcttcgatctagtgcagatcaaatcaatgac 9934154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 14734040 - 14734000
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtcttt 327  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    
T  14734040 gttgttttgtttgtcgtctttgtgcgacgttgtttgtcttt 14734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 465
Target Start/End: Original strand, 32643224 - 32643276
Alignment:
Q  413 cacgttgcagatccggagacataggtgttccagatacttgaatataatcatat 465  Q
    ||||||||||||||||||||||  |  |||| || ||||||||||||||||||    
T  32643224 cacgttgcagatccggagacatgaggattccggagacttgaatataatcatat 32643276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 5517 - 5308
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||| | ||||||||||| ||||||    
T  5517 gttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcatattgtcatatcagcttcgatccagtgca 5418  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| ||||||||||||||  ||||||||||    
T  5417 gatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtaggcacttgtaccttg 5318  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  5317 ccgttttatg 5308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 41996668 - 41996875
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||  ||||||||| || ||   ||||||||||| ||| |||| ||||||||| ||||||||||  ||||||    
T  41996668 gttggtttgttcgtcgtctttgtgcgacgtt--ttgtctttcttgattctctcaggtatttgatcggttcagattgtcagatcagcttcgattcagtgca 41996765  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | |||||||||||||||||||||||| | |||| || | || |||||| |||||||||||||| |||||||||||    
T  41996766 gatccaatcaatgactttggcgtcatccacgttgcagatccggagacatagctattccggagatttaaatatagtcatatgtgtaggcatttgtaccttg 41996865  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  41996866 tcgttttatg 41996875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 5457194 - 5457403
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    ||||||| |||  ||||||| ||||| ||||||||||||||| |||||   ||| ||||||| ||| |||| ||||||||| ||||||||||||||||||    
T  5457194 gttggttagttcgtcgtcttcgtgcgacgttgtttgtctttcttgtttctctcaagtatttgatcggttcagattgtcagatcagcttcgatctagtgca 5457293  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||| |||||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| |||||||||||| | |||||||||||    
T  5457294 gatccaatcaataactttgccgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtagccatttgtaccttg 5457393  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  5457394 tcgttttatg 5457403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 8054798 - 8054590
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  8054798 gttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 8054699  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | ||| |||||||||||||||||| | | ||||  | | || |||||| |||||||||||||| |||||||||||    
T  8054698 gatccaatcaatgactttggcgtcatccac-ttgcagatccggagacatggctattccgaagatttaaatatagtcatatgtgtaggcatttgtaccttg 8054600  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  8054599 ccgttttatg 8054590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 304 - 496
Target Start/End: Complemental strand, 12244190 - 12243997
Alignment:
Q  304 ctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactt 402  Q
    ||||||||||||||||||||| ||  |||||  ||||||||||||||||||||| ||||||| | |||||| |||| | |||||||||||||||||||||    
T  12244190 ctttgtgcggcgttgtttgtcgtttttgtttcgttcaggtatttgttcgattcagattgtcatatcagctttgatccaatgcagatccaatcaatgactt 12244091  T
Q  403 tgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |||  |  |  | ||||||| |||||||| || ||| ||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  12244090 tgatgtcgtcaatgttgcagttccggagatatgggtattccagagacttgaatatagttatatgtgtaggcttttgtactttgtcgttttatgt 12243997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 300 - 496
Target Start/End: Complemental strand, 3925668 - 3925471
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| | ||||||| ||||| ||||| |||||||||||||||||||||| || |||||| ||||||||||| |||||||||| ||||||||    
T  3925668 tcgtctttgtgcgaccttgtttgcctttcttgtttcattcaggtatttgttcgattcagatagtcagatcagcttcgatcaagtgcagatcaaatcaatg 3925569  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||||||   |  |  |||||||||||  ||||||||  || |||| || |||| |||||||||||||||||||||||| |||| ||| ||||||||||    
T  3925568 actttggagtcgtcaacgttgcagatttggagacatgagtattccggagacttaaatataatcatatgtgtaggctttagtactttgccgttttatgt 3925471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 285 - 496
Target Start/End: Complemental strand, 32256714 - 32256502
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||| |||||| ||| |||||||||||| || | ||||| | | |||||||||||  |||    
T  32256714 atgttgttttgtttgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggtttagattgttaaatcagcttcgatcatgtg 32256615  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    |||||| ||||||||||||||   |  |  ||||||||||||||||||||  ||| |||| || |||| |||||| |||||||||| |||||| |||| |    
T  32256614 cagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccggagacttaaatatagtcatatgtgtcggctttagtactt 32256515  T
Q  484 tgtcgttttatgt 496  Q
    || ||||||||||    
T  32256514 tgccgttttatgt 32256502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 287 - 494
Target Start/End: Original strand, 44295439 - 44295647
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||||| ||||||||||| ||||||    
T  44295439 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgca 44295538  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||||| |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||| |||||||  |||||| |||    
T  44295539 gatccaatcaatgactttgacgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatatgtaggcaattgtactttg 44295638  T
Q  486 tcgttttat 494  Q
     ||||||||    
T  44295639 ccgttttat 44295647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 32104829 - 32104619
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||| || |||||||||  ||||||||||||||| |||||   ||||||||||| ||| |||| ||||||||| ||| ||||||| ||||||    
T  32104829 gttggtttgtttgtcatctttgtgcaacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagtttcgatccagtgca 32104730  T
Q  386 gatccaatcaatgactttga-catttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacctt 484  Q
    ||| |||||||| ||||||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| ||||||||||| || ||||||||||    
T  32104729 gattcaatcaataactttgaccgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtatgcatttgtacctt 32104630  T
Q  485 gtcgttttatg 495  Q
    | |||||||||    
T  32104629 gccgttttatg 32104619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 317 - 495
Target Start/End: Original strand, 37719993 - 37720172
Alignment:
Q  317 tgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcac 415  Q
    |||||||||||| |||||  ||| |||||||||||| || | | | |||||||| |||||||| |||||||||| |||||| ||||||| | |  |  ||    
T  37719993 tgtttgtctttcttgtttcgttcgggtatttgttcggtttagaatatcagaccaacttcgatccagtgcagatctaatcaaagactttggcttcatcaac 37720092  T
Q  416 gttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||||| ||||||||||| ||||  | ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  37720093 gttgcagatccagagacataggtattccgtagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatg 37720172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 292 - 495
Target Start/End: Complemental strand, 16937325 - 16937121
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    |||||| |||||||||||||| | ||||||| ||||| |||||  ||||||||||||||   |||| ||||||||| ||||||||||| |||||| |||     
T  16937325 tttgttcatcgtctttgtgcgacattgtttgcctttcgtgtttcgttcaggtatttgtttagttcagattgtcagatcagcttcgatccagtgcatatca 16937226  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    ||||||||||||||   |  |  ||||||||||||  ||||||| ||| |||| || |||| |||||| ||||||||||||||||| |||| |||| |||    
T  16937225 aatcaatgactttggagtcgtcaacgttgcagatctagagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgttgtt 16937126  T
