View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3237_high_97 (Length: 268)
Name: NF3237_high_97
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3237_high_97 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 24 - 251
Target Start/End: Complemental strand, 26381058 - 26380831
Alignment:
| Q |
24 |
gccaacaatgaattattgcactcatttttcatgtcattctcttgaaagataaaactattatcacatttaaaagccactggttcctcaataggtctagtag |
123 |
Q |
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| T |
26381058 |
gccaacaatgaattattgcactcatttttcatgtcattctcttgaaagataaaactattatcacatttaaaagccactggttcctcaataggtctagtag |
26380959 |
T |
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| Q |
124 |
gataaagagattgaggaagctgttgaagtcccctattggaaggaaaataaagtggtgttgaaggaacattgtttacatttggagtagtagtgtacatgat |
223 |
Q |
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| T |
26380958 |
gataaagagattgaggaagctgttgaagtcccctattagaaggaaaataaagtggtgttgaaggaacattgtttacatttggagtagtagtgtacatgat |
26380859 |
T |
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| Q |
224 |
aggatttgttgtaacatcccatgatcct |
251 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
26380858 |
aggatttgttgtaacatcccatgatcct |
26380831 |
T |
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