View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3237_high_43 (Length: 406)

Name: NF3237_high_43
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3237_high_43
NF3237_high_43
[»] chr5 (43 HSPs)
chr5 (17-204)||(39776588-39776772)
chr5 (58-203)||(38916368-38916513)
chr5 (58-178)||(30355017-30355136)
chr5 (59-178)||(978077-978196)
chr5 (58-178)||(33387219-33387339)
chr5 (59-178)||(9502770-9502889)
chr5 (58-178)||(8086173-8086293)
chr5 (321-390)||(39776856-39776924)
chr5 (70-178)||(14634300-14634408)
chr5 (70-178)||(33587612-33587720)
chr5 (90-175)||(11251145-11251230)
chr5 (59-178)||(24992281-24992400)
chr5 (59-178)||(40156198-40156317)
chr5 (70-178)||(3472420-3472528)
chr5 (56-178)||(18094224-18094346)
chr5 (121-178)||(11761128-11761185)
chr5 (132-200)||(32400400-32400468)
chr5 (59-178)||(12007775-12007894)
chr5 (69-178)||(11785868-11785978)
chr5 (74-168)||(13812062-13812156)
chr5 (121-178)||(7224227-7224284)
chr5 (129-178)||(9050719-9050768)
chr5 (56-172)||(34111959-34112075)
chr5 (121-176)||(32017275-32017330)
chr5 (251-294)||(39776826-39776869)
chr5 (116-178)||(18998744-18998806)
chr5 (103-157)||(35825006-35825060)
chr5 (121-178)||(26387022-26387079)
chr5 (132-176)||(3422355-3422399)
chr5 (70-161)||(37495621-37495712)
chr5 (121-178)||(12447561-12447616)
chr5 (118-171)||(20692541-20692592)
chr5 (132-178)||(24916389-24916435)
chr5 (128-178)||(27109757-27109807)
chr5 (70-162)||(25330234-25330325)
chr5 (132-172)||(27579579-27579619)
chr5 (95-175)||(40267941-40268020)
chr5 (56-175)||(5947697-5947816)
chr5 (127-178)||(12456783-12456834)
chr5 (56-135)||(18598541-18598620)
chr5 (132-178)||(12359964-12360010)
chr5 (144-200)||(2825242-2825298)
chr5 (69-141)||(7750066-7750138)
[»] chr1 (44 HSPs)
chr1 (54-178)||(11641210-11641334)
chr1 (58-178)||(6402553-6402673)
chr1 (57-178)||(36757629-36757750)
chr1 (56-178)||(40771915-40772037)
chr1 (70-199)||(28030803-28030932)
chr1 (56-175)||(6766369-6766488)
chr1 (54-178)||(16120583-16120707)
chr1 (57-178)||(30003531-30003652)
chr1 (58-203)||(44647831-44647976)
chr1 (58-178)||(17305953-17306073)
chr1 (69-201)||(38153397-38153529)
chr1 (58-178)||(42788685-42788805)
chr1 (56-175)||(27292637-27292756)
chr1 (57-178)||(24321257-24321380)
chr1 (58-178)||(30701717-30701837)
chr1 (73-178)||(40977631-40977736)
chr1 (70-178)||(36399109-36399217)
chr1 (56-178)||(26910073-26910195)
chr1 (58-178)||(52024025-52024145)
chr1 (70-178)||(42735308-42735419)
chr1 (74-178)||(3485350-3485454)
chr1 (70-178)||(9342788-9342896)
chr1 (70-178)||(15382569-15382677)
chr1 (59-175)||(30385291-30385407)
chr1 (105-200)||(14777078-14777173)
chr1 (88-171)||(48375031-48375114)
chr1 (72-178)||(15912479-15912585)
chr1 (58-166)||(44644510-44644618)
chr1 (127-178)||(22575730-22575781)
chr1 (57-203)||(19711810-19711952)
chr1 (122-178)||(31444986-31445042)
chr1 (59-178)||(40800530-40800649)
chr1 (88-175)||(4302147-4302234)
chr1 (117-184)||(9881334-9881401)
chr1 (97-200)||(323951-324056)
chr1 (145-178)||(25171240-25171273)
chr1 (121-172)||(32898572-32898623)
chr1 (104-175)||(42367442-42367513)
chr1 (117-171)||(34634965-34635019)
chr1 (129-178)||(7568629-7568678)
chr1 (74-178)||(5068775-5068879)
chr1 (132-200)||(19895289-19895357)
chr1 (132-200)||(21364823-21364891)
chr1 (70-169)||(48526836-48526935)
[»] chr7 (54 HSPs)
chr7 (70-178)||(42890486-42890594)
chr7 (58-178)||(28061658-28061778)
chr7 (59-178)||(36623308-36623427)
chr7 (59-178)||(47156027-47156146)
chr7 (58-184)||(41897987-41898113)
chr7 (70-178)||(7438914-7439022)
chr7 (59-178)||(48602436-48602555)
chr7 (58-178)||(38851990-38852110)
chr7 (70-189)||(36341631-36341750)
chr7 (70-178)||(36585120-36585228)
chr7 (70-178)||(40256068-40256176)
chr7 (59-178)||(40090061-40090180)
chr7 (102-175)||(26161639-26161712)
chr7 (58-178)||(16778504-16778624)
chr7 (59-178)||(20885103-20885222)
chr7 (59-178)||(32431501-32431620)
chr7 (88-178)||(44732041-44732131)
chr7 (59-176)||(41088587-41088704)
chr7 (121-178)||(46103513-46103570)
chr7 (58-178)||(6766693-6766813)
chr7 (70-178)||(7457865-7457972)
chr7 (70-178)||(27045551-27045659)
chr7 (103-178)||(2198646-2198721)
chr7 (88-178)||(35117155-35117244)
chr7 (88-178)||(39130069-39130159)
chr7 (59-178)||(42877386-42877505)
chr7 (88-174)||(30342103-30342189)
chr7 (70-175)||(6174847-6174952)
chr7 (70-175)||(7169137-7169242)
chr7 (70-162)||(3785531-3785623)
chr7 (70-178)||(4131646-4131754)
chr7 (70-178)||(25566691-25566798)
chr7 (59-159)||(46322127-46322227)
chr7 (70-178)||(46479840-46479948)
chr7 (74-164)||(8683833-8683923)
chr7 (121-174)||(11502727-11502780)
chr7 (90-178)||(49101956-49102044)
chr7 (70-175)||(5529022-5529127)
chr7 (102-178)||(5788520-5788596)
chr7 (103-178)||(41134631-41134701)
chr7 (103-178)||(49110613-49110688)
chr7 (132-178)||(21379817-21379863)
chr7 (121-179)||(38767201-38767259)
chr7 (59-139)||(45331915-45331992)
chr7 (121-178)||(3851136-3851193)
chr7 (132-177)||(35570193-35570238)
chr7 (107-175)||(34750550-34750618)
chr7 (121-157)||(42662248-42662284)
chr7 (132-184)||(47525973-47526025)
chr7 (125-172)||(37467456-37467503)
chr7 (132-190)||(4048865-4048923)
chr7 (144-200)||(7380903-7380959)
chr7 (132-172)||(19120679-19120719)
chr7 (132-172)||(23707572-23707612)
[»] chr4 (62 HSPs)
chr4 (52-178)||(38416793-38416919)
chr4 (58-178)||(35381037-35381157)
chr4 (59-178)||(26169986-26170105)
chr4 (59-178)||(55209717-55209836)
chr4 (70-199)||(36523090-36523219)
chr4 (70-178)||(12625262-12625370)
chr4 (70-178)||(44232220-44232328)
chr4 (57-178)||(7614613-7614734)
chr4 (56-165)||(25101717-25101826)
chr4 (57-178)||(38716885-38717005)
chr4 (70-178)||(12240321-12240429)
chr4 (70-178)||(25296723-25296831)
chr4 (59-178)||(29830343-29830462)
chr4 (59-178)||(31010214-31010333)
chr4 (59-178)||(54330833-54330952)
chr4 (59-175)||(2760873-2760989)
chr4 (58-202)||(38721336-38721480)
chr4 (70-178)||(43967734-43967842)
chr4 (59-178)||(17610280-17610399)
chr4 (59-178)||(35686373-35686492)
chr4 (55-178)||(47386429-47386552)
chr4 (70-189)||(27755730-27755853)
chr4 (70-178)||(39307707-39307815)
chr4 (70-178)||(50205754-50205862)
chr4 (70-169)||(3036991-3037090)
chr4 (70-203)||(5428589-5428720)
chr4 (59-178)||(27407760-27407881)
chr4 (89-178)||(45291862-45291951)
chr4 (74-178)||(25918218-25918322)
chr4 (70-172)||(2571031-2571133)
chr4 (88-178)||(26125737-26125827)
chr4 (62-178)||(17446776-17446892)
chr4 (88-166)||(55800863-55800941)
chr4 (75-177)||(56297846-56297948)
chr4 (121-178)||(4467662-4467719)
chr4 (88-200)||(19595734-19595846)
chr4 (70-178)||(20875390-20875498)
chr4 (88-175)||(50620828-50620915)
chr4 (59-178)||(19433501-19433624)
chr4 (88-178)||(55191853-55191943)
chr4 (121-178)||(9029592-9029649)
chr4 (121-178)||(14144600-14144657)
chr4 (69-175)||(23360188-23360291)
chr4 (106-200)||(19903771-19903865)
chr4 (119-184)||(6013154-6013218)
chr4 (90-170)||(29051715-29051793)
chr4 (74-175)||(34316536-34316636)
chr4 (127-200)||(50181128-50181201)
chr4 (90-175)||(10550455-10550542)
chr4 (144-178)||(34652159-34652193)
chr4 (70-160)||(34652208-34652298)
chr4 (56-178)||(37767101-37767223)
chr4 (91-184)||(5472088-5472181)
chr4 (52-176)||(54610855-54610980)
chr4 (96-200)||(29585966-29586069)
chr4 (70-178)||(30446309-30446416)
chr4 (127-178)||(55091330-55091381)
chr4 (102-184)||(56080025-56080108)
chr4 (132-178)||(27344091-27344137)
chr4 (132-169)||(51456506-51456543)
chr4 (90-138)||(8435720-8435768)
chr4 (90-178)||(32871502-32871590)
[»] chr2 (39 HSPs)
chr2 (59-184)||(16865054-16865179)
chr2 (58-178)||(19141209-19141329)
chr2 (59-178)||(8042165-8042284)
chr2 (61-178)||(5404998-5405115)
chr2 (70-178)||(7608060-7608168)
chr2 (70-178)||(7799858-7799966)
chr2 (70-178)||(44365168-44365276)
chr2 (73-178)||(11841736-11841841)
chr2 (58-175)||(39358145-39358262)
chr2 (58-175)||(2183103-2183220)
chr2 (69-184)||(24093673-24093789)
chr2 (70-178)||(6223077-6223185)
chr2 (70-178)||(11931702-11931810)
chr2 (69-175)||(36072184-36072290)
chr2 (58-175)||(42133751-42133868)
chr2 (70-172)||(19262691-19262793)
chr2 (70-178)||(24251971-24252078)
chr2 (69-172)||(43444689-43444792)
chr2 (121-178)||(44644932-44644989)
chr2 (84-175)||(36177723-36177815)
chr2 (70-178)||(33607387-33607491)
chr2 (122-177)||(38839136-38839191)
chr2 (121-178)||(9172289-9172346)
chr2 (57-178)||(22839070-22839191)
chr2 (121-178)||(32774653-32774710)
chr2 (121-178)||(38292014-38292071)
chr2 (58-166)||(9006939-9007047)
chr2 (102-178)||(31610796-31610872)
chr2 (133-200)||(3013817-3013884)
chr2 (105-200)||(7666136-7666231)
chr2 (121-184)||(13117461-13117524)
chr2 (99-178)||(13125288-13125367)
chr2 (75-178)||(36719467-36719565)
chr2 (58-201)||(9553841-9553979)
chr2 (102-141)||(13598484-13598523)
chr2 (105-200)||(19165904-19165999)
chr2 (123-174)||(31904027-31904078)
chr2 (115-169)||(3837271-3837325)
chr2 (132-176)||(4835728-4835772)
[»] chr8 (36 HSPs)
chr8 (58-178)||(616782-616902)
chr8 (58-178)||(623175-623295)
chr8 (58-178)||(42587391-42587511)
chr8 (70-178)||(40494395-40494503)
chr8 (59-178)||(41263810-41263929)
chr8 (70-176)||(3100640-3100746)
chr8 (54-178)||(13216864-13216988)
chr8 (70-178)||(14237291-14237399)
chr8 (70-178)||(18044436-18044544)
chr8 (70-178)||(32998461-32998569)
chr8 (70-178)||(38957181-38957289)
chr8 (70-178)||(2766191-2766299)
chr8 (59-178)||(36642001-36642121)
chr8 (70-178)||(35403527-35403635)
chr8 (59-178)||(132017-132136)
chr8 (90-175)||(5173282-5173367)
chr8 (59-172)||(5878317-5878429)
chr8 (59-178)||(8394346-8394465)
chr8 (88-178)||(11637811-11637901)
chr8 (88-184)||(6414102-6414198)
chr8 (74-177)||(4270236-4270339)
chr8 (88-178)||(22489416-22489507)
chr8 (78-184)||(18090348-18090453)
chr8 (70-178)||(9632166-9632274)
chr8 (122-178)||(18035163-18035219)
chr8 (132-200)||(40716644-40716712)
chr8 (105-199)||(8181935-8182030)
chr8 (59-178)||(40204865-40204984)
chr8 (112-178)||(24729908-24729974)
chr8 (121-178)||(33700216-33700273)
chr8 (129-178)||(38497142-38497191)
chr8 (74-178)||(3370399-3370503)
chr8 (90-161)||(24524131-24524202)
chr8 (144-200)||(32855583-32855639)
chr8 (57-165)||(36167074-36167182)
chr8 (54-110)||(13217232-13217288)
[»] chr6 (40 HSPs)
chr6 (58-178)||(17213927-17214047)
chr6 (57-178)||(19088101-19088222)
chr6 (70-178)||(22054783-22054891)
chr6 (58-178)||(32414822-32414942)
chr6 (59-178)||(24624084-24624203)
chr6 (58-178)||(4147930-4148050)
chr6 (54-178)||(29790201-29790325)
chr6 (70-201)||(4440861-4440992)
chr6 (59-178)||(6563226-6563345)
chr6 (55-178)||(18668831-18668954)
chr6 (70-203)||(17155160-17155293)
chr6 (70-178)||(15383073-15383181)
chr6 (70-178)||(20226441-20226549)
chr6 (70-178)||(22120425-22120533)
chr6 (89-178)||(1040854-1040943)
chr6 (70-178)||(15337499-15337607)
chr6 (70-178)||(17257794-17257902)
chr6 (58-178)||(32671815-32671935)
chr6 (69-178)||(28477763-28477872)
chr6 (90-175)||(3623856-3623940)
chr6 (73-178)||(3989407-3989511)
chr6 (70-175)||(31869719-31869824)
chr6 (69-176)||(29693893-29694000)
chr6 (90-172)||(19240741-19240823)
chr6 (88-178)||(24955539-24955629)
chr6 (117-178)||(12226033-12226094)
chr6 (103-178)||(2360034-2360109)
chr6 (59-178)||(25475956-25476070)
chr6 (116-178)||(5495306-5495368)
chr6 (69-175)||(21540775-21540881)
chr6 (70-172)||(31569175-31569277)
chr6 (121-178)||(23158052-23158109)
chr6 (123-175)||(8101664-8101716)
chr6 (75-178)||(20437156-20437260)
chr6 (121-175)||(10298719-10298773)
chr6 (121-177)||(1260492-1260548)
chr6 (70-178)||(10520479-10520587)
chr6 (125-186)||(28556737-28556798)
chr6 (150-178)||(16193025-16193053)
chr6 (132-200)||(26567265-26567333)
[»] chr3 (40 HSPs)
chr3 (70-178)||(21797567-21797675)
chr3 (58-178)||(42490339-42490459)
chr3 (59-178)||(13499478-13499597)
chr3 (70-203)||(44561795-44561928)
chr3 (58-178)||(27010617-27010737)
chr3 (58-178)||(39866284-39866404)
chr3 (59-178)||(42761626-42761745)
chr3 (70-178)||(27334874-27334982)
chr3 (58-178)||(33415798-33415918)
chr3 (97-178)||(30213842-30213923)
chr3 (58-178)||(20765195-20765315)
chr3 (70-178)||(54507652-54507760)
chr3 (89-178)||(38137854-38137943)
chr3 (55-178)||(21005289-21005412)
chr3 (70-177)||(34912286-34912393)
chr3 (64-178)||(33803526-33803641)
chr3 (105-178)||(52167255-52167328)
chr3 (70-178)||(6910345-6910453)
chr3 (128-203)||(44856415-44856490)
chr3 (59-178)||(48334664-48334782)
chr3 (88-178)||(36227574-36227664)
chr3 (59-178)||(19823900-19824013)
chr3 (121-178)||(15332949-15333006)
chr3 (70-175)||(41252909-41253014)
chr3 (102-178)||(43181498-43181575)
chr3 (70-178)||(43467885-43467993)
chr3 (105-175)||(25527450-25527520)
chr3 (102-175)||(3430420-3430493)
chr3 (117-177)||(33128063-33128123)
chr3 (79-184)||(20410098-20410201)
chr3 (121-178)||(41751553-41751610)
chr3 (57-177)||(19327474-19327594)
chr3 (107-175)||(23940508-23940576)
chr3 (56-175)||(37766044-37766168)
chr3 (123-178)||(17643795-17643850)
chr3 (117-164)||(27813445-27813492)
chr3 (120-170)||(3017852-3017902)
chr3 (116-178)||(15568078-15568140)
chr3 (121-175)||(55264659-55264713)
chr3 (115-171)||(23224306-23224363)
[»] scaffold0056 (1 HSPs)
scaffold0056 (59-178)||(70961-71079)
[»] scaffold0018 (1 HSPs)
scaffold0018 (70-178)||(67912-68020)
[»] scaffold0003 (1 HSPs)
scaffold0003 (58-178)||(161980-162100)
[»] scaffold0022 (1 HSPs)
scaffold0022 (55-178)||(100790-100913)
[»] scaffold0295 (1 HSPs)
scaffold0295 (58-178)||(13860-13980)
[»] scaffold0262 (1 HSPs)
scaffold0262 (70-178)||(22791-22899)
[»] scaffold0225 (1 HSPs)
scaffold0225 (70-178)||(8976-9084)
[»] scaffold0029 (1 HSPs)
scaffold0029 (70-178)||(138173-138281)
[»] scaffold0595 (1 HSPs)
scaffold0595 (121-172)||(4010-4061)
[»] scaffold0099 (1 HSPs)
scaffold0099 (121-175)||(28798-28852)
[»] scaffold0608 (1 HSPs)
scaffold0608 (127-200)||(1588-1661)
[»] scaffold0009 (2 HSPs)
scaffold0009 (121-200)||(53541-53620)
scaffold0009 (132-178)||(217018-217064)


Alignment Details
Target: chr5 (Bit Score: 138; Significance: 5e-72; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 39776588 - 39776772
Alignment:
Q  17 aaaaaggaagtttacaaaaatatttgagaacttactgaaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgat 116  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |     
T  39776588 aaaaaggaattttacaaaaatatttgagaacttagtgaaatatactccctcgatttcaaaatacatttcgtatttttgcaatgtacactattcacataac 39776687  T
Q  117 ttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatatttacag 204  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |   ||||| ||||||||||||||||||||||||    
T  39776688 ttattttgaccgtactttttaactaacatataaatacaaatattagcatgtaaaa---tgttcgatttatttcagtaaatatttacag 39776772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 203
Target Start/End: Complemental strand, 38916513 - 38916368
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||| ||||||||| ||| ||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||    
T  38916513 atactccctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaat 38916414  T
Q  158 attagcatgtaagatgttgttccatttatttcagtaaatatttaca 203  Q
     ||||||||| ||||||| ||| |||| ||||  ||||||||||||    
T  38916413 gttagcatgtgagatgttattcgatttgtttcgataaatatttaca 38916368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 30355136 - 30355017
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||| ||||||||||||| ||  ||||||||||||| |||||||||  ||||||| ||| ||||||| |||||||||| ||||||||||||||    
T  30355136 atactccctcg-tttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaat 30355038  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  30355037 attagcatgtaagatgttgtt 30355017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 978077 - 978196
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 978176  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  978177 ttagcatgtaagatgttgtt 978196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 33387219 - 33387339
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    |||||||||| |||| ||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||| ||||||||||||||| ||||||||||||||    
T  33387219 atactccctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 33387318  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  33387319 attagcatgtaagatgttgtt 33387339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 9502889 - 9502770
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||| ||||||||| |   ||||||||||| | |||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  9502889 tactccctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 9502790  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  9502789 ttagcatgtaagatgttgtt 9502770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 8086293 - 8086173
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||| ||||||||||||||| ||||||||||||||    
T  8086293 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 8086194  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||| ||||||||||||||||    
T  8086193 attaacatgtaagatgttgtt 8086173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 39776856 - 39776924
Alignment:
Q  321 taactaacatgttttctaatttgctttgctcttcaaataccaacaatactaatgattatttattattttc 390  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776856 taactaacatgttt-ctaatttgctttgctcttcaaataccaacaatactaatgattatttattattttc 39776924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 14634408 - 14634300
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | ||||| |||  ||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  14634408 tttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagcatgtaa 14634309  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  14634308 gatgttgtt 14634300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 33587720 - 33587612
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | || ||||||| ||| ||| |||||||||| |||||||||||  ||||||||||||||||| |||||||    
T  33587720 tttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatattaacatgtaa 33587621  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  33587620 gatgttgtt 33587612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 11251145 - 11251230