Q  491 ttatg 495  Q
    |||||    
T  16937125 ttatg 16937121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 37129653 - 37129457
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| | |||||||| |||| |||||   |||||||||||  || |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  37129653 tcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgaacgcttcagattgtcagatcagcttcgatcaagtgcagatccaatcaatg 37129554  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||||||||||||| |||| | | ||||  | | || |||||| |||||||||||||| ||||||| ||| |||||||||    
T  37129553 actttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagtcatatgtgtaggcatttgtactttgacgttttatg 37129457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 302 - 495
Target Start/End: Original strand, 10042910 - 10043103
Alignment:
Q  302 gtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatgac 400  Q
    ||||| ||||| |||| |||||||||| |||||  |||||||||||||||  ||||| |||||||| |||||||||||||||||||||| ||||||| ||    
T  10042910 gtcttagtgcgacgttatttgtctttcttgtttcgttcaggtatttgttcagttcaaattgtcagatcagcttcgatctagtgcagatcaaatcaataac 10043009  T
Q  401 tttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||   |  |  |||||||||||||||||||||  || |||| || |||| |||||| | ||||||||| ||||| |||| |||||||||||||    
T  10043010 tttggagtcgtcaacgttgcagatccggagacatgtgtattccggagacttaaatatagttatatgtgta-gctttagtactttgtcgttttatg 10043103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 300 - 496
Target Start/End: Complemental strand, 12248692 - 12248492
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtca---gaccagcttcgatctagtgcagatccaatca 395  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||| |||   || || |||||| | |||||||||| |||||    
T  12248692 tcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagattatcagatgatcaacttcgaaccagtgcagatcaaatca 12248593  T
Q  396 atgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||   |  |  || |||||||| | ||||||| ||| ||||||| |||| |||||| ||||||||||||||||| |||  ||| |||||||||    
T  12248592 atgactttggagtcgtcaactttgcagattcagagacatgggtattccagagacttaaatatagtcatatgtgtaggctttagtattttgccgttttatg 12248493  T
Q  496 t 496  Q
    |    
T  12248492 t 12248492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 293 - 458
Target Start/End: Original strand, 15665668 - 15665834
Alignment:
Q  293 ttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcca 391  Q
    |||||| |||||||||||| ||||||||||||| || |||||| |||||||||||||||| |||| ||||||||  |||||| |||| ||||||||||||    
T  15665668 ttgtttgtcgtctttgtgcagcgttgtttgtctatcctgttttgttcaggtatttgttcggttcagattgtcaggtcagcttagatccagtgcagatcca 15665767  T
Q  392 atcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatata 458  Q
    |||||||||||||   |  |   |||||||||||||||||||| ||| || | || |||||||||||    
T  15665768 atcaatgactttggtgtcatcagcgttgcagatccggagacatgggtatttcggagacttgaatata 15665834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 26937648 - 26937765
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||| ||||||||||||||||||||||||| |||||  ||||||||||| |||| |||| ||||||||| |||||| |||||||||||    
T  26937648 gttggtttgttcgtcgactttgtgcggcgttgtttgtctttcttgtttcgttcaggtatttattcggttcagattgtcagatcagctttgatctagtgca 26937747  T
Q  386 gatccaatcaatgacttt 403  Q
     |||||||||||||||||    
T  26937748 aatccaatcaatgacttt 26937765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 490
Target Start/End: Original strand, 13977558 - 13977735
Alignment:
Q  314 cgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacattttt 412  Q
    ||||||||||||||| |||||  ||||||||||||  || |||| ||| ||||| || |||||||  |||||| || ||||||| |||||||||||  |     
T  13977558 cgttgtttgtctttcttgtttcgttcaggtatttgaccggttcagattatcagatcaacttcgattcagtgcaaattcaatcaacgactttgacatcgtc 13977657  T
Q  413 cacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
     |||||||||||||||||| ||  || |||  || ||||||||||||||||||||| |||||||||||||||| ||||    
T  13977658 aacgttgcagatccggagatatgagtattctggagacttgaatataatcatatgtgcaggcttttgtaccttgccgtt 13977735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 16996867 - 16996671
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||  | ||||||||| |||||||||||||||||||    
T  16996867 tcgtctttgtgcgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattgtcagttcggcttcgatccagtgcagatccaatcaatg 16996768  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||||| ||| | | |||| | | |||| |||| || |||||| |||||| ||||||| ||||||| ||| |||||||||    
T  16996767 actttggcgtcatccacgttgcaaatctgaaaacatggttattccggatatttaaatatagtcatatatgtaggcatttgtactttgccgttttatg 16996671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 292 - 495
Target Start/End: Complemental strand, 18197132 - 18196928
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| |||||||||| |||  ||||||||||| |  || || ||||||| ||||||| |||||| || || || | | |||||||||||||||||||    
T  18197132 tttgtttgtcgtctttgttcggtattgtttgtcttcctcgtcttgttcaggtgtttgttcaattcaaattttcggatcggtttcgatctagtgcagatcc 18197033  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    || ||||||||||||| |  |  ||||||||||||||||||||| | | ||||| | |||| |||||| |||||| ||||| ||| ||||| ||| ||||    
T  18197032 aaccaatgactttgacgtcgtcaacgttgcagatccggagacatcgctattccaaagactttaatatagtcatatttgtagtcttctgtactttgccgtt 18196933  T
Q  491 ttatg 495  Q
    |||||    
T  18196932 ttatg 18196928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 292 - 495
Target Start/End: Original strand, 32061922 - 32062126
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| ||||||||||||| | ||||||||||||    | || ||||||| |||||||| |||| ||||||||| ||||||||||| |||||||||||    
T  32061922 tttgtttgtcgtctttgtgcgacattgtttgtcttttccctcttgttcaggtgtttgttcggttcagattgtcagatcagcttcgatcaagtgcagatcc 32062021  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    || ||||||||||| | |  |  ||||||||||||||||| ||| | | ||||| | | || |||||| |||||| |||| |||| || || ||||||||    
T  32062022 aaccaatgactttggcgtcatcaacgttgcagatccggaggcatggctattccaaagattttaatatagtcatatttgtatgcttatgcactttgtcgtt 32062121  T
Q  491 ttatg 495  Q
    |||||    
T  32062122 ttatg 32062126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 285 - 481
Target Start/End: Complemental strand, 15237631 - 15237441
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||| ||  |||||||||||||| ||||||||||||    ||||| |||| ||||||||| | |||| ||||| |||  |||||| |||| |||    
T  15237631 atgttggtttcttcgtcgtctttgtgcggtgttgtttgtctt----gttttgttcaagtatttgtttggttcagattgttagattagcttccatctggtg 15237536  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    ||||| |  | ||||||||||   |  ||||||||||| || ||||||||||| | || |||| ||||||||||||||||||||||||||||||||||    
T  15237535 cagattccttaaatgactttg---tagttcacgttgcaaattcggagacatagatatttcagagacttgaatataatcatatgtgtaggcttttgtac 15237441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 32412913 - 32413031
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    ||||||||||| ||||||||||||||  ||||||||| |||| |||||  |||||||||||| | | |||| ||||||||| |||||||||||  |||||    
T  32412913 gttggtttgttcatcgtctttgtgcgatgttgtttgtttttcttgtttctttcaggtatttgattggttcagattgtcagatcagcttcgatcctgtgca 32413012  T
Q  386 gatccaatcaatgactttg 404  Q
    |||||||||||||||||||    
T  32413013 gatccaatcaatgactttg 32413031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 7269455 - 7269248
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||  | ||||||||||||| ||||| || || ||||||||||| || | ||||||| | | ||||||| ||||||||    
T  7269455 gttggtttgttagtcgtctttgtgcaacattgtttgtctttcttgtttcatgcaagtatttgttcggtttagattgtcatatctgcttcga-ctagtgca 7269357  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||| || || ||||||||| | |  | || ||||||||||||||||||| ||| |||| |||||||||||||| | | ||| ||||| |||||||| |||    
T  7269356 gattcattctatgactttg-cgtcgtccatgttgcagatccggagacatgggtattccggatacttgaatatagttacatgagtaggtttttgtactttg 7269258  T
