View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3237_high_47 (Length: 391)

Name: NF3237_high_47
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3237_high_47
NF3237_high_47
[»] chr4 (26 HSPs)
chr4 (11-377)||(40006353-40006719)
chr4 (117-242)||(43853645-43853770)
chr4 (116-275)||(36161876-36162039)
chr4 (180-274)||(48257477-48257575)
chr4 (180-239)||(29966531-29966590)
chr4 (195-242)||(44947614-44947661)
chr4 (180-274)||(19853357-19853455)
chr4 (205-276)||(2069451-2069525)
chr4 (195-239)||(22301055-22301099)
chr4 (195-239)||(34024278-34024322)
chr4 (195-242)||(11299870-11299917)
chr4 (204-292)||(33921202-33921294)
chr4 (124-239)||(42032318-42032433)
chr4 (195-242)||(45227881-45227928)
chr4 (116-166)||(44596926-44596976)
chr4 (195-274)||(56040506-56040589)
chr4 (189-242)||(17949178-17949231)
chr4 (189-242)||(17953030-17953083)
chr4 (180-274)||(26633516-26633614)
chr4 (195-239)||(4644063-4644107)
chr4 (195-239)||(9528717-9528761)
chr4 (195-239)||(9645364-9645408)
chr4 (195-239)||(25274088-25274132)
chr4 (195-239)||(35261397-35261441)
chr4 (195-239)||(53616490-53616534)
chr4 (195-239)||(56199301-56199345)
[»] chr8 (32 HSPs)
chr8 (140-242)||(36033588-36033690)
chr8 (180-275)||(27110308-27110407)
chr8 (188-239)||(16794491-16794542)
chr8 (188-274)||(23230791-23230881)
chr8 (195-239)||(37565719-37565763)
chr8 (195-271)||(15344459-15344539)
chr8 (195-271)||(15433524-15433604)
chr8 (195-271)||(15524828-15524908)
chr8 (188-239)||(33299054-33299105)
chr8 (188-239)||(33896286-33896337)
chr8 (180-239)||(34612004-34612063)
chr8 (186-274)||(37971431-37971523)
chr8 (195-242)||(43135419-43135466)
chr8 (196-239)||(43192188-43192231)
chr8 (119-273)||(5046902-5047057)
chr8 (197-239)||(13575947-13575989)
chr8 (197-239)||(17019434-17019476)
chr8 (197-239)||(17549871-17549913)
chr8 (116-162)||(21238040-21238086)
chr8 (116-162)||(29617065-29617111)
chr8 (195-274)||(31013466-31013549)
chr8 (116-162)||(40618863-40618909)
chr8 (197-242)||(12243954-12243999)
chr8 (195-275)||(24099114-24099192)
chr8 (134-275)||(26468947-26469088)
chr8 (195-239)||(2656070-2656114)
chr8 (195-239)||(3240567-3240611)
chr8 (195-239)||(4809164-4809208)
chr8 (195-239)||(9619197-9619241)
chr8 (195-239)||(29777419-29777463)
chr8 (195-239)||(39152982-39153026)
chr8 (195-239)||(44099776-44099820)
[»] chr2 (35 HSPs)
chr2 (183-292)||(31128634-31128742)
chr2 (188-242)||(6174010-6174064)
chr2 (188-239)||(4228320-4228371)
chr2 (176-239)||(7558649-7558712)
chr2 (188-239)||(30420866-30420917)
chr2 (175-242)||(37613946-37614013)
chr2 (195-274)||(12554042-12554125)
chr2 (176-238)||(28037283-28037345)
chr2 (189-292)||(34128539-34128646)
chr2 (180-274)||(33585581-33585679)
chr2 (121-275)||(41694776-41694933)
chr2 (195-239)||(9986182-9986226)
chr2 (195-239)||(27248991-27249035)
chr2 (195-239)||(40659772-40659816)
chr2 (195-275)||(4904006-4904090)
chr2 (195-242)||(17319514-17319561)
chr2 (188-239)||(32913437-32913488)
chr2 (116-166)||(4779010-4779060)
chr2 (247-289)||(8885559-8885601)
chr2 (195-274)||(11985094-11985177)
chr2 (144-242)||(14423521-14423619)
chr2 (196-275)||(14955684-14955767)
chr2 (180-275)||(28533800-28533899)
chr2 (116-166)||(37876399-37876449)
chr2 (116-162)||(37994544-37994590)
chr2 (180-274)||(1421832-1421929)
chr2 (116-169)||(4903938-4903991)
chr2 (194-239)||(8971467-8971512)
chr2 (195-239)||(84021-84065)
chr2 (195-239)||(8806063-8806107)
chr2 (195-239)||(17994587-17994631)
chr2 (133-270)||(18107549-18107690)
chr2 (187-239)||(27477345-27477397)
chr2 (195-239)||(34600411-34600455)
chr2 (195-239)||(36234195-36234239)
[»] chr6 (25 HSPs)
chr6 (180-281)||(30608360-30608465)
chr6 (195-239)||(12059613-12059657)
chr6 (196-273)||(20225999-20226080)
chr6 (196-273)||(22119983-22120064)
chr6 (195-239)||(25064429-25064473)
chr6 (175-238)||(1450573-1450636)
chr6 (188-239)||(8196240-8196291)
chr6 (144-235)||(17346343-17346434)
chr6 (211-275)||(30879594-30879662)
chr6 (240-275)||(32802692-32802727)
chr6 (195-274)||(67861-67944)
chr6 (195-274)||(9341511-9341594)
chr6 (188-275)||(9380169-9380260)
chr6 (116-162)||(31297071-31297117)
chr6 (116-166)||(33052960-33053010)
chr6 (195-274)||(33053028-33053111)
chr6 (195-239)||(8027958-8028002)
chr6 (195-239)||(8497161-8497205)
chr6 (199-239)||(12653137-12653177)
chr6 (195-239)||(17237126-17237170)
chr6 (195-239)||(17334946-17334990)
chr6 (195-239)||(23947157-23947201)
chr6 (195-276)||(31296965-31297050)
chr6 (195-274)||(32327080-32327160)
chr6 (195-239)||(35001783-35001827)
[»] chr3 (21 HSPs)
chr3 (196-275)||(53508370-53508449)
chr3 (188-242)||(25631359-25631413)
chr3 (145-199)||(43564491-43564545)
chr3 (188-274)||(48650587-48650677)
chr3 (195-239)||(50194195-50194239)
chr3 (195-271)||(628783-628863)
chr3 (196-239)||(30648560-30648603)
chr3 (203-274)||(40487470-40487545)
chr3 (116-166)||(47896397-47896447)
chr3 (195-274)||(52922977-52923060)
chr3 (195-240)||(2342637-2342682)
chr3 (196-274)||(4711627-4711709)
chr3 (188-274)||(12050501-12050591)
chr3 (116-164)||(628716-628764)
chr3 (195-239)||(3848759-3848803)
chr3 (195-239)||(14464700-14464744)
chr3 (195-239)||(25162626-25162670)
chr3 (195-239)||(32607659-32607703)
chr3 (195-239)||(36906312-36906356)
chr3 (195-239)||(44907239-44907283)
chr3 (195-239)||(46934829-46934873)
[»] chr1 (31 HSPs)
chr1 (195-274)||(31919138-31919221)
chr1 (195-275)||(15431526-15431610)
chr1 (188-239)||(48217634-48217685)
chr1 (216-275)||(6217704-6217767)
chr1 (180-292)||(799677-799791)
chr1 (180-239)||(13144657-13144716)
chr1 (180-239)||(38520360-38520419)
chr1 (195-242)||(51868485-51868532)
chr1 (195-239)||(5701456-5701500)
chr1 (195-239)||(11454134-11454178)
chr1 (135-275)||(14489420-14489563)
chr1 (180-239)||(27456672-27456731)
chr1 (195-238)||(35584462-35584505)
chr1 (226-292)||(48809110-48809179)
chr1 (195-274)||(14872788-14872871)
chr1 (196-271)||(19061061-19061140)
chr1 (188-271)||(24583298-24583385)
chr1 (180-274)||(35461899-35461992)
chr1 (116-162)||(47133156-47133202)
chr1 (196-274)||(5983985-5984067)
chr1 (197-242)||(13969378-13969423)
chr1 (197-242)||(15312357-15312402)
chr1 (195-239)||(7342919-7342963)
chr1 (195-239)||(9172687-9172731)
chr1 (195-239)||(9180669-9180713)
chr1 (195-239)||(9687045-9687089)
chr1 (196-240)||(39927396-39927440)
chr1 (195-239)||(45805669-45805713)
chr1 (195-239)||(47133091-47133135)
chr1 (195-239)||(50165939-50165983)
chr1 (195-239)||(51872060-51872104)
[»] chr5 (25 HSPs)
chr5 (188-274)||(11976788-11976878)
chr5 (195-275)||(26877969-26878052)
chr5 (195-274)||(34945538-34945621)
chr5 (188-239)||(43148922-43148973)
chr5 (144-242)||(9425275-9425372)
chr5 (195-294)||(13422058-13422161)
chr5 (195-274)||(38597942-38598025)
chr5 (195-239)||(3271242-3271286)
chr5 (116-164)||(8984781-8984829)
chr5 (195-281)||(11875525-11875608)
chr5 (150-281)||(8514469-8514602)
chr5 (196-292)||(14082257-14082357)
chr5 (196-239)||(31391614-31391657)
chr5 (195-274)||(9113585-9113668)
chr5 (116-166)||(13007475-13007525)
chr5 (180-274)||(14726306-14726404)
chr5 (194-239)||(28235782-28235827)
chr5 (195-239)||(7241979-7242023)
chr5 (195-239)||(7247154-7247198)
chr5 (195-239)||(8772021-8772065)
chr5 (195-239)||(8984845-8984889)
chr5 (195-239)||(16981487-16981531)
chr5 (195-239)||(30299039-30299083)
chr5 (195-239)||(41184280-41184324)
chr5 (195-239)||(43008155-43008199)
[»] chr7 (21 HSPs)
chr7 (187-242)||(32521761-32521816)
chr7 (116-275)||(4999810-4999973)
chr7 (195-274)||(40993305-40993388)
chr7 (116-162)||(41553228-41553274)
chr7 (208-274)||(13796802-13796872)
chr7 (195-239)||(433531-433575)
chr7 (188-239)||(19404610-19404661)
chr7 (195-274)||(8001406-8001489)
chr7 (116-166)||(11654060-11654110)
chr7 (195-274)||(34899467-34899550)
chr7 (195-274)||(48061570-48061653)
chr7 (188-221)||(22927703-22927736)
chr7 (195-240)||(24351177-24351222)
chr7 (124-273)||(31481887-31482041)
chr7 (195-239)||(42311473-42311515)
chr7 (196-274)||(48316673-48316755)
chr7 (195-239)||(7640615-7640659)
chr7 (196-236)||(17222841-17222881)
chr7 (118-166)||(28407712-28407760)
chr7 (195-239)||(45198873-45198917)
chr7 (195-239)||(46822208-46822252)
[»] scaffold0050 (1 HSPs)
scaffold0050 (188-274)||(65895-65985)
[»] scaffold0219 (1 HSPs)
scaffold0219 (180-239)||(14716-14775)
[»] scaffold0150 (1 HSPs)
scaffold0150 (197-239)||(10067-10109)
[»] scaffold0262 (1 HSPs)
scaffold0262 (240-292)||(1728-1780)
[»] scaffold0022 (1 HSPs)
scaffold0022 (195-239)||(83276-83320)


Alignment Details
Target: chr4 (Bit Score: 280; Significance: 1e-157; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 11 - 377
Target Start/End: Original strand, 40006353 - 40006719
Alignment:
Q  11 atgaagattagattggttaagtggtttgggagagagatgtgaggacagtcaacttaaaccttactgacgctggggattgtttgtgtggggggagagnnnn 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        
T  40006353 atgaagattagattggttaagtggtttgggagagagatgtgaggacagtcaacttaaaccttactgacgcaggggattgtttgtgtggggggagagtatt 40006452  T
Q  111 nnnnnacaaaaacaaaactataatcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttg 210  Q
         ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||||||||| ||    
T  40006453 ttttgacaaaaacaaaacgataatcatttattcaaattaatagaatatatcaaatataatcacatatttaacatcattaaaaatataaaggatgaatctg 40006552  T
Q  211 cgaacaaactcgaaacatccaagttaataacaacgataaaatacctataaataatatgataaaatagaagtaattgaaatacacgtacatccagttctcc 310  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||| |||||||| |||||||    