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    ||||||||| | |||||||||  ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  11251145 ttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacgatgtt 11251230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 24992400 - 24992281
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| || || |||| |||| | ||||||||| ||   ||| |||||||||| |||||||||||  ||||||||||||||    
T  24992400 tactccctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaata 24992301  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||| ||||||||||||    
T  24992300 ttagcatataagatgttgtt 24992281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 40156198 - 40156317
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  | ||||||||| | |||||||||  ||| ||| ||| |||||| ||||||| |||  ||||||||||||||    
T  40156198 tactccctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaata 40156297  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  40156298 ttagcatgtaagatgttgtt 40156317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 3472528 - 3472420
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   ||||||||||| | ||||||| |  ||| ||| |||||||||| |||||||||||   ||||||||||||||||||||||||    
T  3472528 tttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgtaa 3472429  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  3472428 gatgttgtt 3472420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 18094346 - 18094224
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    ||||||||||||  ||||||||||||| |   ||||||||||| | || ||||||  | | ||| ||| |  |||||||||||||||  |||||||||||    
T  18094346 atatactccctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaa 18094247  T
Q  156 atattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||||    
T  18094246 atattagcatgtaagatgttgtt 18094224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 11761128 - 11761185
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  11761128 tttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgtt 11761185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 32400400 - 32400468
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  |||| | ||| |||||||||    
T  32400400 tttttaactaatatataaatacaaatattagcatgtaagatgttgtttaatttgtctcaataaatattt 32400468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 12007894 - 12007775
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||| ||||||  | | | ||||||| | |||| ||| ||||||| |||||||||| ||| ||||||||||||||     
T  12007894 tactccctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatg 12007795  T
Q  159 ttagcatgtaagatgttgtt 178  Q
     |||||||||| ||||||||    
T  12007794 ctagcatgtaaaatgttgtt 12007775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 11785978 - 11785868
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac-aaatattagcatgt 167  Q
    |||||||||||||| |   ||||||||||| |  ||||||||  ||| ||| ||||| ||||||||||||||||  ||||||||| |||||||| |||||    
T  11785978 atttcaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaaaatattaccatgt 11785879  T
Q  168 aagatgttgtt 178  Q
    |||||||||||    
T  11785878 aagatgttgtt 11785868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 13812062 - 13812156
Alignment:
Q  74 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 168  Q
    ||||||||| |||||||||| ||||||  | |||||| || ||||||||| | |||| ||||||||||| |||| |||||||||||||| |||||    
T  13812062 aaaatacatatcgtatttttacaatatgtattattcacataatttattttaatcatattttttaactaatatatcaatacaaatattagtatgta 13812156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 7224227 - 7224284
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||    
T  7224227 tttgaccatactttctaactaatttataaatacaaatattagcatgtaaaatgttgtt 7224284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 9050768 - 9050719
Alignment:
Q  129 tactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  9050768 tactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 9050719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 34111959 - 34112075
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    |||||||| |||  ||||||||||||| ||   |||||||||| | |||||||||  ||| ||| |||||| ||| ||||| |||||  |||||||||||    
T  34111959 atatactctctccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaa 34112058  T
Q  156 atattagcatgtaagat 172  Q
    |||||| ||||||||||    
T  34112059 atattatcatgtaagat 34112075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 32017275 - 32017330
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttg 176  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  32017275 tttgatcatattttttaactaatatataaatacaaatgttagcatgtaagatgttg 32017330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 39776826 - 39776869
Alignment:
Q  251 gtgttgtcatttctcaatctctgaatttaattactaacatgttt 294  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  39776826 gtgttgtcatttctcaatctctgaatttaataactaacatgttt 39776869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 18998744 - 18998806
Alignment:
Q  116 tttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| ||| |||||| ||||||||||| |||||||||||||| |||| |||||||||||||||    
T  18998744 tttactttaaccatattttttaactaatatataaatacaaatgttagtatgtaagatgttgtt 18998806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 35825006 - 35825060
Alignment:
Q  103 actattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||| |||||||||||||||| |||||||| || ||||||||||||||    
T  35825006 actattcatataatttattttgaccataatttttaaccaatatataaatacaaat 35825060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 26387079 - 26387022
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||| |||| ||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  26387079 tttgatcatattttttaactaacatataaatataaatgttagcatttaagatgttgtt 26387022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 3422399 - 3422355
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttg 176  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  3422399 tttttaactaatatataaatacaaatgttagcatgtaagatgttg 3422355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 37495621 - 37495712
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatta 161  Q
    ||||||||||||||| ||| ||||  ||||| ||||||||  ||   ||| ||||| |||| ||||||||||| ||||||||||||||||||    
T  37495621 tttcaaaatacattttgtaattttataatatgcactattctcatatcttactttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 12447616 - 12447561
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||  | ||||||||  ||||||||||||||||||||||    
T  12447616 tttgaccatactttttaactaatgtttaaataca--tattagcatgtaagatgttgtt 12447561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 20692592 - 20692541
Alignment:
Q  118 tattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 171  Q
    |||||||||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  20692592 tattttgaccatactttttaaccaa--tataaatacaaatattaacatgtaaga 20692541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 24916435 - 24916389
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||    
T  24916435 tttttaactaatttataaatacaaatattagcatataagatgttgtt 24916389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 27109757 - 27109807
Alignment:
Q  128 atactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||| |||  || |||||||||||||||||||||||||||||||    
T  27109757 atactttttaattaatgtaaaaatacaaatattagcatgtaagatgttgtt 27109807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 25330234 - 25330325
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaac-atataaatacaaatattag 162  Q
    ||||||||||||||||| |||||| | ||||| | ||||||||| ||||||||||||  || ||||||| || | |||||||||||||||||||    
T  25330234 tttcaaaatacatttcgcatttttactatataaattattcatataatttattttgacttta-tttttaa-tatctatataaatacaaatattag 25330325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 27579619 - 27579579
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  27579619 tttttaactaatatataaatacaaatgttagcatgtaagat 27579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 40268020 - 40267941
Alignment:
Q  95 caatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||||| ||||||| | ||  ||||||||||||||| ||||||| ||| | ||| |||||||| |||||||||||||||||    
T  40268020 caatatgcactatttacatagtttattttgaccata-tttttaattaatacatagatacaaatgttagcatgtaagatgtt 40267941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 5947816 - 5947697
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    ||||| ||| || |||| ||||||||| ||  |||||  | ||||||| |||||| || | ||| |||||| ||| |||||| |||||||||||||||||    
T  5947816 atataatccatccattttaaaatacatgtcacattttcacgatatacattattcacataacttactttgacaatattttttagctaacatataaatacaa 5947717  T
Q  156 atattagcatgtaagatgtt 175  Q
    || | ||||| ||| |||||    
T  5947716 atctaagcatataaaatgtt 5947697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 12456834 - 12456783
Alignment:
Q  127 catactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| ||||||||||| ||| |||||||||| |||| |||||||||||||||    
T  12456834 catattttttaactaatatacaaatacaaatgttagtatgtaagatgttgtt 12456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 18598541 - 18598620
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttt 135  Q
    ||||||||| ||  ||||||||||||| ||| ||||||||||| | || |||| | |||| ||| |||||||||||||||    
T  18598541 atatactccatctgtttcaaaatacatgtcgcatttttgcaatgtgcattattgacatgaattactttgaccatactttt 18598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 12360010 - 12359964
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||| |||||||||||||| |||||||| ||||| |||||    
T  12360010 tttttaactaatatataaatacaaatgttagcatgaaagatattgtt 12359964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 2825298 - 2825242
Alignment:
Q  144 atataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||||||| |||| ||||||| ||||||||||||| |||||| ||| | |||||||    
T  2825298 atataaatagaaatgttagcatataagatgttgttcgatttatctcaatgaatattt 2825242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 7750138 - 7750066
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaacta 141  Q
    |||| ||||||||  ||||| |||| |||| | |||||||||||| |||||||||||  ||| ||||||||||    
T  7750138 attttaaaatacacgtcgtaattttacaatgtgcactattcatataatttattttgattatattttttaacta 7750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 11641334 - 11641210
Alignment:
Q  54 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac 153  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||    
T  11641334 aaatatactccctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatac 11641235  T
Q  154 aaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||||||    
T  11641234 aaatattagcatgtaagatgttgtt 11641210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 6402673 - 6402553
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||    
T  6402673 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaat 6402574  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  6402573 attagcatgtaagatgttgtt 6402553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 36757750 - 36757629
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    |||||||| || |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||    
T  36757750 tatactccatccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaa 36757651  T
Q  157 tattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||    
T  36757650 tattagcatgtaagatgttgtt 36757629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 40772037 - 40771915
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    ||||||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||||||| ||||||||||||||||||||||  |||||||||||    
T  40772037 atatactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaa 40771938  T
Q  156 atattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||||    
T  40771937 atattagcatgtaagatgttgtt 40771915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 28030932 - 28030803
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| | | ||||||||||| | || |||| | |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28030932 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgtaa 28030833  T
Q  170 gatgttgttccatttatttcagtaaatatt 199  Q
    ||| |||||| |||| ||||  ||||||||    
T  28030832 gatattgttcaatttgtttcgataaatatt 28030803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 6766369 - 6766488
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    ||||||||||||  ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||    
T  6766369 atatactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaa 6766468  T
Q  156 atattagcatgtaagatgtt 175  Q
    ||||||||||||||||||||    
T  6766469 atattagcatgtaagatgtt 6766488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 16120707 - 16120583
Alignment:
Q  54 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac 153  Q
    |||| |||||||||  ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  |||||||||    
T  16120707 aaatttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatac 16120608  T
Q  154 aaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||||||    
T  16120607 aaatattagcatgtaagatgttgtt 16120583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 30003531 - 30003652
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    |||||||| ||  ||||||||||||| ||  ||||||| ||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||    
T  30003531 tatactccatccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 30003630  T
Q  157 tattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||    
T  30003631 tattagcatgtaagatgttgtt 30003652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 203
Target Start/End: Complemental strand, 44647976 - 44647831
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    |||||||||| |||| ||||||||| ||| |||||| |||| |  | |||||| |||| ||||||||| |||| |||||||| || ||||||||||||||    
T  44647976 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaat 44647877  T
Q  158 attagcatgtaagatgttgttccatttatttcagtaaatatttaca 203  Q
     ||||||||||||||||||||| |||| ||||  ||| ||||||||    
T  44647876 gttagcatgtaagatgttgttcaatttgtttcgataactatttaca 44647831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 17305953 - 17306073
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||| ||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||| ||||||||||| ||| ||||||||||||||    
T  17305953 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaat 17306052  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  17306053 attagcatgtaagatgttgtt 17306073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 38153529 - 38153397
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 168  Q
    |||||||||||||| ||| ||||||  ||| | ||||||||| |||| ||| | | ||||||||||||||||||||||||||||||||| ||| ||||||    
T  38153529 atttcaaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgta 38153430  T
Q  169 agatgttgttccatttatttcagtaaatattta 201  Q
    ||||||| ||| |||| ||||  ||||||||||    
T  38153429 agatgttcttcgatttgtttcgataaatattta 38153397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 42788805 - 42788685
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    |||||||||| ||||||||||| || ||  ||||||| ||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  42788805 atactccctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 42788706  T
Q  158 attagcatgtaagatgttgtt 178  Q
    ||| |||||||||||||||||    
T  42788705 atttgcatgtaagatgttgtt 42788685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 27292637 - 27292756
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    |||| |||||||  |||||||||| || ||  ||||||||||| | |||||||||  ||||||| |||||| |||||||||||||||  |||||||||||    
T  27292637 atatgctccctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaa 27292736  T
Q  156 atattagcatgtaagatgtt 175  Q
    ||||||||||||||||||||    
T  27292737 atattagcatgtaagatgtt 27292756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 24321257 - 24321380
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatac--tttttaactaacatataaataca 154  Q
    |||||||||||  ||| ||||||||| ||| ||||||||||| | |||||||||  ||||||| ||||||||||   |||||||||||  ||||||||||    
T  24321257 tatactccctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaataca 24321356  T
Q  155 aatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||| |||||    
T  24321357 aatattagcatgtaagatattgtt 24321380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 30701717 - 30701837
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||| ||| | |||||||||  ||| ||| |||||||||| |||||||||||  |||||||||||||    
T  30701717 atactccctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaat 30701816  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||| ||||||||||||||    
T  30701817 attagcgtgtaagatgttgtt 30701837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 40977736 - 40977631
Alignment:
Q  73 caaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    |||||||||| ||  ||||||||||| |  ||||||||  ||| | | ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  40977736 caaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 40977637  T
Q  173 gttgtt 178  Q
    ||||||    
T  40977636 gttgtt 40977631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 36399109 - 36399217
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  | | ||| |||||||||| |||||||||||  ||||||||||||||||||| |||||    
T  36399109 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaa 36399208  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  36399209 gatgttgtt 36399217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 26910073 - 26910195
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    ||||| |||||| |||| ||||||||| |   ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||    
T  26910073 atatattccctccattttaaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaa 26910172  T
Q  156 atattagcatgtaagatgttgtt 178  Q
    |||||| |||| |||||| ||||    
T  26910173 atattaacatgcaagatgatgtt 26910195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 52024025 - 52024145
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| |   ||||||||||| | |||||||||  | | ||| |||||||||| |||||||||||  |||||||| ||||    
T  52024025 atactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaat 52024124  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||| ||||||||||||||    