Q  486 tcgttttatg 495  Q
    | ||||||||    
T  7269257 ttgttttatg 7269248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 285 - 481
Target Start/End: Complemental strand, 31713069 - 31712872
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||| ||||||  ||||||||||||| ||||||||||||||| || ||  || ||||||||||||| |||| ||||||| | ||||||||||| ||||    
T  31713069 atgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcagcttcgatccagtg 31712970  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtac 481  Q
    |||||| ||||||||||||||   |  |  | |||||||||  ||||||||  || |||| |  |||| |||||| ||||||||||||||||| ||||    
T  31712969 cagatcaaatcaatgactttggactcatcaatgttgcagatatggagacatcagtattccggtgacttaaatatagtcatatgtgtaggctttagtac 31712872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 5917720 - 5917531
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||||||||| | |||| |||||||||||||||| |||| |||||||||        |||| |||||||||||||||||||    
T  5917720 tcgtctttgtgcgacgttgtttgtctttcctattttgttcaggtatttgttcggttcagattgtcaga-------tgatccagtgcagatccaatcaatg 5917628  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  |   | ||||||| ||| |||||| ||| ||   || ||||||||||| ||||||||||||||| |||||| ||||| |||||||    
T  5917627 actttggcgtcgtcagcattgcagacccgaagacatgggtattttggagacttgaatatattcatatgtgtaggctattgtactttgtcattttatg 5917531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 405
Target Start/End: Original strand, 37659102 - 37659208
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||| || ||||||||| ||||| |||||  |||| ||||||||||| |||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  37659102 tcgtctttgtacgacgttgtttgcctttcttgtttcgttcaagtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatg 37659201  T
Q  399 actttga 405  Q
    |||||||    
T  37659202 actttga 37659208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 496
Target Start/End: Original strand, 16809081 - 16809196
Alignment:
Q  381 gtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgta 480  Q
    |||||||  ||||||||||||||||| || | |||||||||||||| || ||||  || |||| || ||||||||||| |||||||||||||||| ||||    
T  16809081 gtgcagactcaatcaatgactttgacgttgtccacgttgcagatccagaaacatgagtattccggagacttgaatatagtcatatgtgtaggcttctgta 16809180  T
Q  481 ccttgtcgttttatgt 496  Q
    | |||| |||||||||    
T  16809181 ctttgttgttttatgt 16809196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 494
Target Start/End: Original strand, 5328095 - 5328280
Alignment:
Q  305 tttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgacttt 403  Q
    |||||||| |||||||||| |||| ||| |   ||| ||||||| ||| |||| ||||||||| |||||| |||||||||||||||||||||||||||||    
T  5328095 tttgtgcgacgttgtttgtttttcttgtctc--tcaagtatttgatcggttcagattgtcagatcagctttgatctagtgcagatccaatcaatgacttt 5328192  T
Q  404 gacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    | |    | ||||||||||||||||| |||| | | |||| || | || |||||| | ||||||||| || ||||||| ||| ||||||||    
T  5328193 ggc---gtccacgttgcagatccggatacatggttattccggagatttaaatatagttatatgtgtatgcatttgtactttgccgttttat 5328280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 288 - 495
Target Start/End: Complemental strand, 7281117 - 7280911
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||  ||||||||||||  | |||||||||||   ||||| || |||||||||||||| || | ||||||| | | ||||||| | |||||||    
T  7281117 ttggtttgttcgtcgtctttgtgcaacattgtttgtcttatttgtttcatgcaggtatttgttcggtttagattgtcatatccgcttcgacc-agtgcag 7281019  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    || ||||| ||||||||| | |  | |||||||||||||  ||||||| ||| |||| |||||||||||||| ||||||  ||| | |||||||| ||||    
T  7281018 attcaatctatgactttg-cgtcgtccacgttgcagatctagagacatgggtattccggatacttgaatatagtcatataagtatgtttttgtactttgt 7280920  T
Q  487 cgttttatg 495  Q
     ||||||||    
T  7280919 tgttttatg 7280911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 9270144 - 9270252
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||| | ||||||||||| ||||||    
T  9270144 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtgca 9270243  T
Q  386 gatccaatc 394  Q
    |||||||||    
T  9270244 gatccaatc 9270252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 434
Target Start/End: Complemental strand, 11298751 - 11298603
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||||||||||||||||||||    | || ||||||| ||||||||  ||| |||||||||  ||||| |||| ||||||    
T  11298751 gttgttttgtttgtcgtctttgtgcggcgttgtttgtcttttccctcttgttcaggtgtttgttcggatcagattgtcagattagctttgatccagtgca 11298652  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||| ||||||||||| | |  |  |||||||| ||||||||||||    
T  11298651 gatccaaccaatgactttggcgtcataaacgttgcatatccggagacat 11298603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 434
Target Start/End: Complemental strand, 14115819 - 14115671
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  | |||||| ||||   |||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  14115819 gttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 14115720  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||||||||||||| | |  | ||||||||||||| | ||||||    
T  14115719 gatccaatcaatgactttggcgtcatccacgttgcagatctgaagacat 14115671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 494
Target Start/End: Original strand, 2629051 - 2629241
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatctagtgcagatccaatcaatgactt 402  Q
    |||||||||| | ||||||||||||| |||||  |||||| ||||||| | |   ||||||||| ||||||||||| |||||||||| ||||||||||||    
T  2629051 tctttgtgcgacattgtttgtctttcttgtttcgttcaggcatttgtttggtcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactt 2629150  T
Q  403 tgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    ||   |  |  |  ||| |||| |||||||||  || |||| || |||| |||||| ||||||||||||| ||| |||| ||||||||||||    
T  2629151 tggagtcctcaatattgtagat-cggagacatgtgtattccggagacttaaatatagtcatatgtgtaggatttagtactttgtcgttttat 2629241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 404
Target Start/End: Original strand, 13864498 - 13864600
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| |||  |||| ||||||||| ||||||||||  |||||| || ||||| ||||||    
T  13864498 tctttctgcggcgttgtttgtctttcttgttttatgcaggtatttcttcagttcagattgtcagatcagcttcgatacagtgcatattcaatccatgact 13864597  T
Q  402 ttg 404  Q
    |||    
T  13864598 ttg 13864600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 36545772 - 36545563
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttat-tcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgc 384  Q
    |||||||||||  ||||||||||||| |||| | ||| |||| | |||| | ||||||||||| ||||||||  ||||||||  ||||| |||| |||||    
T  36545772 gttggtttgttagtcgtctttgtgcgacgttctatgtttttc-tattttctctcaggtatttgatcgattcaggttgtcagattagctttgatccagtgc 36545674  T
Q  385 agatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacctt 484  Q
    | | |||||||||||||||| |    | |||||||||||||| ||||||| | |||||| |  | || |||||| ||||||||||| ||  |||||| ||    
T  36545673 aaacccaatcaatgactttggctccatccacgttgcagatccagagacatggttgttccggtgatttaaatatagtcatatgtgtaagcaattgtacttt 36545574  T
Q  485 gtcgttttatg 495  Q
    |||||||||||    
T  36545573 gtcgttttatg 36545563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 9992790 - 9992998
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||| | | |||||||| |||| |||||   | || |||||| ||| ||||| ||||||||  |||||| ||| | ||||    
T  9992790 gttggtttgttcgtcgtctttgtgtgacattgtttgtttttcttgtttctcttagatatttgatcggttcaaattgtcagataagcttcaatccaatgca 9992889  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||| ||||||| | |  | |||||||||||||| ||||||| | | |||| || | || |||||| |||||||||||||| ||||||| |||    
T  9992890 gatccaatcaacgactttggcgtcatccacgttgcagatcc-gagacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttg 9992988  T
Q  486 tcgttttatg 495  Q
      ||||||||    
T  9992989 ctgttttatg 9992998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 23766875 - 23766981
