View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3237_high_95 (Length: 271)
Name: NF3237_high_95
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3237_high_95 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 7 - 254
Target Start/End: Original strand, 30400590 - 30400837
Alignment:
| Q |
7 |
acacctttactttatctctgcctattttcttctcccacaaagaatgatgatgggagtatcttcaacaactgcaacattctttctcatagtggcacctttg |
106 |
Q |
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| T |
30400590 |
acacctttactttatctctgcccattttcttctcccacaaagaatgatgatgggagtatcttcaacaactgcaacattctttctcatagttgcacctttg |
30400689 |
T |
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| Q |
107 |
gtgcttctatggacatggaagctactgaattggctatggctaaggccaaagagaatagaaaaggtactgagagaacaaggccttcaaggcaatccataca |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |
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| T |
30400690 |
gtgcttctatggacatggaagctactgaattggctatggctaaggccaaagagaatagagaaggtactgagagcacaaggccttcaaggcagtccataca |
30400789 |
T |
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| Q |
207 |
aaattttggttggagacacaagggagatgattaagatgatgatggaaa |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30400790 |
aaattttggttggagacacaagggagatgattaagatgatgatggaaa |
30400837 |
T |
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