T  40006553 cgaacaaactcgaaacatccaagttaataacaacgataaaatgcctataaataaaatgataaaataaaaataattgaaatacatgtacatccggttctcc 40006652  T
Q  311 acaattacatgacacatgtatattcaatcacatttcaccacttagataactgtttagatgttttatg 377  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40006653 acgattacatgacacatgtatattcaatcacatttcaccacttagataactgtttagatgttttatg 40006719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 43853770 - 43853645
Alignment:
Q  117 caaaaacaaaactataatcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaaca 216  Q
    |||||| ||||| ||| ||||| ||||||||| ||||||||||||| ||| ||  ||||| | ||||||  ||||| |||||| | | ||| ||||||||    
T  43853770 caaaaataaaacgatattcattcattcaaattgatagaatacatcagatacaataacatactcaacatcgctaaaaatgtaaatggttaatctgcgaaca 43853671  T
Q  217 aactcgaaacatccaagttaataaca 242  Q
    |||||  |||||||||||||||||||    
T  43853670 aactcacaacatccaagttaataaca 43853645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 275
Target Start/End: Complemental strand, 36162039 - 36161876
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaac 215  Q
    ||||||| ||||  ||| ||||| ||||||||| ||||||||||||||||| ||  ||||  | |||||| ||||||  ||||||  ||||| || ||||    
T  36162039 acaaaaataaaatgatattcattcattcaaattgatagaatacatcaaatacaataacatgatcaacatcgttaaaaacgtaaagagtgaatctgtgaac 36161940  T
Q  216 aaactcgaaacatccaagttaataac----aacgataaaatacctataaataatatgataaaat 275  Q
    ||||||  |||| |||||||||||||    |||||  |||| |||| |||||||||||||||||    
T  36161939 aaactcacaacacccaagttaataacatataacgaccaaatgcctacaaataatatgataaaat 36161876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 48257477 - 48257575
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    |||||| ||||||  ||||||| ||||| |||||||||||||  || |||||||||||||    ||||||  |||||||||| ||||||||||||||||    
T  48257477 aacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaaaatccaagttaatagcatacaacggcaaaatacctacaaataatatgataaaa 48257575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 29966590 - 29966531
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| ||||||  ||||||||||||| |||||||||||||  ||||||||||||||||    
T  29966590 aacatcgttaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 29966531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 44947661 - 44947614
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||    
T  44947661 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaataaca 44947614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 19853357 - 19853455
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    |||||| ||||||  ||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  19853357 aacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctagaaataatatgataaaa 19853455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 276
Target Start/End: Original strand, 2069451 - 2069525
Alignment:
Q  205 aatttgcgaacaaactcgaaacatccaagttaataac---aacgataaaatacctataaataatatgataaaata 276  Q
    ||||||||||||| ||| || ||||||||||||||||   |||| |||||| | || ||||||||||||||||||    
T  2069451 aatttgcgaacaatctcaaagcatccaagttaataacataaacggtaaaatgcatacaaataatatgataaaata 2069525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 22301099 - 22301055
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  22301099 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 22301055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 34024278 - 34024322
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  34024278 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 34024322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 11299870 - 11299917
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||||||||||| |||||||||||||  |||| ||||||||||||||    
T  11299870 gtaaaggatgaatctgcgaacaaactcacaacacccaagttaataaca 11299917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 33921294 - 33921202
Alignment:
Q  204 gaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaatagaagtaattgaaatac 292  Q
    |||| |||||||||||||  ||||||||||||||||    ||||| ||| ||| |||| |||||||||||||||||  |||| | ||||||||    
T  33921294 gaatatgcgaacaaactcacaacatccaagttaatagcatacaactatacaatgcctacaaataatatgataaaatctaagtcactgaaatac 33921202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 42032318 - 42032433
Alignment:
Q  124 aaaactataatcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcga 223  Q
    ||||| ||| ||||| ||||||||| ||||||||||||| || |||  ||||| | |||||| ||||||   ||||||   ||||||| |||||||||      
T  42032318 aaaacgatattcattcattcaaattgatagaatacatcatatgtaataacataatcaacatcgttaaaaacataaaggtgaaatttgcaaacaaactcac 42032417  T
Q  224 aacatccaagttaata 239  Q
    ||||| ||||||||||    
T  42032418 aacattcaagttaata 42032433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 45227881 - 45227928
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||||||||||| | |||||||||||  |||||||||||||||||||    
T  45227881 gtaaaggatgaatctacgaacaaactcacaacatccaagttaataaca 45227928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 44596976 - 44596926
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaata 166  Q
    ||||||||||||| ||| ||||| ||||||||| ||||| |||||||||||    
T  44596976 acaaaaacaaaacaatattcattaattcaaattgatagagtacatcaaata 44596926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 56040506 - 56040589
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| ||||| |||||||  | ||||||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  56040506 gtaaagggtgaatctgcgagcaaactcacagcatccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaa 56040589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 17949178 - 17949231
Alignment:
Q  189 aaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    |||| |||||||| ||||| |||||||||||||  |||| ||||||||||||||    
T  17949178 aaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataaca 17949231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 17953030 - 17953083
Alignment:
Q  189 aaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    |||| |||||||| ||||| |||||||||||||  |||| ||||||||||||||    
T  17953030 aaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataaca 17953083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 26633516 - 26633614
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| |||||  ||||||| ||||| |||||||||||||  |||||| ||| |||||    |||||| |||||| ||||||  |||||||||||||    
T  26633516 aacatcactaaaaacgtaaagggtgaatctgcgaacaaactcacaacatctaagctaatagcatacaacggtaaaatgcctatatttaatatgataaaa 26633614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4644107 - 4644063
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| ||||||||| |||  ||||||||||||||||    
T  4644107 gtaaaggatgaatctgcgaacaagctcacaacatccaagttaata 4644063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9528717 - 9528761
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||| ||||||||||    
T  9528717 gtaaaggatgaatctgcgaacaaactcacaacattcaagttaata 9528761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9645364 - 9645408
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  9645364 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 9645408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 25274132 - 25274088
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  |||||| |||||||||    
T  25274132 gtaaaggatgaatctgcgaacaaactcacaacatctaagttaata 25274088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 35261441 - 35261397
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| ||| |||||||||  ||||||||||||||||    
T  35261441 gtaaaggatgaatctgcaaacaaactcacaacatccaagttaata 35261397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 53616490 - 53616534
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  53616490 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaata 53616534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 56199345 - 56199301
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  56199345 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 56199301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 36033690 - 36033588
Alignment:
Q  140 attcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||| ||||||| ||||||||||| ||||||||||| |||||| ||||| | ||||| ||| ||| |||||||||||||  ||||||||||||||||    
T  36033690 attcaaactaatagagtacatcaaatacaaccacatattcaacatcgttaaattcgtaaaagataaatctgcgaacaaactcataacatccaagttaata 36033591  T
Q  240 aca 242  Q
    |||    
T  36033590 aca 36033588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 27110308 - 27110407
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
    ||||||| ||||| || ||| ||||||| |||||||||||||  |||| |||||||||||    |||||||||||||  ||| |||||||||||||||||    
T  27110308 aacatcactaaaaatgcaaaagatgaatatgcgaacaaactcacaacacccaagttaatagcatacaacgataaaatgtctacaaataatatgataaaat 27110407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 16794542 - 16794491
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  16794542 taaaatagtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 16794491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 23230881 - 23230791
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||| |||||| | ||||| |||||||||||||  |||| |||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  23230881 taaaagtgtaaatggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaa 23230791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 37565719 - 37565763