T  52024125 attagcgtgtaagatgttgtt 52024145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 42735419 - 42735308
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatacttttt---aactaacatataaatacaaatattagcatg 166  Q
    ||||||||||||| |   ||| ||||||| | |||||||||  ||| ||| ||||||||||||||||   |||||| |||||||||||||||||||||||    
T  42735419 tttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaatattagcatg 42735320  T
Q  167 taagatgttgtt 178  Q
    ||||||| ||||    
T  42735319 taagatgatgtt 42735308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 3485454 - 3485350
Alignment:
Q  74 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatg 173  Q
    ||||||||| ||||| |||| |||||| ||||||||  || | ||| ||||| |||| ||||||||||| |||||||||||||| ||| |||||||| ||    
T  3485454 aaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgtaaggtg 3485355  T
Q  174 ttgtt 178  Q
    |||||    
T  3485354 ttgtt 3485350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 9342896 - 9342788
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    |||||||| |||| ||  ||||||||||| | |  ||||||  ||| ||| ||||| |||| |||||||||||  |||||||||||||||||||||||||    
T  9342896 tttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcatgtaa 9342797  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  9342796 gatgttgtt 9342788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 15382677 - 15382569
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||| | |||| |||| ||||||||||| || | ||| | ||||||   ||||||| ||| ||||||||||||||||||| ||||||    
T  15382677 tttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagtatgtaa 15382578  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  15382577 gatgttgtt 15382569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 30385407 - 30385291
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||| || |||| ||||||||| ||| | ||||  ||| | ||||||||| ||  |||| |||||||||| ||||||||||| ||||||||||||||     
T  30385407 tactccatctattttaaaatacatgtcgcaattttataatgtgcactattcacatagtttactttgaccatattttttaactaatatataaatacaaatg 30385308  T
Q  159 ttagcatgtaagatgtt 175  Q
    |||| ||||||||||||    
T  30385307 ttagtatgtaagatgtt 30385291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 14777078 - 14777173
Alignment:
Q  105 tattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    |||||||||  |||| ||||| |||| |||||||||   ||||||||||||||||||  |||||||||||||||  |||||||||||| |||||||    
T  14777078 tattcatatagtttactttgatcatattttttaactgttatataaatacaaatattaatatgtaagatgttgtttgatttatttcagttaatattt 14777173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 48375031 - 48375114
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 171  Q
    ||||||||||| |||| ||||||  | | ||||||||| |||| |||||||||||  |||||||||||||||||||||||||||    
T  48375031 atttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaaga 48375114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 15912585 - 15912479
Alignment:
Q  72 tcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 171  Q
    ||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||| | | |  | |||||||||||||||||||||||||    
T  15912585 tcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaaga 15912486  T
Q  172 tgttgtt 178  Q
    |||||||    
T  15912485 tgttgtt 15912479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 44644618 - 44644510
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    |||||||||| |||| ||||||||| ||| |||||| |||| |  | |||||| |||| ||| ||||| |||| |||||||| || ||||||||||||||    
T  44644618 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaat 44644519  T
Q  158 attagcatg 166  Q
     ||||||||    
T  44644518 gttagcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 22575781 - 22575730
Alignment:
Q  127 catactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  22575781 catattttttaactaatatataaatacaaatgttagcatgtaagatgttgtt 22575730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 19711952 - 19711810
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    |||||||||||  ||||||||||||| ||| ||||||||||  | ||||||| |  ||| ||    | || ||| ||||||||||||||||||||||||     
T  19711952 tatactccctctgtttcaaaatacatatcgcatttttgcaacgtgcactatttacgtgactt----taactatattttttaactaacatataaatacaag 19711857  T
Q  157 tattagcatgtaagatgttgttccatttatttcagtaaatatttaca 203  Q
    |  |||||||||||||| ||||  |||| ||||  ||||||||||||    
T  19711856 tgatagcatgtaagatgctgttaaatttgtttcgataaatatttaca 19711810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 31444986 - 31445042
Alignment:
Q  122 ttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||| ||||||||||| ||||||| |||||| || |||||||||||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgtt 31445042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 40800649 - 40800530
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaat 157  Q
    ||||| ||| ||||||||||| || ||||| |||| |||| | || || ||| || | ||| |||||||||| ||||| |||||| |||||| |||||||    
T  40800649 tactctctccatttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatataa-tacaaat 40800551  T
Q  158 attagcatgtaagatgttgtt 178  Q
     ||||||||||||||||||||    
T  40800550 gttagcatgtaagatgttgtt 40800530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 4302147 - 4302234
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    ||||||||||| ||||||||| |  ||| ||| |||||  ||  |||||||||||  |||||||| ||||||||||||||||||||||    
T  4302147 atttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaatattagcatgtaagatgtt 4302234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 9881334 - 9881401
Alignment:
Q  117 ttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccattt 184  Q
    ||||||| |||||| ||||||||||| ||||| ||| |||| ||| ||||||||||||||||| ||||    
T  9881334 ttattttaaccataatttttaactaatatatacatataaatgttatcatgtaagatgttgttcgattt 9881401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 323951 - 324056
Alignment:
Q  97 atatacactattcatatgatttattttgaccatacttt--ttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaa 194  Q
    ||||||| ||||||||| |||||||||||  ||  |||  |||||| | ||||||||||||||||||||||||||  ||| |||| |||| ||||  |||    
T  323951 atatacattattcatataatttattttgataatgatttgtttaacttatatataaatacaaatattagcatgtaaattgtagttcgatttgtttcgataa 324050  T
Q  195 atattt 200  Q
    ||||||    
T  324051 atattt 324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 25171240 - 25171273
Alignment:
Q  145 tataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||||||||||||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgtt 25171273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 32898572 - 32898623
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    |||||||||| |||||||  |||||||||||| ||||||||| |||||||||    
T  32898572 tttgaccataatttttaagcaacatataaatataaatattagtatgtaagat 32898623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 42367513 - 42367442
Alignment:
Q  104 ctattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||||||  ||| ||| ||||| |||| |||||||||||  |||||||||||||| || |||||||||||||    
T  42367513 ctattcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacatgtaagatgtt 42367442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 34634965 - 34635019
Alignment:
Q  117 ttattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 171  Q
    |||||||||  ||| ||||||||||| |||||||||||||| ||| |||||||||    
T  34634965 ttattttgataatattttttaactaatatataaatacaaatgttaacatgtaaga 34635019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 7568678 - 7568629
Alignment:
Q  129 tactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||| ||||||||| |||| ||||  ||||||||||||||    
T  7568678 tactttttaactaatatataaatataaatgttagtgtgtaagatgttgtt 7568629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 5068775 - 5068879
Alignment:
Q  74 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatg 173  Q
    ||||||||| || |||||||  ||||  ||||||| |||| |||||||||||  ||| |||| || ||| ||||||||| ||||  ||  ||||||||||    
T  5068775 aaaatacatgtcatatttttataatactcactatttatataatttattttgattatatttttaaattaatatataaatataaatgataaaatgtaagatg 5068874  T
Q  174 ttgtt 178  Q
    |||||    
T  5068875 ttgtt 5068879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 19895289 - 19895357
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||||| ||| ||||||| ||||||||||  ||||||||||||||||  ||||| ||  |||||||||    
T  19895289 tttttaattaatatataaacacaaatattaatatgtaagatgttgttcgttttatctcgataaatattt 19895357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 21364823 - 21364891
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||||||| | ||| ||||||| || ||||||||||| ||||||||| || ||| ||| |||||||||    
T  21364823 tttttaacttatatagaaatacatatgttagcatgtaatatgttgttcgatctatctcaataaatattt 21364891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 48526935 - 48526836
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaaca-tataaatacaaatattagcatgta 168  Q
    |||||||||| || | | ||||||||||| |||| |||| | |||||||| |||||||||| ||||||| ||| | |||||||| |||| |||| |||||    
T  48526935 tttcaaaatagatattgcatttttgcaatgtacattatttacatgatttactttgaccata-tttttaattaatattataaatataaatgttagtatgta 48526837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 42890594 - 42890486
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42890594 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaa 42890495  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  42890494 gatgttgtt 42890486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 28061778 - 28061658
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  28061778 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 28061679  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  28061678 attagcatgtaagatgttgtt 28061658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 36623308 - 36623427
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  36623308 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 36623407  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  36623408 ttagcatgtaagatgttgtt 36623427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 47156027 - 47156146
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  47156027 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 47156126  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  47156127 ttagcatgtaagatgttgtt 47156146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 184
Target Start/End: Original strand, 41897987 - 41898113
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||| |||||||||||||||| ||||||||||||||    
T  41897987 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaat 41898086  T
Q  158 attagcatgtaagatgttgttccattt 184  Q
    ||||||||||||||||||||| |||||    
T  41898087 attagcatgtaagatgttgtttcattt 41898113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 7438914 - 7439022
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||||| || ||||||  ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7438914 tttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 7439013  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  7439014 gatgttgtt 7439022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 48602436 - 48602555
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  |||||||||||||  |  |||||| |||| | |||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  48602436 tactccctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 48602535  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  48602536 ttagcatgtaagatgttgtt 48602555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 38852110 - 38851990
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  38852110 atactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 38852011  T
Q  158 attagcatgtaagatgttgtt 178  Q
    ||||||||||||||| |||||    
T  38852010 attagcatgtaagatattgtt 38851990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 36341631 - 36341750
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||| ||||||||||| | ||||||||| |||| ||| ||| || ||||||||||||||||||||||||| |||| |||| ||||||    
T  36341631 tttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatgttagaatgtaa 36341730  T
Q  170 gatgttgttccatttatttc 189  Q
    |||||||||| |||| ||||    
T  36341731 gatgttgttcgatttgtttc 36341750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 36585120 - 36585228
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||||||| ||||||||||| ||||||  |||||||||||||||||||||||||    
T  36585120 tttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaatattagcatgtaa 36585219  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  36585220 gatgttgtt 36585228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 40256068 - 40256176
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | | |||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40256068 tttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 40256167  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  40256168 gatgttgtt 40256176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 40090180 - 40090061
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||| |||||| || ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  40090180 tactccctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 40090081  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  40090080 ttagcatgtaagatgttgtt 40090061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 26161639 - 26161712
Alignment:
Q  102 cactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    ||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  26161639 cactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatattagcatgtaaaatgtt 26161712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 16778504 - 16778624
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  | ||||||||| | |||||||||  ||  ||| |||||||||| |||||||||||  |||||||||||||    
T  16778504 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaat 16778603  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  16778604 attagcatgtaagatgttgtt 16778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 20885103 - 20885222
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  |||||| |||| |  ||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 20885202  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  20885203 ttagcatgtaagatgttgtt 20885222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 32431620 - 32431501
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  |||||||||| || ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||    
T  32431620 tactccctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 32431521  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    |||| |||||||||||||||    
T  32431520 ttagtatgtaagatgttgtt 32431501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 44732041 - 44732131
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||| | |||||||||  ||| ||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  44732041 atttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 44732131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 41088587 - 41088704
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    ||||||||| |||||||||||||| ||  | |||| |||||| |||| ||||| ||| ||| |||||||||| |||||||||||  ||||||| ||||||    
T  41088587 tactccctccatttcaaaatacatgtccaaattttacaatatgcactgttcatctgacttactttgaccatattttttaactaatgtataaatgcaaata 41088686  T
Q  159 ttagcatgtaagatgttg 176  Q
    ||| ||||||||||||||    
T  41088687 ttaacatgtaagatgttg 41088704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 46103570 - 46103513
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46103570 tttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtt 46103513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 6766813 - 6766693
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||| | |||| |||| | || |||||| || | |||||||||||||| |||||||||||  ||||||| |||||    
T  6766813 atactccctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaat 6766714  T
Q  158 attagcatgtaagatgttgtt 178  Q
     ||||||||||||||||||||    
T  6766713 gttagcatgtaagatgttgtt 6766693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 7457972 - 7457865
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  | ||||||||| | |||||||||  | | ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7457972 tttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 7457874  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  7457873 gatgttgtt 7457865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 27045659 - 27045551
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| | | | |||| |||| || |||||||| ||| |||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||    
T  27045659 tttcaaaatacatgttgcaattttacaatgtatactattcacatggtttactttgaccatattttttaactaatatataaatacaaatgttagcatataa 27045560  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  27045559 gatgttgtt 27045551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 2198646 - 2198721
Alignment:
Q  103 actattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||| || |||||||||||||    
T  2198646 actattcatctgatttattttgaacatactttttaactaatgtataaatacaaatattaacaagtaagatgttgtt 2198721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 35117155 - 35117244
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||||| |||||||||  ||| ||| ||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||    
T  35117155 atttttgcaatatgcactattcacttgacttactttgaccatactttt-aactaatgtataaatataaatattagcatgtaagatgttgtt 35117244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 39130159 - 39130069
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||| | |||||||||  ||| ||  |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  39130159 atttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 39130069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 42877386 - 42877505
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  | ||||| ||| | ||||||| || | | ||| ||||||||||||||||||||||  |||||||| |||||    
T  42877386 tactccctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaata 42877485  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    |||| |||||||||||||||    