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcat-gttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaat 397  Q
    ||||||||||||| |||||||||| |||  | | || ||||| |||||||||||||||| ||||||||| ||||||||||| |||| ||||  |||||||    
T  23766875 tcgtctttgtgcgacgttgtttgtatttttttggttcattcatgtatttgttcgattcagattgtcagatcagcttcgatccagtgtagattaaatcaat 23766974  T
Q  398 gactttg 404  Q
    |||||||    
T  23766975 gactttg 23766981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 495
Target Start/End: Complemental strand, 31147723 - 31147609
Alignment:
Q  382 tgcagatccaatcaatgactttgacatttttcacgttgcaga-tccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgta 480  Q
    ||||||||||||||||||||||||| |  | ||||||||||| ||| |||||||  || || | || |||||||||||| ||||| ||||||||||| ||    
T  31147723 tgcagatccaatcaatgactttgacgtcgtccacgttgcagaatccagagacatgagtatttcggagacttgaatataaccatatatgtaggcttttata 31147624  T
Q  481 ccttgtcgttttatg 495  Q
    | ||||| |||||||    
T  31147623 ctttgtcattttatg 31147609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 5989753 - 5989870
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||| ||||  ||||||||||||||||||||||||||||| | |||   ||| |||||| |||| |||| ||||||||  || |||||||  ||||||    
T  5989753 gttggtatgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgctcaagtatttcttcggttcagattgtcaggtcaacttcgattcagtgca 5989852  T
Q  386 gatccaatcaatgacttt 403  Q
    ||| ||||||||||||||    
T  5989853 gattcaatcaatgacttt 5989870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 496
Target Start/End: Complemental strand, 7014385 - 7014248
Alignment:
Q  359 ttgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatata 458  Q
    |||||||| |||||| | ||||||||| ||| |||||||||||||||     |  ||||||||||| ||||||||| | | || ||||||||| | ||||    
T  7014385 ttgtcagatcagctttggtctagtgcatatcaaatcaatgactttgaagccgtcaacgttgcagattcggagacatggatatttcagatacttaattata 7014286  T
Q  459 atcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
     ||||||||||||| ||| |||| |||| |||||||||    
T  7014285 gtcatatgtgtaggttttagtactttgttgttttatgt 7014248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 1215330 - 1215214
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| || |||||||||| |||||||| |||||  |   || |||||||  |||||||||||| ||||||| | |||||| |||||||||||    
T  1215330 gttgttttgtttgtcatctttgtgcgacgttgtttatcttt--ttccttgttcaggtggttgttcgattcagattgtcaaatcagctttgatctagtgca 1215233  T
Q  386 gatccaatcaatgactttg 404  Q
    ||||||| |||||||||||    
T  1215232 gatccaaccaatgactttg 1215214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 495
Target Start/End: Original strand, 5989898 - 5989945
Alignment:
Q  448 acttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  5989898 acttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatg 5989945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 14327602 - 14327705
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    |||| |||| || |||||||| |||| ||||||||| ||||||||||  ||||||    
T  14327602 gttgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcccttttgttcaagtgtttgttcggttcagattgtcagatcagcttcgatacagtgca 14327701  T
Q  386 gatc 389  Q
    ||||    
T  14327702 gatc 14327705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 388
Target Start/End: Original strand, 31874207 - 31874309
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| | |||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| || |||||||| ||||||    
T  31874207 gttggtttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagaacatcttcgatccagtgca 31874306  T
Q  386 gat 388  Q
    |||    
T  31874307 gat 31874309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 27534398 - 27534287
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| |||||||||||||||||||||||| |||    | || || |||| |||||||   ||| |||||||||  |||||||||| |||||||||||    
T  27534398 tttgtttgtcgtctttgtgcggcgttgtttgtgttttccctcttgtttaggtgtttgttcagatcagattgtcagattagcttcgatccagtgcagatcc 27534299  T
Q  391 aatcaatgactt 402  Q
    || |||||||||    
T  27534298 aaccaatgactt 27534287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 404
Target Start/End: Complemental strand, 18190830 - 18190719
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| | ||||||||||| ||||||||||||||  |   || ||||  | |||||| |||||| ||||||| | ||||||||||| |||||||||||    
T  18190830 tttgtttgttgtctttgtgcgacgttgtttgtcttt--tcccttgttcaaatgtttgtttgattcagattgtcaaatcagcttcgatccagtgcagatcc 18190733  T
Q  391 aatcaatgactttg 404  Q
    || |||||||||||    
T  18190732 aaccaatgactttg 18190719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 492
Target Start/End: Original strand, 32920852 - 32920973
Alignment:
Q  371 cttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgta 470  Q
    |||||||| ||||  ||||||||||||||||||| | |  |  |||||||||||| |||| ||| | | ||||||||| || |||||| |||| | ||||    
T  32920852 cttcgatccagtgtggatccaatcaatgactttggcgtcatcaacgttgcagatctggaggcattgctattccagatattttaatatagtcatgtttgta 32920951  T
Q  471 ggcttttgtaccttgtcgtttt 492  Q
    ||||| |||||  |||||||||    
T  32920952 ggcttatgtactatgtcgtttt 32920973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 496
Target Start/End: Original strand, 3028301 - 3028349
Alignment:
Q  448 acttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    ||||||||||| |||||||||||| ||||||||| ||||| ||||||||    
T  3028301 acttgaatatagtcatatgtgtagacttttgtactttgtcattttatgt 3028349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 434
Target Start/End: Original strand, 3681129 - 3681183
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||| ||||||||||||||||| |  ||||||||| ||||||| ||||||    
T  3681129 agtgcagattcaatcaatgactttgacgtcgttcacgttgaagatccgaagacat 3681183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 17019241 - 17019359
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||   |||||||||||||| ||||| ||  | |||||||||||  ||| ||| |||||  | ||| |||| | ||||    
T  17019241 gttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatctaagtatttgttcggatcagattttcagattaactttgatccaatgca 17019340  T
Q  386 gatccaatcaatgactttg 404  Q
    |||||||||||||| ||||    
T  17019341 gatccaatcaatgattttg 17019359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 17549678 - 17549796
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||   |||||||||||||| ||||| ||  | |||||||||||  ||| ||| |||||  | ||| |||| | ||||    
T  17549678 gttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatctaagtatttgttcggatcagattttcagattaactttgatccaatgca 17549777  T
Q  386 gatccaatcaatgactttg 404  Q
    |||||||||||||| ||||    
T  17549778 gatccaatcaatgattttg 17549796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 495
Target Start/End: Original strand, 31874331 - 31874412
Alignment:
Q  413 cacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||||||||| |||||| | | |||| || | || |||||| ||||||||||||||  |||||| |||||||||||||    
T  31874331 cacgttgcagatccg-agacatggtttttccggagatttaaatatagtcatatgtgtaggcaattgtactttgtcgttttatg 31874412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 432
Target Start/End: Complemental strand, 283894 - 283833
Alignment:
Q  371 cttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagac 432  Q
    ||||||| ||||||||||| |||||||||||||  | |  | ||||||||||||||||||||    
T  283894 cttcgatttagtgcagatcaaatcaatgactttagcgtcgtccacgttgcagatccggagac 283833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 284465 - 284416
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattca 340  Q
    |||||||| | |||| |||||||||||||||||||||| |||||| ||||    
T  284465 gtttgtttgttgtctgtgtgcggcgttgtttgtctttcttgttttgttca 284416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 631412 - 631461
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattca 340  Q
    |||||||| | |||| |||||||||||||||||||||| |||||| ||||    
T  631412 gtttgtttgttgtctgtgtgcggcgttgtttgtctttcttgttttgttca 631461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 432