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||||||||||||||||  | ||||||||||||||    
T  37565719 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaata 37565763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 15344539 - 15344459
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgata 271  Q
    ||||||||||||| |||||||||||||  | || |||||||||||    ||||||| ||||| |||| |||||||||||||    
T  15344539 gtaaaggatgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgata 15344459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 15433604 - 15433524
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgata 271  Q
    ||||||||||||| |||||||||||||  | || |||||||||||    ||||||| ||||| |||| |||||||||||||    
T  15433604 gtaaaggatgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgata 15433524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 15524908 - 15524828
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgata 271  Q
    ||||||||||||| |||||||||||||  | || |||||||||||    ||||||| ||||| |||| |||||||||||||    
T  15524908 gtaaaggatgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgata 15524828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 33299105 - 33299054
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||| ||||||| |||||||||||||  |||||| |||||||||    
T  33299105 taaaattgtaaatgatgaatctgcgaacaaactcacaacatctaagttaata 33299054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 33896337 - 33896286
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| |||||||||||||| |||||| ||||||  ||||||||||||||||    
T  33896337 taaaaatgtaaaggatgaatctgcgaaaaaactcacaacatccaagttaata 33896286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 34612063 - 34612004
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||| |||||  |||||| |||||| |||||||||||||  ||||||||||||||||    
T  34612063 aacatcactaaaaacgtaaagaatgaatctgcgaacaaactcacaacatccaagttaata 34612004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 37971523 - 37971431
Alignment:
Q  186 attaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| |||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||  ||||| |||| ||||||| ||||||||    
T  37971523 attaaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatgtgataaaa 37971431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 43135419 - 43135466
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||| |||||||||||||||| ||||  |||||||||||||||||||    
T  43135419 gtaaatgatgaatttgcgaacatactcacaacatccaagttaataaca 43135466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 43192188 - 43192231
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||| |||||||||||||  ||||||||||||||||    
T  43192188 taaaggatgaatctgcgaacaaactcagaacatccaagttaata 43192231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 273
Target Start/End: Complemental strand, 5047057 - 5046902
Alignment:
Q  119 aaaacaaaactataatcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaa 218  Q
    |||||||||| ||| ||||| ||| ||||||| ||  ||||||||||| ||  |||| || ||||| | ||||| | |||| ||| ||| | ||||||||    
T  5047057 aaaacaaaac-atattcattcatttaaattaaaag--tacatcaaatacaataacatgttcaacattactaaaaatataaatgataaatcttcgaacaaa 5046961  T
Q  219 ctcgaaacatccaagttaataaca----acgataaaatacctataaataatatgataaa 273  Q
    |||  | || ||||||||||||||    |||||||||| |||| |||||||||||||||    
T  5046960 ctcacatcacccaagttaataacatacaacgataaaatgcctacaaataatatgataaa 5046902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 13575947 - 13575989
Alignment:
Q  197 aaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||||||||||||||  |||||||| |||||||    
T  13575947 aaaggatgaatttgcgaacaaactcacaacatccatgttaata 13575989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 17019476 - 17019434
Alignment:
Q  197 aaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||||||||||||||  |||||||| |||||||    
T  17019476 aaaggatgaatttgcgaacaaactcacaacatccatgttaata 17019434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 17549913 - 17549871
Alignment:
Q  197 aaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||||||||||||||  |||||||| |||||||    
T  17549913 aaaggatgaatttgcgaacaaactcacaacatccatgttaata 17549871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 21238086 - 21238040
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatca 162  Q
    ||||||||||||| ||| ||||| ||||||||| |||||||||||||    
T  21238086 acaaaaacaaaacaatattcattcattcaaattgatagaatacatca 21238040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 29617065 - 29617111
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatca 162  Q
    |||||||||||| |||| ||||| ||||||||||| |||||||||||    
T  29617065 acaaaaacaaaattatattcattcattcaaattaaaagaatacatca 29617111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 31013466 - 31013549
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  31013466 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 31013549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 40618863 - 40618909
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatca 162  Q
    ||||||||||||| ||| ||||| ||||||||| |||||||||||||    
T  40618863 acaaaaacaaaacgatattcattcattcaaattgatagaatacatca 40618909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 12243954 - 12243999
Alignment:
Q  197 aaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||||||||| |||||||||||||  |||||||| ||||||||||    
T  12243954 aaaggatgaatctgcgaacaaactcacaacatccatgttaataaca 12243999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 24099114 - 24099192
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataacaacgataaaatacctataaataatatgataaaat 275  Q
    ||||||| ||||| |||||||||||||  |||||||||||||||| ||   ||||  | |||| |||||||||||||||||    
T  24099114 gtaaagggtgaatctgcgaacaaactcacaacatccaagttaatagca--tataatttgcctacaaataatatgataaaat 24099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 275
Target Start/End: Original strand, 26468947 - 26469088
Alignment:
Q  134 tcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaag 233  Q
    ||||| ||||||||||||  ||||||||| ||||||  ||||  |||||||   |||||  ||||| | ||||| ||  || ||||||  |||  | |||    
T  26468947 tcatttattcaaattaatgtaatacatcatatataataacatgattaacattgctaaaaacgtaaatggtgaatctgtaaataaactcacaacgcctaag 26469046  T
Q  234 ttaataacaacgataaaatacctataaataatatgataaaat 275  Q
    ||||| | ||||| |||||||||| |||||||||||||||||    
T  26469047 ttaattataacgacaaaatacctacaaataatatgataaaat 26469088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 2656114 - 2656070
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| |||||||||||||||||||||  | ||||||||||||||    
T  2656114 gtaaatgatgaatttgcgaacaaactcacagcatccaagttaata 2656070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 3240611 - 3240567
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||    
T  3240611 gtaaaggatgaatctgcgaataaactcacaacatccaagttaata 3240567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4809208 - 4809164
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  |||||| |||||||||    
T  4809208 gtaaaggatgaatctgcgaacaaactcacaacatctaagttaata 4809164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9619197 - 9619241
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  9619197 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 9619241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 29777463 - 29777419
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  29777463 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 29777419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 39152982 - 39153026
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  |||||| |||||||||    
T  39152982 gtaaaggatgaatctgcgaacaaactcttaacatctaagttaata 39153026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 44099776 - 44099820
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| ||| |||||||||  ||||||||||||||||    
T  44099776 gtaaaggatgaatctgctaacaaactcacaacatccaagttaata 44099820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 292
Target Start/End: Original strand, 31128634 - 31128742
Alignment:
Q  183 atcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataacaacgataaaatacctataaataatatgataaaatagaagta 282  Q
    |||| ||||| |||||||||| ||| |||||||||||||  ||||||||||||||| | ||||  ||||| |||| |||||||||||||||||| ||||     
T  31128634 atcactaaaaatgtaaaggattaatctgcgaacaaactcacaacatccaagttaat-ataacggcaaaatgcctacaaataatatgataaaatataagtc 31128732  T
Q  283 attgaaatac 292  Q
    | ||||||||    
T  31128733 actgaaatac 31128742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 6174064 - 6174010
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||||||||||||    
T  6174064 taaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaataaca 6174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 4228371 - 4228320
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| |||||||||||||| |||||||||||||  ||||||||||||||||    
T  4228371 taaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 4228320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 7558712 - 7558649
Alignment:
Q  176 atttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||| || |||||  |||||||||||||||||||||||||||  | ||||||||||||||    