T  42877486 ttagaatgtaagatgttgtt 42877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 30342103 - 30342189
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgt 174  Q
    ||||||||||| | || ||||||  ||||||| |||||| |||||||||||||||  |||||||||||||||||| |||||||||||    
T  30342103 atttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtatgtaagatgt 30342189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 6174847 - 6174952
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    |||||||||| || ||  ||||||||||  | |||||||||| ||| ||| | |||||||| |||||||||||  |||||||||||| ||||||||||||    
T  6174847 tttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacattagcatgtaa 6174946  T
Q  170 gatgtt 175  Q
    ||||||    
T  6174947 gatgtt 6174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 7169137 - 7169242
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| || || ||||||||| |    |||||| |||||||| |||||| ||| ||||||||||| |||||||||||||||||| ||| |||    
T  7169137 tttcaaaatacatgtcataattttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaaatattaacatataa 7169236  T
Q  170 gatgtt 175  Q
    ||||||    
T  7169237 gatgtt 7169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 3785531 - 3785623
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattag 162  Q
    ||||||||||||| || || |||  |||||| ||||||||||||  |||| |||||||||| ||||||||||| |||||||||||||| ||||    
T  3785531 tttcaaaatacatatcataatttcacaatatgcactattcatatagtttactttgaccatattttttaactaatatataaatacaaatgttag 3785623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 4131754 - 4131646
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    |||||||||| || ||| | |||| |||| || |||||||| || | ||| ||| |||||| ||||||||||| |||||||||||||  |||||||||||    
T  4131754 tttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagcatgtaa 4131655  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  4131654 gatgttgtt 4131646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 25566798 - 25566691
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||| |||||||  ||| ||||||||||||||||||| |    
T  25566798 tttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaatattagcatgtga 25566700  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  25566699 gatgttgtt 25566691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 46322227 - 46322127
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    ||||||||| |||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  ||| ||||||||||    
T  46322227 tactccctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaata 46322128  T
Q  159 t 159  Q
    |    
T  46322127 t 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 46479840 - 46479948
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   |||||| |||| | ||||||||   ||| ||| |||||||| | |||||||||||  |||||||||||||||||||||||||    
T  46479840 tttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgtaa 46479939  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  46479940 gatgttgtt 46479948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 8683833 - 8683923
Alignment:
Q  74 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagca 164  Q
    ||||||||| ||  ||||||| ||| | || ||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  8683833 aaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca 8683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 11502780 - 11502727
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgt 174  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  11502780 tttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatgt 11502727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 49102044 - 49101956
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| |||||| |||||||||||| | |||||||   |||| ||||||||||| | |||||||||||| || |||||||||||||||||    
T  49102044 ttttacaatatgcactattcatataacttatttttgtcatattttttaactaatacataaatacaaatttttgcatgtaagatgttgtt 49101956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 5529022 - 5529127
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| || || |||| |||| ||||||||| |  |   |||||||||| ||| ||||||||||| ||| ||||| |||| |||||||||||    
T  5529022 tttcaaaatacatgtcctaattttacaatgtacactatttacgtagattattttgactatattttttaactaatatacaaataaaaatgttagcatgtaa 5529121  T
Q  170 gatgtt 175  Q
    ||||||    
T  5529122 gatgtt 5529127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 5788596 - 5788520
Alignment:
Q  102 cactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||  ||| ||| ||| | |||||||||| |||||  |||||||||||||||||| |||||||||||||||    
T  5788596 cactattcaattgacttactttaatcatacttttttactaatgtataaatacaaatattagtatgtaagatgttgtt 5788520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 41134701 - 41134631
Alignment:
Q  103 actattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||| ||| ||| ||||||||||     |||||||  ||||||||||||||||||||||||||||||||||    
T  41134701 actattcatttgacttactttgaccata-----taactaatgtataaatacaaatattagcatgtaagatgttgtt 41134631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 49110688 - 49110613
Alignment:
Q  103 actattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||| |||||||| |||||||||| ||||||||||| |||| ||||||||| |||  |||||| || |||||    
T  49110688 actattcaaatgatttactttgaccatattttttaactaatatattaatacaaatgttatgatgtaaaatattgtt 49110613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 21379817 - 21379863
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||    
T  21379817 tttttagctaatgtataaatacaaatattagcatgtaagatgttgtt 21379863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 38767259 - 38767201
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttc 179  Q
    |||||||||| ||||||||||| |||||||||||||| | || || |||||||||||||    
T  38767259 tttgaccatattttttaactaatatataaatacaaatgtcagtatataagatgttgttc 38767201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 45331915 - 45331992
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaac 139  Q
    |||||||||  |||||||| ||||   ||||||||||||||| || ||||||||||| ||| |||||||||| ||||||||    
T  45331915 tactccctccgtttcaaaacacat---gtatttttgcaatatgcattattcatatgacttactttgaccatattttttaac 45331992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 3851136 - 3851193
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||| |||||||||||||||  ||||||||||||||||| || ||||||| |||||    
T  3851136 tttgacaatactttttaactaatgtataaatacaaatattaacacgtaagatattgtt 3851193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 35570238 - 35570193
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgt 177  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||    
T  35570238 tttttaactaatatacaaatacaaattttagcatgtaagatgttgt 35570193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 34750550 - 34750618
Alignment:
Q  107 ttcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||| |||| ||| ||||||| |||||||||||||| ||| ||||| |||| ||| |||||||||||||    
T  34750550 ttcacatgacttactttgaccctactttttaactaatatacaaataaaaatgttaacatgtaagatgtt 34750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 42662248 - 42662284
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaat 157  Q
    |||||||||||||||||||||| ||||||||||||||    
T  42662248 tttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 47526025 - 47525973
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgttccattt 184  Q
    ||||||||||| |||||||||||||| ||||||| |||||| |||||| ||||    
T  47526025 tttttaactaatatataaatacaaatgttagcatttaagatcttgttcgattt 47525973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 37467503 - 37467456
Alignment:
Q  125 accatactttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    |||||| ||||||||||| |||||||||||||| ||||||| ||||||    
T  37467503 accatattttttaactaatatataaatacaaatgttagcatttaagat 37467456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 4048923 - 4048865
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttca 190  Q
    ||||||||||| ||||||||||||||  |||| |||||| |||||||  ||||||||||    
T  4048923 tttttaactaatatataaatacaaatgctagcttgtaagttgttgtttgatttatttca 4048865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 7380959 - 7380903
Alignment:
Q  144 atataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||||| ||||||  || ||||||||||||||||  |||||||||| |||||||||    
T  7380959 atataaagacaaatgataacatgtaagatgttgttggatttatttcaataaatattt 7380903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 19120719 - 19120679
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    ||||||| ||| ||||||||| |||||||||||||||||||    
T  19120719 tttttaattaatatataaatataaatattagcatgtaagat 19120679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 23707612 - 23707572
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    |||||||||||  ||||||||||||||||||||||| ||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgtgagat 23707572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 52 - 178
Target Start/End: Complemental strand, 38416919 - 38416793
Alignment:
Q  52 tgaaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaat 151  Q
    ||||| ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||    
T  38416919 tgaaaaatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaat 38416820  T
Q  152 acaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||||||||    
T  38416819 acaaatattagcatgtaagatgttgtt 38416793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 35381157 - 35381037
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  |||||| |||| | |||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  35381157 atactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaat 35381058  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  35381057 attagcatgtaagatgttgtt 35381037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 26169986 - 26170105
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||||||| ||||||||||||||||||||||  ||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaata 26170085  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  26170086 ttagcatgtaagatgttgtt 26170105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 55209836 - 55209717
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||||||| |||||||||||||||||||||| |||||||||||||||    
T  55209836 tactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaata 55209737  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  55209736 ttagcatgtaagatgttgtt 55209717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 36523219 - 36523090
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    |||||||||| || ||| ||||||||||||| ||||||| | |||| ||| |||||| ||||||||||||||| |||||||||||||| ||| |||||||    
T  36523219 tttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatgttaacatgtaa 36523120  T
Q  170 gatgttgttccatttatttcagtaaatatt 199  Q
    |||||||||| |||||||||  ||||||||    
T  36523119 gatgttgttcgatttatttcgataaatatt 36523090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 12625262 - 12625370
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   ||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12625262 tttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 12625361  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  12625362 gatgttgtt 12625370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 44232328 - 44232220
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44232328 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 44232229  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  44232228 gatgttgtt 44232220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 7614613 - 7614734
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    |||||||| ||  ||||||||||||| ||||| |||| ||||||| | || ||| |||| |||||||||||||| ||||||||||| |||||||||||||    
T  7614613 tatactccatccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaa 7614712  T
Q  157 tattagcatgtaagatgttgtt 178  Q
    | ||||||||||||||||||||    
T  7614713 tgttagcatgtaagatgttgtt 7614734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 25101717 - 25101826
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    ||||| |||||| |||||||||||||| | | ||||||||||| |  | |||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  25101717 atatattccctctatttcaaaatacatgttgcatttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattcaa 25101816  T
Q  156 atattagcat 165  Q
    ||||||||||    
T  25101817 atattagcat 25101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 38716885 - 38717005
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    |||||||||||  ||||||||||||| ||  ||||||||||| | ||||||| || ||| ||| ||||||||||||||||||||||  ||||||||||||    
T  38716885 tatactccctctgtttcaaaatacatgtccaatttttgcaatgtgcactattaat-tgacttactttgaccatactttttaactaatgtataaatacaaa 38716983  T
Q  157 tattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||    
T  38716984 tattagcatgtaagatgttgtt 38717005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 12240429 - 12240321
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  |||||| |||| | |||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12240429 tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 12240330  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  12240329 gatgttgtt 12240321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 25296831 - 25296723
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25296831 tttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 25296732  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  25296731 gatgttgtt 25296723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 29830343 - 29830462
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||  ||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 29830442  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  29830443 ttagcatgtaagatgttgtt 29830462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 31010214 - 31010333
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||| ||||||||||||| ||  ||||||| ||| | |||||||||| ||| ||| ||||||||||||||||||||||  |||||||| |||||    
T  31010214 tactccctcggtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaata 31010313  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    |||||||||||||| |||||    
T  31010314 ttagcatgtaagatattgtt 31010333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 54330952 - 54330833
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  |||| |||||||| ||  ||||||||||| | | |||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  54330952 tactccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaata 54330853  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  54330852 ttagcatgtaagatgttgtt 54330833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 2760989 - 2760873
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||| ||||||||||| |||||||||||||||    
T  2760989 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaata 2760890  T
Q  159 ttagcatgtaagatgtt 175  Q
    |||||||||||||||||    
T  2760889 ttagcatgtaagatgtt 2760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 38721336 - 38721480
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    |||||||||| |||| ||||||||| ||| |||||| |||| |  | |||||| |||| ||||||||| |||| |||||||| || ||||||||||||||    
T  38721336 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaat 38721435  T
Q  158 attagcatgtaagatgttgttccatttatttcagtaaatatttac 202  Q
     ||||||||||||||||||||| |||| ||||  ||| |||||||    
T  38721436 gttagcatgtaagatgttgttcaatttgtttcgataactatttac 38721480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 43967734 - 43967842
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   ||||||||||| | ||||||| |  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43967734 tttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 43967833  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  43967834 gatgttgtt 43967842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 17610280 - 17610399
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||| ||||||||| ||  ||||||||||||| |||||||||  ||| ||| |||||||||| |||||| ||||  ||||||||||||||    
T  17610280 tactccctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaata 17610379  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  17610380 ttagcatgtaagatgttgtt 17610399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 35686373 - 35686492
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  | | ||| ||||||||||||||||||||||  ||||||||||||||    
T  35686373 tactccctcagtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaata 35686472  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||| ||||||||||||||||    
T  35686473 ttatcatgtaagatgttgtt 35686492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 178
Target Start/End: Complemental strand, 47386552 - 47386429
Alignment:
Q  55 aatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaataca 154  Q
    |||||||||||||  ||||||||||||| ||   |||||| ||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||    
T  47386552 aatatactccctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaataca 47386453  T
Q  155 aatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||||    
T  47386452 aatattagcatgtaagatgttgtt 47386429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 27755730 - 27755853
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaac----atataaatacaaatattagcat 165  Q
    ||||||||||||| ||| ||||||| ||| |||| | ||||||| | |||||||||||||||||||||||||||    |||||||||||||| ||||||     
T  27755730 tttcaaaatacatgtcgcatttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatatatataaatacaaatgttagcac 27755829  T
Q  166 gtaagatgttgttccatttatttc 189  Q
    |||||||||||||| |||| ||||    
T  27755830 gtaagatgttgttcaatttgtttc 27755853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 39307707 - 39307815
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||| ||||||||||||||| ||||||| |||| ||| |||||   |||||||||||||| |||||||||||||| |||| ||||||    
T  39307707 tttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatgttagtatgtaa 39307806  T
Q  170 gatgttgtt 178  Q
     ||||||||    
T  39307807 aatgttgtt 39307815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 50205754 - 50205862