Target Start/End: Original strand, 631983 - 632044
Alignment:
Q  371 cttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagac 432  Q
    ||||||| ||||||||||| |||||||||||||  | |  | ||||||||||||||||||||    
T  631983 cttcgatttagtgcagatcaaatcaatgactttagcgtcgtccacgttgcagatccggagac 632044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 817224 - 817273
Alignment:
Q  291 gtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattca 340  Q
    |||||||| | |||| |||||||||||||||||||||| |||||| ||||    
T  817224 gtttgtttgttgtctgtgtgcggcgttgtttgtctttcttgttttgttca 817273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 432
Target Start/End: Original strand, 817795 - 817856
Alignment:
Q  371 cttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagac 432  Q
    ||||||| ||||||||||| |||||||||||||  | |  | ||||||||||||||||||||    
T  817795 cttcgatttagtgcagatcaaatcaatgactttagcgtcgtccacgttgcagatccggagac 817856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 495
Target Start/End: Complemental strand, 9799838 - 9799793
Alignment:
Q  450 ttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||| |||||||||||||||||||||| || | ||||||||    
T  9799838 ttgaatatagtcatatgtgtaggcttttgtacgttttagttttatg 9799793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Original strand, 10148202 - 10148283
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||||  || || | || |||| |||||| |||||| ||||||| |  |||| |||||||||||||    
T  10148202 acgttgcagatccggagacatgagtatttcggagacttaaatatagtcatatttgtaggcataagtactttgtcgttttatg 10148283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 38546026 - 38545977
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcat 463  Q
    |||||||||||||||||||||| || |||| || ||||||||||| ||||    
T  38546026 acgttgcagatccggagacataagtattccggagacttgaatatagtcat 38545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 3028174 - 3028246
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca 357  Q
    |||||||||||||  |||||||| ||| || ||||||||||||  | |||| |||| ||||||||||| ||||    
T  3028174 atgttggtttgttcgtcgtctttatgctgcattgtttgtcttttttattttgttcatgtatttgttcggttca 3028246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 434
Target Start/End: Original strand, 10334395 - 10334447
Alignment:
Q  382 tgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||| ||||||||||||| |||  |  |||||||||||||||||||||    
T  10334395 tgcagatccgatcaatgactttggcatcgtcaacgttgcagatccggagacat 10334447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 26582881 - 26582735
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||| ||  ||| ||||||||   ||||||||| |||| |||||  ||| | ||||||||||||||| ||||||||| ||||||| ||||   |    
T  26582881 atgttggtttattcgtcgactttgtgcattgttgtttgt-tttcttgtttcgttcggatatttgttcgattcagattgtcagatcagcttcaatct---g 26582786  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    || ||| ||||||| |||||  |||  | ||||||||||||||||| ||||    
T  26582785 catatctaatcaattactttagcatgatccacgttgcagatccggatacat 26582735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 7e-41; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 23843415 - 23843206
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| ||||||||||||||| |||||   | ||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  23843415 gttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 23843316  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||| ||||||||||||||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| |||||| ||||||| |||||||||||    
T  23843315 gattcaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatatgtaggcatttgtaccttg 23843216  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  23843215 ccgttttatg 23843206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 495
Target Start/End: Complemental strand, 12576459 - 12576263
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| || | |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  12576459 tcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 12576360  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| | |  | ||||||||||||||||| |||| | | |||| || | || |||||| |||||||||||||| |||||||||||||||||||||    
T  12576359 actttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgtcgttttatg 12576263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 285 - 495
Target Start/End: Original strand, 32804416 - 32804627
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  ||||||||||  ||||||||||||||||| |||||  |||| ||||||||| |||||| ||||| ||| || |||||||| ||||    
T  32804416 atgttggtttgttcctcgtctttgtatggcgttgtttgtctttcttgtttcgttcatgtatttgtttgattcagattgtgagatcaacttcgatcaagtg 32804515  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    |||||||||||||||||||||   |  | || |||| |||| |||||||||   | ||||||| ||||||||||| | |||||||||||||||||||| |    
T  32804516 cagatccaatcaatgactttggtgtcgtccatgttgtagattcggagacatgaatattccagagacttgaatatagttatatgtgtaggcttttgtactt 32804615  T
Q  484 tgtcgttttatg 495  Q
    ||| ||||||||    
T  32804616 tgttgttttatg 32804627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 13234099 - 13233890
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| ||||| |||||||| ||| ||||||||||||||    
T  13234099 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcaaattgtcagatcagtttcgatctagtgca 13234000  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    |||||||||||||| |||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| ||||||||||||||   ||||  |||    
T  13233999 gatccaatcaatgattttggcgtcatccacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtaggcaactgtattttg 13233900  T
Q  486 tcgttttatg 495  Q
    ||||||||||    
T  13233899 tcgttttatg 13233890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 19759911 - 19760120
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    ||||||||||| |||||||||||||| |||||||||| |||| |||||   ||| ||||||| ||| |||| ||||||||| ||| ||||||| ||||||    
T  19759911 gttggtttgttcatcgtctttgtgcgacgttgtttgtatttcttgtttctctcatgtatttgatcggttcagattgtcagatcagtttcgatccagtgca 19760010  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| ||||||||| || | |||||||||||    
T  19760011 gatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgcagacatttgtaccttg 19760110  T
Q  486 tcgttttatg 495  Q
     | |||||||    
T  19760111 ccattttatg 19760120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 299 - 495
Target Start/End: Original strand, 7049380 - 7049577
Alignment:
Q  299 atcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaat 397  Q
    |||||||||||| | |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| || |||||||| ||||||||| ||||||||    
T  7049380 atcgtctttgtgagacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcaacttcgatccagtgcagatgcaatcaat 7049479  T
Q  398 gactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||  | ||||||||||||||||||| ||   | ||||  | | || |||||| |||||||||||||| ||||||| |||||||||||||    
T  7049480 gactttgacatcatccacgttgcagatccggagatatgattattccgaagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatg 7049577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 495
Target Start/End: Original strand, 20496332 - 20496525
Alignment:
Q  303 tctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgact 401  Q
    ||||||| || | ||||||||||||  |||||| |||||||||||||||| |||| ||||||||| |||||| |||| |||||| |||||||||||||||    
T  20496332 tctttgtacgactttgtttgtcttttttgttttgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgcaaatccaatcaatgact 20496431  T
Q  402 ttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||   |  |  |||||||| |||  |||| || ||| |||| || ||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  20496432 ttggtgtcgtcaacgttgcatatcttgagagatgggtattccggagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatg 20496525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 288 - 495
Target Start/End: Original strand, 20845132 - 20845340