T  7558712 atttaacaccactaaaaacgtaaaggatgaatttgcgaacaaactcatagcatccaagttaata 7558649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 30420917 - 30420866
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| |||||||||||||| |||||||||||||  ||||||||||||||||    
T  30420917 taaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 30420866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 37613946 - 37614013
Alignment:
Q  175 tatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    |||| ||||||  |||||| ||||||||||||| ||||||||||||||   |||||||||||||||||    
T  37613946 tattcaacatcgctaaaatagtaaaggatgaatctgcgaacaaactcggggcatccaagttaataaca 37614013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 12554042 - 12554125
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  12554042 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaatatcatacaacgacaaaatgcctacaaataatatgataaaa 12554125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 28037345 - 28037283
Alignment:
Q  176 atttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaat 238  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||  || || |||||||||    
T  28037345 atttaacatcgttaaaaatgtaaatgatgaatttgcgaacaaactcacaatatacaagttaat 28037283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 34128539 - 34128646
Alignment:
Q  189 aaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataacaa----cgataaaatacctataaataatatgataaaatagaagtaat 284  Q
    |||| |||||||| ||||| ||| ||||| |||  || ||||||||||||||||     ||| ||||| ||||||||||||||||||||||  |||||||    
T  34128539 aaaaatgtaaagggtgaatctgcaaacaacctcacaatatccaagttaataacatactgcgacaaaatgcctataaataatatgataaaatccaagtaat 34128638  T
Q  285 tgaaatac 292  Q
     |||||||    
T  34128639 cgaaatac 34128646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 33585581 - 33585679
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    |||||| ||||||  ||||||||||||| |||||||||||||  |||| |||||||||||    ||||||  ||||| | || ||||||||||||||||    
T  33585581 aacatcgttaaaaacgtaaaggatgaatatgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcatacaaataatatgataaaa 33585679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 41694933 - 41694776
Alignment:
Q  121 aacaaaactataatcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaact 220  Q
    |||||||| ||| | ||| ||||||||||||| | || |||| ||  ||  |||| || ||||||  |||||  ||||| |||||||||| |||||||||    
T  41694933 aacaaaacaatatttattcattcaaattaatatagtatatcatatgcaataacatgttcaacatcgctaaaaacgtaaatgatgaatttgtgaacaaact 41694834  T
Q  221 cgaaacatccaagttaataaca----acgataaaatacctataaataatatgataaaat 275  Q
      ||||| | ||||||||||||    |||| ||||| ||||||||||||||||||||||    
T  41694833 t-aaacaccaaagttaataacatataacgacaaaatgcctataaataatatgataaaat 41694776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9986182 - 9986226
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  9986182 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 9986226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 27248991 - 27249035
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  27248991 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 27249035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 40659772 - 40659816
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  40659772 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 40659816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 4904006 - 4904090
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
    ||||||| ||||| | |||||||||||  ||||||||||||||||    ||||||| |||||  ||| |||||||||||||||||    
T  4904006 gtaaaggctgaatctacgaacaaactcacaacatccaagttaatagcatacaacgacaaaatgtctacaaataatatgataaaat 4904090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 17319561 - 17319514
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||||||||||| |||||||||||||   ||||||||||||||||||    
T  17319561 gtaaaggatgaatctgcgaacaaactcacgacatccaagttaataaca 17319514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 32913488 - 32913437
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| ||||||||||||| |||||||| ||||  ||||||||||||||||    
T  32913488 taaaatcgtaaaggatgaatctgcgaacatactcacaacatccaagttaata 32913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 4779060 - 4779010
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaata 166  Q
    ||||||||||||||||| ||||| ||||||||  ||||| |||||||||||    
T  4779060 acaaaaacaaaactatattcattcattcaaatcgatagagtacatcaaata 4779010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 8885559 - 8885601
Alignment:
Q  247 taaaatacctataaataatatgataaaatagaagtaattgaaa 289  Q
    |||||||| ||||||||||||||||||||  ||||||||||||    
T  8885559 taaaatacatataaataatatgataaaatcaaagtaattgaaa 8885601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 11985094 - 11985177
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||| |||||||||||||||||| ||  ||||||||||||||||    |||||   ||||| |||| ||||||||||||||||    
T  11985094 gtaaatgatgaatttgcgaacaaattcacaacatccaagttaataggatacaacagcaaaatgcctacaaataatatgataaaa 11985177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 14423619 - 14423521
Alignment:
Q  144 aaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||| ||||||||||| |||||||| || || || ||||||  |||||   |||||| | ||| |||||| |||||| ||||| ||||||||||||||    
T  14423619 aaattgatagaatacataaaatataaacatatgttcaacatcgctaaaaacataaagggtaaatctgcgaataaactcaaaacacccaagttaataaca 14423521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 14955767 - 14955684
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
    |||||||||||| |||||||||||||  |||| | |||||||||    |||| ||||||||  ||| |||||||||||||||||    
T  14955767 taaaggatgaatctgcgaacaaactcacaacacctaagttaataacatacaatgataaaatgtctacaaataatatgataaaat 14955684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 28533800 - 28533899
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
    |||||| ||||||  ||||| | || || |||||||||||||  ||||  ||||||||||    ||||||| |||||||||| |||||||||||||||||    
T  28533800 aacatcgttaaaaacgtaaaaggtggatctgcgaacaaactcacaacactcaagttaatagcatacaacgacaaaatacctacaaataatatgataaaat 28533899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 37876399 - 37876449
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaata 166  Q
    ||||||||||||| ||| ||||| ||||||||| ||||| |||||||||||    
T  37876399 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaata 37876449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 37994590 - 37994544
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatca 162  Q
    ||||||||||||| ||| ||||| ||||||||| |||||||||||||    
T  37994590 acaaaaacaaaacgatattcattcattcaaattgatagaatacatca 37994544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 1421929 - 1421832
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| |||||  ||||||| ||||| ||| |||||||||  |||| |||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  1421929 aacatcactaaaaacgtaaagg-tgaatctgcaaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaa 1421832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 4903938 - 4903991
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaatataa 169  Q
    ||||||||||||| ||| ||||| ||| ||||| ||||| ||||||||||||||    
T  4903938 acaaaaacaaaacgatattcattcatttaaattgatagagtacatcaaatataa 4903991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 8971467 - 8971512
Alignment:
Q  194 tgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||    
T  8971467 tgtaaaggatgaatatgcgaacaaactcacagcatccaagttaata 8971512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 84021 - 84065
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  84021 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 84065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 8806107 - 8806063
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| ||||||||| |||  ||||||||||||||||    
T  8806107 gtaaaggatgaatctgcgaacaatctcacaacatccaagttaata 8806063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 17994587 - 17994631
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||| |||||||| |||||||||||||  ||||||||||||||||    
T  17994587 gtaacggatgaatatgcgaacaaactcacaacatccaagttaata 17994631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 18107549 - 18107690
Alignment:
Q  133 atcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaa 232  Q
    |||||| ||||||||| ||||| ||||||| ||||||  |||| || |  |||| |||||  ||||||  ||||| |||||||||||||  ||||  |||    
T  18107549 atcattcattcaaattgatagagtacatcacatataataacatgttcattatcactaaaaacgtaaagagtgaatatgcgaacaaactcacaacacgcaa 18107648  T
Q  233 gttaata----acaacgataaaatacctataaataatatgat 270  Q
    |||||||    | ||||| ||||| |||| ||||||||||||    
T  18107649 gttaataatataaaacgacaaaatgcctacaaataatatgat 18107690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 27477397 - 27477345
Alignment:
Q  187 ttaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| |||||| ||||||| |||||||| ||||  ||||||||||||||||    
T  27477397 ttaaaaatgtaaatgatgaatctgcgaacatactcacaacatccaagttaata 27477345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 34600455 - 34600411
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| || ||||||||||| | ||||||||||||||    
T  34600455 gtaaaggatgaatctgtgaacaaactcgcatcatccaagttaata 34600411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 36234239 - 36234195
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| || ||||||||||  ||||||||||||||||    