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||   |||||| ||| | |||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  50205754 tttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagctcgtaa 50205853  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  50205854 gatgttgtt 50205862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 3036991 - 3037090
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||||| || | |||| |  |||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3036991 tttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 3037090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 5428589 - 5428720
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||| ||||| ||||| | ||||||||| |||| |||  ||||||||||||||||||||||  ||||||| ||||  || |||||||    
T  5428589 tttcaaaatacatgtcgcattttggcaatgtgcactattcacatgacttacgttgaccatactttttaactaac--ataaatataaatgctatcatgtaa 5428686  T
Q  170 gatgttgttccatttatttcagtaaatatttaca 203  Q
    ||||||||||||||| ||||  ||||| ||||||    
T  5428687 gatgttgttccatttgtttcgataaatgtttaca 5428720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 27407881 - 27407760
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    ||||||||| ||||||||||||||  || ||||||||| | |  |||||||| || | ||| ||||||| |||||||||||||| |||||||||||||||    
T  27407881 tactccctccatttcaaaatacatgacgcatttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaaata 27407782  T
Q  159 ttagca--tgtaagatgttgtt 178  Q
    ||||||  ||||||||||||||    
T  27407781 ttagcatgtgtaagatgttgtt 27407760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 45291862 - 45291951
Alignment:
Q  89 tttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||| |||| | |||||||||  ||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgtt 45291951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 25918218 - 25918322
Alignment:
Q  74 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatg 173  Q
    ||||||||| ||  ||||||||||| | |||||||||  ||| ||||||||||| ||||||||||| ||  |||||||| ||||||||||||||||||||    
T  25918218 aaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcatgtaagatg 25918317  T
Q  174 ttgtt 178  Q
    |||||    
T  25918318 ttgtt 25918322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 2571133 - 2571031
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||  ||| | || |||||| ||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||    
T  2571133 tttcaaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaa 2571034  T
Q  170 gat 172  Q
    |||    
T  2571033 gat 2571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 26125737 - 26125827
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||| |||||| || ||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  26125737 atttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 26125827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 17446892 - 17446776
Alignment:
Q  62 tccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatta 161  Q
    |||||| |||| |||||| || ||  |||||| |||| | |||||||||| ||| | | ||||||||||| ||||||||||  |||||||||||||||||    
T  17446892 tccctccattttaaaatatatgtccaatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatatta 17446793  T
Q  162 gcatgtaagatgttgtt 178  Q
     ||||||||||||||||    
T  17446792 acatgtaagatgttgtt 17446776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 55800863 - 55800941
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatg 166  Q
    ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  55800863 atttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 56297948 - 56297846
Alignment:
Q  75 aaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgt 174  Q
    |||||||| |||||||||| |||| |||| |||||| || | || ||||||||||| || |||||||| |||||||||||||| ||||||| ||| ||||    
T  56297948 aaatacatgtcgtatttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgt 56297849  T
Q  175 tgt 177  Q
    |||    
T  56297848 tgt 56297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 4467719 - 4467662
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4467719 tttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 4467662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 200
Target Start/End: Original strand, 19595734 - 19595846
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatt 187  Q
    |||||| |||||| |||||||||  ||| ||| ||| |||||||| |||||||||  ||||||||||||||||||||||||| || |||||  |||| ||    
T  19595734 atttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgtttgatttgtt 19595833  T
Q  188 tcagtaaatattt 200  Q
    |||  ||||||||    
T  19595834 tcaaaaaatattt 19595846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 20875498 - 20875390
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| | ||| ||||  ||| | |||||||||||| ||||| |||||||||| ||||||||||| ||||||||  |||| || |||| |||    
T  20875498 tttcaaaatacatgttgtaattttaaaatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatgtttgcatataa 20875399  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  20875398 gatgttgtt 20875390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 50620915 - 50620828
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    ||||| ||||||| |||||||||  | | ||| ||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||    
T  50620915 attttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcatgtaagatgtt 50620828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 19433624 - 19433501
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccata----ctttttaactaacatataaataca 154  Q
    |||||||||  ||||||||||||| |   ||||||||||| | |||| ||||  ||| ||| ||||||||||    |||||||||||   ||||||||||    
T  19433624 tactccctctgtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaataca 19433525  T
Q  155 aatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||||    
T  19433524 aatattagcatgtaagatgttgtt 19433501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 55191853 - 55191943
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||| | |||||||||| ||| ||| |||||| ||||||||||| |||  | |||||||||||||||||||| || ||||||||    
T  55191853 atttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagcatgcaaaatgttgtt 55191943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 9029649 - 9029592
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||    
T  9029649 tttgaccatactttttaactaatgtataaatacaaatattagcacgtaagatattgtt 9029592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 14144657 - 14144600
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  14144657 tttgaccacattttttaactaatatataaatacaaatattagtatgtaagatgttgtt 14144600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 23360188 - 23360291
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 168  Q
    |||||||||||||| ||| ||||||||||||| ||||||||  |||| ||| ||||||| || ||||||||||| |||| ||||||||| || ||| |||    
T  23360188 atttcaaaatacatgtcgcatttttgcaatatgcactattc--atgacttactttgacc-tattttttaactaatatatgaatacaaatgttggcaagta 23360284  T
Q  169 agatgtt 175  Q
     ||||||    
T  23360285 tgatgtt 23360291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 19903865 - 19903771
Alignment:
Q  106 attcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||| || ||||| ||||||||||  |||||||||| |||||||||||||| ||||||||| |||| |||||  |||| ||||  |||||||||    
T  19903865 attcacataatttactttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgtttgatttgtttcgataaatattt 19903771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 6013218 - 6013154
Alignment:
Q  119 attttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccattt 184  Q
    |||||||||||| |||||||||||||||||||||  ||||| |||||||||||| |||||| ||||    
T  6013218 attttgaccatattttttaactaacatataaata-taatatgagcatgtaagattttgttcgattt 6013154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 29051715 - 29051793
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaag 170  Q
    |||| ||||||||| |||||| || | ||| |||||||||| ||||||||||| ||||||||||||  |||||||||||||    
T  29051715 ttttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaa--attagcatgtaag 29051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 34316536 - 34316636
Alignment:
Q  74 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatg 173  Q
    |||||| || |||||||||| || | | ||||||| |||||| ||| ||||| |||| || |||||||| |||||||||||||| ||||||| |||||||    
T  34316536 aaaatatatgtcgtatttttacagtgtgcactatttatatgacttactttgatcata-ttgttaactaatatataaatacaaatgttagcatataagatg 34316634  T
Q  174 tt 175  Q
    ||    
T  34316635 tt 34316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 50181128 - 50181201
Alignment:
Q  127 catactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    |||| ||||||| |||  |||||||||||||||||||||||||||| |||||| |||| | ||| |||||||||    
T  50181128 catattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctcaataaatattt 50181201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 10550455 - 10550542
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttt--taactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||| |||||| ||||||||| ||| |||| ||| |||||| ||||  ||||||| ||||||||| |||| |||||||||||||||||    
T  10550455 ttttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaaaatgttagcatgtaagatgtt 10550542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 34652193 - 34652159
Alignment:
Q  144 atataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||||||||||||||||    
T  34652193 atataaatacaaatattagcatgtaagatgttgtt 34652159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 34652298 - 34652208
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatt 160  Q
    ||||||||||||| ||  ||||||| ||| |  |||||| | | || ||| || ||||||| |||||||||||||||||||||||||||||    
T  34652298 tttcaaaatacatgtcacatttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 37767223 - 37767101
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 155  Q
    ||||||||||||  ||| |||||  || ||| | ||||| ||||| ||||||| |  ||| ||| |||||| ||||||||||||  | ||||||||||||    
T  37767223 atatactccctccgttttaaaatgaatgtcgcaattttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaa 37767124  T
Q  156 atattagcatgtaagatgttgtt 178  Q
    || |||| ||||||||| |||||    
T  37767123 atgttagaatgtaagatattgtt 37767101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 5472181 - 5472088
Alignment:
Q  91 tttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccattt 184  Q
    ||||||||||  | |||||| || ||||| |||||||| |||||||||  || |||||||||||||| |||| ||||| ||| |||||| ||||    
T  5472181 tttgcaatatgtattattcacataatttaatttgaccacactttttaatcaatatataaatacaaatgttagtatgtatgattttgttcgattt 5472088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 176
Target Start/End: Original strand, 54610855 - 54610980
Alignment:
Q  52 tgaaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacact-attcatatgatttattttgaccatactttttaactaacatataaa 150  Q
    |||||||||||| |||  |||||||||| || |   ||||||||||| |||||| |||||  ||| ||| ||| | |||| ||||||| |||  ||||||    
T  54610855 tgaaatatactctctccgtttcaaaatatatgtttaatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaa 54610954  T
Q  151 tacaaatattagcatgtaagatgttg 176  Q
    |||| ||||||| |||||||||||||    
T  54610955 tacagatattagtatgtaagatgttg 54610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 29586069 - 29585966
Alignment:
Q  96 aatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaa 195  Q
    ||||||||||||||| || | ||| |||||| ||| ||||||| ||| || ||||||||||| ||| ||||||| ||||| ||  |||||| ||| ||||    
T  29586069 aatatacactattcacataacttactttgac-atattttttaattaatatgtaaatacaaatgttaacatgtaaaatgttttttgatttatctcaataaa 29585971  T
Q  196 tattt 200  Q
    |||||    
T  29585970 tattt 29585966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 30446309 - 30446416
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||| ||| ||| || |||| ||| | || |||||| |||| ||| ||||||| || ||||| ||||| |||||||||||||| ||||| |||||    
T  30446309 tttcaaaatgcatgtcgcatgtttgtaatctgcattattcacatgacttactttgacccta-tttttgactaatatataaatacaaatgttagcctgtaa 30446407  T
Q  170 gatgttgtt 178  Q
     ||||||||    
T  30446408 aatgttgtt 30446416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 55091381 - 55091330
Alignment:
Q  127 catactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| ||||||| ||| |||||||||||||| |||| |||||||||||||||    
T  55091381 catattttttaattaatatataaatacaaatgttagtatgtaagatgttgtt 55091330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 56080025 - 56080108
Alignment:
Q  102 cactattcatatgatttattttgaccatactttttaactaacatataaatac-aaatattagcatgtaagatgttgttccattt 184  Q
    ||||||||  || ||||| |||||| ||| ||||||||||| ||||| |||| |||| ||| ||| ||||||||||||||||||    
T  56080025 cactattcgcataatttactttgactatattttttaactaatatatacatacaaaatgttatcatataagatgttgttccattt 56080108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 27344137 - 27344091
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||| ||||||||| |||||||| ||| ||||||||||||    
T  27344137 tttttaactaatatataaataaaaatattaacatataagatgttgtt 27344091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 51456543 - 51456506
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  51456543 tttttaactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 8435768 - 8435720
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaa 138  Q
    ||||||||| || | ||||||||| ||||||||||| ||||||||||||    
T  8435768 ttttgcaatgtatattattcatattatttattttgatcatactttttaa 8435720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 32871590 - 32871502
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||| ||||| | |||||||  ||| || |||||| |||| ||||||||||| || ||||||||||| | || ||||| |||||||||    
T  32871590 ttttgtaatatgctctattcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgtt 32871502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 16865054 - 16865179
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    ||||| ||| |||| ||||||||| ||| |||||| ||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||     
T  16865054 tactcactctattttaaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatg 16865153  T
Q  159 ttagcatgtaagatgttgttccattt 184  Q
    |||||||||||| |||||||| ||||    
T  16865154 ttagcatgtaagttgttgttcgattt 16865179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 19141329 - 19141209
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  19141329 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 19141230  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  19141229 attagcatgtaagatgttgtt 19141209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 8042284 - 8042165
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 8042185  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  8042184 ttagcatgtaagatgttgtt 8042165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 5404998 - 5405115
Alignment:
Q  61 ctccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatt 160  Q
    |||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  5404998 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 5405097  T
Q  161 agcatgtaagatgttgtt 178  Q
    ||||||||||||||||||    
T  5405098 agcatgtaagatgttgtt 5405115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 7608060 - 7608168
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7608060 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 7608159  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  7608160 gatgttgtt 7608168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 7799858 - 7799966
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||| ||||||||||| | ||||||||| |||| ||| ||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  7799858 tttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatgttagcatgtaa 7799957  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  7799958 gatgttgtt 7799966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 44365168 - 44365276
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||||| |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  44365168 tttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 44365267  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  44365268 gatgttgtt 44365276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 11841841 - 11841736
Alignment:
Q  73 caaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    |||||||||| ||  ||||||||||| | |||||||||| ||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11841841 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 11841742  T
Q  173 gttgtt 178  Q
    ||||||    
T  11841741 gttgtt 11841736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 39358145 - 39358262
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  39358145 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 39358244  T
Q  158 attagcatgtaagatgtt 175  Q
    ||||||||||||||||||    
T  39358245 attagcatgtaagatgtt 39358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 2183220 - 2183103
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||| |||||||||    
T  2183220 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaat 2183121  T
Q  158 attagcatgtaagatgtt 175  Q
    ||||||||||||||||||    
T  2183120 attagcatgtaagatgtt 2183103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 24093789 - 24093673
Alignment:
Q  69 atttcaaaatacatttcgtattttt-gcaatatacactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaatattagcatg 166  Q
    |||||||||||||| |||||||||| || || | | |||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  24093789 atttcaaaatacatgtcgtattttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatataa-tacaaatgttagcatg 24093691  T
Q  167 taagatgttgttccattt 184  Q
    ||||||||||||| ||||    
T  24093690 taagatgttgttcgattt 24093673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 6223077 - 6223185
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  6223077 tttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 6223176  T
Q  170 gatgttgtt 178  Q
    |||| ||||    
T  6223177 gatgatgtt 6223185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 11931702 - 11931810
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||| | |||| |||||| || ||||||||| | ||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||    