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||  ||||||||||||| || ||||||| |||| |||||   |||| |||||| ||| |||| ||||||||| || |||||||| |||||||    
T  20845132 ttggtttgttcgtcgtctttgtgcgacgctgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcaacttcgatccagtgcag 20845231  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    |||||||||||||||| | | |  | ||||||||| |||| || |||| | | |||| |||| || |||||| |||||| ||||| | ||||||| ||||    
T  20845232 atccaatcaatgacttcggcgtcatccacgttgcaaatccagaaacatggttattccggatatttaaatatagtcatatttgtagacatttgtactttgt 20845331  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  20845332 cgttttatg 20845340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 10744719 - 10744914
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| ||||||||| ||||| || ||  || ||||||||||||| |||| ||||||||| |||||||||||  ||||| ||| ||| ||||    
T  10744719 tcgtctttgtgcgacgttgtttgcctttcttggttcgtttaggtatttgttcggttcagattgtcagatcagcttcgatccggtgca-atcaaattaatg 10744817  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||   |  |  |||||||| |||||||||||  ||| |||| || |||| |||||| ||||||||||||||||| |||| ||| |||||||||    
T  10744818 actttggagtcgtcaacgttgcaaatccggagacaagggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 10744914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 495
Target Start/End: Original strand, 11426077 - 11426277
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||  |||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  11426077 tcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatctcttcagattgtcagatcagcttcgatccagtgcagattcaatcaatg 11426176  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat----aatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    |||||| | |  | ||||||| ||||||| | |||| | | |||| || | || |||||    | |||||||||||||| ||||||| |||| |||||||    
T  11426177 actttggcgtcatccacgttgtagatccgaaaacatggttattccggagatttaaatatagtcagtcatatgtgtaggcatttgtactttgttgttttat 11426276  T
Q  495 g 495  Q
    |    
T  11426277 g 11426277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 494
Target Start/End: Original strand, 904405 - 904599
Alignment:
Q  301 cgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatga 399  Q
    |||||||||| | ||||||||||||||| |||||| ||||  ||| |||||| |||| | ||||||| ||||||||||| | |||| |||||||| ||      
T  904405 cgtctttgtgtgacgttgtttgtctttcttgttttgttcaactatatgttcggttcagactgtcagatcagcttcgatccaatgcatatccaatcgatat 904504  T
Q  400 ctttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttat 494  Q
    |||||   || | || |||||| ||||  |||||  ||| ||||||  ||||||||||| ||||  |||||||||||||||| ||||||||||||    
T  904505 ctttggtgttgtccaggttgcaaatccatagacacgggtattccagtgacttgaatatagtcatccgtgtaggcttttgtactttgtcgttttat 904599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 494
Target Start/End: Original strand, 5544828 - 5545038
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||| ||||||  ||||||||||| | ||||||||||||||| | |||  ||||||| |||||| | |||| | ||||| | ||| |||||||  |||    
T  5544828 atgttgatttgttcgtcgtctttgtgtgacgttgtttgtctttcttatttcgttcaggtgtttgtttggttcagaatgtcatatcagattcgatcctgtg 5544927  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtacct 483  Q
    || |||||||||| |||||||   ||||||||||||||||||  ||||||| ||| || |  | |||||||| || |||| |||||||||| || ||| |    
T  5544928 catatccaatcaacgactttggtgtttttcacgttgcagatctagagacatgggtatttcgaaaacttgaatctagtcatttgtgtaggctattttactt 5545027  T
Q  484 tgtcgttttat 494  Q
    ||| |||||||    
T  5545028 tgttgttttat 5545038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 8644381 - 8644486
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||||||| | |||| |||||| || || ||| |||| | ||||||| |||||||||    
T  8644381 tcgtctttgtgcggcgttgcttgtctttcttgttttgttcaggtatttgtttggttcagattgtctgatcaacttagatccattgcagattcaatcaatg 8644480  T
Q  399 actttg 404  Q
    ||||||    
T  8644481 actttg 8644486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 496
Target Start/End: Complemental strand, 15128107 - 15127911
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||||||  |||||||||||||| | ||| ||||| ||||||||||  |||| |||||||   || |||||||| | |||||||| ||||||||    
T  15128107 tcgtctttgtgcgatgttgtttgtctttcttctttcattcaagtatttgttctgttcagattgtcaattcaacttcgatccactgcagatcaaatcaatg 15128008  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatgt 496  Q
    |||||| | || | |||||||||||||||||| | ||  | |||   | ||||||| ||| |||||||||||||||| |||||  ||| |||||||||    
T  15128007 actttggcgttgtccacgttgcagatccggaggc-taaatattctgaagacttgaacatagtcatatgtgtaggcttctgtactctgttgttttatgt 15127911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 434
Target Start/End: Original strand, 1944219 - 1944367
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattc-aattgtcagaccagcttcgatctagtgca 385  Q
    |||||||||| | ||||||||||||||||||||||||||||| ||| |  |||||||| ||||| | ||| |||||||| | ||||||||||| | |||     
T  1944219 gttggtttgtctgtcgtctttgtgcggcgttgtttgtctttcttgtgtcgttcaggtaattgtttggttcaaattgtcatatcagcttcgatccaatgcg 1944318  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    |||||||||||| | |||| | |  | ||||||||| ||||| ||||||    
T  1944319 gatccaatcaataattttggcgtcgtccacgttgcatatccgaagacat 1944367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 548859 - 548709
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||||||||||  |||||||  || | |||||||| | |||| |||||   ||||||||||| ||| |||| ||||||| | ||||||||||||||||    
T  548859 atgttggtttgttcgtcgtcttcatgtgacgttgtttctttttcttgtttctatcaggtatttgatcggttcagattgtcatatcagcttcgatctagtg 548760  T
Q  384 cagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    |||||||||||||| |||||| | |  | |||| |||||||| ||||||||    
T  548759 cagatccaatcaattactttggcgtcatccacgctgcagatctggagacat 548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 495
Target Start/End: Complemental strand, 5417132 - 5417006
Alignment:
Q  369 agcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtg 468  Q
    |||||||||  ||||||||||||||||| |||||||   |  | |||||||||||||| || |||| ||| || | || ||||||||||| |||||||||    
T  5417132 agcttcgatgcagtgcagatccaatcaaagactttggtgtcgtccacgttgcagatccagatacatgggtatttcggagacttgaatatagtcatatgtg 5417033  T
Q  469 taggcttttgtaccttgtcgttttatg 495  Q
    || |||||||||| ||| |||||||||    
T  5417032 tatgcttttgtactttgccgttttatg 5417006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 293 - 495
Target Start/End: Original strand, 16913456 - 16913657
Alignment:
Q  293 ttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcca 391  Q
    ||||| |||||| ||||||| |||||||||| |||| |||||   ||| ||||||| ||  |||| ||||||||| ||| ||| ||  ||||||||||||    
T  16913456 ttgttcatcgtccttgtgcgacgttgtttgtttttc-tgtttctctcatgtatttgatctgttcagattgtcagatcagtttcaatacagtgcagatcca 16913554  T
Q  392 atcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttt 491  Q
    ||||||||| ||| | |  | ||||||||||||||||| | ||   | |||| |||| || |||||| |||||||||||||| ||||||| ||| |||||    
T  16913555 atcaatgac-ttggcgtcatccacgttgcagatccggaaagatgattattccggatatttaaatatagtcatatgtgtaggcatttgtactttgccgttt 16913653  T
Q  492 tatg 495  Q
    ||||    
T  16913654 tatg 16913657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 892482 - 892591
Alignment:
Q  361 gtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataat 460  Q
    |||||| | ||||||| | ||||||||||||||||||||||||| | || | ||||||||| || |||||||||  || | || || ||||||||||| |    
T  892482 gtcagatctgcttcgacccagtgcagatccaatcaatgactttggcgttgtccacgttgcaaattcggagacatgagtatcccggagacttgaatatagt 892581  T
Q  461 catatgtgta 470  Q
    ||||||||||    
T  892582 catatgtgta 892591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 487
Target Start/End: Complemental strand, 8633115 - 8632986
Alignment:
Q  358 attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat 457  Q
    ||||||||| ||||||||||| |  ||||||||||||||| |||||| | |  | ||| ||||||||||||| |||| | | |||| || | || |||||    
T  8633115 attgtcagatcagcttcgatccaacgcagatccaatcaattactttggcgtcatccacattgcagatccggaaacatggttattccggagatttaaatat 8633016  T