T  36234239 gtaaaggatgaatctgtgaacaaactcacaacatccaagttaata 36234195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 30608360 - 30608465
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
    |||||| ||||||  ||||||||||||||||| ||||| |||  ||||||||||||||||    |||||| |||||| |||| |||||||||||||||||    
T  30608360 aacatcgttaaaaacgtaaaggatgaatttgcaaacaatctcacaacatccaagttaatagcatacaacggtaaaatgcctacaaataatatgataaaat 30608459  T
Q  276 agaagt 281  Q
    | ||||    
T  30608460 ataagt 30608465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 12059613 - 12059657
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  12059613 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 12059657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 20226080 - 20225999
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaa 273  Q
    |||| |||||||||||||||||||||  || | |||||||||||    ||||||| ||||| |||| |||||||||||||||    
T  20226080 taaatgatgaatttgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaa 20225999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 22120064 - 22119983
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaa 273  Q
    |||| |||||||||||||||||||||  || | |||||||||||    ||||||| ||||| |||| |||||||||||||||    
T  22120064 taaatgatgaatttgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaa 22119983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 25064473 - 25064429
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  25064473 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 25064429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 1450573 - 1450636
Alignment:
Q  175 tatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaat 238  Q
    ||||||||||||||||||   |||| ||| |||||||||||||||||  ||||| |||||||||    
T  1450573 tatttaacatcattaaaaacataaatgataaatttgcgaacaaactcacaacatacaagttaat 1450636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 8196240 - 8196291
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| ||||||||||||||||||||||| ||||  | ||||||||||||||    
T  8196240 taaaaatgtaaaggatgaatttgcgaacacactcacagcatccaagttaata 8196291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 17346343 - 17346434
Alignment:
Q  144 aaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagtt 235  Q
    ||||| ||||| ||||||||||| |||||||||||  |||||  |||||  ||||| ||||||| || ||||||| ||  ||||||||||||    
T  17346343 aaattgatagagtacatcaaatacaaccacatattctacatcgctaaaaacgtaaaagatgaatatgtgaacaaattcacaacatccaagtt 17346434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 30879594 - 30879662
Alignment:
Q  211 cgaacaaactcgaaacatccaagttaataaca----acgataaaatacctataaataatatgataaaat 275  Q
    |||||||||||  | |||||||||||||||||    |||| |||||||| |||||||||||||||||||    
T  30879594 cgaacaaactcacatcatccaagttaataacatataacgacaaaataccaataaataatatgataaaat 30879662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 32802727 - 32802692
Alignment:
Q  240 acaacgataaaatacctataaataatatgataaaat 275  Q
    |||||||||||||||||| |||||||||||||||||    
T  32802727 acaacgataaaatacctacaaataatatgataaaat 32802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 67861 - 67944
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  | || |||||||||||    ||||||  ||||| |||||||||||||||||||||    
T  67861 gtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctataaataatatgataaaa 67944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 9341511 - 9341594
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||| ||||| |||| ||| ||||||||||||    
T  9341511 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaacaatatgataaaa 9341594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 275
Target Start/End: Complemental strand, 9380260 - 9380169
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
    ||||| |||||| | ||||| |||||||||||||  |||||||||| |||||    ||||||| ||||| | || |||||||||||||||||    
T  9380260 taaaaatgtaaatggtgaatatgcgaacaaactcacaacatccaagataatagaatacaacgacaaaatgcatacaaataatatgataaaat 9380169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 31297117 - 31297071
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatca 162  Q
    ||||||||||||| ||| ||||| ||||||||| |||||||||||||    
T  31297117 acaaaaacaaaacgatattcattcattcaaattgatagaatacatca 31297071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 33052960 - 33053010
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaata 166  Q
    ||||||||||||| ||| ||||| ||||||||| ||||| |||||||||||    
T  33052960 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaata 33053010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 33053028 - 33053111
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  | ||||||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  33053028 gtaaagggtgaatatgcgaacaaactcacagcatccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 33053111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 8027958 - 8028002
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||||||||||||||||  | |||| |||||||||    
T  8027958 gtaaaggatgaatttgcgaacaaactcacatcatcaaagttaata 8028002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 8497205 - 8497161
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  8497205 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 8497161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 12653177 - 12653137
Alignment:
Q  199 aggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||| |||||||||||||  ||||||||||||||||    
T  12653177 aggatgaatctgcgaacaaactcacaacatccaagttaata 12653137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 17237126 - 17237170
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||| ||||  ||||||||||||||||    
T  17237126 gtaaaggatgaatctgcgaacacactcacaacatccaagttaata 17237170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 17334990 - 17334946
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| ||||||| |||||||||||||  ||||||||||||||||    
T  17334990 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaata 17334946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 23947157 - 23947201
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| | |||||||||||  ||||||||||||||||    
T  23947157 gtaaaggatgaatctacgaacaaactcacaacatccaagttaata 23947201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 31297050 - 31296965
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaata 276  Q
    ||||||| ||||  ||||||||||||| || ||||||| ||||||    ||||||| ||||| |||| ||| ||||||||||||||    
T  31297050 gtaaagggtgaaaatgcgaacaaactcaaatcatccaaattaatagcatacaacgacaaaatgcctacaaacaatatgataaaata 31296965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 32327080 - 32327160
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca-acgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  | || ||||||||||| || |||  ||||| |||| ||||||||||||||||    
T  32327080 gtaaagggtgaatatgcgaacaaactcacagcacccaagttaatagcatacggcaaaatgcctacaaataatatgataaaa 32327160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 35001827 - 35001783
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||| ||| |||||||||||||  ||||||||||||||||    
T  35001827 gtaaaggattaatctgcgaacaaactcacaacatccaagttaata 35001783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 53508449 - 53508370
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaataacaacgataaaatacctataaataatatgataaaat 275  Q
    |||||| ||||| |||||||||| ||  |||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  53508449 taaagggtgaatctgcgaacaaaatcacaacatccaagttaatagcaacgacaaaatgcctacaaataatatgataaaat 53508370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 25631359 - 25631413
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||| |||||||||||||| |||||||||||||  | |||||||||||||||||    
T  25631359 taaaaatgtaaaggatgaatctgcgaacaaactcacatcatccaagttaataaca 25631413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 43564491 - 43564545
Alignment:
Q  145 aattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaa 199  Q
    |||||||| |||||||||||||||| ||||||||||||||  |||||| ||||||    
T  43564491 aattaataaaatacatcaaatataaacacatatttaacattgttaaaaatgtaaa 43564545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 48650587 - 48650677
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||| |||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  48650587 taaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 48650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 50194195 - 50194239
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  50194195 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 50194239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 628783 - 628863
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgata 271  Q
    ||||||||||||| |||||||||||||  |||| |||||||||||    ||||||  ||||| |||| |||||||||||||    
T  628783 gtaaaggatgaatctgcgaacaaactcacaacacccaagttaatagaatacaacggcaaaatgcctacaaataatatgata 628863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 30648560 - 30648603
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||| |||||||||||||  ||||||||||||||||    
T  30648560 taaaggatgaatctgcgaacaaactcacaacatccaagttaata 30648603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 40487545 - 40487470
Alignment:
Q  203 tgaatttgcgaacaaactcgaaacatccaagttaataaca----acgataaaatacctataaataatatgataaaa 274  Q