T  11931702 tttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcatttaa 11931801  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  11931802 gatgttgtt 11931810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 36072184 - 36072290
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 168  Q
    |||||||||||||| ||  |||||| |||||| |||||||||| ||| ||| ||||| |||| |||||||||||  |||||||| |||||||||||||||    
T  36072184 atttcaaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagcatgta 36072283  T
Q  169 agatgtt 175  Q
    |||||||    
T  36072284 agatgtt 36072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 42133751 - 42133868
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    |||||||||  |||||||||||||| ||||| ||||  ||| | ||||||||||||  |||| ||||| |||| ||||||||||| ||||||||||||||    
T  42133751 atactcccttcatttcaaaatacatgtcgtaattttaaaatgtgcactattcatatagtttactttgatcatattttttaactaatatataaatacaaat 42133850  T
Q  158 attagcatgtaagatgtt 175  Q
     |||||||| ||||||||    
T  42133851 gttagcatgaaagatgtt 42133868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 19262691 - 19262793
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  |||||| |||| | ||||||| || | | ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  19262691 tttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 19262790  T
Q  170 gat 172  Q
    |||    
T  19262791 gat 19262793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 24251971 - 24252078
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||||||  | |||| ||||||  | |||||| || | |||||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  24251971 tttcaaaatacatttcacaattttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaatacaaatgttagcatgtaa 24252070  T
Q  170 gatgttgtt 178  Q
     ||||||||    
T  24252071 -atgttgtt 24252078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 43444792 - 43444689
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 168  Q
    |||||||||||||| ||| | |||| |||| | || |||||| || ||||  |||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  43444792 atttcaaaatacatgtcgcaattttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgta 43444693  T
Q  169 agat 172  Q
    ||||    
T  43444692 agat 43444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 44644932 - 44644989
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||    
T  44644932 tttgaccatactttttaactaatatataaatataaatattaacatataagatgttgtt 44644989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 36177815 - 36177723
Alignment:
Q  84 tcgtatttttgcaatatacactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    ||||| |||||||||   || |||||| ||||||||||||||||||| ||||| |||||| ||||||||| |||||||| ||| |||||||||    
T  36177815 tcgtaattttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaatattaacatctaagatgtt 36177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 33607387 - 33607491
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  |||||| |||| | |||||||||| ||| ||| |||||  |||||||||||||||  |||||||||||||||    ||||||    
T  33607387 tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaatat----atgtaa 33607482  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  33607483 gatgttgtt 33607491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 38839136 - 38839191
Alignment:
Q  122 ttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgt 177  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgt 38839191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 9172346 - 9172289
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||| |||||||||||  ||||||||||||  ||||||||||||||||||||    
T  9172346 tttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgtt 9172289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 22839191 - 22839070
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    |||||||| || ||||||||||| ||||   |  |||||||| | ||||||||| || | ||| |||||||||| ||||||||||  ||||||||  |||    
T  22839191 tatactccttccatttcaaaatatattttacaaatttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaa 22839092  T
Q  157 tattagcatgtaagatgttgtt 178  Q
    | ||||||| ||||||||||||    
T  22839091 tgttagcatataagatgttgtt 22839070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 32774653 - 32774710
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||| ||||| ||| ||||||||  |||||||||||||||    
T  32774653 tttgaccatactttttaactaatatatacatataaatattaatatgtaagatgttgtt 32774710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 38292014 - 38292071
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||| ||||||||||  |||||||||||||| ||| ||||||||||||||||    
T  38292014 tttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgtt 38292071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 9007047 - 9006939
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||| || |||||||||||||| ||| | |||| |||| | || ||||||| |   ||| |||||||||| |||||||||||  |||||||||||||    
T  9007047 atactccatccatttcaaaatacatgtcgcaattttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaat 9006948  T
Q  158 attagcatg 166  Q
     ||||||||    
T  9006947 gttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 31610872 - 31610796
Alignment:
Q  102 cactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||| || | ||||||| |||||  ||||||||||| |||||||||||||| |||| |||||||| ||||||    
T  31610872 cactattcacataacttatttttaccattttttttaactaatatataaatacaaatgttagaatgtaagacgttgtt 31610796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 3013884 - 3013817
Alignment:
Q  133 ttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    |||||||||| ||||||||||||||  ||||||| ||| |||||||| |||||| ||| |||||||||    
T  3013884 ttttaactaatatataaatacaaatgctagcatgcaagttgttgttcgatttatctcaataaatattt 3013817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 7666136 - 7666231
Alignment:
Q  105 tattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||||||| ||||| ||||||||||  ||||| |||| |||||||||||| | || | ||||||||| || ||| |||||| ||| |||||||||    
T  7666136 tattcatataatttactttgaccatatattttatctaatatataaatacaattgttggtatgtaagatattattcaatttatatcaataaatattt 7666231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 13117524 - 13117461
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccattt 184  Q
    |||||||||| ||||||||| | ||||||||| ||||||||| || ||||||||||||| ||||    
T  13117524 tttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgttcgattt 13117461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 13125367 - 13125288
Alignment:
Q  99 atacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| |||||||  ||| ||| ||| |||||| |||||||||||  ||||||||||||||||||||| |||||| |||||    
T  13125367 atactctattcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgtt 13125288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 36719565 - 36719467
Alignment:
Q  75 aaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgt 174  Q
    |||||||| ||  |||||||||| |  |||||||||  ||| ||| |||||||||||||||||| ||     ||||||||||||||||||| ||||||||    
T  36719565 aaatacatgtccaatttttgcaacaagcactattcacttgacttactttgaccatactttttaagta-----taaatacaaatattagcatttaagatgt 36719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 201
Target Start/End: Complemental strand, 9553979 - 9553841
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||| |||| |||||||||||||| ||| |||||| |||| |||| |||    || | ||| |||||||  | ||||||||||| |||||||| |||||    
T  9553979 atacttcctcaatttcaaaatacatgtcgcatttttacaatgtacattat----ataacttactttgaccgcattttttaactaatatataaat-caaat 9553885  T
Q  158 attagcatgtaagatgttgttccatttatttcagtaaatattta 201  Q
    |||| ||||||| ||||||||| |||| | ||  ||||||||||    
T  9553884 attaacatgtaaaatgttgttcgatttgtctcgataaatattta 9553841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 141
Target Start/End: Original strand, 13598484 - 13598523
Alignment:
Q  102 cactattcatatgatttattttgaccatactttttaacta 141  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  13598484 cactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 19165999 - 19165904
Alignment:
Q  105 tattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    |||||| |||| || |||||| |||  ||||||| ||| |||||||||||| | ||| ||||||||||||||||  |||| ||||  |||||||||    
T  19165999 tattcacatgacttgttttgatcatggtttttaattaatatataaatacaattgttatcatgtaagatgttgtttaatttgtttcgataaatattt 19165904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 31904078 - 31904027
Alignment:
Q  123 tgaccatactttttaactaacatataaatacaaatattagcatgtaagatgt 174  Q
    |||||||| ||||||||||| ||||||||| |||||||| || |||||||||    
T  31904078 tgaccatattttttaactaatatataaatataaatattatcacgtaagatgt 31904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 3837325 - 3837271
Alignment:
Q  115 atttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||| ||| || ||||||||||| ||||||||| |||||| |||||||||    
T  3837325 atttattttaaccgtattttttaactaatatataaatataaatatcagcatgtaa 3837271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 4835728 - 4835772
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttg 176  Q
    ||||||||||| |||||||||||||| ||| ||| ||||||||||    
T  4835728 tttttaactaatatataaatacaaatgttaacatataagatgttg 4835772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 616782 - 616902
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  616782 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 616881  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  616882 attagcatgtaagatgttgtt 616902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 623175 - 623295
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  623175 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 623274  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  623275 attagcatgtaagatgttgtt 623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 42587511 - 42587391
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  42587511 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 42587412  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  42587411 attagcatgtaagatgttgtt 42587391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 40494395 - 40494503
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40494395 tttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 40494494  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  40494495 gatgttgtt 40494503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 41263810 - 41263929
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    ||||| ||| |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||    
T  41263810 tactctctccatttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 41263909  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  41263910 ttagcatgtaagatgttgtt 41263929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 3100746 - 3100640
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | ||||||| |  ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  3100746 tttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 3100647  T
Q  170 gatgttg 176  Q
    |||||||    
T  3100646 gatgttg 3100640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 13216988 - 13216864
Alignment:
Q  54 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac 153  Q
    ||||||||||| |  |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||     
T  13216988 aaatatactccttacatttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatat 13216889  T
Q  154 aaatattagcatgtaagatgttgtt 178  Q
    ||||||||||||| |||||||||||    
T  13216888 aaatattagcatgaaagatgttgtt 13216864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 14237291 - 14237399
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  14237291 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaa 14237390  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  14237391 gatgttgtt 14237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 18044436 - 18044544
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  18044436 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaa 18044535  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  18044536 gatgttgtt 18044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 32998461 - 32998569
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  32998461 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaa 32998560  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  32998561 gatgttgtt 32998569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 38957181 - 38957289
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    |||||||||| || ||  ||||||||||| | ||||||| |  ||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  38957181 tttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcatgtaa 38957280  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  38957281 gatgttgtt 38957289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 2766299 - 2766191
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | ||||||| |  ||| ||| ||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  2766299 tttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgtaa 2766200  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  2766199 gatgttgtt 2766191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 36642121 - 36642001
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccat-actttttaactaacatataaatacaaat 157  Q
    |||||||||  ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| ||||||||| ||||||||||| | ||||||||||||||    
T  36642121 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaat 36642022  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  36642021 attagcatgtaagatgttgtt 36642001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 35403527 - 35403635
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  |||  || ||||||||||||||||||||||  |||||||||| |||||| |||||||    
T  35403527 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaatacagatattaacatgtaa 35403626  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  35403627 gatgttgtt 35403635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 132017 - 132136
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||   |||||||||  | |||||||||  ||| ||| ||||| |||| |||||||||||  ||||||||||||||    
T  132017 tactccctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaata 132116  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  132117 ttagcatgtaagatgttgtt 132136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 5173282 - 5173367
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    ||||||||| |  ||||||||||||||||| ||||| |||| | ||||||||| |||||||||||||||||| |||||||||||||    
T  5173282 ttttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatgtaagatgtt 5173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 5878317 - 5878429
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  |||| |||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtcc-atttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 5878415  T
Q  159 ttagcatgtaagat 172  Q
    ||||||||||||||    
T  5878416 ttagcatgtaagat 5878429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 8394346 - 8394465
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||| | |||||||||||  ||||| ||||||||    
T  8394346 tactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaata 8394445  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    |||| || ||||||||||||    
T  8394446 ttagtatttaagatgttgtt 8394465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 11637811 - 11637901
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||| |||| | |||||||||  ||| ||||||||||| |||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  11637811 atttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgtaagatgttgtt 11637901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 6414198 - 6414102
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccattt 184  Q
    ||||||||||| | ||||||||| |||| ||| |||||||||||||||||| ||| |||||||| |||| ||| | |||||| ||||||||| ||||    
T  6414198 atttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaagattggtatgtaaaatgttgttcgattt 6414102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 4270339 - 4270236
Alignment:
Q  74 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatg 173  Q
    ||||||||| ||  ||||||| ||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||||| ||||||| |||    
T  4270339 aaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaacatgtaatatg 4270240  T
Q  174 ttgt 177  Q
    ||||    
T  4270239 ttgt 4270236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 22489507 - 22489416
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattag-catgtaagatgttgtt 178  Q
    ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||||||  ||| |||||||||||    
T  22489507 atttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtaatgcaagatgttgtt 22489416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 18090348 - 18090453
Alignment:
Q  78 tacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgt 177  Q
    ||||| ||| |||||| |||| | ||||||| |||||| |||||| || |||| ||||||||||| ||||||||| |||| ||||||| |||||||||||    
T  18090348 tacatgtcgaattttttcaatgtgcactatttatatgacttattt-gatcatattttttaactaatatataaatataaatgttagcatataagatgttgt 18090446  T
Q  178 tccattt 184  Q
    || ||||    
T  18090447 tcgattt 18090453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 9632166 - 9632274
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||| | |||| |||| |  |||||||| ||  ||||||||   |||| ||||| |||||||||||||||| ||| |||||||||||    
T  9632166 tttcaaaatacatgtcgcaattttacaatgtgtactattcacatagtttattttagtcatattttttcactaacatataaatactaatgttagcatgtaa 9632265  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  9632266 gatgttgtt 9632274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 18035163 - 18035219
Alignment:
Q  122 ttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  18035163 ttgaccataatttttaactaatatataaatgcaaatgttagcatgtaagatgttgtt 18035219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 40716712 - 40716644
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||  |||| | ||| |||||||||    