Q  458 aatcatatgtgtaggcttttgtaccttgtc 487  Q
    | |||||||||||||| ||||||| |||||    
T  8633015 agtcatatgtgtaggcatttgtactttgtc 8632986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 31804356 - 31804461
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    ||||||| ||||| | ||||||||||||| |||||   ||| ||||||| || ||||| ||||||||| ||| |||||||||||||||||| ||| ||||    
T  31804356 tcgtcttagtgcgacattgtttgtctttcttgtttcgctcaagtatttgctcaattcagattgtcagatcagattcgatctagtgcagatcaaatgaatg 31804455  T
Q  399 actttg 404  Q
    ||||||    
T  31804456 actttg 31804461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 495
Target Start/End: Original strand, 31748081 - 31748289
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||| ||| ||||||||||||| |||||||||| |||| |||||   ||| ||||||| ||  | || ||||||||| ||||||||||| |||||||    
T  31748081 ttggtttctttgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttgatcagtacagattgtcagatcagcttcgatcaagtgcag 31748180  T
Q  387 atccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgt 486  Q
    || |||||| ||||||   | |  | | ||||||| || |||||| || | | |||  || | || |||||| |||||||||||||| ||||||| |||     
T  31748181 attcaatcattgacttcagcgtcatcctcgttgcaaatacggagatatggttattctggagatttaaatatagtcatatgtgtaggcatttgtactttgc 31748280  T
Q  487 cgttttatg 495  Q
    |||||||||    
T  31748281 cgttttatg 31748289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 404
Target Start/End: Complemental strand, 33541515 - 33541404
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| |||||||||||||  |||||||||||||  |   || ||||||| |||||| |||||| ||||| ||| |||||||| || |||||||||||    
T  33541515 tttgtttgtcgtctttgtgcgatgttgtttgtcttt--tcccttgttcaggtgtttgttagattcagattgttagatcagcttcgttccagtgcagatcc 33541418  T
Q  391 aatcaatgactttg 404  Q
    || |||||||||||    
T  33541417 aaccaatgactttg 33541404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 12652064 - 12651983
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||||||||  ||| ||||| |||| || ||||||||||| ||||||||||||| |||||||  ||||| |||||||    
T  12652064 acgttgcagatccgacgacttaggtattccggagacttgaatatagtcatatgtgtaggtttttgtaatttgtcattttatg 12651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 8694270 - 8694150
Alignment:
Q  285 atgttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtg 383  Q
    |||||| ||||||| |||||||| ||| | ||||| ||| |||||| | || | ||||| ||| |||  || | |||||||||||| ||| ||||||| |    
T  8694270 atgttgttttgtttctcgtctttatgcagagttgtctgtttttcatatcttgtccaggtgtttcttcagtttatattgtcagaccaactttgatctagag 8694171  T
Q  384 cagatccaatcaatgactttg 404  Q
    |||||||||||||||||||||    
T  8694170 cagatccaatcaatgactttg 8694150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 411
Target Start/End: Original strand, 22530408 - 22530527
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    |||||| ||| ||||||||||  |||||||||||||| | |||| || | ||||||||||||||   || |||||| || |||||||| |||||||||||    
T  22530408 tttgttcatcatctttgtgcgatgttgtttgtctttctt-ttttgtttaagtatttgttcgattttgatggtcagatcaacttcgatccagtgcagatcc 22530506  T
Q  391 aatcaatgactttgacatttt 411  Q
    ||| ||| |||||| ||||||    
T  22530507 aatgaatcactttgccatttt 22530527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 2304722 - 2304651
Alignment:
Q  394 caatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatat 465  Q
    ||||||||||| |||| |  |||||||||||||||||||||  || ||| ||||||||||||||| ||||||    
T  2304722 caatgactttggcattgtcaacgttgcagatccggagacatgagtattctagatacttgaatatagtcatat 2304651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 495
Target Start/End: Original strand, 8644518 - 8644560
Alignment:
Q  453 aatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  8644518 aatatagtcatatgtgtaggcttttgtactttgtcgttttatg 8644560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 404
Target Start/End: Original strand, 34020733 - 34020844
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatcc 390  Q
    ||||||| |||||||||| || |||||||||| |||| | || |  |||||| |||||||   ||| ||||||||| |||| ||||||||||| ||||||    
T  34020733 tttgtttgtcgtctttgtacgacgttgtttgtttttcctcttgt--tcaggtgtttgttcagatcagattgtcagatcagcctcgatctagtgtagatcc 34020830  T
Q  391 aatcaatgactttg 404  Q
    || |||||||||||    
T  34020831 aaccaatgactttg 34020844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 12481234 - 12481153
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||||  |  |||| || ||||||||||| |||||| ||||||| |  |||||||| |||||||||    
T  12481234 acgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgccgttttatg 12481153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 12654173 - 12654092
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    ||||||||||| |||||||||  || |||| || ||||||||||| |||||| ||||||| | ||||  |||||||||||||    
T  12654173 acgttgcagattcggagacatgagtattccggagacttgaatatagtcatatttgtaggcatatgtattttgtcgttttatg 12654092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 495
Target Start/End: Original strand, 30813323 - 30813404
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    |||||||||||||||||||||  |  || |||| ||||||||||| |||||| ||||||| |  |||||||| |||||||||    
T  30813323 acgttgcagatccggagacatgaggatttcagagacttgaatatagtcatatttgtaggcataggtaccttggcgttttatg 30813404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 33194811 - 33194920
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    |||||| ||| ||||||||||||||   | || ||||||| |||| ||||||||| ||| |||  || ||||||||||| || |||||||||| | ||||    
T  33194811 agtgcaaatctaatcaatgactttggtttcttccacgttgtagattcggagacatgggtattctggagacttgaatatagtcttatgtgtaggttgttgt 33194910  T
Q  480 accttgtcgt 489  Q
    || |||||||    
T  33194911 actttgtcgt 33194920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 32457769 - 32457876
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||| ||||||  ||||||||||||| | |||||| | |||| |||||   ||||||||||| ||| |||| |||||||||||| |||||||  ||||||    
T  32457769 gttgatttgttcgtcgtctttgtgcgacattgtttat-tttcttgtttctctcaggtatttgatcggttcagattgtcagaccaacttcgattcagtgca 32457867  T
Q  386 gatccaatc 394  Q
    |||||||||    
T  32457868 gatccaatc 32457876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 5417189 - 5417142
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttt 334  Q
    |||||||||||  |||||||||||||||||||||| |||||| |||||    
T  5417189 gttggtttgttcgtcgtctttgtgcggcgttgtttctctttcttgttt 5417142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 1106731 - 1106682
Alignment:
Q  414 acgttgcagatccggagacataggtgttccagatacttgaatataatcat 463  Q
    |||||||||||||||||||||  || |||| || ||||||||||||||||    
T  1106731 acgttgcagatccggagacatgagtattccggagacttgaatataatcat 1106682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 891712 - 891776
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcg 352  Q
    ||||||||||| || ||||||||| | || ||||||||||| | |||  ||||||||||||||||    
T  891712 ttggtttgtttgtcatctttgtgcagtgtggtttgtctttcttatttcgttcaggtatttgttcg 891776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 12194 - 11985
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||| |||||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| |||||||||| |||||||    
T  12194 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatttagtgca 12095  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
    ||||||||||||||||||| | |  | |||||||||||||||||||||| | | |||| || | || |||||| ||| ||| |||||| ||||||| |||    
T  12094 gatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggttattccggagatttaaatatagtcacatgcgtaggcatttgtactttg 11995  T
Q  486 tcgttttatg 495  Q
    || |||||||    
T  11994 tcattttatg 11985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 287 - 495
Target Start/End: Original strand, 11137 - 11344
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||   ||||||| |||| |||||||||| |||| |||||   ||||||||||| |||||| | ||||||| | |||||| |||||||||||    
T  11137 gttggtttgttcgccgtctttatgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgatttagattgtcaaatcagcttggatctagtgca 11236  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttg 485  Q
     |||||||||||||||||||| |  | |||||||||||||||||||||| | | ||||||| | |||| |||| ||  ||| ||||||  |||||| |||    
T  11237 tatccaatcaatgactttgacgtcatccacgttgcagatccggagacatggttattccagagatttgagtatagtc--atgcgtaggcaattgtactttg 11334  T
Q  486 tcgttttatg 495  Q
     |||||||||    
T  11335 ccgttttatg 11344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 244760 - 244877
Alignment:
Q  288 ttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcag 386  Q
    ||||||||||  ||||||||||||| |||||||||| |||| |||||   |||||||||||  || |||| ||||||||| ||||||||||| |||||||    
T  244760 ttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgaccggttcagattgtcagatcagcttcgatccagtgcag 244859  T
Q  387 atccaatcaatgactttg 404  Q
    ||||||||||||||||||    
T  244860 atccaatcaatgactttg 244877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 495
Target Start/End: Original strand, 908 - 1107
Alignment:
Q  292 tttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaattgtcagaccagcttcgatct-agtgcagatcc 390  Q
    |||||||  |||||||||||||||||||||||||||| ||||   |||| ||||| ||||      ||||||||| || ||||||| | |||||| ||||    
T  908 tttgtttcccgtctttgtgcggcgttgtttgtctttcttgttag-ttcacgtattggttcag----attgtcagatcaacttcgatttcagtgcacatcc 1002  T
Q  391 aatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagat-acttgaatataatcatatgtgtaggcttttgtaccttgtcgt 489  Q
    |||||||||||||||| |  |  | |||||| ||||| | |||| ||| |||| ||| ||||||||||| |||||||||||||||||||||| |||||||    
T  1003 aatcaatgactttgacgtcgtcaatgttgcatatccgcatacatgggtattcc-gatgacttgaatatagtcatatgtgtaggcttttgtactttgtcgt 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 434
Target Start/End: Complemental strand, 1132 - 984
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  |||| ||||||||  |||| ||||||||| ||| |  |||||||||||||| | ||||| |||||||| || |||||||||||||||    
T  1132 gttggtttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattgtcagatcaacttcgatctagtgca 1033  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||||||||| ||  | |  | || |||||||||||||||||||    
T  1032 gatccaatcaatgacattagcgtcgtccatgttgcagatccggagacat 984  T

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Target: scaffold0665 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 434
Target Start/End: Complemental strand, 1118 - 970
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  | |||||| ||||   |||||||| |||| |||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  1118 gttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 1019  T
Q  386 gatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||||||||||||| | |  | ||||||||||||| | ||||||    
T  1018 gatccaatcaatgactttggcgtcatccacgttgcagatctgaagacat 970  T

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Target: scaffold0045 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 495
Target Start/End: Complemental strand, 9567 - 9440
Alignment:
Q  368 cagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgt 467  Q
    ||||||||||| ||||||||| ||||||||||||||| | |  | ||||||||||||||||| |||| | | ||||  | | || |||||| ||||||||    
T  9567 cagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagtcatatgt 9468  T
Q  468 gtaggcttttgtaccttgtcgttttatg 495  Q
    |||||| ||||||| ||| |||||||||    
T  9467 gtaggcatttgtactttgccgttttatg 9440  T

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Target: scaffold0023 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 490
Target Start/End: Complemental strand, 91381 - 91191
Alignment:
Q  300 tcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgcagatccaatcaatg 398  Q
    |||||||||| || |||||| |||||||| | |||| ||  | |||||||||| ||||| |||||| | ||| || |||| |||| ||||| ||||| ||    
T  91381 tcgtctttgtacgacgttgtatgtctttctttttttgttatgatatttgttcggttcaaattgtcaaatcagttttgatccagtgtagatcaaatca-tg 91283  T
Q  399 actttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgtt 490  Q
    |||||| | || | |||||||||||| ||| |||||  || |||| || ||||||||||  |||||| ||||||||||||||| ||||||||    
T  91282 actttggcgttgtccacgttgcagattcggtgacatgagtattccggacacttgaatatggtcatatatgtaggcttttgtactttgtcgtt 91191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 495
Target Start/End: Original strand, 36698 - 36856
Alignment:
Q  338 tcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacatag 436  Q
    ||||||||||| ||  |||| ||||||||| ||||||||||| ||||||||||||||||||||||||| | |  | ||||||||||||||||| |||  |    
T  36698 tcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacaggg 36797  T
Q  437 gtgttccagatacttgaatataatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
     | |||  || | || |||||| ||||||||||||||  |||||| ||| | |||||||    
T  36798 ttattctggagatttaaatatagtcatatgtgtaggcaattgtactttgccattttatg 36856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 476
Target Start/End: Complemental strand, 11717 - 11577
Alignment:
Q  337 ttcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacata 435  Q
    |||| |||||||||| ||||| ||||||| | ||||||||||| |||||||||| ||||||||| ||||   |  |  ||||||||||||| || ||||     
T  11717 ttcatgtatttgttcaattcagattgtcaaatcagcttcgatccagtgcagatcaaatcaatgattttggagtcgtcaacgttgcagatccagaaacatg 11618  T
Q  436 ggtgttccagatacttgaatataatcatatgtgtaggcttt 476  Q
    ||| |||  || |||| |||||| |||||||||||||||||    
T  11617 ggtattctggagacttaaatatagtcatatgtgtaggcttt 11577  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 495
Target Start/End: Complemental strand, 136993 - 136856
Alignment:
Q  358 attgtcagaccagcttcgatctagtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatat 457  Q
    ||||||||| || |||||||| |||||||||| |||||| |||||||   |  |  ||||||||||||| ||||||| ||| |||| || |||| |||||    
T  136993 attgtcagatcaacttcgatcaagtgcagatcaaatcaacgactttggagtcgtcaacgttgcagatccagagacatgggtattccggagacttaaatat 136894  T
Q  458 aatcatatgtgtaggcttttgtaccttgtcgttttatg 495  Q
    | ||||||| ||| ||||  ||||||||  ||||||||    
T  136893 agtcatatgcgtaagcttcagtaccttgctgttttatg 136856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 137049 - 137001
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgtttt 335  Q
    |||| |||||| |||||||||||||| |||||||||| |||| ||||||    
T  137049 gttgttttgttcatcgtctttgtgcgacgttgtttgtttttcttgtttt 137001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0999 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 1921 - 2036
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacataggtgttccagatacttgaatataatcatatgtgtaggcttttgt 479  Q
    ||||||||||| ||||||||||||| | |  |  ||||||||||||  |||||||| || |||| || || ||| |||| || ||| ||||||| | |||    
T  1921 agtgcagatccgatcaatgactttggcgtcatcaacgttgcagatcgagagacataagtattccggagacatgattatagtcgtatttgtaggcatatgt 2020  T
Q  480 accttgtcgttttatg 495  Q
    || |||||||||||||    
T  2021 actttgtcgttttatg 2036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 434
Target Start/End: Complemental strand, 7028 - 6974
Alignment:
Q  380 agtgcagatccaatcaatgactttgacatttttcacgttgcagatccggagacat 434  Q
    ||||||||||| ||||||||||||| | |  || |||||||||||||||||||||    
T  7028 agtgcagatccgatcaatgactttggcgtcgttaacgttgcagatccggagacat 6974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 10302 - 10184
Alignment:
Q  287 gttggtttgtttatcgtctttgtgcggcgttgtttgtctttcatgttttattcaggtatttg-ttcgattcaattgtcagaccagcttcgatctagtgca 385  Q
    |||||||||||  ||||||||||||   |||||||||||||| |||||  |  ||||||||| || |||  ||||||||||  ||||| |||| | || |    
T  10302 gttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcgtctaggtatttgtttggatcaaattgtcagattagctttgatccaatgga 10203  T
Q  386 gatccaatcaatgactttg 404  Q
    |||||||||||||| ||||    
T  10202 gatccaatcaatgattttg 10184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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