    |||||||||||||||||||  |||| ||||||||||||||    |||  ||||| |||| ||||||||||||||||    
T  40487545 tgaatttgcgaacaaactcacaacacccaagttaataacatataacggcaaaatgcctacaaataatatgataaaa 40487470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 47896447 - 47896397
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaata 166  Q
    ||||||||||||| ||| ||||||||||||||| ||||| ||||| |||||    
T  47896447 acaaaaacaaaacgatattcattgattcaaattgatagagtacattaaata 47896397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 52922977 - 52923060
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  | || |||||||||||    |||||| |||||| |||| ||||||||||||||||    
T  52922977 gtaaagggtgaatctgcgaacaaactcacagcagccaagttaatagcatacaacggtaaaatgcctacaaataatatgataaaa 52923060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 2342682 - 2342637
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataa 240  Q
    ||||||||||||| |||||||||||||  | |||||||||||||||    
T  2342682 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaataa 2342637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 4711709 - 4711627
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    |||||||||||| ||| |||||||||  |||| |||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  4711709 taaaggatgaatctgcaaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 4711627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 12050501 - 12050591
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||| |||||||| |||||||||||||||||||  |  || ||||||||||    ||||||| ||||| | || ||||||||||||||||    
T  12050501 taaaaatgtaaagggtgaatttgcgaacaaactcacactattcaagttaataacatacaacgacaaaatgcttacaaataatatgataaaa 12050591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 628716 - 628764
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaa 164  Q
    ||||||||||||  ||| ||||| ||||||||| |||||||||||||||    
T  628716 acaaaaacaaaatgatattcattcattcaaattgatagaatacatcaaa 628764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 3848759 - 3848803
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  3848759 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 3848803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 14464744 - 14464700
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||| |||||||| |||||||||||||  ||||||||||||||||    
T  14464744 gtaacggatgaatctgcgaacaaactcagaacatccaagttaata 14464700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 25162670 - 25162626
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||  ||||||||||||  ||||||||||||||||    
T  25162670 gtaaaggatgaatccgcgaacaaactcacaacatccaagttaata 25162626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 32607703 - 32607659
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  |||||||| |||||||    
T  32607703 gtaaaggatgaatctgcgaacaaactcacaacatccaggttaata 32607659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 36906356 - 36906312
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  36906356 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaata 36906312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 44907239 - 44907283
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||| ||||||    
T  44907239 gtaaaggatgaatctgcgaacaaactcacaacatccaaattaata 44907283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 46934873 - 46934829
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| | |||||||||||  ||||||||||||||||    
T  46934873 gtaaaggatgaatctacgaacaaactcacaacatccaagttaata 46934829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 31919221 - 31919138
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    ||||||| |||||  ||| ||||||||||||||||    
T  31919221 gtaaaggatgaatctgcgaacaaactcgcaacatccaagttaatagcatacaacgacaaaatgtctacaaataatatgataaaa 31919138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 15431526 - 15431610
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
    ||||||||||||| |||||||||||||  ||||||||||| ||||    |||||||||||||  ||| |||||||||||||||||    
T  15431526 gtaaaggatgaatctgcgaacaaactcacaacatccaagtgaatagcatacaacgataaaatgtctacaaataatatgataaaat 15431610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 48217685 - 48217634
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  48217685 taaaaatgtaaaggatgaatttgcgaacaaactcacaacatccaagttaata 48217634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 6217704 - 6217767
Alignment:
Q  216 aaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
    ||||||||||||||||||||||||    |||||| ||||||||||| |||||||||||||||||    
T  6217704 aaactcgaaacatccaagttaatagcatacaacggtaaaatacctacaaataatatgataaaat 6217767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 180 - 292
Target Start/End: Original strand, 799677 - 799791
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca-acgat--aaaatacctataaataatatgataaaata 276  Q
    |||||||||||||  ||||| ||||||| || ||||||||||| |||||| | ||||||| || || ||  |||||| ||| |||||||||||||||||     
T  799677 aacatcattaaaaacgtaaatgatgaatatgtgaacaaactcgcaacatcta-gttaatagcatacaatgaaaaatatctacaaataatatgataaaatt 799775  T
Q  277 gaagtaattgaaatac 292  Q
    ||||||| ||||||||    
T  799776 gaagtaagtgaaatac 799791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 13144657 - 13144716
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| |||||| |||||||| ||||| |||||||||||||  ||||||||||||||||    
T  13144657 aacatcgttaaaaatgtaaagggtgaatctgcgaacaaactcacaacatccaagttaata 13144716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 38520360 - 38520419
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||| |||||  |||||||||||||||| ||||||||||  ||||||||||||||||    
T  38520360 aacatcactaaaaacgtaaaggatgaatttgtgaacaaactcacaacatccaagttaata 38520419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 51868485 - 51868532
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||    
T  51868485 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaataaca 51868532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 5701500 - 5701456
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  5701500 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 5701456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 11454178 - 11454134
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  11454178 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 11454134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 275
Target Start/End: Complemental strand, 14489563 - 14489420
Alignment:
Q  135 cattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagt 234  Q
    |||| |||||||||| ||||||| |||||||| ||  ||||  ||||||||  |||||  ||||||| ||||| ||| || ||||||  || | ||||||    
T  14489563 catttattcaaatta-tagaatatatcaaatacaatgacatgattaacatcgctaaaaacgtaaagggtgaatatgctaataaactctcaatacccaagt 14489465  T
Q  235 taataaca----acgataaaatacctataaataatatgataaaat 275  Q
    ||||||||    || | |||||||||| |||||||||||||||||    
T  14489464 taataacatacaacaacaaaatacctacaaataatatgataaaat 14489420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 27456731 - 27456672
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| ||||||  ||||| |||||||||||||||||||||  |||| |||||||||||    
T  27456731 aacatcgttaaaaacgtaaaagatgaatttgcgaacaaactcacaacacccaagttaata 27456672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 35584462 - 35584505
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaat 238  Q
    |||||||||||||||||||||||||||  | |||||||||||||    
T  35584462 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaat 35584505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 48809110 - 48809179
Alignment:
Q  226 catccaagttaataacaacgat---aaaatacctataaataatatgataaaatagaagtaattgaaatac 292  Q
    ||||||||| ||||||||| ||   ||||||||||||||||||||||||||||  |||| | ||||||||    
T  48809110 catccaagtgaataacaacaatgacaaaatacctataaataatatgataaaattaaagtgactgaaatac 48809179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 14872871 - 14872788
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  | ||||||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  14872871 gtaaagggtgaatatgcgaacaaactcacagcatccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 14872788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 19061140 - 19061061
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgata 271  Q
    |||| ||||||| |||||||||||||  ||||||||||||||||    ||||||  ||||| |||| |||||||||||||    
T  19061140 taaaagatgaatgtgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataatatgata 19061061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 24583385 - 24583298
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgata 271  Q
    ||||| |||||||||||||| |||||||||||||  | || |||||||||||    ||||||  ||||| |||| |||||||||||||    
T  24583385 taaaaatgtaaaggatgaatctgcgaacaaactcacatcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgata 24583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 35461899 - 35461992
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataacaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||| ||||| |||||| ||||||  | || |||||||||||  |  || ||||||||||| |||||||||||||||    
T  35461899 aacatcactaaaaatgtaaagggtgaatctgcgaataaactcacagcacccaagttaatag-acggacaaaatacctattaataatatgataaaa 35461992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 47133202 - 47133156