T  40716712 tttttaactaatatataaatacaaattttagcatgtaagatgttgtttgatttgtctcaataaatattt 40716644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 8182030 - 8181935
Alignment:
Q  105 tattcatatgatttattttgaccatactttttaactaac-atataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatatt 199  Q
    ||||||||| ||||| | ||| |||| ||||||| |||  ||||||||||||||||||  |||||||||||||||| |||| ||||| ||||||||    
T  8182030 tattcatataatttactatgatcatattttttaattaattatataaatacaaatattacaatgtaagatgttgttcaatttgtttcaataaatatt 8181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 40204984 - 40204865
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    ||||||||| ||||| |||||||| ||||| ||||  ||| | ||||||||||   | ||| ||||| |||| ||||| ||||| ||||||||||||||     
T  40204984 tactccctctatttctaaatacatgtcgtaattttaaaatgtgcactattcatccaacttactttgaacatattttttgactaatatataaatacaaatg 40204885  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    |||||| ||||| |||||||    
T  40204884 ttagcaggtaagttgttgtt 40204865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 24729908 - 24729974
Alignment:
Q  112 atgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||| |||| |||| |||||| |||| | || |||||||||||||||||||||||||    
T  24729908 atgatttattttgatcataattttgaactaatatatgagtataaatattagcatgtaagatgttgtt 24729974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 33700273 - 33700216
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||| ||||||||||| |||||||||||||| |||| | |||||||||||||    
T  33700273 tttgaccatattttttaactaatatataaatacaaatgttagtaagtaagatgttgtt 33700216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 38497142 - 38497191
Alignment:
Q  129 tactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  38497142 tactttttaactaatgtataaatacaaatattagcatggaagatgttgtt 38497191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 3370503 - 3370399
Alignment:
Q  74 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatg 173  Q
    ||||||||||| |  |||||||||| |  ||| |||| |||| ||| |||||||||| ||||||| ||| |||||||||||||| |||  |||||||||     
T  3370503 aaaatacattttgcttttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagata 3370404  T
Q  174 ttgtt 178  Q
    |||||    
T  3370403 ttgtt 3370399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 24524131 - 24524202
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatta 161  Q
    ||||||||| | ||||||| |  ||| ||| ||||||||||||||||||||||  |||||||||||||||||    
T  24524131 ttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 32855639 - 32855583
Alignment:
Q  144 atataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    |||||||||||||| ||||||||||||||||||||  |||| | ||| |||||||||    
T  32855639 atataaatacaaatgttagcatgtaagatgttgtttgatttgtctcaataaatattt 32855583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 36167074 - 36167182
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    |||||||||||  ||| ||||||||| |   ||||||||||| |  ||||||||  ||| ||| |||||  ||||||||| |||||  ||||||||||||    
T  36167074 tatactccctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaa 36167173  T
Q  157 tattagcat 165  Q
    |||||||||    
T  36167174 tattagcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 13217288 - 13217232
Alignment:
Q  54 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattca 110  Q
    ||||||||||| ||  ||||||||||||| ||  ||||||||||| |||||||||||    
T  13217288 aaatatactccttccgtttcaaaatacatgtccaatttttgcaatgtacactattca 13217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 17214047 - 17213927
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    |||||||||| |||||||||||||| ||  ||||||||||| | |||||||||| ||| ||| |||||| |||||||||||||||  |||||||||||||    
T  17214047 atactccctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaat 17213948  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  17213947 attagcatgtaagatgttgtt 17213927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 19088222 - 19088101
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    |||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||| ||||||||||||| |||||||||||||    
T  19088222 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaa 19088123  T
Q  157 tattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||    
T  19088122 tattagcatgtaagatgttgtt 19088101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 22054783 - 22054891
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||||| |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22054783 tttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 22054882  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  22054883 gatgttgtt 22054891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 32414942 - 32414822
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  32414942 atactccctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 32414843  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  32414842 attagcatgtaagatgttgtt 32414822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 24624203 - 24624084
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  24624203 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 24624104  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  24624103 ttagcatgtaagatgttgtt 24624084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 4147930 - 4148050
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  4147930 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 4148029  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  4148030 attagcatgtaagatgttgtt 4148050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 29790201 - 29790325
Alignment:
Q  54 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac 153  Q
    ||||||||||| ||  ||||||||||||| ||| | ||||||||| || |||||||| |||| ||| || ||||||| ||||||||||| ||||||||||    
T  29790201 aaatatactccatctgtttcaaaatacatgtcgcaattttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatac 29790300  T
Q  154 aaatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||| |||||||    
T  29790301 aaatattagcatgtaagttgttgtt 29790325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 4440861 - 4440992
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    |||||||||| || | | ||||||| ||| | |||||||||||| | ||| |||||||||||||||||  |||||||||||||||||| |||||||||||    
T  4440861 tttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgttagcatgtaa 4440960  T
Q  170 gatgttgttccatttatttcagtaaatattta 201  Q
    |||||||||| |||| ||||  ||||||||||    
T  4440961 gatgttgttcgatttgtttcgataaatattta 4440992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 6563226 - 6563345
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| |   ||||||||||| | ||||||| |  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  6563226 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaata 6563325  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  6563326 ttagcatgtaagatgttgtt 6563345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 55 - 178
Target Start/End: Complemental strand, 18668954 - 18668831
Alignment:
Q  55 aatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaataca 154  Q
    |||||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||  |||||||||| |||||||||||  ||||||||||    
T  18668954 aatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaataca 18668855  T
Q  155 aatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||||    
T  18668854 aatattagcatgtaagatgttgtt 18668831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 17155160 - 17155293
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |||| |||||  ||| | ||||||||| ||||  || ||||| |||||||  |||||||||||||||||||||| |||||||||||    
T  17155160 tttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgtaa 17155259  T
Q  170 gatgttgttccatttatttcagtaaatatttaca 203  Q
    |||||||||| |||| |||||  |||||||||||    
T  17155260 gatgttgttcaatttgtttcaaaaaatatttaca 17155293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 15383181 - 15383073
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | || ||||||| ||| ||| ||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  15383181 tttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcatgtaa 15383082  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  15383081 gatgttgtt 15383073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 20226549 - 20226441
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   ||||||||||| | |||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  20226549 tttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 20226450  T
Q  170 gatgttgtt 178  Q
    || ||||||    
T  20226449 gacgttgtt 20226441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 22120533 - 22120425
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   ||||||||||| | |||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22120533 tttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 22120434  T
Q  170 gatgttgtt 178  Q
    || ||||||    
T  22120433 gacgttgtt 22120425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 1040854 - 1040943
Alignment:
Q  89 tttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||| | |||||||||  ||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgtt 1040943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 15337499 - 15337607
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||||||  | |||| |||||| || |||||| || | ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  15337499 tttcaaaatacatttcacaattttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 15337598  T
Q  170 gatgttgtt 178  Q
     ||||||||    
T  15337599 aatgttgtt 15337607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 17257902 - 17257794
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  || ||||||||||||||||||||||    
T  17257902 tttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaatattagcatgtaa 17257803  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  17257802 gatgttgtt 17257794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 32671815 - 32671935
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  | | ||| |||||||||| |||||||||||  |||||||||||||    
T  32671815 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaat 32671914  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||| ||||||||||||||    
T  32671915 attagcgtgtaagatgttgtt 32671935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 28477763 - 28477872
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 168  Q
    |||||||||||||| ||  | ||||||||| |  |||||||| |||| ||  |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  28477763 atttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgta 28477862  T
Q  169 agatgttgtt 178  Q
    || |||||||    
T  28477863 agttgttgtt 28477872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 3623940 - 3623856
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||| ||||||||| |||||||||  |||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  3623940 ttttacaatatacattattcatatagtttactttgaccata-tttttaactaatatataaatacaaatgttagcatgtaagatgtt 3623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 3989511 - 3989407
Alignment:
Q  73 caaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    |||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  | ||||||||| ||||||||||||||||    
T  3989511 caaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcatgtaagat 3989413  T
Q  173 gttgtt 178  Q
    ||||||    
T  3989412 gttgtt 3989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 31869719 - 31869824
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |||   |||| |||| ||||||||||  || ||||| |||||||||  ||||||||||| |||||||||||||| |||||||||||    
T  31869719 tttcaaaatacatgtcgcgattttacaatgtacactattcccataatttactttgaccattttttttaactaatatataaatacaaatgttagcatgtaa 31869818  T
Q  170 gatgtt 175  Q
    ||||||    
T  31869819 gatgtt 31869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 29693893 - 29694000
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 168  Q
    |||||||||||||| ||  | ||||||||| |  |||||||| |||| ||  |||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  29693893 atttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgta 29693992  T
Q  169 agatgttg 176  Q
    || |||||    
T  29693993 agttgttg 29694000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 19240823 - 19240741
Alignment:
Q  90 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    ||||||||| || |||||||| || | |||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaagat 19240741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 24955629 - 24955539
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||| ||| | || ||||||  ||| ||||||||| |||| |||||||||||   |||||||||||||||||||||||||||||||||    
T  24955629 atttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgtaagatgttgtt 24955539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 12226033 - 12226094
Alignment:
Q  117 ttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  12226033 ttattttgatcatactttttaactaatgtataaatataaatattagcatgtaagatattgtt 12226094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 2360034 - 2360109
Alignment:
Q  103 actattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||| |||| ||||| |||||| ||| ||||||||||| ||||||||| |||| ||||||||||| ||||||||    
T  2360034 actatttatataatttactttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgtt 2360109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 25476070 - 25475956
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||| ||||||||||||||  ||||||||     |    
T  25476070 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata-----a 25475976  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  25475975 ttagcatgtaagatgttgtt 25475956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 5495306 - 5495368
Alignment:
Q  116 tttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||| |||  ||||||||||| |||||||||||||| |||||||||||||| |||||    
T  5495306 tttattttgatcatgttttttaactaatatataaatacaaatgttagcatgtaagattttgtt 5495368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 21540881 - 21540775
Alignment:
Q  69 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 168  Q
    |||||||||||||| |   |||||| |||| | |||||||||| ||| ||| ||||||||||||||| |||||   |||||||||||||||||  |||||    
T  21540881 atttcaaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatattataatgta 21540782  T
Q  169 agatgtt 175  Q
    | |||||    
T  21540781 aaatgtt 21540775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 31569277 - 31569175
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| |||||| ||||||||| | |||  |||||||||||||||||| ||||||    
T  31569277 tttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatgtaa 31569178  T
Q  170 gat 172  Q
    |||    
T  31569177 gat 31569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 23158109 - 23158052
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||| | ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  23158109 tttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatgttgtt 23158052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 8101664 - 8101716
Alignment:
Q  123 tgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||||||| ||||||||||| |||||||||||||| ||| |||||||||||||    
T  8101664 tgaccatattttttaactaatatataaatacaaatgttaacatgtaagatgtt 8101716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 20437260 - 20437156
Alignment:
Q  75 aaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaatattagcatgtaagatg 173  Q
    |||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||| |||| ||||| ||||||  ||||||||||||||| | |||||||||||    
T  20437260 aaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaatatcaacatgtaagatg 20437161  T
Q  174 ttgtt 178  Q
    |||||    
T  20437160 ttgtt 20437156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 10298773 - 10298719
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||||    
T  10298773 tttgaccatattttttcactaatatataaatacaaatgttagcatgtaaaatgtt 10298719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 1260492 - 1260548
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgt 177  Q
    |||||||||| ||||||||||| |||||||||||| | |||||| ||||||| ||||    
T  1260492 tttgaccatattttttaactaatatataaatacaattgttagcacgtaagattttgt 1260548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 10520479 - 10520587
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   ||||||||||| |  | ||||||| ||| ||| ||||||||||| | ||||||||  |||||||||| ||||||  ||||||    
T  10520479 tttcaaaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaatacagatattaatatgtaa 10520578  T
Q  170 gatgttgtt 178  Q
     ||||||||    
T  10520579 aatgttgtt 10520587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 28556737 - 28556798
Alignment:
Q  125 accatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttat 186  Q
    |||||||||||||| ||| ||||| |||||||  ||| |||||||||||||| || ||||||    
T  28556737 accatactttttaattaaaatatacatacaaaatttatcatgtaagatgttgctcaatttat 28556798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 16193053 - 16193025
Alignment:
Q  150 atacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||||||||||    
T  16193053 atacaaatattagcatgtaagatgttgtt 16193025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 26567333 - 26567265
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||||||||| ||||||||| ||||  |||||||||| | ||||||| |||||| |||  ||||||||    
T  26567333 tttttaactaatatataaatataaatggtagcatgtaaaacgttgttcaatttatctcaacaaatattt 26567265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 21797567 - 21797675
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  21797567 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 21797666  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  21797667 gatgttgtt 21797675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 42490459 - 42490339
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  42490459 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 42490360  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  42490359 attagcatgtaagatgttgtt 42490339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 13499597 - 13499478