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatca 162  Q
    ||||||||||||| ||| ||||| ||||||||| |||||||||||||    
T  47133202 acaaaaacaaaacgatattcattcattcaaattgatagaatacatca 47133156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 5984067 - 5983985
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    |||||| ||||| |||||||||||||  | || |||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  5984067 taaagggtgaatatgcgaacaaactcacatcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaa 5983985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 13969378 - 13969423
Alignment:
Q  197 aaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||||||||| |||||||||||||  |||||||| ||||||||||    
T  13969378 aaaggatgaatctgcgaacaaactcacaacatccatgttaataaca 13969423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 15312357 - 15312402
Alignment:
Q  197 aaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||||||||| |||||||||||||  |||||||| ||||||||||    
T  15312357 aaaggatgaatctgcgaacaaactcacaacatccatgttaataaca 15312402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 7342963 - 7342919
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  7342963 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 7342919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 9172731 - 9172687
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  9172731 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaata 9172687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 9180713 - 9180669
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  9180713 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaata 9180669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9687045 - 9687089
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  9687045 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaata 9687089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 39927396 - 39927440
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaataa 240  Q
    |||||||||||| |||||||||||||  ||||||||| |||||||    
T  39927396 taaaggatgaatatgcgaacaaactcacaacatccaaattaataa 39927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 45805669 - 45805713
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  45805669 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaata 45805713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 47133135 - 47133091
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||| ||| |||||||||||||  ||||||||||||||||    
T  47133135 gtaaaggataaatctgcgaacaaactcacaacatccaagttaata 47133091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 50165939 - 50165983
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| || ||||||||||  ||||||||||||||||    
T  50165939 gtaaaggatgaatctgtgaacaaactcacaacatccaagttaata 50165983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 51872104 - 51872060
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  51872104 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 51872060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 11976788 - 11976878
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca----acgataaaatacctataaataatatgataaaa 274  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||||||||||||    |||  ||||| |||| ||||||||||||||||    
T  11976788 taaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacataaaacgggaaaatgcctacaaataatatgataaaa 11976878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 26877969 - 26878052
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata---acaacgataaaatacctataaataatatgataaaat 275  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||   ||||||| ||| | |||| |||||||||||||||||    
T  26877969 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagatacaacgacaaagtgcctacaaataatatgataaaat 26878052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 34945621 - 34945538
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||| ||||| |||||||||||||||||||||    
T  34945621 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctataaataatatgataaaa 34945538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 43148973 - 43148922
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| |||||||||||||| |||||||||||||  ||||||||||||||||    
T  43148973 taaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 43148922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 9425275 - 9425372
Alignment:
Q  144 aaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||| ||||||||||| ||||||||| | | ||||| | ||||||||| |  |||||| |||| |||||||||||||  | |||||||||||||||||    
T  9425275 aaattgatagaatacattaaatataacaaaaaatttatc-tcattaaaaataaaaaggacgaatatgcgaacaaactcacatcatccaagttaataaca 9425372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 13422161 - 13422058
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaatagaagtaattgaaat 290  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    | ||||  ||||| |||| | |||||||||||||||| |||| |  |||||    
T  13422161 gtaaaggatgaatatgcgaacaaactcacaacatccaagttaatagcataaaacggaaaaatgcctacatataatatgataaaatataagtcaccgaaat 13422062  T
Q  291 acac 294  Q
    ||||    
T  13422061 acac 13422058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 38598025 - 38597942
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| |||||||||||||||||||  |||| |||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  38598025 gtaaagggtgaatttgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 38597942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 3271242 - 3271286
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  3271242 gtaaaggatgaatctgcgaacaaactcataacatccaagttaata 3271286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 8984781 - 8984829
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaa 164  Q
    ||||||||||||| ||| ||||| ||||||||| |||||||||||||||    
T  8984781 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcaaa 8984829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 11875608 - 11875525
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataacaacgataaaatacctataaataatatgataaaatagaagt 281  Q
    ||||| ||||||| |||||||||||||  ||||| |||||  |   || ||||||||| |||||||||||||||||||||| |||||    
T  11875608 gtaaatgatgaatctgcgaacaaactcacaacatacaagtaca---cagcgataaaatgcctataaataatatgataaaattgaagt 11875525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 281
Target Start/End: Original strand, 8514469 - 8514602
Alignment:
Q  150 atagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacg 245  Q
    ||||| || |||||||| |||||||||||||| |||| ||||| |||||| |||  |||||| |||||| |   || ||| |||||||||    ||||||    
T  8514469 atagagtatatcaaatacaaccacatatttaatatcactaaaaatgtaaaagat--atttgcaaacaaattaataaaatcaaagttaataacatacaacg 8514566  T
Q  246 ataaaatacctataaataatatgataaaatagaagt 281  Q
    | ||||||  || |||||||||||||||||| ||||    
T  8514567 acaaaatatttacaaataatatgataaaataaaagt 8514602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 14082257 - 14082357
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaatagaagtaattgaaata 291  Q
    |||||| ||||| |||||||||||||  | |||| |||||||||    ||||||| ||||| |||| ||||||||||||||||   |||| |||||||||    
T  14082257 taaagggtgaatctgcgaacaaactcccatcatcgaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaagtcattgaaata 14082356  T
Q  292 c 292  Q
    |    
T  14082357 c 14082357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 31391614 - 31391657
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| |||||||||||||||||||  ||||||||||||||||    
T  31391614 taaagggtgaatttgcgaacaaactcacaacatccaagttaata 31391657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 9113585 - 9113668
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  9113585 gtaaagggtgaatctgcgaacaaactcagaacacccaagttaatagcatacaacggaaaaatgcctacaaataatatgataaaa 9113668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 13007525 - 13007475
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaata 166  Q
    ||||||||||||| ||| ||||| ||||||||| ||||| |||||||||||    
T  13007525 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaata 13007475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 14726306 - 14726404
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| |||||  ||||||| ||||| || ||||||||||  | ||||||||||||||    | ||||| ||||| |||| ||||||||||||||||    
T  14726306 aacatcactaaaaacgtaaagggtgaatctgtgaacaaactcacagcatccaagttaatattataaaacgacaaaatgcctacaaataatatgataaaa 14726404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 28235827 - 28235782
Alignment:
Q  194 tgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| ||||||| |||||||||||||  ||||||||||||||||    
T  28235827 tgtaaatgatgaatctgcgaacaaactcacaacatccaagttaata 28235782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 7242023 - 7241979
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  7242023 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 7241979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 7247198 - 7247154
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  7247198 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 7247154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 8772021 - 8772065
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||||||| |||||||||  | ||||||||||||||    
T  8772021 gtaaaggatgaatttgcaaacaaactcatagcatccaagttaata 8772065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 8984845 - 8984889