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  13499597 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 13499498  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  13499497 ttagcatgtaagatgttgtt 13499478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 44561795 - 44561928
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| | | || |||||||| | ||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| ||  |||||||    
T  44561795 tttcaaaatacatgttgcatgtttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatgttgacatgtaa 44561894  T
Q  170 gatgttgttccatttatttcagtaaatatttaca 203  Q
    |||||||||| |||| ||||  ||||||||||||    
T  44561895 gatgttgttcgatttgtttcgataaatatttaca 44561928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 27010737 - 27010617
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||| ||||||||||||| ||||||||||||||    
T  27010737 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaat 27010638  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  27010637 attagcatgtaagatgttgtt 27010617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 39866404 - 39866284
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||| ||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  39866404 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 39866305  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  39866304 attagcatgtaagatgttgtt 39866284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 42761745 - 42761626
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  42761745 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 42761646  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  42761645 ttagcatgtaagatgttgtt 42761626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 27334982 - 27334874
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27334982 tttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 27334883  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  27334882 gatgttgtt 27334874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 33415798 - 33415918
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |  |||| || ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  33415798 atactccctctgtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaat 33415897  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  33415898 attagcatgtaagatgttgtt 33415918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 30213842 - 30213923
Alignment:
Q  97 atatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| |||||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30213842 atatgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtt 30213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 20765195 - 20765315
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||| ||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||| ||||||||||||||| ||||||||||||||    
T  20765195 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 20765294  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||| ||||||||||||||||    
T  20765295 attaacatgtaagatgttgtt 20765315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 54507652 - 54507760
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||||| |||||||||  ||| |||||||||  |||||||||||||||  |||||||||| ||||||||||||||    
T  54507652 tttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagatattagcatgtaa 54507751  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  54507752 gatgttgtt 54507760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 38137854 - 38137943
Alignment:
Q  89 tttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||| | ||||||||   |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  38137854 tttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 38137943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 21005289 - 21005412
Alignment:
Q  55 aatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaataca 154  Q
    |||||||||||||  ||||||||||||| |   ||||||||||  | |||||||||  | | ||| |||||||||||||||||| ||| ||||||||| |    
T  21005289 aatatactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatata 21005388  T
Q  155 aatattagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||||||    
T  21005389 aatattagcatgtaagatgttgtt 21005412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 34912393 - 34912286
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||||||  |||||    
T  34912393 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagattgtaa 34912294  T
Q  170 gatgttgt 177  Q
    ||||||||    
T  34912293 gatgttgt 34912286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 33803526 - 33803641
Alignment:
Q  64 cctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatac-tttttaactaacatataaatacaaatattag 162  Q
    |||| |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||| |||||||||||  |||||||| |||||||||    
T  33803526 cctctatttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattag 33803625  T
Q  163 catgtaagatgttgtt 178  Q
    | ||||||||||||||    
T  33803626 cttgtaagatgttgtt 33803641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 52167255 - 52167328
Alignment:
Q  105 tattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||    
T  52167255 tattcatatgacttcttttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgtt 52167328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 6910345 - 6910453
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  | |||| |||| |||||||||||  ||| ||| ||| |||||| |||||||||||  ||||||||||||||||| |||||||    
T  6910345 tttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatgtaa 6910444  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  6910445 gatgttgtt 6910453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 44856415 - 44856490
Alignment:
Q  128 atactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatatttaca 203  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||| ||||  ||||||||||||    
T  44856415 atactttttaactaacatataaatacaaatgttagtatgtaagatgttgttcgttttgtttcgataaatatttaca 44856490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 48334782 - 48334664
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||| ||||||||| ||||| |||| |||| |||| |||||| ||  |||| ||| |||||  ||||||||||  |||||||||||||||    
T  48334782 tactccctccgttttaaaatacatctcgtaattttacaatgtacattattcacatagtttactttaaccattttttttaactat-atataaatacaaata 48334684  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  48334683 ttagcatgtaagatgttgtt 48334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 36227574 - 36227664
Alignment:
Q  88 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||||   |||||||||| ||| ||| |||||||||| |||| || |||  ||||||||||||||||||||||||||||||||||    
T  36227574 atttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaatattagcatgtaagatgttgtt 36227664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 19823900 - 19824013
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||      |||||    
T  19823900 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtat------aaata 19823993  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||||||||||||||||    
T  19823994 ttagcatgtaagatgttgtt 19824013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 15333006 - 15332949
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||| | ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  15333006 tttgaccaaattttttaactaatatataaatacaaatgttagcatgtaagatgttgtt 15332949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 41253014 - 41252909
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    |||||||||| || ||| | |||| |||| | ||||||||||||   ||| ||| |||||| ||||||||||| |||||||||||||| ||||||| |||    
T  41253014 tttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgttagcatataa 41252915  T
Q  170 gatgtt 175  Q
    ||||||    
T  41252914 gatgtt 41252909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 43181575 - 43181498
Alignment:
Q  102 cactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||||||||  ||||||| |||||||||||||||| ||||||  |||||||| ||||||||| |||||||||||||||    
T  43181575 cactattcacttgatttactttgaccatacttttttaactaatgtataaatataaatattagtatgtaagatgttgtt 43181498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 43467993 - 43467885
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    |||||||||||||  |  ||||||||||| |  ||||||||  ||| ||| |||||||||||||||||||| |  ||||||| | |||||||||| ||||    
T  43467993 tttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaatattagcaggtaa 43467894  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  43467893 gatgttgtt 43467885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 25527450 - 25527520
Alignment:
Q  105 tattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||||| |||| ||| || ||||||| ||||||||| | |||||||||||||||||| |||||||||||||    
T  25527450 tattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaacatgtaagatgtt 25527520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 3430493 - 3430420
Alignment:
Q  102 cactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    ||||||| |||| | ||| |||||||||| ||||||||||| |||| |||| |||||||||||||||| |||||    
T  3430493 cactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgtaaaatgtt 3430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 33128123 - 33128063
Alignment:
Q  117 ttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgt 177  Q
    ||||||||| |||||||||||||||| | ||||||| |||||||| |||||||||| ||||    
T  33128123 ttattttgatcatactttttaactaatacataaatataaatattaacatgtaagatattgt 33128063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 20410098 - 20410201
Alignment:
Q  79 acatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| ||| ||||||||||||| || ||||||||||||||||||| ||| ||  ||||||| || ||||| |||||||| |||   ||||||||||||||    
T  20410098 acatgtcgcatttttgcaatatgca-tattcatatgatttatttttaccgtatattttaac-aatatatagatacaaatgttaatttgtaagatgttgtt 20410195  T
Q  179 ccattt 184  Q
    | ||||    
T  20410196 cgattt 20410201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 41751610 - 41751553
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||| || |||||||||    
T  41751610 tttgatcatattttttaactaatatataaatacaaatgttagcatttacgatgttgtt 41751553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 19327594 - 19327474
Alignment:
Q  57 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 156  Q
    ||||||||||| ||| |||||||| | ||||| | |  |||||| ||||||||| || | ||| ||  |||||| ||||||||||| | ||| |||||||    
T  19327594 tatactccctccattccaaaatacgtgtcgtagtgtgacaatatgcactattcacataacttacttaaaccatattttttaactaatagatagatacaaa 19327495  T
Q  157 tattagcatgtaagatgttgt 177  Q
    | |||| || |||||||||||    
T  19327494 tgttaggatctaagatgttgt 19327474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 23940576 - 23940508
Alignment:
Q  107 ttcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    ||||||| |||||  |||||| || ||||||||||| ||||||||| |||| ||| |||||||||||||    
T  23940576 ttcatataatttacattgaccttattttttaactaatatataaataaaaatgttaacatgtaagatgtt 23940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 37766044 - 37766168
Alignment:
Q  56 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttatt-----ttgaccatactttttaactaacatataaa 150  Q
    ||||||||| || |||||||||||||  ||  || |||||||| | ||||||| | |||||||| |     |||||  ||||||||||||||||||| ||    
T  37766044 atatactccatccatttcaaaatacacgtctcatatttgcaatgtgcactattaacatgatttactataatttgactgtactttttaactaacatatgaa 37766143  T
Q  151 tacaaatattagcatgtaagatgtt 175  Q
    ||||| ||||||| | |||||||||    
T  37766144 tacaagtattagcctctaagatgtt 37766168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 17643795 - 17643850
Alignment:
Q  123 tgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| ||| ||||||||||| || ||||||||||| |||||||||||||| |||||    
T  17643795 tgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatattgtt 17643850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 27813492 - 27813445
Alignment:
Q  117 ttattttgaccatactttttaactaacatataaatacaaatattagca 164  Q
    |||||||||| ||| ||||||||||| |||||||||||||| ||||||    
T  27813492 ttattttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 3017852 - 3017902
Alignment:
Q  120 ttttgaccatactttttaactaacatataaatacaaatattagcatgtaag 170  Q
    ||||||||||| ||||||||||  |||||||||||||| ||||||| ||||    
T  3017852 ttttgaccatattttttaactattatataaatacaaatgttagcatataag 3017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 15568140 - 15568078
Alignment:
Q  116 tttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    |||| ||||| |||| ||||||||||| |||||||||||||| ||| | |||||||| |||||    
T  15568140 tttaatttgatcatattttttaactaatatataaatacaaatgttaccgtgtaagatattgtt 15568078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 55264713 - 55264659
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||| ||||| ||||||| |||||| || |||||||||||| |||||||||||||    
T  55264713 tttgtccatattttttaattaacatgtagatacaaatattaacatgtaagatgtt 55264659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 23224363 - 23224306
Alignment:
Q  115 atttattttgaccatacttttt-aactaacatataaatacaaatattagcatgtaaga 171  Q
    ||||| |||||| ||||||||| |||||| |||||||| |||||||||| ||||||||    
T  23224363 atttactttgactatacttttttaactaatatataaatgcaaatattagaatgtaaga 23224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 70961 - 71079
Alignment:
Q  59 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 158  Q
    ||||||||| |||||||||||||| ||  ||||||||||||| |||||||||  ||| |||||||||||||| |||||||||||  ||||||||||||||    
T  70961 tactccctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaata 71059  T
Q  159 ttagcatgtaagatgttgtt 178  Q
    ||||||| ||||||||||||    
T  71060 ttagcatttaagatgttgtt 71079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 68020 - 67912
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||||||||||| ||  ||||||| ||| | |||||||||| ||| ||| ||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  68020 tttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaa 67921  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  67920 gatgttgtt 67912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 162100 - 161980
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||||||||||||| ||  ||||||| ||| | |||||||||  ||| |||  |||||||||||||||||||||  |||||||||||||    
T  162100 atactccctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaat 162001  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  162000 attagcatgtaagatgttgtt 161980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 178
Target Start/End: Complemental strand, 100913 - 100790
Alignment:
Q  55 aatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaataca 154  Q
    |||||||||||||  ||||||||||||| |   | ||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||    
T  100913 aatatactccctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaataca 100814  T
Q  155 aatattagcatgtaagatgttgtt 178  Q
    ||||||||| ||||||||||||||    
T  100813 aatattagcgtgtaagatgttgtt 100790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 13980 - 13860
Alignment:
Q  58 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 157  Q
    ||||||||||  ||| ||||||||| ||  || |||| ||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||| ||||    
T  13980 atactccctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaat 13881  T
Q  158 attagcatgtaagatgttgtt 178  Q
    |||||||||||||||||||||    
T  13880 attagcatgtaagatgttgtt 13860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 22791 - 22899
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||| ||||||||||  | |||| |||||| || |||||| || | |||||||||||| | ||||||||| | |||||||||||||| |||||||||||    
T  22791 tttcataatacatttcacaattttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatgttagcatgtaa 22890  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  22891 gatgttgtt 22899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 9084 - 8976
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||| ||||||||||  | |||| |||||| || |||||| || | ||| |||||||| | ||||||||||| |||||||||||||| |||||||||||    
T  9084 tttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaa 8985  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  8984 gatgttgtt 8976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 138281 - 138173
Alignment:
Q  70 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 169  Q
    ||||| ||||||||||  | |||| |||||| || |||||| || | ||| |||||||| | ||||||||||| |||||||||||||| |||||||||||    
T  138281 tttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaa 138182  T
Q  170 gatgttgtt 178  Q
    |||||||||    
T  138181 gatgttgtt 138173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 4010 - 4061
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 172  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  4010 tttgaccatattttttaactaatatataaatacaaatgttagcatgtaagat 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 28852 - 28798
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgtt 175  Q
    |||||||||| |||||||||||  ||||||||||||||||||||| |||||||||    
T  28852 tttgaccatattttttaactaatttataaatacaaatattagcatataagatgtt 28798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 1588 - 1661
Alignment:
Q  127 catactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    |||| ||||||| |||  |||||||||||||||||||||||||||| |||||| |||| | ||| |||||||||    
T  1588 catattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctcaataaatattt 1661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 53620 - 53541
Alignment:
Q  121 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatgttgttccatttatttcagtaaatattt 200  Q
    ||||| |||| ||||||||||| |||||| ||||||| |||||||| |||||||||||  |||| ||||  |||||||||    
T  53620 tttgatcatattttttaactaatatataattacaaattttagcatgcaagatgttgtttgatttgtttcgataaatattt 53541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 217064 - 217018
Alignment:
Q  132 tttttaactaacatataaatacaaatattagcatgtaagatgttgtt 178  Q
    ||||||| ||| |||||||||||||| ||||||| ||||||||||||    
T  217064 tttttaagtaatatataaatacaaatgttagcatataagatgttgtt 217018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University