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||| ||| |||||||||||||  ||||||||||||||||    
T  8984845 gtaaaggattaatctgcgaacaaactcacaacatccaagttaata 8984889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 16981531 - 16981487
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||| |||||| |||||||||||||  ||||||||||||||||    
T  16981531 gtaaagaatgaatctgcgaacaaactcacaacatccaagttaata 16981487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 30299083 - 30299039
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||| ||||  ||||||||||||||||    
T  30299083 gtaaaggatgaatctgcgaacatactcagaacatccaagttaata 30299039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 41184280 - 41184324
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  41184280 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 41184324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 43008155 - 43008199
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||| |||||| ||||||||||  ||||||||||||||||    
T  43008155 gtaaaggataaatttgagaacaaactcataacatccaagttaata 43008199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 32521761 - 32521816
Alignment:
Q  187 ttaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataaca 242  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||||||    
T  32521761 ttaaaatcgtaaaggatgaatttgtgaacaaactcacaacatccaagttaataaca 32521816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 275
Target Start/End: Original strand, 4999810 - 4999973
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaatttgcgaac 215  Q
    ||||||||||||| ||| ||||| ||||||||||||| |||| |||| ||| ||  ||||  | ||||||  |||||   ||||| ||||||  |||||     
T  4999810 acaaaaacaaaacgatattcattcattcaaattaatataatatatcagatacaataacatcatcaacatcgataaaaacataaagaatgaataagcgaat 4999909  T
Q  216 aaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaat 275  Q
     |||||| |||| |||||| ||||    ||||||| |||||  |||||||||||||||||||||    
T  4999910 gaactcgcaacacccaagtcaataacatacaacgaaaaaatgtctataaataatatgataaaat 4999973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 40993388 - 40993305
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  40993388 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaacgacaaaatgcctacaaataatatgataaaa 40993305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 41553228 - 41553274
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatca 162  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  41553228 acaaaaacaaaacgatattcattcattcaaattaatagaatacatca 41553274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 13796802 - 13796872
Alignment:
Q  208 ttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||||||||||  ||||||||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  13796802 ttgcgaacaaactcacaacatccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaa 13796872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 433531 - 433575
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  433531 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 433575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 19404610 - 19404661
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| |||||||||||||| |||||||||||||  | ||||||||||||||    
T  19404610 taaaaatgtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 19404661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 8001406 - 8001489
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  | || |||||||||||    ||||||  ||||| |||||||||||||||||||||    
T  8001406 gtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctataaataatatgataaaa 8001489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 11654110 - 11654060
Alignment:
Q  116 acaaaaacaaaactataatcattgattcaaattaatagaatacatcaaata 166  Q
    |||||| |||||| ||| ||||| ||||||||| |||||||||||||||||    
T  11654110 acaaaagcaaaacaatattcattcattcaaattgatagaatacatcaaata 11654060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 34899467 - 34899550
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  ||||||||||||||||    ||||||  ||||| | || ||||||||||||||||    
T  34899467 gtaaagggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcatacaaataatatgataaaa 34899550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 48061653 - 48061570
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||    ||||||  ||||| |||| ||||||||||||||||    
T  48061653 gtaaagggtgaatctgcgaacaaactcataacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 48061570  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 22927703 - 22927736
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactc 221  Q
    ||||| ||||||||||||||||||||||||||||    
T  22927703 taaaaatgtaaaggatgaatttgcgaacaaactc 22927736  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 24351222 - 24351177
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaataa 240  Q
    ||||||||||||| |||||||||||||  | |||||||||||||||    
T  24351222 gtaaaggatgaatctgcgaacaaactcatagcatccaagttaataa 24351177  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 273
Target Start/End: Original strand, 31481887 - 31482041
Alignment:
Q  124 aaaactataatcattgattcaaattaatagaatacatcaaatataaccacatatttaacatcattaaaattgtaaaggatgaat-ttgcgaacaaactcg 222  Q
    ||||| ||| ||||| ||||||||| ||||||||||||| ||| ||  ||||  | |||||  ||||||  |||||| |||||| ||||||||||||       
T  31481887 aaaacgatattcattcattcaaattgatagaatacatcatatacaataacatgatcaacattgttaaaagcgtaaagaatgaatcttgcgaacaaacata 31481986  T
Q  223 aaacatccaagttaata----acaacgataaaatacctataaataatatgataaa 273  Q
     |||| |||||||||||    ||||||  ||||||| ||||||||| ||||||||    
T  31481987 caacacccaagttaatagcatacaacggcaaaatacttataaataacatgataaa 31482041  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 42311515 - 42311473
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||||||||||||||||  | ||||||||||||||    
T  42311515 gtaaaggatgaatttgcgaacaaactc--agcatccaagttaata 42311473  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 274
Target Start/End: Original strand, 48316673 - 48316755
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    |||||| ||||| |||||||||||||  | || |||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  48316673 taaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaa 48316755  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 7640615 - 7640659
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| ||||||| |||||||||||||  ||||||||||||||||    
T  7640615 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaata 7640659  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 17222841 - 17222881
Alignment:
Q  196 taaaggatgaatttgcgaacaaactcgaaacatccaagtta 236  Q
    |||||||||||| |||||||||||||  |||||||||||||    
T  17222841 taaaggatgaatctgcgaacaaactcacaacatccaagtta 17222881  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 28407712 - 28407760
Alignment:
Q  118 aaaaacaaaactataatcattgattcaaattaatagaatacatcaaata 166  Q
    ||||||||||| ||| ||||| ||||||||| ||||| |||||||||||    
T  28407712 aaaaacaaaacgatattcattcattcaaattgatagagtacatcaaata 28407760  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 45198873 - 45198917
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||| ||||  ||||||||||||||||    
T  45198873 gtaaaggatgaatctgcgaacatactcacaacatccaagttaata 45198917  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 46822252 - 46822208
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||    
T  46822252 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaata 46822208  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 65895 - 65985
Alignment:
Q  188 taaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata----acaacgataaaatacctataaataatatgataaaa 274  Q
    ||||| |||||||| ||||| |||||||||||||  ||||  ||||||||||    ||||||| ||||| |||| ||||||||||||||||    
T  65895 taaaaatgtaaagggtgaatctgcgaacaaactcataacactcaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaa 65985  T

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Target: scaffold0219 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 14716 - 14775
Alignment:
Q  180 aacatcattaaaattgtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||||| ||||| | ||||||||||||||||||||||||||  | || |||||||||||    
T  14716 aacatcactaaaaatataaaggatgaatttgcgaacaaactcacagcacccaagttaata 14775  T

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Target: scaffold0150 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 10067 - 10109
Alignment:
Q  197 aaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    |||||||||||||||||||||||||  |||||||| |||||||    
T  10067 aaaggatgaatttgcgaacaaactcacaacatccatgttaata 10109  T

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Target: scaffold0262 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 1728 - 1780
Alignment:
Q  240 acaacgataaaatacctataaataatatgataaaatagaagtaattgaaatac 292  Q
    |||||| |||||| |||| |||||||||||||||||| |||| || |||||||    
T  1728 acaacggtaaaatgcctacaaataatatgataaaatataagtcatcgaaatac 1780  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 83276 - 83320
Alignment:
Q  195 gtaaaggatgaatttgcgaacaaactcgaaacatccaagttaata 239  Q
    ||||| ||||||| |||||||||||||  ||||||||||||||||    
T  83276 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaata 83320  T

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